View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1641-INSERTION-3 (Length: 178)
Name: NF1641-INSERTION-3
Description: NF1641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1641-INSERTION-3 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 96; Significance: 2e-47; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 19010418 - 19010573
Alignment:
| Q |
8 |
ggtcctttggtgttcaaaattggccagcaggaaaaacattcaaggctggtgacacactcggtaagaatcatacaattatttaacatacaattatcatttg |
107 |
Q |
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| T |
19010418 |
ggtcctttggtgttcaaaattggcctgcaggaaaaacattcaaggctggtgacacactcggtaagaat---------------catacaattatcatttg |
19010502 |
T |
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| Q |
108 |
tttacaacatctttttaaatttttgtgtnnnnnnntcaatttaggttcatccttgacattttaatttttat |
178 |
Q |
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| T |
19010503 |
tttacaacatctttttaaatttttgtgtaaaaaaatcaatttaggttcatccttgacattttaatttttat |
19010573 |
T |
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