View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1641-INSERTION-5 (Length: 696)

Name: NF1641-INSERTION-5
Description: NF1641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1641-INSERTION-5
NF1641-INSERTION-5
[»] chr2 (41 HSPs)
chr2 (52-318)||(26895227-26895493)
chr2 (52-318)||(26900666-26900932)
chr2 (55-319)||(21244732-21244996)
chr2 (55-321)||(19803015-19803282)
chr2 (55-290)||(22702022-22702257)
chr2 (89-321)||(24782701-24782931)
chr2 (103-310)||(10898572-10898778)
chr2 (75-318)||(19357111-19357350)
chr2 (110-318)||(5984448-5984653)
chr2 (104-318)||(18390017-18390229)
chr2 (197-319)||(2524520-2524640)
chr2 (89-248)||(27039742-27039900)
chr2 (101-323)||(25084458-25084677)
chr2 (104-243)||(14692629-14692767)
chr2 (193-318)||(22670861-22670984)
chr2 (197-318)||(17305490-17305609)
chr2 (197-316)||(23759617-23759734)
chr2 (197-319)||(24514248-24514368)
chr2 (197-319)||(36838186-36838306)
chr2 (197-318)||(28654482-28654601)
chr2 (160-319)||(5033225-5033384)
chr2 (238-320)||(19665301-19665383)
chr2 (119-318)||(25044328-25044526)
chr2 (238-321)||(19664342-19664425)
chr2 (197-312)||(22253517-22253630)
chr2 (264-318)||(27058486-27058539)
chr2 (237-290)||(12629640-12629693)
chr2 (238-278)||(6262921-6262961)
chr2 (238-278)||(18872910-18872950)
chr2 (238-278)||(21078113-21078153)
chr2 (284-318)||(44070823-44070857)
chr2 (238-278)||(9239973-9240013)
chr2 (93-231)||(18391815-18391949)
chr2 (238-272)||(13102536-13102570)
chr2 (284-318)||(22258232-22258266)
chr2 (284-318)||(24740478-24740512)
chr2 (17-46)||(19803174-19803203)
chr2 (17-46)||(22702149-22702178)
chr2 (285-318)||(24783125-24783158)
chr2 (17-46)||(26895382-26895411)
chr2 (17-46)||(26900821-26900850)
[»] chr7 (48 HSPs)
chr7 (55-321)||(14189998-14190264)
chr7 (55-318)||(13254286-13254547)
chr7 (55-321)||(15212455-15212720)
chr7 (55-319)||(48742219-48742483)
chr7 (80-318)||(14192781-14193019)
chr7 (100-318)||(12370351-12370566)
chr7 (74-319)||(32996938-32997180)
chr7 (89-318)||(15121049-15121275)
chr7 (89-320)||(44372994-44373222)
chr7 (89-320)||(44381850-44382078)
chr7 (89-318)||(13151369-13151595)
chr7 (101-320)||(36706420-36706636)
chr7 (103-319)||(17131264-17131476)
chr7 (89-319)||(32435258-32435485)
chr7 (101-318)||(36687009-36687227)
chr7 (75-314)||(10660750-10660976)
chr7 (89-319)||(13700454-13700681)
chr7 (89-282)||(11065515-11065706)
chr7 (103-319)||(4070051-4070264)
chr7 (104-321)||(14220761-14220971)
chr7 (193-320)||(14552930-14553055)
chr7 (197-319)||(15718939-15719059)
chr7 (75-247)||(37786033-37786201)
chr7 (239-321)||(11092304-11092386)
chr7 (197-318)||(19280801-19280921)
chr7 (237-318)||(30822892-30822974)
chr7 (238-278)||(145787-145827)
chr7 (242-318)||(11084555-11084631)
chr7 (238-278)||(16004252-16004292)
chr7 (238-278)||(16110675-16110715)
chr7 (238-278)||(34956304-34956344)
chr7 (284-318)||(15578586-15578620)
chr7 (197-290)||(20584333-20584425)
chr7 (238-278)||(834744-834784)
chr7 (238-278)||(854785-854825)
chr7 (238-278)||(1199924-1199964)
chr7 (238-278)||(1212789-1212829)
chr7 (238-278)||(11659562-11659602)
chr7 (238-270)||(14419983-14420015)
chr7 (242-278)||(16252441-16252477)
chr7 (243-319)||(29003043-29003119)
chr7 (284-318)||(4692544-4692578)
chr7 (17-46)||(13254439-13254468)
chr7 (238-318)||(13890807-13890887)
chr7 (17-46)||(15212613-15212642)
chr7 (93-138)||(15623483-15623528)
chr7 (284-321)||(43746667-43746704)
chr7 (17-46)||(48742375-48742404)
[»] chr5 (31 HSPs)
chr5 (54-321)||(6555155-6555422)
chr5 (54-318)||(6554557-6554821)
chr5 (59-321)||(22468797-22469060)
chr5 (55-320)||(22359001-22359258)
chr5 (55-290)||(23537344-23537578)
chr5 (85-290)||(10815511-10815715)
chr5 (100-321)||(23540455-23540683)
chr5 (89-318)||(26760475-26760701)
chr5 (103-316)||(25251415-25251627)
chr5 (103-316)||(25315200-25315412)
chr5 (75-318)||(16226125-16226366)
chr5 (98-319)||(10952308-10952528)
chr5 (89-318)||(20564550-20564773)
chr5 (197-321)||(11898909-11899031)
chr5 (103-319)||(20470647-20470857)
chr5 (205-318)||(26748273-26748386)
chr5 (238-321)||(22338223-22338306)
chr5 (239-321)||(26833326-26833408)
chr5 (238-319)||(37806218-37806299)
chr5 (238-278)||(22748509-22748549)
chr5 (238-278)||(23114188-23114228)
chr5 (238-278)||(28372866-28372906)
chr5 (238-278)||(22334736-22334776)
chr5 (238-278)||(36448159-36448199)
chr5 (284-318)||(26645767-26645801)
chr5 (17-46)||(10815637-10815666)
chr5 (17-46)||(22359071-22359100)
chr5 (17-46)||(23537470-23537499)
chr5 (17-46)||(23540620-23540649)
chr5 (285-318)||(29913617-29913650)
chr5 (285-321)||(21619750-21619786)
[»] chr3 (54 HSPs)
chr3 (55-321)||(13027399-13027665)
chr3 (55-290)||(1990265-1990500)
chr3 (55-290)||(34853588-34853822)
chr3 (55-282)||(16326315-16326541)
chr3 (136-318)||(21081467-21081649)
chr3 (55-255)||(36526859-36527059)
chr3 (55-258)||(3265817-3266020)
chr3 (89-318)||(53647651-53647878)
chr3 (103-318)||(16727490-16727704)
chr3 (89-318)||(22308415-22308641)
chr3 (89-318)||(14440100-14440326)
chr3 (76-318)||(9643551-9643791)
chr3 (103-319)||(15025089-15025302)
chr3 (103-318)||(20416439-20416651)
chr3 (75-321)||(12507593-12507836)
chr3 (160-320)||(35066410-35066567)
chr3 (103-319)||(8492991-8493204)
chr3 (198-318)||(42328169-42328287)
chr3 (197-315)||(4874624-4874740)
chr3 (197-318)||(2843341-2843460)
chr3 (197-318)||(17325850-17325970)
chr3 (197-318)||(41174428-41174547)
chr3 (197-318)||(44268499-44268618)
chr3 (131-230)||(12513680-12513778)
chr3 (193-318)||(52312197-52312320)
chr3 (197-315)||(4852890-4853006)
chr3 (75-318)||(19574002-19574242)
chr3 (238-320)||(51609063-51609145)
chr3 (238-319)||(16840887-16840968)
chr3 (238-278)||(3801224-3801264)
chr3 (238-278)||(20250617-20250657)
chr3 (238-321)||(10556215-10556298)
chr3 (238-272)||(24341509-24341543)
chr3 (197-290)||(19885677-19885769)
chr3 (238-278)||(11911924-11911964)
chr3 (238-278)||(29546788-29546828)
chr3 (238-278)||(38313630-38313670)
chr3 (246-321)||(10952966-10953041)
chr3 (285-320)||(11561239-11561274)
chr3 (206-318)||(24554133-24554245)
chr3 (206-318)||(24557195-24557307)
chr3 (244-278)||(18898702-18898736)
chr3 (238-272)||(23172727-23172761)
chr3 (240-278)||(23273913-23273951)
chr3 (205-262)||(1209627-1209684)
chr3 (17-46)||(1990344-1990373)
chr3 (17-46)||(3265896-3265925)
chr3 (276-321)||(11887873-11887917)
chr3 (277-318)||(13178653-13178694)
chr3 (17-46)||(16326394-16326423)
chr3 (277-318)||(17206137-17206178)
chr3 (285-318)||(17259863-17259896)
chr3 (17-46)||(34853667-34853696)
chr3 (238-274)||(18879072-18879108)
[»] chr8 (41 HSPs)
chr8 (55-318)||(19878397-19878659)
chr8 (55-321)||(24977250-24977518)
chr8 (55-212)||(41682486-41682642)
chr8 (74-318)||(19664100-19664342)
chr8 (53-318)||(23946597-23946856)
chr8 (103-319)||(17216903-17217116)
chr8 (89-320)||(20180297-20180525)
chr8 (89-319)||(21398249-21398477)
chr8 (89-319)||(21792742-21792970)
chr8 (74-318)||(25849989-25850232)
chr8 (103-310)||(39696365-39696570)
chr8 (74-318)||(23417664-23417904)
chr8 (103-318)||(20453332-20453545)
chr8 (109-318)||(8463-8669)
chr8 (103-248)||(22585255-22585399)
chr8 (103-318)||(17908451-17908662)
chr8 (193-321)||(22333593-22333720)
chr8 (55-117)||(19881268-19881330)
chr8 (104-318)||(23888044-23888256)
chr8 (193-321)||(22242476-22242606)
chr8 (103-241)||(6103459-6103596)
chr8 (197-319)||(39937919-39938039)
chr8 (98-216)||(42267338-42267455)
chr8 (239-318)||(12576061-12576140)
chr8 (113-283)||(18759368-18759537)
chr8 (208-318)||(42267772-42267880)
chr8 (197-319)||(45118890-45119010)
chr8 (75-178)||(22243859-22243962)
chr8 (238-319)||(25066478-25066559)
chr8 (238-278)||(27943406-27943446)
chr8 (284-318)||(17980448-17980482)
chr8 (284-318)||(18821059-18821093)
chr8 (205-322)||(6574859-6574976)
chr8 (238-318)||(22261200-22261280)
chr8 (242-278)||(25648248-25648284)
chr8 (238-277)||(42561422-42561461)
chr8 (17-46)||(24977410-24977439)
chr8 (285-318)||(31724916-31724949)
chr8 (17-46)||(41682565-41682594)
chr8 (285-318)||(45472140-45472173)
chr8 (242-278)||(17622334-17622370)
[»] chr6 (34 HSPs)
chr6 (55-318)||(29849454-29849717)
chr6 (55-306)||(13762959-13763210)
chr6 (55-320)||(29417854-29418119)
chr6 (55-278)||(5112214-5112436)
chr6 (89-318)||(20412542-20412768)
chr6 (89-321)||(23017885-23018114)
chr6 (75-318)||(24551229-24551470)
chr6 (103-318)||(17757542-17757753)
chr6 (197-318)||(31732519-31732638)
chr6 (197-318)||(27127362-27127481)
chr6 (103-319)||(31736393-31736606)
chr6 (197-318)||(1641968-1642088)
chr6 (241-319)||(35137565-35137643)
chr6 (238-319)||(10989028-10989109)
chr6 (238-319)||(15815909-15815990)
chr6 (238-319)||(21321064-21321145)
chr6 (205-321)||(21681226-21681342)
chr6 (193-252)||(23498812-23498871)
chr6 (238-278)||(4475049-4475089)
chr6 (238-278)||(27222080-27222120)
chr6 (159-230)||(22213142-22213212)
chr6 (238-272)||(1253656-1253690)
chr6 (242-318)||(18857086-18857162)
chr6 (238-278)||(25737390-25737430)
chr6 (238-278)||(34298314-34298354)
chr6 (239-278)||(4644706-4644745)
chr6 (284-318)||(18325705-18325739)
chr6 (206-321)||(18326950-18327065)
chr6 (287-321)||(25607385-25607419)
chr6 (17-46)||(5112293-5112322)
chr6 (17-46)||(29417933-29417962)
chr6 (17-46)||(29849533-29849562)
chr6 (238-270)||(372-404)
chr6 (238-278)||(24644456-24644496)
[»] chr4 (36 HSPs)
chr4 (55-318)||(15988809-15989072)
chr4 (55-321)||(4832542-4832815)
chr4 (55-278)||(33184864-33185086)
chr4 (55-321)||(4829247-4829520)
chr4 (55-290)||(4835837-4836071)
chr4 (74-278)||(14184033-14184236)
chr4 (74-321)||(14187529-14187775)
chr4 (89-318)||(10358168-10358394)
chr4 (74-324)||(15607603-15607850)
chr4 (74-318)||(32467735-32467978)
chr4 (127-318)||(19926-20114)
chr4 (103-318)||(21060846-21061058)
chr4 (197-318)||(14547605-14547724)
chr4 (197-318)||(25089646-25089765)
chr4 (197-322)||(9872113-9872238)
chr4 (191-318)||(51992169-51992295)
chr4 (197-318)||(4859681-4859800)
chr4 (197-318)||(16996521-16996640)
chr4 (206-318)||(14628498-14628610)
chr4 (104-319)||(19733523-19733736)
chr4 (238-278)||(2754472-2754512)
chr4 (238-278)||(18210858-18210898)
chr4 (238-278)||(30145124-30145164)
chr4 (238-278)||(43258993-43259033)
chr4 (103-319)||(16027789-16028003)
chr4 (238-319)||(37017587-37017667)
chr4 (238-278)||(14046742-14046782)
chr4 (238-278)||(24049255-24049295)
chr4 (284-319)||(4890013-4890048)
chr4 (17-46)||(4829326-4829355)
chr4 (17-46)||(4832621-4832650)
chr4 (17-46)||(4835916-4835945)
chr4 (17-46)||(14184148-14184177)
chr4 (17-46)||(14187687-14187716)
chr4 (238-279)||(14971706-14971747)
chr4 (242-278)||(19619078-19619114)
[»] scaffold0577 (3 HSPs)
scaffold0577 (55-318)||(6673-6934)
scaffold0577 (237-321)||(9758-9842)
scaffold0577 (17-46)||(6826-6855)
[»] scaffold0001 (6 HSPs)
scaffold0001 (55-272)||(391088-391305)
scaffold0001 (98-321)||(31048-31265)
scaffold0001 (98-321)||(36355-36572)
scaffold0001 (238-321)||(154368-154451)
scaffold0001 (287-321)||(442910-442944)
scaffold0001 (17-46)||(391197-391226)
[»] chr1 (29 HSPs)
chr1 (101-318)||(21652385-21652602)
chr1 (55-279)||(12359817-12360040)
chr1 (76-318)||(22348686-22348927)
chr1 (98-316)||(24725644-24725857)
chr1 (74-248)||(42696104-42696277)
chr1 (93-324)||(24724344-24724572)
chr1 (103-318)||(19674701-19674917)
chr1 (109-248)||(45753852-45753990)
chr1 (75-319)||(1641623-1641865)
chr1 (197-317)||(38888996-38889115)
chr1 (104-248)||(51475216-51475359)
chr1 (197-318)||(8277942-8278061)
chr1 (197-318)||(48299922-48300041)
chr1 (197-318)||(4597922-4598043)
chr1 (238-278)||(16370189-16370229)
chr1 (238-278)||(21341388-21341428)
chr1 (238-278)||(29533239-29533279)
chr1 (197-320)||(16060238-16060360)
chr1 (264-318)||(42910947-42911000)
chr1 (284-318)||(44890666-44890700)
chr1 (239-316)||(21172410-21172485)
chr1 (238-319)||(32648278-32648359)
chr1 (284-316)||(13301131-13301163)
chr1 (17-47)||(12359896-12359926)
chr1 (284-318)||(17904995-17905029)
chr1 (17-46)||(21652540-21652569)
chr1 (239-320)||(49999323-49999404)
chr1 (206-262)||(12711691-12711747)
chr1 (242-278)||(31611551-31611587)
[»] scaffold0066 (2 HSPs)
scaffold0066 (55-290)||(47219-47453)
scaffold0066 (17-46)||(47345-47374)
[»] scaffold0335 (2 HSPs)
scaffold0335 (101-318)||(8513-8730)
scaffold0335 (17-46)||(8668-8697)
[»] scaffold0117 (3 HSPs)
scaffold0117 (55-278)||(42006-42229)
scaffold0117 (238-278)||(19434-19474)
scaffold0117 (17-46)||(42085-42114)
[»] scaffold0026 (2 HSPs)
scaffold0026 (67-318)||(144869-145118)
scaffold0026 (238-278)||(108854-108894)
[»] scaffold0003 (1 HSPs)
scaffold0003 (74-318)||(94587-94829)
[»] scaffold0083 (1 HSPs)
scaffold0083 (103-321)||(7313-7528)
[»] scaffold0509 (1 HSPs)
scaffold0509 (89-319)||(10544-10770)
[»] scaffold0375 (1 HSPs)
scaffold0375 (89-318)||(10152-10379)
[»] scaffold0051 (1 HSPs)
scaffold0051 (89-299)||(69337-69545)
[»] scaffold0042 (2 HSPs)
scaffold0042 (103-321)||(27593-27809)
scaffold0042 (75-248)||(48247-48420)
[»] scaffold0328 (1 HSPs)
scaffold0328 (75-318)||(17333-17571)
[»] scaffold0075 (2 HSPs)
scaffold0075 (89-318)||(4072-4297)
scaffold0075 (127-318)||(59625-59813)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-318)||(79129-79355)
[»] scaffold0462 (1 HSPs)
scaffold0462 (119-320)||(4969-5167)
[»] scaffold1600 (1 HSPs)
scaffold1600 (98-321)||(1308-1529)
[»] scaffold0220 (1 HSPs)
scaffold0220 (103-321)||(16750-16965)
[»] scaffold0004 (2 HSPs)
scaffold0004 (103-318)||(330296-330509)
scaffold0004 (205-262)||(73813-73870)
[»] scaffold0589 (1 HSPs)
scaffold0589 (74-319)||(2656-2898)
[»] scaffold0671 (1 HSPs)
scaffold0671 (74-321)||(4185-4424)
[»] scaffold0002 (2 HSPs)
scaffold0002 (74-290)||(396838-397052)
scaffold0002 (277-318)||(128294-128335)
[»] scaffold0301 (1 HSPs)
scaffold0301 (197-318)||(9879-9998)
[»] scaffold0059 (1 HSPs)
scaffold0059 (237-318)||(57582-57662)
[»] scaffold1243 (1 HSPs)
scaffold1243 (98-301)||(978-1178)
[»] scaffold0241 (2 HSPs)
scaffold0241 (104-321)||(535-745)
scaffold0241 (238-319)||(18591-18673)
[»] scaffold0010 (1 HSPs)
scaffold0010 (103-289)||(127941-128125)
[»] scaffold0016 (1 HSPs)
scaffold0016 (103-318)||(171304-171517)
[»] scaffold0371 (2 HSPs)
scaffold0371 (197-318)||(12268-12387)
scaffold0371 (284-318)||(13884-13918)
[»] scaffold0195 (2 HSPs)
scaffold0195 (197-318)||(8565-8684)
scaffold0195 (197-318)||(13954-14073)
[»] scaffold0134 (1 HSPs)
scaffold0134 (197-318)||(11245-11364)
[»] scaffold0107 (1 HSPs)
scaffold0107 (197-314)||(35765-35881)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-318)||(141537-141657)
[»] scaffold0321 (2 HSPs)
scaffold0321 (212-318)||(1776-1880)
scaffold0321 (101-213)||(1519-1630)
[»] scaffold0040 (1 HSPs)
scaffold0040 (197-321)||(105200-105323)
[»] scaffold1580 (1 HSPs)
scaffold1580 (239-318)||(191-270)
[»] scaffold0139 (1 HSPs)
scaffold0139 (239-318)||(22359-22438)
[»] scaffold0445 (1 HSPs)
scaffold0445 (93-318)||(3475-3694)
[»] scaffold0005 (1 HSPs)
scaffold0005 (206-318)||(188773-188885)
[»] scaffold1256 (1 HSPs)
scaffold1256 (206-321)||(1221-1336)
[»] scaffold0434 (1 HSPs)
scaffold0434 (264-318)||(8012-8065)
[»] scaffold0039 (1 HSPs)
scaffold0039 (264-318)||(21802-21855)
[»] scaffold1223 (1 HSPs)
scaffold1223 (238-278)||(2175-2215)
[»] scaffold0337 (1 HSPs)
scaffold0337 (238-278)||(11611-11651)
[»] scaffold0080 (1 HSPs)
scaffold0080 (238-278)||(27720-27760)
[»] scaffold0037 (2 HSPs)
scaffold0037 (238-278)||(66180-66220)
scaffold0037 (103-321)||(114154-114366)
[»] scaffold0019 (2 HSPs)
scaffold0019 (238-278)||(138667-138707)
scaffold0019 (238-320)||(24951-25033)
[»] scaffold0529 (2 HSPs)
scaffold0529 (193-319)||(6547-6669)
scaffold0529 (206-321)||(6354-6469)
[»] scaffold0021 (1 HSPs)
scaffold0021 (202-248)||(168528-168574)
[»] scaffold0842 (1 HSPs)
scaffold0842 (241-278)||(4562-4599)
[»] scaffold0599 (1 HSPs)
scaffold0599 (238-278)||(3618-3658)
[»] scaffold0247 (2 HSPs)
scaffold0247 (238-278)||(3578-3618)
scaffold0247 (238-278)||(18849-18889)
[»] scaffold0180 (2 HSPs)
scaffold0180 (242-278)||(821-857)
scaffold0180 (242-278)||(5141-5177)
[»] scaffold0089 (1 HSPs)
scaffold0089 (242-278)||(857-893)
[»] scaffold0064 (1 HSPs)
scaffold0064 (238-278)||(66519-66559)
[»] scaffold0063 (2 HSPs)
scaffold0063 (205-318)||(60842-60955)
scaffold0063 (284-318)||(72410-72444)
[»] scaffold0046 (1 HSPs)
scaffold0046 (238-278)||(14833-14873)
[»] scaffold0012 (1 HSPs)
scaffold0012 (238-278)||(224929-224969)
[»] scaffold0645 (1 HSPs)
scaffold0645 (285-320)||(1421-1456)
[»] scaffold0505 (1 HSPs)
scaffold0505 (193-321)||(2993-3121)
[»] scaffold1849 (1 HSPs)
scaffold1849 (238-320)||(926-1008)
[»] scaffold1212 (1 HSPs)
scaffold1212 (284-318)||(642-676)
[»] scaffold0453 (1 HSPs)
scaffold0453 (276-318)||(6620-6661)
[»] scaffold0230 (2 HSPs)
scaffold0230 (206-321)||(17290-17405)
scaffold0230 (284-318)||(18616-18650)
[»] scaffold0125 (1 HSPs)
scaffold0125 (193-319)||(23832-23961)
[»] scaffold0054 (1 HSPs)
scaffold0054 (284-318)||(67053-67087)
[»] scaffold0032 (1 HSPs)
scaffold0032 (237-319)||(66259-66341)
[»] scaffold0594 (1 HSPs)
scaffold0594 (285-318)||(1939-1972)


Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 52 - 318
Target Start/End: Complemental strand, 26895493 - 26895227
Alignment:
Q  52 atattacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgtttta 151  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26895493 atattacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgtttta 26895394  T
Q  152 ttaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaaca 251  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26895393 ttaagatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagca 26895294  T
Q  252 ttccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  26895293 ttccgtttaaggtgttttactctgatttatgctaaaaaaattcaagttgaaaaaacggggtgttaca 26895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 52 - 318
Target Start/End: Complemental strand, 26900932 - 26900666
Alignment:
Q  52 atattacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgtttta 151  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26900932 atattacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgtttta 26900833  T
Q  152 ttaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaaca 251  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26900832 ttaagatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagca 26900733  T
Q  252 ttccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  26900732 ttccgtttaaggtgttttactctgatttatgctaaaaaaattcaagttgaaaaaacggggtgttaca 26900666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 55 - 319
Target Start/End: Complemental strand, 21244996 - 21244732
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21244996 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacataatgttttatta 21244897  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21244896 agatattttccgatgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattc 21244797  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  21244796 cgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacggggtgttacaa 21244732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 55 - 321
Target Start/End: Complemental strand, 19803282 - 19803015
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  19803282 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaggttgtttaagttgaggccgttgtgccaacatgatgttttatta 19803183  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  19803182 agatattttccgcttcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgttatatttacgttttaaagaagtgtagcattc 19803083  T
Q  255 cgtttaaggtgttttactatgatttatgctaa-aaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19803082 cgtttaaggtgttttactctgatttatgctaaaaaaatttcaagttgggaaaacggggtgttacaatt 19803015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 55 - 290
Target Start/End: Complemental strand, 22702257 - 22702022
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  22702257 ttacgtgatttataatgacttttatgttgaagactgtttagattggatttttattaagttgtttaagttgaagccgtcgtgccaacatgatgttttatta 22702158  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  22702157 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 22702059  T
Q  255 cgtttaaggtgttttactatgatttatg-ctaaaaaa 290  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  22702058 cgtttaaggtgttttactctgatttatgactaaaaaa 22702022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 89 - 321
Target Start/End: Original strand, 24782701 - 24782931
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  24782701 tgtttaaactggactttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 24782799  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||| ||||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| ||||||||   ||||    
T  24782800 tgacatatgatgattgaaataaatattaattttactatattcatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatagcaaaa 24782898  T
Q  289 aatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||| |||||||||||||||||||    
T  24782899 aatttcaagttgggaaaacggggtgttacaatt 24782931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 10898572 - 10898778
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||| ||| ||||| ||| ||||| ||||||| ||||||| ||| | || ||||| ||||||||||||||||| | ||||  |||||||||||    
T  10898572 ttttaataagtcgtttaagttaaggtcgttgcgccaacacgatgtttaatttaaatgttttccgctgcattgagatttaaat-tgatgatatgagatgat 10898670  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||| ||| |||||||||  ||||||||||||||| ||| |  ||| || ||||||||| |||||||||| |||||| |||||||||||    
T  10898671 tgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctattttagttgttttactctgatttatgcaaaaaaaattcaagttgga 10898770  T
Q  303 aaaacggg 310  Q
    ||||||||    
T  10898771 aaaacggg 10898778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 75 - 318
Target Start/End: Complemental strand, 19357350 - 19357111
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || ||||||||||||| | ||||||||| ||||||||||||||||||||  | ||| ||  |||||  | ||||| ||||||||    
T  19357350 tttatgttgaagatttgtctagattggattttaaataagttgtttaagttgaggccgttgtgccattacgatattaaattaa--tgttttccgctgcatt 19357253  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    || |||||| | ||||   ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| || || ||||||     
T  19357252 gatatttaaat-tgatgacatgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttttagttg-tttactc 19357155  T
Q  274 tgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    | |||||||| |||||| |||||||||| ||||||||||||||||    
T  19357154 taatttatgc-aaaaaaattcaagttgggaaaacggggtgttaca 19357111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 110 - 318
Target Start/End: Complemental strand, 5984653 - 5984448
Alignment:
Q  110 aagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaata 209  Q
    |||||||| ||||||||||||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   |||||||||||||||||    
T  5984653 aagttgttaaagttgaggccgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgattgaaata 5984555  T
Q  210 aatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacgg 309  Q
    |||||||| ||| ||||| ||   || |||||||||||| ||| | |||| || || |||||| |||||||||| ||||||||||||||||  |||||||    
T  5984554 aatagtaactttactataattgtattcgaaagaagtgtagcatcctgttttagttg-tttactctgatttatgc-aaaaaatttcaagttgagaaaacgg 5984457  T
Q  310 ggtgttaca 318  Q
    |||||||||    
T  5984456 ggtgttaca 5984448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 104 - 318
Target Start/End: Original strand, 18390017 - 18390229
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| |||||| || |||||||||| |||||||||||| || |||  ||| | || ||||| ||||||||||||||||| | ||||   |||||||||||    
T  18390017 tttaataagttatttaagttgaggctgttgtgccaacacgaagttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgatt 18390115  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc-cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    |||||||||||||||||| |||||||||  | | ||||||||||| ||| |  |||| || || |||||| |||||||||  |||||||||||||||||     
T  18390116 gaaataaatagtaattttactatatttatatattaaagaagtgtagcatcctggttttagttg-tttactctgatttatg-gaaaaaatttcaagttggg 18390213  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||||||||||||    
T  18390214 aaaacggggtgttaca 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 2524520 - 2524640
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||||||||||    
T  2524520 gatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtatcatcctgttt-agttgttttactctgatttatgc-aaaaaatttcaa 2524617  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| ||||| |||||||||||    
T  2524618 gttgggaaaacagggtgttacaa 2524640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 27039742 - 27039900
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||||| |||||| || ||||||||||| ||||||||||| ||||||  ||| || | ||||| ||||||||||||||||||| |||    
T  27039742 tgtttaaactggatttttaataagttatttaagttgaggccattgtgccaacacgatgttgaatttagttgttttccgctgcattgagatttaatt-tga 27039840  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    |   ||  ||||||||||||| ||||||||||||||||||||| | ||  ||||||||||    
T  27039841 tgacatatgatgattgaaatatatagtaattttgctatatttatgattataagaagtgta 27039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 101 - 323
Target Start/End: Complemental strand, 25084677 - 25084458
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||| ||||||||||| || |||||| ||||||||||||||||||||  | | || |  |||| |||||| |||||||||||| ||||   ||  ||||    
T  25084677 attttaattaagttgtttaaattgaggtcgttgtgccaacatgatgttgaacttagttgatttccgctgcaatgagatttaatt-tgatgacatatgatg 25084579  T
Q  201 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttg 300  Q
    ||||||||||||||||||||| | ||||| |  |||||||||||||||  | |||  || || ||||||||| |||||||||| |||||| || || |||    
T  25084578 attgaaataaatagtaattttaccatattcatatttgaaagaagtgtagta-tcctatttagttgttttactctgatttatgcaaaaaaaatt-aaattg 25084481  T
Q  301 gaaaaacggggtgttacaatttg 323  Q
    | |||||||||||||||| ||||    
T  25084480 ggaaaacggggtgttacattttg 25084458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 14692767 - 14692629
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  ||| |  | ||||| |||||||| |||||||| | ||||   |||||||||||    
T  14692767 tttaataagttgtttaagttgaggccgttgtgccaacatgatgttgaatttaattgttttccgctgcattaagatttaagt-tgatgacatgagatgatt 14692669  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaagaa 243  Q
    |||||||||||||| ||| ||||||| |  ||||||||||    
T  14692668 gaaataaatagtaactttactatattcatatttgaaagaa 14692629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 193 - 318
Target Start/End: Complemental strand, 22670984 - 22670861
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatt 292  Q
    ||||||| ||||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| || ||||||||| ||||||||||  ||||| |    
T  22670984 atgagattattgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttttagttgttttactctgatttatgc--aaaaaat 22670887  T
Q  293 tcaagttggaaaaacggggtgttaca 318  Q
    |||| |||| |||| |||||||||||    
T  22670886 tcaaattgggaaaatggggtgttaca 22670861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 17305609 - 17305490
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| ||||| |||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||| ||| ||||||||||||    
T  17305609 gatgattgagataattagtacttttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttttgc-aaaaaatttcaa 17305512  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||||    
T  17305511 gttggaaaaacggggtgttaca 17305490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 23759734 - 23759617
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| || ||| || ||||||||| | |||||||| ||||||||||||    
T  23759734 gatgattgacataattagtaattttactatattcagatttgaaagaagtgtagcat-cctttttagttgttttactctaatttatgc-aaaaaatttcaa 23759637  T
Q  297 gttggaaaaacggggtgtta 316  Q
    ||||| ||||||||||||||    
T  23759636 gttgggaaaacggggtgtta 23759617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 24514368 - 24514248
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||||  ||||    
T  24514368 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaatcaa 24514271  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| |||||||||||||||||    
T  24514270 gttgggaaaacggggtgttacaa 24514248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 36838306 - 36838186
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  36838306 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 36838209  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| ||||| |||||||||||    
T  36838208 gttgggaaaacagggtgttacaa 36838186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 28654482 - 28654601
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  28654482 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 28654579  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||| |||||||||||    
T  28654580 gttgggaaaatggggtgttaca 28654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 5033225 - 5033384
Alignment:
Q  160 ttttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgttt 259  Q
    ||||| ||||||||||||||||||| ||||   ||  ||| |||||||||||||||||||||  |||||| |  ||||||||||||||| ||| | ||||    
T  5033225 ttttccgctgcattgagatttaatt-tgatgacatatgataattgaaataaatagtaattttattatattcatatttgaaagaagtgtagcatcctgttt 5033323  T
Q  260 aaggtgttttactatgatttatgc--taaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
     || ||||||||  ||||||||||   ||||||  ||||||||| |||||||||||||||||    
T  5033324 -agttgttttaccctgatttatgcaacaaaaaaaatcaagttgggaaaacggggtgttacaa 5033384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 19665301 - 19665383
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||||||||||||||||||||||    
T  19665301 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttggaaaaacggggtgttacaat 19665383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 119 - 318
Target Start/End: Complemental strand, 25044526 - 25044328
Alignment:
Q  119 aagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaat 218  Q
    ||||||||||| ||||||||||| ||||||  | | || | ||||| | |||| | |||||||||| ||||   ||  ||||||||| |||| |||||||    
T  25044526 aagttgaggccattgtgccaacacgatgttgaacttagttgttttccgttgcaataagatttaatt-tgatgacatatgatgattgagataattagtaat 25044428  T
Q  219 tttgctatatttacgt--ttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgtta 316  Q
    ||| |||||||||  |  ||  |||| ||||| ||| | ||||| | ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  25044427 tttactatatttatataattataagatgtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaagttgggaaaacggggtgtta 25044330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 19664342 - 19664425
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||||    
T  19664342 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaatt 19664425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 22253517 - 22253630
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| || | |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||| | |||||| |||||    
T  22253517 gatgattgagattattagtaattttactatattcaaatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatac-aaaaaaattcaa 22253614  T
Q  297 gttggaaaaacggggt 312  Q
    ||||| ||||||||||    
T  22253615 gttgggaaaacggggt 22253630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 27058486 - 27058539
Alignment:
Q  264 tgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  27058486 tgttttactctgatttatgc-aaaaaatttaaagttggaaaaacggggtgttaca 27058539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 12629640 - 12629693
Alignment:
Q  237 gaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| | ||||||    
T  12629640 gaaagaagtgtagcattccgtttaaggtgttttactctgatttatacaaaaaaa 12629693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 6262921 - 6262961
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  6262921 aaagaagtgtaacattccgtttaaggtgttttactctgatt 6262961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18872910 - 18872950
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  18872910 aaagaagtgtaacattccgtttaaggtgttttactctgatt 18872950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 21078113 - 21078153
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  21078113 aaagaagtgtaacattccgtttaaggtgttttactctgatt 21078153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 44070857 - 44070823
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  44070857 taaaaaatttcaagttggaaaaacggggtgttaca 44070823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 9240013 - 9239973
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  9240013 aaagaagtgtaacattccgttgaaggtgttttactctgatt 9239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 18391815 - 18391949
Alignment:
Q  93 tagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatatt 192  Q
    ||||||||||||| || |||||||| | ||||||||||||||||||  | ||||||| ||||  || ||||| | |||| |||||||||| | ||||       
T  18391815 tagattggattttaat-aagttgtttatgttgaggccgttgtgccattacgatgtttaatta--atgttttccgatgcaatgagatttaaat-tgatgac 18391910  T
Q  193 atgagatgattgaaataaatagtaattttgctatattta 231  Q
    |||||||| ||  |||||||||||||||| || ||||||    
T  18391911 atgagatgttttgaataaatagtaattttactctattta 18391949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 13102536 - 13102570
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||| ||||||||||||||||||||||||||||    
T  13102536 aaagaaatgtaacattccgtttaaggtgttttact 13102570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 22258266 - 22258232
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  22258266 taaaaaatttcaagttgggaaaacggggtgttaca 22258232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 24740478 - 24740512
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  24740478 taaaaaatttcaagttgggaaaacggggtgttaca 24740512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 19803203 - 19803174
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  19803203 tgccaacatgatgttttattaagatatttt 19803174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 22702178 - 22702149
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  22702178 tgccaacatgatgttttattaagatatttt 22702149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 24783125 - 24783158
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||| ||||||||||||||||    
T  24783125 aaaaaatttcaagttgggaaaacggggtgttaca 24783158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 26895411 - 26895382
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  26895411 tgccaacatgatgttttattaagatatttt 26895382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 26900850 - 26900821
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  26900850 tgccaacatgatgttttattaagatatttt 26900821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 55 - 321
Target Start/End: Original strand, 14189998 - 14190264
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  14189998 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtggcaacatgatgttctatta 14190097  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    ||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14190098 agatattttcctctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacttttgaaagaagtgtaacattc 14190197  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14190198 cgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacggggtgttacaatt 14190264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 55 - 318
Target Start/End: Complemental strand, 13254547 - 13254286
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  13254547 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 13254448  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  13254447 agatattttccgctgcattgagatttaattttaatattatgaaatgattgaaat-aatagtaattttgctatatttacgtttg-aagaagtgtagcattc 13254350  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  13254349 cgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacggggtgttaca 13254286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 55 - 321
Target Start/End: Complemental strand, 15212720 - 15212455
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  15212720 ttacgtgatt-attatgactcttatgttgaagactgtttagactggatttttattaagtagtttaagttgaggccgttctgccaacatgatgttttatta 15212622  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  15212621 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgttatatttacgtttgaaagaagtgtagcattc 15212522  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  15212521 cgtttaaggtgttttactctgatttatgctaaaaaatttcaagttaggaaaacggggtgttacaatt 15212455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 55 - 319
Target Start/End: Complemental strand, 48742483 - 48742219
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| |||||||||||||||||| |||| | || ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  48742483 ttacgtgatttattatgacttttatgttgaagactatttatactgaatttttactaatttgtttaagttgaggccgttgtgccaacatgatgttttatta 48742384  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  48742383 agatattttccgctgcattgagatttaattttaatattatgaaatgattaaaataaatagtaattttgctatatttacgtttgaaagaagtgtagtattc 48742284  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  48742283 cgtttaaggtgttttactctgatttatgctaaaaaaattcaagttgggaaaacggggtgttacaa 48742219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 80 - 318
Target Start/End: Original strand, 14192781 - 14193019
Alignment:
Q  80 gttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatt 179  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||    
T  14192781 gttgaagactgtttagactggatttttatgaagttgtttaagttgaggccgttgtgccaacatgatgttctattaagatatttttcgctacattgagatt 14192880  T
Q  180 taattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt 279  Q
     |||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14192881 gaattttgatattatgaaatgattgaaattaatagtaattttgctatatttacatttgaaagaagtgtaacattccgtttaaggtgttttactctgattt 14192980  T
Q  280 atgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  14192981 atgctaaaaattttcaagttgggaaaacggggtgttaca 14193019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 100 - 318
Target Start/End: Complemental strand, 12370566 - 12370351
Alignment:
Q  100 gatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagat 199  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | |||||  ||||| |||||| ||||| ||||   ||  |||    
T  12370566 gattttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccactgcaatgagatataatt-tgatgacatatgat 12370468  T
Q  200 gattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagtt 299  Q
    |||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || |||||||||||||||||||| |||||||||||||||    
T  12370467 gattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactatgatttatgc-aaaaaatttcaagtt 12370370  T
Q  300 ggaaaaacggggtgttaca 318  Q
    || ||||||||||||||||    
T  12370369 gggaaaacggggtgttaca 12370351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 74 - 319
Target Start/End: Complemental strand, 32997180 - 32996938
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| || |||||||| ||||||||||||||||||||||| || |||  ||| | || |||||||||||||    
T  32997180 ttttatgttgaagatttgtttaaactggattttaat-aagttgtttaagttgaggccgttgtgccaacacgacgttgaatttaaatgttttctgctgcat 32997082  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||| | ||||   ||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||  ||| | |||| || || ||||||    
T  32997081 tgagatttaaat-tgatgacatgagatgattgaaataaatagtaactttactatatttatatttgaaagaagtgtggcatcctgttttagttg-tttact 32996984  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
     ||||||||| |||||||||||||||| | |||||||||||||||||    
T  32996983 ctgatttatg-taaaaaatttcaagttaggaaaacggggtgttacaa 32996938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 15121049 - 15121275
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| |||||||||| |||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  15121049 tgtttaaactggattttaattaagttgtttaagttgaggctgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 15121147  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||| | ||| | |||| || ||||||||| |||||| ||| ||||    
T  15121148 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttgtgc-aaaa 15121245  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||||||||||||    
T  15121246 aatttcaagttggaaaaacggggtgttaca 15121275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 89 - 320
Target Start/End: Complemental strand, 44373222 - 44372994
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||| ||||| |||||||| |||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  44373222 tgtttaaactggattttaattaaattgtttaagttgagaccgttgtgccaacatgatgttaaacttagttgttttccgctgcaatgagatttaatt-tga 44373124  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || ||||||||| |||||||||| ||||    
T  44373123 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaa 44373026  T
Q  289 aatttcaagttggaaaaacggggtgttacaat 320  Q
    || ||||||||| |||||||||||||||||||    
T  44373025 aaattcaagttgaaaaaacggggtgttacaat 44372994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 89 - 320
Target Start/End: Complemental strand, 44382078 - 44381850
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||| ||||| |||||||| |||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  44382078 tgtttaaactggattttaattaaattgtttaagttgagaccgttgtgccaacatgatgttaaacttagttgttttccgctgcaatgagatttaatt-tga 44381980  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || ||||||||| |||||||||| ||||    
T  44381979 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaa 44381882  T
Q  289 aatttcaagttggaaaaacggggtgttacaat 320  Q
    || ||||||||| |||||||||||||||||||    
T  44381881 aaattcaagttgaaaaaacggggtgttacaat 44381850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 13151369 - 13151595
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  13151369 tgtttaaactggattttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 13151467  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| || |||| ||| | |||| || ||||||||| |||||||||| ||||    
T  13151468 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaaaaaatgtagcatcctgttt-agttgttttactctgatttatgc-aaaa 13151565  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    ||||| ||||||| ||||||||||||||||    
T  13151566 aattttaagttgggaaaacggggtgttaca 13151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 101 - 320
Target Start/End: Original strand, 36706420 - 36706636
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||||| |||| |||| ||||||||||||||||||||||| ||||||  | | || | ||||| |||||| ||||| |||||| ||||   ||  ||||    
T  36706420 atttttaataagctgtttaagttgaggccgttgtgccaacacgatgttgaacttagttgttttccgctgcaatgagacttaatt-tgatgacatatgatg 36706518  T
Q  201 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttg 300  Q
    ||||||||||||||||||||||||||||||| | ||  |||||||||| ||| | ||||||  ||||||||| |||||||||| |||||| |||||||||    
T  36706519 attgaaataaatagtaattttgctatatttatgattataagaagtgtagcatcctgtttaa-ttgttttactctgatttatgc-aaaaaaattcaagttg 36706616  T
Q  301 gaaaaacggggtgttacaat 320  Q
    | |||||| |||||||||||    
T  36706617 ggaaaacgaggtgttacaat 36706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 17131264 - 17131476
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| | |||||||||||| |||||||| ||||||  ||| | || ||||| |||||| |||||||||||| |||||  ||||||||||    
T  17131264 ttttaataagttgtt-aggttgaggccgttatgccaacacgatgttgaatttaaatgttttccgctgcaatgagatttaatt-tgataacatgagatgat 17131361  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaatttcaagttgg 301  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||||  ||  |||||| ||| ||||||| |||||||||||||||||    
T  17131362 tgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttta--gttgtttactctgattttatgc-aaaaaatttcaagttgg 17131458  T
Q  302 aaaaacggggtgttacaa 319  Q
     ||||||  |||||||||    
T  17131459 gaaaacgttgtgttacaa 17131476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 89 - 319
Target Start/End: Original strand, 32435258 - 32435485
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| |||||||||||||||||||||||| |||||  | | || | ||||||||  || |||||||||||| |||    
T  32435258 tgtttaaactggattttaattaagttgtttaagttgaggccgttgtgccaacataatgttgaacttagttgttttctgcaacaatgagatttaatt-tga 32435356  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  |||||||||||| || ||| | |||| || ||||||||| |||||||||| ||||    
T  32435357 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtatagcatcctgttt-agttgttttactctgatttatgc-aaaa 32435454  T
Q  289 aatttcaagttggaaaaacggggtgttacaa 319  Q
    |  |||||||||| ||||| |||||||||||    
T  32435455 agattcaagttgggaaaacagggtgttacaa 32435485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 101 - 318
Target Start/End: Original strand, 36687009 - 36687227
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | ||||| |||||| | |||||||||| ||||   ||  ||||    
T  36687009 attttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatcagatttaatt-tgatgacatatgatg 36687107  T
Q  201 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatg---ctaaaaaatttcaag 297  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||   | ||||||  |||||    
T  36687108 attgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgcaacaaaaaaaaatcaag 36687206  T
Q  298 ttggaaaaacggggtgttaca 318  Q
    |||| ||||||||||||||||    
T  36687207 ttgggaaaacggggtgttaca 36687227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 75 - 314
Target Start/End: Original strand, 10660750 - 10660976
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | ||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||| || ||| | || ||||| ||||||||    
T  10660750 tttatgttgaagatttgtttagactggattttaat-aagttgtttaagttgaggccgttgtgccaacacgatg-ttgatttaaatgttttccgctgcatt 10660847  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    ||||||||| | ||||   |||||||||||||||||||||| || ||| |||||||||          ||||||| ||| | |||| || |||||||||     
T  10660848 gagatttaaat-tgatgacatgagatgattgaaataaatagcaactttactatattta----------aagtgtagcatcctgttttagttgttttactt 10660936  T
Q  274 tgatttatgctaaaaaatttcaagttggaaaaacggggtgt 314  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  10660937 tgatttatgc-aaaaaatttcaagttgggaaaacggggtgt 10660976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 89 - 319
Target Start/End: Original strand, 13700454 - 13700681
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||| ||| | ||||||||| ||||||||||||| ||||||  ||| | || ||||||| ||||||||||||||| | |||    
T  13700454 tgtttaaactggattttaattaaattgattaagttgaggtcgttgtgccaacaggatgttgaatttaaatgttttctgttgcattgagatttaaat-tga 13700552  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   || ||||||||| |||||||| ||| |||  ||||||||  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| || |    
T  13700553 tgacataagatgattg-aataaataataactttattatatttatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgcaaaga 13700650  T
Q  289 aatttcaagttggaaaaacggggtgttacaa 319  Q
    | ||||||||||  ||||||| |||||||||    
T  13700651 attttcaagttgagaaaacggagtgttacaa 13700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 89 - 282
Target Start/End: Complemental strand, 11065706 - 11065515
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||| ||||| ||||||||||||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  11065706 tgtttaaactggattttaattaacttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 11065608  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatg 282  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| || |||| ||| | |||| || ||||||||| |||||||||    
T  11065607 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaacaactgtagcatcctgttt-agttgttttactctgatttatg 11065515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 319
Target Start/End: Complemental strand, 4070264 - 4070051
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| |||||||| |||||||||||  | ||||||| ||| | || ||||| |||||| ||  |||||| | ||||   ||||||||||    
T  4070264 ttttaataagttgtttaagttgagaccgttgtgccattacgatgtttaattta-atgttttccgctgcaatggaatttaaat-tgatgacatgagatgat 4070167  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||| |||||| |||| || || |||||| |||||| |   |||| |||| |||||||     
T  4070166 tgaaataaatagtaattttactatatttatatttgaaagtagtgtgacattctgttttagttg-tttactctgattttttgcaaaatattttaagttggg 4070068  T
Q  303 aaaacggggtgttacaa 319  Q
    ||||| |||||||||||    
T  4070067 aaaacagggtgttacaa 4070051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 104 - 321
Target Start/End: Original strand, 14220761 - 14220971
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| |||||| || |||||||||| |||||||||  | ||| ||  |||||  | ||||| ||||||||||||||||| | ||||   ||||| |||||    
T  14220761 tttaataagttatttaagttgaggcagttgtgccattacgatattaaattaa--tgttttccgctgcattgagatttaaat-tgatgacatgagttgatt 14220857  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaa 303  Q
    ||| |||||||||| ||| |||||||||  ||||||||||||||||||||| |||||  ||  |||||| |||| ||||| ||||||||||||||||| |    
T  14220858 gaa-taaatagtaactttactatatttatatttgaaagaagtgtaacattctgttta--gtcgtttactctgatatatgc-aaaaaatttcaagttggga 14220953  T
Q  304 aaacggggtgttacaatt 321  Q
    ||| || |||||| ||||    
T  14220954 aaatggagtgttataatt 14220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 14553055 - 14552930
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatt 292  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||| | ||| | |||| || || |||||| | ||||| || ||||||||    
T  14553055 atgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgcagcatcctgttttagttg-tttactctcatttacgc-aaaaaatt 14552958  T
Q  293 tcaagttggaaaaacggggtgttacaat 320  Q
    ||||||||| ||||  ||||||||||||    
T  14552957 tcaagttgggaaaatagggtgttacaat 14552930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 15719059 - 15718939
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  15719059 gatgattgagataattagtaattttactatattcagatttgaaagaaatgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 15718962  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| ||||| |||||||||||    
T  15718961 gttgggaaaaccgggtgttacaa 15718939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 37786033 - 37786201
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | |||||||||||||||  | |||||| || ||||||||||||||||||||  | ||| ||  |||||  | ||||| |||| |||    
T  37786033 tttatgttgaagatttgtttagattggattt--aataagttatttaagttgaggccgttgtgccattacgatattaaattaa--tgttttccgctgtatt 37786128  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgt 247  Q
    ||||||||| | ||||   ||||||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||    
T  37786129 gagatttaaat-tgatgacatgagatgactgaaataaatagtaaatttactatatttatattttaaagaagtgt 37786201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 11092386 - 11092304
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||| ||||| ||||||||||||||||| |||||| |   | ||| ||||||||||| |||||||||||||||||||    
T  11092386 aagaagtgtagcattctgtttaaggtgttttactttgatttttatgagaaattttcaagttgggaaaacggggtgttacaatt 11092304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 19280921 - 19280801
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| || | |||||||||| ||||||| |  ||||||||||||||||||| | |||| || ||||||||| ||||||||     ||| ||||||    
T  19280921 gatgattgagatgattagtaattttactatattcagatttgaaagaagtgtaacatcctgttt-agttgttttactctgatttatatgtgaaattttcaa 19280823  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||||||||| ||||||||||    
T  19280822 gttggaaaaacagggtgttaca 19280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 30822892 - 30822974
Alignment:
Q  237 gaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagtt-ggaaaaacggggtgttaca 318  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |   | ||| ||||||||| |||||||||||| ||||||    
T  30822892 gaaagaagtgtagcattccgtttaaggtgttttactttgatttttatgagaaattttcaagttgggaaaaacggggggttaca 30822974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 145827 - 145787
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  145827 aaagaagtgtaacattccgtttaaggtgttttactctgatt 145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 11084631 - 11084555
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||| ||||||||||||||||||||||| |||||| |   | ||| ||||||||||| ||||||| ||||||||    
T  11084631 aagtgtagcattccgtttaaggtgttttactctgatttttatgagaaactttcaagttgggaaaacggtgtgttaca 11084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 16004292 - 16004252
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  16004292 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16004252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 16110675 - 16110715
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  16110675 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16110715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 34956344 - 34956304
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  34956344 aaagaagtgtaacattccgtttaaggtgttttactctgatt 34956304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 15578586 - 15578620
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  15578586 taaaaaatttcaagttggaaaaacggggtgttaca 15578620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 20584425 - 20584333
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    ||||||||| |||| |||||||||| ||||| | |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||||    
T  20584425 gatgattgagataattagtaattttactatactcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgcaaaaaaa 20584333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 834744 - 834784
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  834744 aaagaagtgtaacattccatttaaggtgttttactctgatt 834784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 854785 - 854825
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  854785 aaagaagtgtaacattccatttaaggtgttttactctgatt 854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 1199924 - 1199964
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  1199924 aaagaagtgtaacattccatttaaggtgttttactctgatt 1199964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 1212789 - 1212829
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  1212789 aaagaagtgtaacattccatttaaggtgttttactctgatt 1212829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11659602 - 11659562
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  11659602 aaagaggtgtaacattccgtttaaggtgttttactctgatt 11659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 14420015 - 14419983
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgtttta 270  Q
    |||||||||||||||||||||||||||||||||    
T  14420015 aaagaagtgtaacattccgtttaaggtgtttta 14419983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 16252441 - 16252477
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16252441 aagtgtaacattccgtttaaggtgttttactctgatt 16252477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 29003119 - 29003043
Alignment:
Q  243 agtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  29003119 agtgtaacattccgtttaaggtgttttactttgattaatttatgaaatttttatgttgggaaaacggggtgttacaa 29003043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 4692544 - 4692578
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  4692544 taaaaaatttcaagttgggaaaacggggtgttaca 4692578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 13254468 - 13254439
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  13254468 tgccaacatgatgttttattaagatatttt 13254439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 13890887 - 13890807
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaat-ttcaagttggaaaaacggggtgttaca 318  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||  ||  |||| || | ||||||||||||||||||||||    
T  13890887 aaagaaatgtaacattccgtttaaggttttttactttgattaat-ttatgaaatctttatgttggaaaaacggggtgttaca 13890807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 15212642 - 15212613
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  15212642 tgccaacatgatgttttattaagatatttt 15212613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 15623528 - 15623483
Alignment:
Q  93 tagattggatttttattaagttgttgaagttgaggccgttgtgcca 138  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||||||    
T  15623528 tagattggaattttaataagttgtttatgttgaggccgttgtgcca 15623483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 43746704 - 43746667
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  43746704 taaaaaatttcaagttgggaaaacagggtgttacaatt 43746667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 48742404 - 48742375
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  48742404 tgccaacatgatgttttattaagatatttt 48742375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 54 - 321
Target Start/End: Complemental strand, 6555422 - 6555155
Alignment:
Q  54 attacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatt 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  6555422 attacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgtttcatt 6555323  T
Q  154 aagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||    
T  6555322 aagatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtagtttttctatatttacgtttgaaagaagtatagcatt 6555223  T
Q  254 ccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  6555222 ccgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacggggtgttacaatt 6555155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 54 - 318
Target Start/End: Complemental strand, 6554821 - 6554557
Alignment:
Q  54 attacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatt 153  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||    
T  6554821 attacgtgatttattatgacttttatgtcgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgcaaacatgatgtttcatt 6554722  T
Q  154 aagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||    
T  6554721 aagatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaatttttctatatttacgtttgaaagaagtatagcatt 6554622  T
Q  254 ccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6554621 ccgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacggggtgttaca 6554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 321
Target Start/End: Complemental strand, 22469060 - 22468797
Alignment:
Q  59 gtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagat 158  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  22469060 gtgattcattatgacttttatgttgaagactgtttagactggatctttattaagttgtttaagttgaggccgttgtgccaacatgatgttttgttgagat 22468961  T
Q  159 attttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtt 258  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22468960 attttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttatgtttgaaagaagtgtaacattccgtt 22468861  T
Q  259 taaggtgttttactatgatttatgctaa-aaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  22468860 taagatgttttactctgatttatgctaaaaaaaattcaagttggaaaaacggggtgttacaatt 22468797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 55 - 320
Target Start/End: Original strand, 22359001 - 22359258
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  22359001 ttacgtgatttattatgacttttatgttgaagactatttagactggatttttattaagt---------tgaggccgttgtgccaacatgatgttttatta 22359091  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  22359092 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgttcgaaagaagtgtagcattc 22359191  T
Q  255 cgtttaaggtgttttactatgatttatgct-aaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  22359192 cgtttaaggtgttttactctgatttatgctaaaaaaaattcaagttgggaaaacggggtgttacaat 22359258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 55 - 290
Target Start/End: Complemental strand, 23537578 - 23537344
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  23537578 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttatttaagttgaggccgtcgtgccaacatgatgttttatta 23537479  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  23537478 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 23537380  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||||||||| |||||||||||||||||    
T  23537379 cgtttaaggtgttttactctgatttatgctaaaaaa 23537344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 85 - 290
Target Start/End: Complemental strand, 10815715 - 10815511
Alignment:
Q  85 agactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaatt 184  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10815715 agactgtttagactggatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttattaagatattttccgctgcattgagatttaatt 10815616  T
Q  185 ctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgct 284  Q
     ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  10815615 ttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgct 10815517  T
Q  285 aaaaaa 290  Q
    | ||||    
T  10815516 ataaaa 10815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 100 - 321
Target Start/End: Complemental strand, 23540683 - 23540455
Alignment:
Q  100 gatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagat 199  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||    
T  23540683 gatttttattaagttatttaagttgaggccgtcgtgccaacatgatgttttattaagatattttccgctgcattgagatttaattttgatattatgaaat 23540584  T
Q  200 gattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaa--------aaaat 291  Q
    ||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||        ||||     
T  23540583 gattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtaacattccgtttaaggtgttttactctgatttatgctaaaaaaaaataaaaa 23540485  T
Q  292 ttcaagttggaaaaacggggtgttacaatt 321  Q
     |||||||||||||||||||||||||||||    
T  23540484 atcaagttggaaaaacggggtgttacaatt 23540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 89 - 318
Target Start/End: Complemental strand, 26760701 - 26760475
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | |||||||||||| |||||||||||| |||    
T  26760701 tgtttaaactggattttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttctgctgcaatgagatttaatt-tga 26760603  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||| ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||||| |||| || ||||||||| |||||||| | ||||    
T  26760602 tgacatgtgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcattctgttt-agttgttttactctgatttatac-aaaa 26760505  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    || |||||||||| ||||||||||||||||    
T  26760504 aaattcaagttgggaaaacggggtgttaca 26760475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 103 - 316
Target Start/End: Original strand, 25251415 - 25251627
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| || |||||| ||||||||||| ||||||||||| ||||||  ||| | || |||| |||||||||||||||||| | ||||   ||||||||||    
T  25251415 ttttaatatgttgtttaagttgaggccattgtgccaacacgatgttgaatttaaatgttttttgctgcattgagatttaaat-tgatgacatgagatgat 25251513  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaa-atttcaagttgg 301  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||| ||| | |||| || || |||||| |||||||||| ||||| ||||||||||||    
T  25251514 tgaaataaatagtaattttactatgtttatatttgaaagaagtgtagcatccggttttagttg-tttactctgatttatgcaaaaaatatttcaagttgg 25251612  T
Q  302 aaaaacggggtgtta 316  Q
     ||||||||||||||    
T  25251613 gaaaacggggtgtta 25251627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 103 - 316
Target Start/End: Original strand, 25315200 - 25315412
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| || |||||| ||||||||||| ||||||||||| ||||||  ||| | || |||| |||||||||||||||||| | ||||   ||||||||||    
T  25315200 ttttaatatgttgtttaagttgaggccattgtgccaacacgatgttgaatttaaatgttttttgctgcattgagatttaaat-tgatgacatgagatgat 25315298  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaa-atttcaagttgg 301  Q
    ||||||||||||||||||| |||| ||||  ||||||||||||||| ||| | |||| || || |||||| |||||||||| ||||| ||||||||||||    
T  25315299 tgaaataaatagtaattttactatgtttatatttgaaagaagtgtagcatccggttttagttg-tttactctgatttatgcaaaaaatatttcaagttgg 25315397  T
Q  302 aaaaacggggtgtta 316  Q
     ||||||||||||||    
T  25315398 gaaaacggggtgtta 25315412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 75 - 318
Target Start/End: Complemental strand, 16226366 - 16226125
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| | ||||||||| ||||||||||||||||||||||| || |||  ||| | || ||||| ||||||||    
T  16226366 tttatgttgaagatttgtctagactggattttaaataagttgtttaagttgaggccgttgtgccaacacgaagttgaatttaaatgttttccgctgcatt 16226267  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
     |||||||| | ||||   |||| |||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||| | |||||  ||  ||||||     
T  16226266 aagatttaaat-tgatgacatgatatgattgaaataaatagtaattttactatatttatatttaaaagaagtgtagcatcctgttta--gttgtttactc 16226170  T
Q  274 tga-tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||| ||||||| ||||| ||||||||||| ||||||||||||||||    
T  16226169 tgattttatgc-aaaaattttcaagttgggaaaacggggtgttaca 16226125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 98 - 319
Target Start/End: Complemental strand, 10952528 - 10952308
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatatttt-ctgctgcattgagatttaattctgatattatga 196  Q
    |||||||||| |||||| || ||||||||||||||||||||||| ||||||  | | || | |||| | ||| || |||||||||||| ||||   ||      
T  10952528 tggatttttaataagttatt-aagttgaggccgttgtgccaacacgatgttgaacttagttgtttttccgctccaatgagatttaatt-tgatgacatat 10952431  T
Q  197 gatgattgaaataaatagtaattttgctatatttacg-tttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttca 295  Q
    ||||||||||||| |||| |||||||||||||||| | ||||||||||||||| ||| |  |||| | ||||||||| |||||||||  || || |||||    
T  10952430 gatgattgaaatatatagcaattttgctatatttatgatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgtaaagaattttca 10952332  T
Q  296 agttggaaaaacggggtgttacaa 319  Q
    |||||| |||||||||| ||||||    
T  10952331 agttgggaaaacggggtcttacaa 10952308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 89 - 318
Target Start/End: Complemental strand, 20564773 - 20564550
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||||| ||||||||   |||||| || || |||||||||||||||||  ||||| ||  |||||  | ||||| |||||||||| |||||| | ||     
T  20564773 tgtttagactggatttta--taagttatttaacttgaggccgttgtgccattatgatattaaattaa--tgttttccgctgcattgatatttaaat-tgt 20564679  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaa 287  Q
    |   ||||||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||| ||| | |||| || ||||||||| ||| ||||||| |||    
T  20564678 tgacatgagatgactgaaataaatagtaactttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactctgattttatgc-aaa 20564581  T
Q  288 aaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||| ||||||||||||||||    
T  20564580 aaatttcaacttgggaaaacggggtgttaca 20564550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 11898909 - 11899031
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| |||| || |  ||||||||||||||| |||    |||| | ||||||||| |||||||||| |||||||| |||    
T  11898909 gatgattgagataattagtaattttactatcttcagatttgaaagaagtgtagcatcatattta-gttgttttactctgatttatgcaaaaaaatt-caa 11899006  T
Q  297 gttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||||||||||    
T  11899007 gttggaaaaacggggtgttacaatt 11899031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 20470647 - 20470857
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| |||||| || | |||||||| |||||||||   |||||||| |||||  | ||||| |||||| |||||||||| | ||||   |||||||| |    
T  20470647 ttttaataagttatttatgttgaggcagttgtgccattgtgatgtttaattaa--tgttttccgctgcaatgagatttaaat-tgatgacatgagatgtt 20470743  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt-atgctaaaaaatttcaagttgg 301  Q
    |||||||||  |||||||| || |||||| |||| |||| ||||| |||| | |||| || ||||| ||| |||||| |||| ||||||||||||||||     
T  20470744 tgaaataaa--gtaattttactctatttatgttttaaagtagtgtgacatcctgttttagttgttt-actctgattttatgc-aaaaaatttcaagttga 20470839  T
Q  302 aaaaacggggtgttacaa 319  Q
     |||||||||||||||||    
T  20470840 gaaaacggggtgttacaa 20470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 26748386 - 26748273
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| || || ||| |||||  |||| ||||||||||||||||||     
T  26748386 aaataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggg 26748289  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||||||||||||    
T  26748288 aaaacggggtgttaca 26748273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 22338306 - 22338223
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||||    
T  22338306 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaatt 22338223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 26833408 - 26833326
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||  ||||||||||||||||||||||| |||||| |   | ||| ||||||||||| |||||| ||||||||||||    
T  26833408 aagaagtgtcgcattccgtttaaggtgttttactctgatttttatgagaaattttcaagttggcaaaacgaggtgttacaatt 26833326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 37806218 - 37806299
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  37806218 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaa 37806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22748549 - 22748509
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  22748549 aaagaagtgtaacattccgtttaaggtgttttactctgatt 22748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 23114188 - 23114228
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  23114188 aaagaagtgtaacattccgtttaaggtgttttactctgatt 23114228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 28372866 - 28372906
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  28372866 aaagaagtgtaacattccgtttaaggtgttttactctgatt 28372906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22334776 - 22334736
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  22334776 aaagaagtgtaacattccgtttaaggggttttactctgatt 22334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 36448199 - 36448159
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  36448199 aaagaagtgtaatattccgtttaaggtgttttactctgatt 36448159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 26645801 - 26645767
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  26645801 taaaaaatttcaagttgggaaaacggggtgttaca 26645767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 10815666 - 10815637
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  10815666 tgccaacatgatgttttattaagatatttt 10815637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 22359071 - 22359100
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  22359071 tgccaacatgatgttttattaagatatttt 22359100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 23537499 - 23537470
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  23537499 tgccaacatgatgttttattaagatatttt 23537470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 23540649 - 23540620
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  23540649 tgccaacatgatgttttattaagatatttt 23540620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 29913650 - 29913617
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||||||| ||||||||    
T  29913650 aaaaaatttcaagttggaaaaacggagtgttaca 29913617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 21619750 - 21619786
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  21619750 aaaaaatttcaagttgggaaaatggggtgttacaatt 21619786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 215; Significance: 1e-117; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 55 - 321
Target Start/End: Original strand, 13027399 - 13027665
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  13027399 ttacgtgatttattatgactcttatgttgaagactgtttagactgaatttttattaagttgtttaagttgaggccgttgtgccaacataatgttttatta 13027498  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13027499 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattc 13027598  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  13027599 cgtttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaatggggtgttacaatt 13027665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 55 - 290
Target Start/End: Original strand, 1990265 - 1990500
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  1990265 ttacgtgatttattatgacttttatattgaagactgtttagactggatttttattaagttgtttaagttgaggccgtagtgccaacatgatgttttatta 1990364  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1990365 agatattttccgctgcattgagatttaattttgatattatgaaatgcttgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattc 1990464  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||||||||| |||||||||||||||||    
T  1990465 cgtttaaggtgttttactctgatttatgctaaaaaa 1990500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 55 - 290
Target Start/End: Original strand, 34853588 - 34853822
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    ||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  34853588 ttacgtgatttatcatgacttttatgttgaagactgtttagactgaatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 34853687  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| |||| |||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||    
T  34853688 agatattttccgctgcattgagatttaattttgatgttatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtaacattc 34853786  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||||||||| |||||||||||||||||    
T  34853787 cgtttaaggtgttttactctgatttatgctaaaaaa 34853822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 55 - 282
Target Start/End: Original strand, 16326315 - 16326541
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  16326315 ttacgtgatttattatgacttttatgttgaagactgtttaaactggatttttattaagttatttaagttgaggccgtcgtgccaacatgatgttttatta 16326414  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    ||||||||||  |||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  16326415 agatattttccactgcattgagatttaattttaatattatgaaatgattgaaat-aatagtaattttgctatatttacgtttgaaagaagtgtagcattc 16326513  T
Q  255 cgtttaaggtgttttactatgatttatg 282  Q
    |||||||||||||||||| |||||||||    
T  16326514 cgtttaaggtgttttactctgatttatg 16326541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 136 - 318
Target Start/End: Complemental strand, 21081649 - 21081467
Alignment:
Q  136 ccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtt 235  Q
    |||||||||| ||| |||||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21081649 ccaacatgatatttcattaagatattttccgctgaattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgtt 21081550  T
Q  236 tgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||  | | ||||||||||||||||||||||    
T  21081549 tgaaagaagtgtaacatttcgtttaaggtgttttactctgatttatgctaaaaaaaattatgttggaaaaacggggtgttaca 21081467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 55 - 255
Target Start/End: Complemental strand, 36527059 - 36526859
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  36527059 ttacgtgatttattatgacttttatgttgaagactgtttagacaggatttttattaagttgttcaaattgaagccgttgtgccaacacgatgttttatta 36526960  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattg-aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatt 253  Q
    |||||||||| | ||||||||||||||||| || |||||||| | ||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  36526959 agatattttccgatgcattgagatttaatt-tggtattatgaaacgattgaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcatt 36526861  T
Q  254 cc 255  Q
    ||    
T  36526860 cc 36526859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 55 - 258
Target Start/End: Original strand, 3265817 - 3266020
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    ||||||||||||| || |||||||||||||||||||||||||   |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3265817 ttacgtgatttatcatgacttttatgttgaagactgtttagacatgatttttattaagttgttcaaattgaggccgttgtgccaacatgatgttttatta 3265916  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattg-aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatt 253  Q
    |||||||||| ||||||||||||||||||| || |||||||| | ||||| |||| |||||||||||| ||||||||| ||||||||||||| || ||||    
T  3265917 agatattttccgctgcattgagatttaatt-tggtattatgaaacgattgaaaatgaatagtaattttactatatttatgtttgaaagaagtatagcatt 3266015  T
Q  254 ccgtt 258  Q
    |||||    
T  3266016 ccgtt 3266020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 53647651 - 53647878
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||||||| ||||| || | || | ||||| |||||| |||||||||||| |||    
T  53647651 tgtttaaattggattttaattaagttgtttaagttgaggccgttgtgccaacataatgttgtacttagttgttttccgctgcaatgagatttaatt-tga 53647749  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||| ||||||||||||||| | |||| || ||||||||| |||||||||| ||||    
T  53647750 tgacatatgatgattgaaataaatagtaattttactatattcatatttaaaagaagtgtaacatcctgttt-agttgttttactttgatttatgcaaaaa 53647848  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    || |||| ||||  |||||||| |||||||    
T  53647849 aaattcatgttgagaaaacgggatgttaca 53647878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 16727704 - 16727490
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||||    
T  16727704 ttttaataagttgtttaagttgaggccattgtgccaacatgatgttaaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgat 16727606  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||||| ||||||| |  |||| |||||||||| ||| | |||| || ||||||||| | |||||||| |||||| ||||||||||     
T  16727605 tgaaataaatagtaattttactatattcatatttgtaagaagtgtagcatcctgttttagttgttttactctaatttatgcaaaaaaaattcaagttggg 16727506  T
Q  303 aaaacggggtgttaca 318  Q
    |||| || ||||||||    
T  16727505 aaaatggagtgttaca 16727490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 22308415 - 22308641
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| |||||||||||||||||| |||||||||||  | | || | |||||  ||||| |||||||||||| |||    
T  22308415 tgtttaaactggattttaattaagttgtttaagttgaggccgttgtgctaacatgatgttgaacttagttgttttccactgcaatgagatttaatt-tga 22308513  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  |||||||| |||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||    
T  22308514 tgacatatgatgattgtaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaa 22308611  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||| ||||||||||    
T  22308612 aatttcaagttggaaaaacagggtgttaca 22308641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 89 - 318
Target Start/End: Complemental strand, 14440326 - 14440100
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||| | ||||||||||| ||||||||||||||||||||||||||||||  | | || | ||||| ||| || |||||||||||| |||    
T  14440326 tgtttaaactggattataattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctacaatgagatttaatt-tga 14440228  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  |||||||||||||||| |||||||| |||||||    ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| ||||    
T  14440227 tgacatatgatgattgaaataaattgtaattttactatattcttatttgaaagaagtgtatcatcctgttta-gttgttttactctgatttatgcaaaaa 14440129  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    |||| |||||||| ||||||||||||||||    
T  14440128 aatt-caagttgggaaaacggggtgttaca 14440100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 76 - 318
Target Start/End: Complemental strand, 9643791 - 9643551
Alignment:
Q  76 ttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattg 174  Q
    |||||||||||| | || |||| |||||||| | | ||||||| ||||||||||||||||||||||| || |||  ||| | || ||||| |||||||||    
T  9643791 ttatgttgaagatttgtctagactggattttaaatgagttgtttaagttgaggccgttgtgccaacacgaagttgaatttaaatgttttccgctgcattg 9643692  T
Q  175 agatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactat 274  Q
    |||||||| | ||||   ||||||||||||||||||||||| ||||| |||||||||  ||| ||||||||||| ||| | |||| || |||||||||||    
T  9643691 agatttaaat-tgatgacatgagatgattgaaataaatagt-attttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactat 9643595  T
Q  275 ga-tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    || ||||||| |||||| |||||||||| ||||| ||||||||||    
T  9643594 gattttatgc-aaaaaaattcaagttgggaaaacagggtgttaca 9643551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 15025089 - 15025302
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| || |||||| ||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||||    
T  15025089 ttttaataagttgtttaaattgaggtcgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgat 15025187  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||| | ||| |||||||||  ||| ||||||||||| ||| | |||| || || |||||| ||||||||| ||||||| ||||||||||     
T  15025188 tgaaataaatagttactttactatatttatatttaaaagaagtgtagcatcctgttttagttg-tttactctgatttatg-taaaaaaattcaagttggg 15025285  T
Q  303 aaaacggggtgttacaa 319  Q
    |||||||||||||||||    
T  15025286 aaaacggggtgttacaa 15025302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 20416651 - 20416439
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||| | ||||||||||  | ||||||  ||| | || ||||| ||||||||||||||||| | |||||  ||||||||||    
T  20416651 ttttaataagttgtttaagttgacgtcgttgtgccattacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgataacatgagatgat 20416553  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||| | |||| ||||  ||||||||||||||| ||| | |||| || || |||||| |||||||||| |||||| ||||||||||     
T  20416552 tgaaataaatagtaattctactatgtttatatttgaaagaagtgtagcatcctgttttagttg-tttactctgatttatgc-aaaaaaattcaagttggg 20416455  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||| ||||||||    
T  20416454 aaaacggagtgttaca 20416439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 75 - 321
Target Start/End: Original strand, 12507593 - 12507836
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| || ||||| || ||||| ||| ||||||||||||| ||||||| ||| | || ||||| ||||||||    
T  12507593 tttatgttgaagatttgtctagactggattttaat-aagttatttaagttaaggtcgttgtgccaacacgatgtttaatttaaatgttttccgctgcatt 12507691  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    |||||||||||   | |  ||||||||||||||||| ||||||||||||||||||||| | ||  ||||| |||| ||| | |||| || |||||||||     
T  12507692 gagatttaatttgtagac-atgagatgattgaaatatatagtaattttgctatatttatgattataagaaatgtagcatcctgttt-agttgttttactc 12507789  T
Q  274 tgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||  ||||||  ||||||||| |||||| ||||||||||||    
T  12507790 tgatttatg-aaaaaaaaatcaagttgggaaaacgtggtgttacaatt 12507836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 35066410 - 35066567
Alignment:
Q  160 ttttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgttt 259  Q
    ||||||||||||||||||||||| | ||||   ||||| ||||||||| ||||||||||||| |||||||||  ||||||||||||| | ||| | ||||    
T  35066410 ttttctgctgcattgagatttaaat-tgatgacatgagttgattgaaacaaatagtaattttactatatttatatttgaaagaagtgcatcatcctgttt 35066508  T
Q  260 aaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
     || || |||||| |||||||||| |||||| |||||||||| |||||| |||||||||||    
T  35066509 tagttg-tttactctgatttatgc-aaaaaaattcaagttgggaaaacgaggtgttacaat 35066567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 8492991 - 8493204
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| |||||||| || |||||||||||  ||| |  ||| | || ||||| |||||||| | |||||| | ||||   ||||||||||    
T  8492991 ttttaataagttgtttaagttgagaccattgtgccaacacaatgatgaatttaaatgttttccgctgcattaaaatttaaat-tgatcacatgagatgat 8493089  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||| ||||| |||| ||||   |||||||||||  | ||| | |||| || ||||| ||| ||||| |||| ||||||||||||||||||    
T  8493090 tgaaataaatagtcattttactatgtttatacttgaaagaagtacagcatcctgttttagttgttt-actctgattcatgc-aaaaaatttcaagttgga 8493187  T
Q  303 aaaacggggtgttacaa 319  Q
    |||||||||||||||||    
T  8493188 aaaacggggtgttacaa 8493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 318
Target Start/End: Original strand, 42328169 - 42328287
Alignment:
Q  198 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaag 297  Q
    |||||||||||| ||||||||||||||||||||| | ||  |||||||||| ||| | |||| || ||||||||| |||||||||| |||||| ||||||    
T  42328169 atgattgaaatatatagtaattttgctatatttatgattataagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaag 42328266  T
Q  298 ttggaaaaacggggtgttaca 318  Q
    |||| |||| |||||||||||    
T  42328267 ttgggaaaatggggtgttaca 42328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 315
Target Start/End: Complemental strand, 4874740 - 4874624
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  4874740 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttta-gctgttttactctgatttatgc-aaaaaatttcaa 4874643  T
Q  297 gttggaaaaacggggtgtt 315  Q
    ||||| |||||||||||||    
T  4874642 gttgggaaaacggggtgtt 4874624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 2843341 - 2843460
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||||  ||||| | ||  ||||| |||||||||| ||||||||||||    
T  2843341 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcattatgttta-gttgaattactctgatttatgc-aaaaaatttcaa 2843438  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    |||||||||||||| |||||||    
T  2843439 gttggaaaaacgggatgttaca 2843460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 17325850 - 17325970
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||| ||||| |||||| |||||    
T  17325850 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatctatgcaaaaaaaattcaa 17325948  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||  ||||||||||||||||    
T  17325949 gttgagaaaacggggtgttaca 17325970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 41174428 - 41174547
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  41174428 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 41174525  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||||||| |||||||    
T  41174526 gttgggaaaacgggatgttaca 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 44268618 - 44268499
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| ||||||||| ||||||| |||||    
T  44268618 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatg-taaaaaaattcaa 44268521  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    |||||  |||||||||||||||    
T  44268520 gttggggaaacggggtgttaca 44268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 12513680 - 12513778
Alignment:
Q  131 ttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatattt 230  Q
    |||||||||||  |||||| ||| | || ||||| ||||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||||||||||    
T  12513680 ttgtgccaacacaatgtttaatttaaatgttttccgctgcattgagatttaatt-tgatgacatgagatgattgaaatatatagtaattttgctatattt 12513778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 193 - 318
Target Start/End: Original strand, 52312197 - 52312320
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaat 291  Q
    ||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| |||   | |||  ||  |||||| ||| ||||||| |||||||    
T  52312197 atgagatgattgaaataaatagtaattttactatatttatattttaaagaagtgtagcatcatgatta--gttgtttactctgattttatgcaaaaaaat 52312294  T
Q  292 ttcaagttggaaaaacggggtgttaca 318  Q
    || ||||||||||||||||||||||||    
T  52312295 tt-aagttggaaaaacggggtgttaca 52312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 315
Target Start/End: Complemental strand, 4853006 - 4852890
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  4853006 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 4852909  T
Q  297 gttggaaaaacggggtgtt 315  Q
    ||||| |||||||||||||    
T  4852908 gttgggaaaacggggtgtt 4852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 75 - 318
Target Start/End: Complemental strand, 19574242 - 19574002
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||||| |||||| || |||||||| ||||| ||| ||||||||||  | ||||||  ||| |  | ||||| ||||||||    
T  19574242 tttatgttgaagatttgtctagattagattttaat-aagttgtttaagttaaggtcgttgtgccattacgatgttgaatttaattgttttccgctgcatt 19574144  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    ||||||||| | ||||   |||||||||||||||| |||||||||||| |||||| ||  | | ||||||||||| ||| | ||||   ||  ||||||     
T  19574143 gagatttaaat-tgatgacatgagatgattgaaattaatagtaattttactatatata--tattaaagaagtgtagcatcctgtttttagttgtttactc 19574047  T
Q  274 tga-tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||| ||||||| |||||| |||||||||| ||||||||||||||||    
T  19574046 tgattttatgc-aaaaaaattcaagttgggaaaacggggtgttaca 19574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 51609063 - 51609145
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  51609063 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaat 51609145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 16840887 - 16840968
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| ||||||| ||||||| |||||||||    
T  16840887 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttaagttgggaaaacggagtgttacaa 16840968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 3801264 - 3801224
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  3801264 aaagaagtgtaacattccgtttaaggtgttttactctgatt 3801224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 20250617 - 20250657
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  20250617 aaagaagtgtaacattccgtttaaggtgttttactctgatt 20250657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 10556298 - 10556215
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||||    
T  10556298 aaagaagtgtaacattctgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaatt 10556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 24341509 - 24341543
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||||||||||||||||||||||||||||    
T  24341509 aaagaagtgtaacattccgtttaaggtgttttact 24341543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 19885677 - 19885769
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||| | ||| | |||| || ||||||||| |||||||||| ||||||    
T  19885677 gatgattgagataattagtaattttactatattcagatttgaaagaagtgcagcatcctgttt-agttgttttactctgatttatgcaaaaaaa 19885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11911964 - 11911924
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  11911964 aaagaagtgtaatattccgtttaaggtgttttactctgatt 11911924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 29546788 - 29546828
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  29546788 aaagaagtgtaacattctgtttaaggtgttttactctgatt 29546828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 38313630 - 38313670
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  38313630 aaagaaatgtaacattccgtttaaggtgttttactctgatt 38313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 10952966 - 10953041
Alignment:
Q  246 gtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||||    
T  10952966 gtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaatt 10953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 11561274 - 11561239
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||| |||||||||||||||||||||||||||||    
T  11561274 aaaaaaattcaagttggaaaaacggggtgttacaat 11561239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 24554133 - 24554245
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga--tttatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||||| || ||||||  ||| |||| |||||||||| | |||| || || |||||| |||  ||||||| ||||| ||||||||||| |    
T  24554133 aataaatagtaattttactctatttatcttttaaagtagtgtaacatcctgttttagttg-tttactctgatgtttatgc-aaaaactttcaagttggga 24554230  T
Q  304 aaacggggtgttaca 318  Q
    ||||||| |||||||    
T  24554231 aaacgggatgttaca 24554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 24557195 - 24557307
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga--tttatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||||| || ||||||  ||| |||| |||||||||| | |||| || || |||||| |||  ||||||| ||||| ||||||||||| |    
T  24557195 aataaatagtaattttactctatttatcttttaaagtagtgtaacatcctgttttagttg-tttactctgatgtttatgc-aaaaactttcaagttggga 24557292  T
Q  304 aaacggggtgttaca 318  Q
    ||||||| |||||||    
T  24557293 aaacgggatgttaca 24557307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 18898736 - 18898702
Alignment:
Q  244 gtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||| |||||    
T  18898736 gtgtaacattccgtttaaggtgttttactctgatt 18898702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 272
Target Start/End: Complemental strand, 23172761 - 23172727
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttact 272  Q
    ||||||||||||| |||||||||||||||||||||    
T  23172761 aaagaagtgtaacgttccgtttaaggtgttttact 23172727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 23273951 - 23273913
Alignment:
Q  240 agaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  23273951 agaagtgtagcattccgtttaaggtgttttactctgatt 23273913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 1209627 - 1209684
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 262  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  1209627 aaataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 1209684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 1990344 - 1990373
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  1990344 tgccaacatgatgttttattaagatatttt 1990373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 3265896 - 3265925
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  3265896 tgccaacatgatgttttattaagatatttt 3265925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 11887873 - 11887917
Alignment:
Q  276 atttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||    
T  11887873 atttatgcaaaaaaatt-caagttgggaaaacggggtgttacaatt 11887917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 13178694 - 13178653
Alignment:
Q  277 tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||| ||||||| |||||||||| |||||||||||||||    
T  13178694 tttatgcaaaaaaatatcaagttggataaacggggtgttaca 13178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 16326394 - 16326423
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  16326394 tgccaacatgatgttttattaagatatttt 16326423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 17206178 - 17206137
Alignment:
Q  277 tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||| |||||| |||||||||| ||||||||||||||||    
T  17206178 tttatgcaaaaaaaattcaagttgggaaaacggggtgttaca 17206137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 17259863 - 17259896
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||| ||||||||||||||||    
T  17259863 aaaaaatttcaagttgggaaaacggggtgttaca 17259896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 34853667 - 34853696
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  34853667 tgccaacatgatgttttattaagatatttt 34853696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 18879108 - 18879072
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactat 274  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18879108 aaagaggtgtaacattccgtttaagatgttttactat 18879072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 208; Significance: 1e-113; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 55 - 318
Target Start/End: Complemental strand, 19878659 - 19878397
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  19878659 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttt-atta 19878561  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  19878560 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtagcattc 19878461  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  19878460 cgtttaaggtgttttactctgatttatgctaaaaaaattcaagttgggaaaacagggtgttaca 19878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 55 - 321
Target Start/End: Complemental strand, 24977518 - 24977250
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  24977518 ttacgtgatttactatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 24977419  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  24977418 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 24977320  T
Q  255 cgtttaaggtgttttactatgatttatgct---aaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||   ||||||  ||||||||| ||| |||||||||||||||    
T  24977319 cgtttaaggtgttttactctgatttatgctataaaaaaaaatcaagttgggaaatcggggtgttacaatt 24977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 55 - 212
Target Start/End: Original strand, 41682486 - 41682642
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41682486 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 41682585  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaat 212  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  41682586 agatattttccgctgcattgagatttaatt-tgatattatgaaatgattgaaataaat 41682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 19664342 - 19664100
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| || |||||||| ||||||||||||||||||||||| ||||||| ||| | || ||||| |||||||    
T  19664342 ttttatgttgaagatttgtttaaactggattttaat-aagttgtttaagttgaggccgttgtgccaacacgatgtttaatttaaatgttttccgctgcat 19664244  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||| | ||||   ||||||||| ||||||||||||||||||| ||||||| |  |||| |||||||||| ||| | |||| || ||||||||     
T  19664243 tgagatttaaat-tgatgacatgagatgaatgaaataaatagtaattttactatattcatatttgtaagaagtgtagcatcctgttttagttgttttaca 19664145  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
     |||||||||| |||||| |||||||||||||||||||||||||||    
T  19664144 ctgatttatgc-aaaaaaattcaagttggaaaaacggggtgttaca 19664100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 53 - 318
Target Start/End: Complemental strand, 23946856 - 23946597
Alignment:
Q  53 tattacgtgatttattataacttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgtttta 151  Q
    |||||||| ||||||||| | |||||||||||||| | || |||| |||||||| || |||||||| |||||||||||||||||||||||  |||||  |    
T  23946856 tattacgt-atttattatga-ttttatgttgaagatttgtctagactggattttaat-aagttgtttaagttgaggccgttgtgccaacacaatgttgaa 23946760  T
Q  152 ttaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaaca 251  Q
    || | || ||||| ||||||||||||||||| | ||||   ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||    
T  23946759 tttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagca 23946661  T
Q  252 ttccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    | | |||| || || |||||| ||||||||||  |||| ||||||||||| ||||||||||||||||    
T  23946660 tcctgttttagttg-tttactctgatttatgc--aaaattttcaagttgggaaaacggggtgttaca 23946597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 103 - 319
Target Start/End: Complemental strand, 17217116 - 17216903
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||| ||||||||| | ||||||| ||| | || ||||| ||||||||||||||||| | ||||   ||||||||||    
T  17217116 ttttaataagttgtttaagttgaggccattgtgccaatacgatgtttaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgat 17217018  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||||| |||||||||  |||||| |||||| | ||||| |||  || || |||||| |||||||||| ||||||||||||||||||    
T  17217017 tgaaataaatagtaattttactatatttatatttgaaggaagtgcagcattctgttgtagttg-tttactctgatttatgc-aaaaaatttcaagttgga 17216920  T
Q  303 aaaacggggtgttacaa 319  Q
    |||||||| ||||||||    
T  17216919 aaaacgggctgttacaa 17216903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 20180297 - 20180525
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||| ||||| |||||||| |||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  20180297 tgtttaaactggattttaattaaattgtttaagttgagaccgttgtgccaacatgatgttaaacttagttgttttccgctgcaatgagatttaatt-tga 20180395  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||| | |||| || ||||||||| |||||||||| ||||    
T  20180396 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtaacatcctgttt-agttgttttactctgatttatgc-aaaa 20180493  T
Q  289 aatttcaagttggaaaaacggggtgttacaat 320  Q
    || ||||||||| |||||||||||||||||||    
T  20180494 aaattcaagttgaaaaaacggggtgttacaat 20180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 319
Target Start/End: Complemental strand, 21398477 - 21398249
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||||||| ||||||||||||||||||||  | |  | | ||||  |||||| |||||||||||| |||    
T  21398477 tgtttaaactggattttaattaagttgtttaagttgaggtcgttgtgccaacatgatgttgaactttgttctttttcgctgcaatgagatttaatt-tga 21398379  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| |  |||| | ||||||||| |||||||||| ||||    
T  21398378 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgcaaaaa 21398280  T
Q  289 aatttcaagttggaaaaacggggtgttacaa 319  Q
    || ||||||||||||||||||||||||||||    
T  21398279 aaattcaagttggaaaaacggggtgttacaa 21398249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 319
Target Start/End: Complemental strand, 21792970 - 21792742
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||||||| ||||||||||||||||||||  | |  | | ||||  |||||| |||||||||||| |||    
T  21792970 tgtttaaactggattttaattaagttgtttaagttgaggtcgttgtgccaacatgatgttgaactttgttctttttcgctgcaatgagatttaatt-tga 21792872  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| |  |||| | ||||||||| |||||||||| ||||    
T  21792871 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctattta-gttgttttactctgatttatgcaaaaa 21792773  T
Q  289 aatttcaagttggaaaaacggggtgttacaa 319  Q
    || ||||||||||||||||||||||||||||    
T  21792772 aaattcaagttggaaaaacggggtgttacaa 21792742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 25849989 - 25850232
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | || ||||||| ||||||||| ||||||||||| ||||||||||| ||||||  | | || | ||||| |||||||    
T  25849989 ttttatgttgaagatttgtttaaactgaatttttaataagttgtttaagttgaggccattgtgccaacacgatgttgaacttagttgttttccgctgcat 25850088  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||||| ||||   ||  ||||||||||||||||||||||||| |||||||||   ||| |||||||||| ||| | |||| || |||||||||    
T  25850089 tgagatttaatt-tgatgacatacgatgattgaaataaatagtaattttactatatttataattgtaagaagtgtagcatcctgttt-agttgttttact 25850186  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
     |||||||||| ||||||  ||||||||| |||| |||||||||||    
T  25850187 ctgatttatgcaaaaaaaaatcaagttgggaaaatggggtgttaca 25850232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 39696365 - 39696570
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||| ||||||||||||||||| ||||||| ||| | || ||||| ||||||||||||||||||| |||||  ||||||||||    
T  39696365 ttttaataagttgtttaagttaaggccgttgtgccaacacgatgtttaatttaaatgttttccgctgcattgagatttaatt-tgataacatgagatgat 39696463  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    |||||||||||||| |||| |||||||||  |||||| |||||||| ||| |  |||   ||  || ||| |||||||||| ||||||||||||||||      
T  39696464 tgaaataaatagtatttttactatatttatatttgaaggaagtgtagcatcctttttttagttgttcactctgatttatgc-aaaaaatttcaagttgag 39696562  T
Q  303 aaaacggg 310  Q
    ||||||||    
T  39696563 aaaacggg 39696570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 23417904 - 23417664
Alignment:
Q  74 ttttatgttgaagactg-tttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| |  |||| | |||||||| ||||||||||| ||||||||| |||||||||||| |||||||  ||| | || ||||| |||||||    
T  23417904 ttttatgttgaagatttatttaaactggattttaattaagttgtttaagttgaggtcgttgtgccaacctgatgttgaatttaaatgttttccgctgcat 23417805  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||| | ||||   ||||| |||||| |||||||||||| ||| ||||||| |  ||||||||||||||| |||   |||||  ||  ||||||    
T  23417804 tgagatttaaat-tgatgacatgagttgattg-aataaatagtaactttactatattaatatttgaaagaagtgtagcatcttgttta--gttgtttact 23417709  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
     |||||||||| ||||| ||||||||||||||||||||||||||||    
T  23417708 ctgatttatgc-aaaaactttcaagttggaaaaacggggtgttaca 23417664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 20453545 - 20453332
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| |||||| || ||||| ||| ||||||||||  | ||||||  ||| |  | ||||||||||||||||||||||| | ||||   ||||||||||    
T  20453545 ttttaataagttttttaagttaaggtcgttgtgccattacgatgttgaatttaattgttttctgctgcattgagatttaaat-tgatgacatgagatgat 20453447  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    |||||||||||||| |||| || ||||||  |||||| |||||||| ||| | ||||   ||  |||||| |||||||||| ||||||||||||||||||    
T  20453446 tgaaataaatagtatttttactttatttatatttgaaggaagtgtagcatcctgtttttagttgtttactctgatttatgc-aaaaaatttcaagttgga 20453348  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||||||||||||    
T  20453347 aaaacggggtgttaca 20453332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 109 - 318
Target Start/End: Complemental strand, 8669 - 8463
Alignment:
Q  109 taagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaat 208  Q
    ||||||||| ||||||||||||||||||||||| ||||||  ||  | || ||||| ||||||||||||||||| | ||||   ||||||||||||||||    
T  8669 taagttgtttaagttgaggccgttgtgccaacaagatgttgaatctaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgattgaaat 8571  T
Q  209 aaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacg 308  Q
    ||||||||| ||| |||||||||  ||||| ||||||||| ||| | |||  || || |||||| |||||||||| ||||||  |||| |||| ||||||    
T  8570 aaatagtaactttactatatttaaatttgatagaagtgtagcatcctgttctagttg-tttactctgatttatgc-aaaaaaaatcaaattgggaaaacg 8473  T
Q  309 gggtgttaca 318  Q
    | ||||||||    
T  8472 gagtgttaca 8463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 22585255 - 22585399
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||| ||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||||    
T  22585255 ttttaataagttgtttaagttgaggtcgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgat 22585353  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    ||||||||||||||||| | |||| ||||  |||||||||||||||    
T  22585354 tgaaataaatagtaattatactatgtttatatttgaaagaagtgta 22585399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 103 - 318
Target Start/End: Original strand, 17908451 - 17908662
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||||||  | ||||||| ||| | || ||||| ||| || |||||||||| | ||||   ||||||||||    
T  17908451 ttttaataagttgtttaagttgaggccgttgtgccattacgatgtttaattta-atgttttccgctacaatgagatttaaat-tgatgacatgagatgat 17908548  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaatttcaagttgg 301  Q
    ||||||||||||||||||| ||||| |||  ||| ||||||||||  ||| | |||||  ||  |||||| ||| ||||||| |||||| ||||||||||    
T  17908549 tgaaataaatagtaatttttctataattatattttaaagaagtgtggcatcctgttta--gttgtttactctgattttatgc-aaaaaaattcaagttgg 17908645  T
Q  302 aaaaacggggtgttaca 318  Q
     ||||||||||||||||    
T  17908646 gaaaacggggtgttaca 17908662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 22333720 - 22333593
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatt 292  Q
    ||||||||||| |||||| |||||| ||| | |||||||  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |    
T  22333720 atgagatgattcaaataattagtaactttaccatatttatatttgaaagaagtgtagcatcctgttttagttgttttactctgatttatgc-aaaaaaat 22333622  T
Q  293 tcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||| ||||| |||||||||||||    
T  22333621 tcaagttgggaaaacagggtgttacaatt 22333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 19881330 - 19881268
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgtt 117  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  19881330 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtt 19881268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 104 - 318
Target Start/End: Complemental strand, 23888256 - 23888044
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| ||||||||| ||||||||||||||||||||  | ||||||| ||| | || ||||| ||||||||||||||||| | ||||   |||||||||||    
T  23888256 tttaataagttgtttaagttgaggccgttgtgccattacgatgtttaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgatt 23888158  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaa-gaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
     ||||||||||||| ||| |||||||||  ||| ||| |||||||| ||| |  ||||  ||  |||||| | |||||||  ||||||  | |||||||     
T  23888157 aaaataaatagtaaatttactatatttatattttaaaggaagtgtagcatcctattta--gttgtttactctaatttatgaaaaaaaaaattaagttggg 23888060  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||||||||||||    
T  23888059 aaaacggggtgttaca 23888044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 22242606 - 22242476
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgt----ttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    ||||||||||||||||||||||||||||| |||||| ||  |    |||||||||||||| ||| | |||| || ||||| ||| |||||||||| ||||    
T  22242606 atgagatgattgaaataaatagtaattttactatatatatatatatttgaaagaagtgtagcatcctgttttagttgttt-actctgatttatgc-aaaa 22242509  T
Q  289 aatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||  |||||||||||||||||||    
T  22242508 aatttcaagttgcgaaaacggggtgttacaatt 22242476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 6103459 - 6103596
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||||||  | ||||||| | | | || ||||| |||||| |||||||||| | ||||   ||||||| ||    
T  6103459 ttttaataagttgtttaagttgaggccgttgtgccactacgatgtttaacttaaatgttttccgctgcaatgagatttaaat-tgatgacatgagataat 6103557  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaag 241  Q
    ||||||||||||||||||| |||||||||  ||||||||    
T  6103558 tgaaataaatagtaattttactatatttatatttgaaag 6103596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 39937919 - 39938039
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||| ||||||||| ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  39937919 gatgattgagataattagtaattttactatattcagatttgagagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 39938016  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| ||||||| |||||||||    
T  39938017 gttgggaaaacggagtgttacaa 39938039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 42267338 - 42267455
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgag 197  Q
    |||||||| | ||||||||| |||||||||||||||||||||||  |||||| ||| | || ||||| ||||||||||||||||| | ||||   || ||    
T  42267338 tggattttaaataagttgtttaagttgaggccgttgtgccaacacaatgtttaatttaaatgttttccgctgcattgagatttaaat-tgatgacataag 42267436  T
Q  198 atgattgaaataaatagta 216  Q
    |||||||||||||||||||    
T  42267437 atgattgaaataaatagta 42267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 12576140 - 12576061
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||||||||||||||||| |||||| |   | ||| ||||||||||| ||||||||||||||||    
T  12576140 aagaagtgtgacattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttaca 12576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 283
Target Start/End: Complemental strand, 18759537 - 18759368
Alignment:
Q  113 ttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt-gagatttaattctgatattatgagatgattgaaataaa 211  Q
    ||||| || |||||||| ||||||||||| ||||||  ||| | || ||||| |||||||| ||||||||| | ||||   |||||||||||||||| ||    
T  18759537 ttgtttaaattgaggccattgtgccaacacgatgttgaatttaaatgttttccgctgcatttgagatttaaat-tgatgacatgagatgattgaaatgaa 18759439  T
Q  212 tagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgc 283  Q
    |||||| ||| ||||||||   ||||||||||||||| ||| | |||| || || |||||| ||||||||||    
T  18759438 tagtaactttactatatttgtatttgaaagaagtgtagcatccagttttagttg-tttactctgatttatgc 18759368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 42267772 - 42267880
Alignment:
Q  208 taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt-atgctaaaaaatttcaagttggaaaaa 306  Q
    ||||||||| |||| |||||||||  ||| ||||||||||||||| ||| || || ||||| ||| |||||| |||| ||||||||||||||||||||||    
T  42267772 taaatagtatttttactatatttatattttaaagaagtgtaacat-ccgatttagttgttt-actctgattttatgc-aaaaaatttcaagttggaaaaa 42267868  T
Q  307 cggggtgttaca 318  Q
    ||||||||||||    
T  42267869 cggggtgttaca 42267880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 45118890 - 45119010
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| |||   |||| || ||||||||| |||||||||| |||||| || ||    
T  45118890 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcatgttt-agttgttttactctgatttatgcaaaaaaaatt-aa 45118987  T
Q  297 gttggaaaaacggggtgttacaa 319  Q
    ||||| ||||| |||||||||||    
T  45118988 gttgggaaaacagggtgttacaa 45119010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 22243962 - 22243859
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| || |||||||| ||||||||||||||||||||  ||||||||| | | | |||||||| ||||||||    
T  22243962 tttatgttgaagatttgtctagactggattttaat-aagttgtttaagttgaggccgttgtgccattatgatgtttaaattaaatattttccgctgcatt 22243864  T
Q  174 gagat 178  Q
    |||||    
T  22243863 gagat 22243859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 25066559 - 25066478
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  25066559 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaa 25066478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 27943406 - 27943446
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27943406 aaagaagtgtaacattccgtttaaggtgttttactctgatt 27943446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 17980448 - 17980482
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  17980448 taaaaaatttcaagttggaaaaacggggtgttaca 17980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 18821059 - 18821093
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  18821059 taaaaaatttcaagttggaaaaacggggtgttaca 18821093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 6574859 - 6574976
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| ||||   ||||||| ||  | ||| |||||  ||||| ||||  ||||||||||||    
T  6574859 aaataaatagtaattttactctatttatcttttaaagaagtgtgacatcatgtttaagttgaat-actctgattattatgc-aaaagttttcaagttgga 6574956  T
Q  303 aaaacggggtgttacaattt 322  Q
    ||||||||||||||||||||    
T  6574957 aaaacggggtgttacaattt 6574976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 22261200 - 22261280
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||| |||||||||||| | ||   |||||||||||||  |  ||| ||||||||||| ||||||||||||||||    
T  22261200 aaagaagtgtgacattccgtttatgttgaaatactatgatttatatttgaaattttcaagttgggaaaacggggtgttaca 22261280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 25648248 - 25648284
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25648248 aagtgtaacattccgtttaaggtgttttactctgatt 25648284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 42561422 - 42561461
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgat 277  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  42561422 aaagaagtgtaatattccgtttaaggtgttttactctgat 42561461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 24977439 - 24977410
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  24977439 tgccaacatgatgttttattaagatatttt 24977410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 31724916 - 31724949
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||| ||||||||||||||||    
T  31724916 aaaaaatttcaagttgggaaaacggggtgttaca 31724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 41682565 - 41682594
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  41682565 tgccaacatgatgttttattaagatatttt 41682594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 45472140 - 45472173
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||| |||||    
T  45472140 aaaaaatttcaagttggaaaaacggggtattaca 45472173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 17622334 - 17622370
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||||| |||||||||| |||||    
T  17622334 aagtgtaacattccgtttaacgtgttttactctgatt 17622370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 55 - 318
Target Start/End: Original strand, 29849454 - 29849717
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    ||||||||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29849454 ttacgtgatttgttatgacttttatgttgaagactgtttaaactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 29849553  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  29849554 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttgctatatttacgttttaaagaattgtagcattc 29849653  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    | |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  29849654 cttttaaggtgttttactctgatttatgctaaaaaatttcaagttgggaaaacgggatgttaca 29849717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 55 - 306
Target Start/End: Complemental strand, 13763210 - 13762959
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||  |    
T  13763210 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttacca 13763111  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||   |||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||     
T  13763110 agatatttttcactgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtaccattt 13763011  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaa 306  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  13763010 cgtttaaggtgttttactctaatttatgctaaaaaatttcaagttgggaaaa 13762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 55 - 320
Target Start/End: Original strand, 29417854 - 29418119
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  29417854 ttacgtgatttattatgacttttatgttgaagactgtttagactgaatttttattaagttgtttaagtcgaggccgtcgtgccaacatgatgttttatta 29417953  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  29417954 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaattttgctatatttatgtttgaaagaagtgtagcattc 29418052  T
Q  255 cgtttaaggtgttttactatgatttatgct-aaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||   ||||||||||||||||||    
T  29418053 cgtttaaggtgttttactcttatttatgctaaaaaaatttcaagttaagaaaacggggtgttacaat 29418119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 55 - 278
Target Start/End: Original strand, 5112214 - 5112436
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  5112214 ttacgtgatttactatgacttttatgttgaagactgtttagactgaatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 5112313  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||    
T  5112314 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtaacattc 5112412  T
Q  255 cgtttaaggtgttttactatgatt 278  Q
    ||||||||| |||||||| |||||    
T  5112413 cgtttaaggcgttttactctgatt 5112436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 20412542 - 20412768
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||| ||||||||||||||||||||||||  | | || | |||||||||||| |||||||||||| |||    
T  20412542 tgtttaaactggattttaattaagttgtttaagttaaggccgttgtgccaacatgatgttgaacttagttgttttctgctgcaatgagatttaatt-tga 20412640  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||    
T  20412641 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaa 20412738  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||| |||| ||||||||||||||||    
T  20412739 aatttcaaattgggaaaacggggtgttaca 20412768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 89 - 321
Target Start/End: Original strand, 23017885 - 23018114
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| |||||||||| ||||||||||| |||||| |||| ||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  23017885 tgtttaaattggattttaattaagttgtttaagttgcggccattgtgccaacatgatgttgaacttagttgttttcagctgcaatgagatttaatt-tga 23017983  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  |||||||||||| || |||   |||| || ||||||||| |||||||||| ||||    
T  23017984 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtttagcatcttgttt-agttgttttactctgatttatgc-aaaa 23018081  T
Q  289 aatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||| ||||| |||||||||||||    
T  23018082 aatttcaagttgggaaaacagggtgttacaatt 23018114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 75 - 318
Target Start/End: Original strand, 24551229 - 24551470
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | ||||| | |||||| ||| |||||| || |||||||| || ||||||||||| ||||||  | | || | ||||| |||||| |    
T  24551229 tttatgttgaagatttgtttaaactggattattaataagttatttaagttgagaccattgtgccaacacgatgttgaacttagttgttttccgctgcaat 24551328  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
     |||||||||| ||||   ||  ||||||||||||| ||||||||||||||||||||| | ||  |||||||||||||| | |||| || |||||||||     
T  24551329 aagatttaatt-tgatgacatatgatgattgaaatatatagtaattttgctatatttatgattataagaagtgtaacatcctgttt-agttgttttactc 24551426  T
Q  274 tgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||    
T  24551427 tgatttatgc-aaaaaaattcaaattggaaaaacggggtgttaca 24551470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 103 - 318
Target Start/End: Original strand, 17757542 - 17757753
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| |||||||| |||||||||||| || |||||  |  |||||| | | | ||||||||||||||||| |||||||| | ||||   ||||||||||    
T  17757542 ttttaataagttgtcgaagttgaggccattatgccattacaatgtttaactta-atattttctgctgcattaagatttaaat-tgatgacatgagatgat 17757639  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    | ||||||||||||||||| |||||||||  | ||||||||||||| |||   |||| || || |||||| |||||||||| ||||||  |||||||||     
T  17757640 ttaaataaatagtaattttactatatttatatctgaaagaagtgtagcatcttgttttagttg-tttactctgatttatgc-aaaaaaaatcaagttggg 17757737  T
Q  303 aaaacggggtgttaca 318  Q
    ||||| ||||||||||    
T  17757738 aaaacagggtgttaca 17757753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 31732638 - 31732519
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||||||| | |||| |  ||||||||| |||||||||| ||||||||||||    
T  31732638 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtaacatcctgttt-acttgttttactctgatttatgc-aaaaaatttcaa 31732541  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||| |||||||||||    
T  31732540 gttgggaaaatggggtgttaca 31732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 27127362 - 27127481
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||| ||||||| ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  27127362 gatgattgagataattagtaattttactatattcagatttgaaataagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 27127459  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||||||| |||||||    
T  27127460 gttgggaaaacgggatgttaca 27127481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 31736393 - 31736606
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||| ||  | ||| ||| ||| | || ||||| |||||| |||||||||| | ||||   | ||||||||    
T  31736393 ttttaataagttgtttaagttgaggccgttgtgtcattacgatatttaattta-atgttttccgctgcaatgagatttaaat-tgatgacaggagatgat 31736490  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaatttcaagttgg 301  Q
    ||||||||||||||||||| ||||| |||| ||| ||||||||||| ||| | |||| || || |||||| ||| ||||| || |||| ||||||||||     
T  31736491 tgaaataaatagtaattttactataattacattttaaagaagtgtagcatcctgttttagttg-tttactctgattttatact-aaaattttcaagttgc 31736588  T
Q  302 aaaaacggggtgttacaa 319  Q
     ||||||| |||||||||    
T  31736589 gaaaacggtgtgttacaa 31736606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 1642088 - 1641968
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||  ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| ||||||  | ||    
T  1642088 gatgattgagataattagtaatttcactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaaattaa 1641990  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  1641989 gttgggaaaacggggtgttaca 1641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 35137643 - 35137565
Alignment:
Q  241 gaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||| |||||||||||||||||||||||||| |||||| | | | ||| ||| ||||||| |||||||||||||||||    
T  35137643 gaagtttaacattccgtttaaggtgttttactctgatttttacgagaaattttaaagttgggaaaacggggtgttacaa 35137565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 10989028 - 10989109
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||||||| | ||||| |||||||||||||||||    
T  10989028 aaagaagtgtaacattccgtttaaggtgttttactctgattaatttatgaaaattttatgttgggaaaacggggtgttacaa 10989109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 15815909 - 15815990
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||     ||| ||| | |||||||||||||||||||||||    
T  15815909 aaagaagtgtaacattccgtttaaggtgttttactctgattgatttatgaaatttttatgttggaaaaacggggtgttacaa 15815990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 21321145 - 21321064
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||    |||| ||| | ||||| |||||||||||||||||    
T  21321145 aaagaagtgtaacattccgtttaaggtgttttactctgattgatttataaaatttttatgttgggaaaacggggtgttacaa 21321064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 21681226 - 21681342
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| || || ||| |||||  |||| |||||||||||||||||||    
T  21681226 aaataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattaatatg-taaaaaatttcaagttgga 21681323  T
Q  303 aaaacggggtgttacaatt 321  Q
    |||||||||||||||||||    
T  21681324 aaaacggggtgttacaatt 21681342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 23498812 - 23498871
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacat 252  Q
    |||||||| |||||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  23498812 atgagatgtttgaaataaatagtaattttactatatttgcattttaaagaagtgtaacat 23498871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 4475089 - 4475049
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  4475089 aaagaagtgtaacattccgtttaaggtgttttactctgatt 4475049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 27222120 - 27222080
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27222120 aaagaagtgtaacattccgtttaaggtgttttactctgatt 27222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 22213142 - 22213212
Alignment:
Q  159 attttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatattt 230  Q
    |||||||||| ||||||||||||| | | || | ||||||||||||||| ||||||||||||| ||||||||    
T  22213142 attttctgctacattgagatttaaat-taatgtcatgagatgattgaaacaaatagtaattttactatattt 22213212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 272
Target Start/End: Complemental strand, 1253690 - 1253656
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||||||||||||||||||||||||||||    
T  1253690 aaagaagtgtaacattccgtttaaggtgttttact 1253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 18857086 - 18857162
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa-gttggaaaaacggggtgttaca 318  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||  |||||| || ||||| ||||||||||||||||    
T  18857086 aagtgtaacattccgtttaaggtgttttactctgattaat-ttatgaaattttaatgttgggaaaacggggtgttaca 18857162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 25737430 - 25737390
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  25737430 aaagaagtgtaacatttcgtttaaggtgttttactctgatt 25737390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 34298314 - 34298354
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  34298314 aaagaagtgtaatattccgtttaaggtgttttactctgatt 34298354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 4644706 - 4644745
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  4644706 aagaagtgtagcattccgtttaaggtgttttactctgatt 4644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 18325739 - 18325705
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||| ||||||||    
T  18325739 taaaaaatttcaagttggaaaaacggagtgttaca 18325705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 18327065 - 18326950
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| || || ||| |||||  |||| ||||||||||||||||||      
T  18327065 aataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttgggc 18326968  T
Q  304 aaacggggtgttacaatt 321  Q
    ||||||||||||||||||    
T  18326967 aaacggggtgttacaatt 18326950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 25607385 - 25607419
Alignment:
Q  287 aaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||| |||||||||||||||||||    
T  25607385 aaaatttcaagttgggaaaacggggtgttacaatt 25607419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 5112293 - 5112322
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  5112293 tgccaacatgatgttttattaagatatttt 5112322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 29417933 - 29417962
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  29417933 tgccaacatgatgttttattaagatatttt 29417962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 29849533 - 29849562
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  29849533 tgccaacatgatgttttattaagatatttt 29849562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 404 - 372
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgtttta 270  Q
    |||||||||||| ||||||||||||||||||||    
T  404 aaagaagtgtaatattccgtttaaggtgtttta 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 24644456 - 24644496
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  24644456 aaagaagtgtaacattccttttaatgtgttttactctgatt 24644496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 55 - 318
Target Start/End: Complemental strand, 15989072 - 15988809
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  15989072 ttacgtgatttattatgacttttatgttgaagactgtttagactgaatttttattaagttatttaagttgaggccgttgtgccaacatgatgttttatta 15988973  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    | |||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  15988972 aaatattttccgctgcattgagatttaattttgatatcatgaaatgattgaaataaataataattttgctatacttacgtttgaaagaagtgtagcattc 15988873  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||||    
T  15988872 cgtttaaggtgttttactctgatttatgctaaaaattttcaagttgggaaaacgaggtgttaca 15988809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 55 - 321
Target Start/End: Original strand, 4832542 - 4832815
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4832542 ttacgtgatttactatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 4832641  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  4832642 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 4832740  T
Q  255 cgtttaaggtgttttactatgatttatgct--------aaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||        ||||||  |||||||||||||||||||||||||||||    
T  4832741 cgtttaaggtgttttactctgatttatgctaaaaaaaaaaaaaaaatcaagttggaaaaacggggtgttacaatt 4832815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 55 - 278
Target Start/End: Complemental strand, 33185086 - 33184864
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||     
T  33185086 ttacgtgatttattatgacttttatgttgaagactgtttagactggattttcattaagttgtttaagttgaagccgttgtgccaacatgatgttttattt 33184987  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  33184986 agatattttccgctgcattgagatttaatt-tgatattatgagatgattgaaataaatagtaattttactatatttacgtttgaaagaagtgtagcattc 33184888  T
Q  255 cgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||    
T  33184887 cgtttaaggtgttttactctgatt 33184864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 55 - 321
Target Start/End: Original strand, 4829247 - 4829520
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  4829247 ttacgtgatttactatgacttttatgttgaagactgtttagactgaatttttattaagttgtttaagttgaggctgtcgtgccaacatgatgttttatta 4829346  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  4829347 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 4829445  T
Q  255 cgtttaaggtgttttactatgatttatgct--------aaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||||||||| |||||||||||        ||||||  |||||||||||||||||||||||||||||    
T  4829446 cgtttaaggtgttttactctgatttatgctaaaaaaaaaaaaaaaatcaagttggaaaaacggggtgttacaatt 4829520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 55 - 290
Target Start/End: Original strand, 4835837 - 4836071
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4835837 ttacgtgatttactatgacttttatgttgaagattgtttagactggatttttattaagttgtttaagttgaggccgtcgtgccaacatgatgttttatta 4835936  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| |||||    
T  4835937 agatattttccgctgcattgagatttaatttagatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagcattc 4836035  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||||||||| |||||||||||||||||    
T  4836036 cgtttaaggtgttttactctgatttatgctaaaaaa 4836071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 74 - 278
Target Start/End: Complemental strand, 14184236 - 14184033
Alignment:
Q  74 ttttatgttgaaga-ctgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| || ||||| ||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||||    
T  14184236 ttttatgttgaagaactatttagtttggattttaat-aagttgtt-aagttgaagccgttgtgccaacatgatgttttattaagatattttccgttgcat 14184139  T
Q  173 tgagatttaattctgatattatgagatgattgaaa-taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttac 271  Q
    |||||||||||| || |||||| | | |||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14184138 tgagatttaatt-tggtattataaaacgattgaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttac 14184040  T
Q  272 tatgatt 278  Q
    | |||||    
T  14184039 tctgatt 14184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 74 - 321
Target Start/End: Complemental strand, 14187775 - 14187529
Alignment:
Q  74 ttttatgttgaaga-ctgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| || ||||| ||||||||| || |||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14187775 ttttatgttgaagaactatttagtttggattttaat-aagttgtt-aagttgaagccgttttgccaacatgatgttttattaagatattttccgctgcat 14187678  T
Q  173 tgagatttaattctgatattatgagatgattgaaa-taaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttac 271  Q
    |||||||||||| ||||||||| | | |||| ||| | |||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  14187677 tgagatttaatt-tgatattataaaacgatttaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcattcagtttaaggtgttttac 14187579  T
Q  272 tatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    | |||||  |   | ||| |||||| |||| ||||| |||||||||||||    
T  14187578 tctgattgttatgataaattttcaatttgggaaaacagggtgttacaatt 14187529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 10358168 - 10358394
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| || |||||||||||||||||||||||||||  | | |  | ||||| |||||| |||||||||||| |||    
T  10358168 tgtttaaactggattttaattaagttgtttaatttgaggccgttgtgccaacatgatgttgaacttaattgttttccgctgcaatgagatttaatt-tga 10358266  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||    
T  10358267 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaa 10358364  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
     |||||||||||| ||||||||||||||||    
T  10358365 catttcaagttgggaaaacggggtgttaca 10358394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 74 - 324
Target Start/End: Complemental strand, 15607850 - 15607603
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| ||||||||||| |||||||||| |||||||||||| ||||||  ||| | || ||||| |||||||    
T  15607850 ttttatgttgaagatttgtttaaactggattttaattaagttgtttaagttgaggcggttgtgccaacacgatgttgaatttaaatgttttccgctgcat 15607751  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||| |   ||||   |||||||||||| ||||||||||||  || |  ||||||  |||||||||| |||| ||| | |||||  ||  ||||||    
T  15607750 tgagattttaaattgatgacatgagatgattg-aataaatagtaacgttaccgtatttatatttgaaagaattgtagcatcctgttta--gttgtttact 15607654  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatttgt 324  Q
     |||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  15607653 ctgatttatgc-aaaaaatttcaagttgggaaaacggggtgttacactttgt 15607603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 32467735 - 32467978
Alignment:
Q  74 ttttatgttgaagactg-tttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| |  |||| | |||||||| ||||||||||| ||||||||||||||||||||||||||| ||  ||| | || ||||| |||||||    
T  32467735 ttttatgttgaagatttatttaaactggattttaattaagttgtttaagttgaggccgttgtgccaacatgatattgaatttaaatgttttccgctgcat 32467834  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||| |   | ||   ||||| |||||| |||||||||||| ||| |||||||||  ||||||||||||||| ||| | ||||   ||  ||||||    
T  32467835 tgagattttaaattaatgacatgagttgattg-aataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgtttttagttgtttact 32467933  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
     |||| ||||| ||||||||||||||||| |||||| |||||||||    
T  32467934 ttgatatatgc-aaaaaatttcaagttgggaaaacgaggtgttaca 32467978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 318
Target Start/End: Complemental strand, 20114 - 19926
Alignment:
Q  127 gccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctat 226  Q
    ||||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||| ||||||||||||||| ||| ||||    
T  20114 gccgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgaatgaaataaatagtaactttactat 20016  T
Q  227 atttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||  ||||||||||||||| ||| | |||| | ||  |||||| ||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  20015 atttatatttgaaagaagtgtagcatcctgtttta-gttatttactctgatttatg-taaaaaaattcaagttgaaaaaacagggtgttaca 19926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 21061058 - 21060846
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| |||||||||  |||||||||    ||||||| | | | |  ||||| | ||||||||||||||| | ||||   ||||||||||    
T  21061058 ttttaataagttgtttaagttgaggttgttgtgccattccgatgtttaaattaaaagttttccgttgcattgagatttaaat-tgatgacatgagatgat 21060960  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||| | |||| |  || |||||| |||||||||| ||||||  |||||||||     
T  21060959 tgaaataaatagcaattttactatatttatgtttgaaagaagtgtaacatcctgttttaaatg-tttactctgatttatgc-aaaaaaaatcaagttggg 21060862  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||| ||||||||    
T  21060861 aaaacggagtgttaca 21060846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 14547724 - 14547605
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||| | |||| |||||||||| |||||||||  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| | ||||||||||    
T  14547724 gatgattaagataattagtaattttactatatttagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-ataaaatttcaa 14547627  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  14547626 gttgggaaaacggggtgttaca 14547605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 25089765 - 25089646
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | | ||||||| |||||||||| ||||||||||||    
T  25089765 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gtttttttactctgatttatgc-aaaaaatttcaa 25089668  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  25089667 gttgggaaaacggggtgttaca 25089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 9872113 - 9872238
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||    |  |||||| |||||||||| |||||| |||||    
T  9872113 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgtttttacttgtttactctgatttatgcaaaaaaaattcaa 9872212  T
Q  297 gttggaaaaacggggtgttacaattt 322  Q
    |||| |||||||||||||||||||||    
T  9872213 gttgaaaaaacggggtgttacaattt 9872238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 318
Target Start/End: Complemental strand, 51992295 - 51992169
Alignment:
Q  191 ttatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||  |||||||||| |||   || | || ||||||||| |||||||||  ||||||    
T  51992295 ttatgagatgattgaaatatatagtaattttgctatatttatggttataagaagtgtatcatcatgtct-agttgttttactctgatttatgtaaaaaaa 51992197  T
Q  291 tttcaagttggaaaaacggggtgttaca 318  Q
     |||||||||| |||||||  |||||||    
T  51992196 attcaagttgggaaaacggaatgttaca 51992169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 4859681 - 4859800
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |   |||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  4859681 gatgattgagataattagtaattttactatattcaaaattgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 4859778  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||||||| |||||||    
T  4859779 gttgggaaaacgggatgttaca 4859800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 16996640 - 16996521
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| || ||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| ||||||  ||||    
T  16996640 gatgattgagataattattaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaatcaa 16996543  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  16996542 gttgggaaaacggggtgttaca 16996521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 14628610 - 14628498
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| || || ||| |||||  |||| |||||||||||||||||| |    
T  14628610 aataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggga 14628513  T
Q  304 aaacggggtgttaca 318  Q
    |||||||||||||||    
T  14628512 aaacggggtgttaca 14628498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 319
Target Start/End: Complemental strand, 19733736 - 19733523
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| |||||| || ||||||||||||||||||||  | ||| ||  |||||  | ||||| |||||||||| |||||| | ||||   ||||||||| |    
T  19733736 tttaataagttatttaagttgaggccgttgtgccattacgatattaaattaa--tgttttccgctgcattgatatttaaat-tgatgacatgagatgact 19733640  T
Q  204 gaaataaatagtaattttgctatattt-acgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt-atgctaaaaaatttcaagttgg 301  Q
    |||||||||||||||| | || ||||| |  ||| |||| ||||| |||| | ||||   ||  ||||||||||||| |||| |||||||| ||||||||    
T  19733639 gaaataaatagtaattctactctattttatcttttaaagtagtgtgacatcctgtttttagttgtttactatgattttatgcaaaaaaatt-caagttgg 19733541  T
Q  302 aaaaacggggtgttacaa 319  Q
     |||||||||||||||||    
T  19733540 gaaaacggggtgttacaa 19733523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 2754512 - 2754472
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  2754512 aaagaagtgtaacattccgtttaaggtgttttactctgatt 2754472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 18210898 - 18210858
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  18210898 aaagaagtgtaacattccgtttaaggtgttttactctgatt 18210858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 30145164 - 30145124
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  30145164 aaagaagtgtaacattccgtttaaggtgttttactctgatt 30145124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 43258993 - 43259033
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  43258993 aaagaagtgtaacattccgtttaaggtgttttactctgatt 43259033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 319
Target Start/End: Original strand, 16027789 - 16028003
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||||||  |  |||||| | | | || ||||| |||||| |||||||||| | ||||   ||||||||||    
T  16027789 ttttaataagttgtttaagttgaggccgttgtgccattacaatgtttaactta-atgttttccgctgcaatgagatttaagt-tgatgacatgagatgat 16027886  T
Q  203 tgaaataaatagtaattt-tgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt--atgctaaaaaatttcaagtt 299  Q
    ||||||||||||||| |  | ||  |||||  ||| |||| ||||| |||| | |||||  ||   ||||| ||||||  |||| |||||||||||||||    
T  16027887 tgaaataaatagtaaatcctactccatttatcttttaaagtagtgtgacatcctgttta--gttgattactctgatttttatgc-aaaaaatttcaagtt 16027983  T
Q  300 ggaaaaacggggtgttacaa 319  Q
    ||||||||| ||||||||||    
T  16027984 ggaaaaacgaggtgttacaa 16028003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 37017667 - 37017587
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||| |||||||||||| | ||  ||||| ||||||||||  ||| ||| |||||||| |||||||||||||||||    
T  37017667 aaagaagtgttacattccgtttatgttgaattactttgatttatgcacaaatatt-caagttgggaaaacggggtgttacaa 37017587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 14046782 - 14046742
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  14046782 aaagaagtgtgacattccgtttaaggtgttttactctgatt 14046742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 24049255 - 24049295
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  24049255 aaagaggtgtaacattccgtttaaggtgttttactctgatt 24049295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 319
Target Start/End: Original strand, 4890013 - 4890048
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||||||||||| |||||||||||||||||    
T  4890013 taaaaaatttcaagttgggaaaacggggtgttacaa 4890048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 4829326 - 4829355
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  4829326 tgccaacatgatgttttattaagatatttt 4829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 4832621 - 4832650
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  4832621 tgccaacatgatgttttattaagatatttt 4832650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 4835916 - 4835945
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  4835916 tgccaacatgatgttttattaagatatttt 4835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 14184177 - 14184148
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  14184177 tgccaacatgatgttttattaagatatttt 14184148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 14187716 - 14187687
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  14187716 tgccaacatgatgttttattaagatatttt 14187687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 14971706 - 14971747
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgattt 279  Q
    |||||||||| |||||||||||||| ||||||||| ||||||    
T  14971706 aaagaagtgtgacattccgtttaagttgttttactctgattt 14971747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 19619078 - 19619114
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||| |||||||||||||||| |||||    
T  19619078 aagtgtaacattccatttaaggtgttttactctgatt 19619114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 192; Significance: 1e-104; HSPs: 3)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 55 - 318
Target Start/End: Complemental strand, 6934 - 6673
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6934 ttacgtgatttattatgacttttatgttgaagactatttagattggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 6835  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  6834 agatattttccgctgcattgagatttaatt-tgatattatgaaatgattgaaataattagtaattttgctatatttacgtttgaaagaagtgtagcattc 6736  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| |||||| |  | | || ||||||||||| ||||||||||||||||    
T  6735 cgtttaaggtgttttactctgattt-ttatgagaattttcaagttgggaaaacggggtgttaca 6673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 9842 - 9758
Alignment:
Q  237 gaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |   | ||| ||||||||||| |||||||||||||||||||    
T  9842 gaaagaagtgtagcattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttacaatt 9758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 6855 - 6826
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  6855 tgccaacatgatgttttattaagatatttt 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 182; Significance: 5e-98; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 55 - 272
Target Start/End: Complemental strand, 391305 - 391088
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  391305 ttacgagatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 391206  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  391205 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaataaatagtaattttggtatatttacgtttgaaagaagtgtagcattc 391106  T
Q  255 cgtttaaggtgttttact 272  Q
    ||||||||||||||||||    
T  391105 cgtttaaggtgttttact 391088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 321
Target Start/End: Complemental strand, 31265 - 31048
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgag 197  Q
    |||||| | ||||||||||| ||||||||||| ||||||||||||||||||  | | |  | ||||| |||||| |||||||||||| ||||   |  ||    
T  31265 tggattataattaagttgtttaagttgaggccattgtgccaacatgatgttgaacttaattgttttccgctgcaatgagatttaatt-tgatgacaaaag 31167  T
Q  198 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaag 297  Q
    ||   || |||||||||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | ||||||||| |||||||||| |||||||| ||||    
T  31166 at---tgcaataaatagtaattttactatattcatatttgaaagaattgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caag 31072  T
Q  298 ttggaaaaacggggtgttacaatt 321  Q
    |||| |||||||||||||||||||    
T  31071 ttgggaaaacggggtgttacaatt 31048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 321
Target Start/End: Complemental strand, 36572 - 36355
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgag 197  Q
    |||||| | ||||||||||| ||||||||||| ||||||||||||||||||  | | |  | ||||| |||||| |||||||||||| ||||   |  ||    
T  36572 tggattataattaagttgtttaagttgaggccattgtgccaacatgatgttgaacttaattgttttccgctgcaatgagatttaatt-tgatgacaaaag 36474  T
Q  198 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaag 297  Q
    ||   || |||||||||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | ||||||||| |||||||||| |||||||| ||||    
T  36473 at---tgcaataaatagtaattttactatattcatatttgaaagaattgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caag 36379  T
Q  298 ttggaaaaacggggtgttacaatt 321  Q
    |||| |||||||||||||||||||    
T  36378 ttgggaaaacggggtgttacaatt 36355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 154368 - 154451
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||||| ||||||||||||||||| | ||| ||     ||| ||| | ||||| |||||||||||||||||||    
T  154368 aaagaagtgtaacattctgtttaaggtgttttactctaattaatttatgaaatttttatgttgggaaaacggggtgttacaatt 154451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 442944 - 442910
Alignment:
Q  287 aaaatttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||||||||||| |||||||||||||||||||    
T  442944 aaaatttcaagttgggaaaacggggtgttacaatt 442910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 391226 - 391197
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  391226 tgccaacatgatgttttattaagatatttt 391197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 1e-95; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 101 - 318
Target Start/End: Complemental strand, 21652602 - 21652385
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  21652602 atttttattaagttgtttaagttgaggccatagtgccaacatgatgttttattaagatattttccgctgcattgagatttaattttgatattatgaaatg 21652503  T
Q  201 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21652502 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattccgtttaaggtgttttactctgatttatgctaaaaaaattcaagttg 21652403  T
Q  301 gaaaaacggggtgttaca 318  Q
    | ||||||||||||||||    
T  21652402 ggaaaacggggtgttaca 21652385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 55 - 279
Target Start/End: Original strand, 12359817 - 12360040
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12359817 ttacgtgatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 12359916  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||  |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12359917 agatatttttcgctgcattgaaatttaatt-tgatattatgaaatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattc 12360015  T
Q  255 cgtttaaggtgttttactatgattt 279  Q
    |||||||| ||||||||| ||||||    
T  12360016 cgtttaagatgttttactctgattt 12360040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 76 - 318
Target Start/End: Complemental strand, 22348927 - 22348686
Alignment:
Q  76 ttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattg 174  Q
    |||||||||||| | || |||| |||||||| | | ||||||| |||||||||| |||||||||||| || |||  ||| | || ||||| |||||||||    
T  22348927 ttatgttgaagatttgtctagactggattttaaattagttgtttaagttgaggctgttgtgccaacacgaagttgaatttaaatgttttccgctgcattg 22348828  T
Q  175 agatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactat 274  Q
    |||||||| | ||||   ||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||| ||| | |||| || ||||||||| |    
T  22348827 agatttaaat-tgatgacatgagatgattgaaataaatagtaattttactatatttatattttaaagaagtgtagcatcctgttt-agttgttttactct 22348730  T
Q  275 ga-tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    || ||||||| ||||||||||||||||| || | |||||||||||    
T  22348729 gattttatgc-aaaaaatttcaagttgggaatatggggtgttaca 22348686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 98 - 316
Target Start/End: Complemental strand, 24725857 - 24725644
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgag 197  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||| ||||  ||| | || ||||| ||||||||||||||||||| ||||   |||||    
T  24725857 tggattttaattaagttgtttaagttgaggtcgttgtgccaacatggtgttgaatttaaatgttttccgctgcattgagatttaatt-tgatgacatgag 24725759  T
Q  198 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaag 297  Q
     |||||| |||||||||||| ||| |||||||||  |||||||||||||||||||    ||||  ||  |||||| |||||||||| |||||||||||||    
T  24725758 ttgattg-aataaatagtaactttactatatttatatttgaaagaagtgtaacatcatattta--gttgtttactctgatttatgc-aaaaaatttcaag 24725663  T
Q  298 ttggaaaaacggggtgtta 316  Q
    || |||||| |||||||||    
T  24725662 ttagaaaaatggggtgtta 24725644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 42696277 - 42696104
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| || |||||||| ||||||||||||||||||||||||||||||  ||| | || ||||| |||||||    
T  42696277 ttttatgttgaagatttgtttaaactggattttaat-aagttgtttaagttgaggccgttgtgccaacatgatgttgaatttaaatgttttccgctgcat 42696179  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    |||||||||| | ||||   ||||||||||||||||||||||||||||| |||| ||||   |||||| |||||||    
T  42696178 tgagatttaaat-tgatgacatgagatgattgaaataaatagtaattttactatgtttatacttgaaaaaagtgta 42696104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 24724344 - 24724572
Alignment:
Q  93 tagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatatt 192  Q
    |||| |||||||| | ||||||||| ||||||||| ||||||||||||| ||||||| ||| | || ||||| |||| ||||| |||||| | ||||       
T  24724344 tagactggattttaaataagttgtttaagttgaggtcgttgtgccaacacgatgtttaatttaaatgttttccgctgaattgaaatttaaat-tgatgac 24724442  T
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaat 291  Q
    ||||||||||||||||||||||||||||| |||||||||  | | |||| ||||||  ||   |||||  ||  |||||| ||| ||||||| ||||||     
T  24724443 atgagatgattgaaataaatagtaattttactatatttatatattaaagtagtgtagtatcatgttta--gttgtttactctgattttatgc-aaaaaaa 24724539  T
Q  292 ttcaagttggaaaaacggggtgttacaatttgt 324  Q
    |||||||||| |||||||||||||||| |||||    
T  24724540 ttcaagttgggaaaacggggtgttacattttgt 24724572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 103 - 318
Target Start/End: Complemental strand, 19674917 - 19674701
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt-gagatttaattctgatattatgagatga 201  Q
    ||||| ||||||||| || |||||||| || |||||||| ||||||  ||| | || ||||| |||||||| ||||||||| | ||||   |||||||||    
T  19674917 ttttaataagttgtttaaattgaggccattatgccaacacgatgttgaatttaaatgttttccgctgcatttgagatttaaat-tgatgacatgagatga 19674819  T
Q  202 ttgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttac-tatgatttatgctaaaaaatttcaagttg 300  Q
    ||||||| |||||||| ||| ||||||||   ||||||||||||||| ||| | |||| || |  ||||| | |||||||||| |||||| |||||||||    
T  19674818 ttgaaatgaatagtaactttactatatttgtatttgaaagaagtgtagcatcctgttttagtttgtttacttctgatttatgcaaaaaaaattcaagttg 19674719  T
Q  301 gaaaaacggggtgttaca 318  Q
      ||||||||||||||||    
T  19674718 agaaaacggggtgttaca 19674701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 109 - 248
Target Start/End: Complemental strand, 45753990 - 45753852
Alignment:
Q  109 taagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaat 208  Q
    ||||||| | ||||||||||||||||||||||||||||||  ||| | |||||||| |||||||||||| |||| |   ||   ||||||||||||||||    
T  45753990 taagttgcttaagttgaggccgttgtgccaacatgatgttgaatttaaatattttccgctgcattgagacttaaat-aaatgacatgagatgattgaaat 45753892  T
Q  209 aaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    ||||||||||||| |||| ||||  |||||||||| ||||    
T  45753891 aaatagtaattttactatgtttatatttgaaagaaatgta 45753852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 75 - 319
Target Start/End: Complemental strand, 1641865 - 1641623
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| || |||||||| ||||| | ||||||||||||  | ||| ||  ||| |  | ||||| ||||||||    
T  1641865 tttatgttgaagatttgtctagactggattttaat-aagttgtttaagttaatgccgttgtgccattacgatattaaatttaattgttttccgctgcatt 1641767  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    || |||||| | ||||   || |||||| ||||||||||||||| ||| |||||||||  ||| ||||||||||| |||   ||||| | ||||||||||    
T  1641766 gatatttaaat-tgatgacataagatgactgaaataaatagtaactttactatatttatattttaaagaagtgtagcatcttgttta-gttgttttacta 1641669  T
Q  274 tgattt-atgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||    
T  1641668 tgattttatgc-aaaaaatttcaaattggaaaaacggggtgttacaa 1641623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 317
Target Start/End: Original strand, 38888996 - 38889115
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  38888996 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgtttgagttgttttactctgatttatgc-aaaaaaattcaa 38889094  T
Q  297 gttggaaaaacggggtgttac 317  Q
    ||||  |||||||||||||||    
T  38889095 gttgcgaaaacggggtgttac 38889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 51475359 - 51475216
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| |||||| || ||||||| ||||||||||||||| || |||  ||| | || ||||| ||||||||||||||||| | ||||   |||||||||||    
T  51475359 tttaataagttatttaagttgaagccgttgtgccaacacgaagttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgatt 51475261  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    |||||| ||||||||||| |||||||||  ||| |||||||||||    
T  51475260 gaaatatatagtaattttactatatttatattttaaagaagtgta 51475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 8277942 - 8278061
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| ||| |||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| |||| |||||||    
T  8277942 gatgattgagataattaggaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaagatttcaa 8278039  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  8278040 gttgggaaaacggggtgttaca 8278061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 48300041 - 48299922
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||||| |||||| |||||    
T  48300041 gatgattgagataattagtaattttactatattcagctttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaattcaa 48299944  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    || || ||||| ||||||||||    
T  48299943 gtggggaaaacagggtgttaca 48299922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 4597922 - 4598043
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgcta-aaaaatttca 295  Q
    ||||||||| |||| |||||||||| ||||||| |  |||||||||| |||| ||| | ||||| | ||||||||| |||||||||| | |||||  |||    
T  4597922 gatgattgagataattagtaattttactatattcagatttgaaagaaatgtagcatcctgttta-gttgttttactctgatttatgcaacaaaaaaatca 4598020  T
Q  296 agttggaaaaacggggtgttaca 318  Q
    |||||| ||||||||||||||||    
T  4598021 agttgggaaaacggggtgttaca 4598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 16370229 - 16370189
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  16370229 aaagaagtgtaacattccgtttaaggtgttttactctgatt 16370189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 21341428 - 21341388
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  21341428 aaagaagtgtaacattccgtttaaggtgttttactctgatt 21341388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 29533279 - 29533239
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29533279 aaagaagtgtaacattccgtttaaggtgttttactctgatt 29533239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 320
Target Start/End: Original strand, 16060238 - 16060360
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||||||| | ||||   ||  |||||| |||| || | | |||  ||||||    
T  16060238 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtaacatccagtttttagttgtttactctgatataag-tgaaatttttcaa 16060336  T
Q  297 gttggaaaaacggggtgttacaat 320  Q
    ||||| ||||||||||||||||||    
T  16060337 gttgggaaaacggggtgttacaat 16060360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 42911000 - 42910947
Alignment:
Q  264 tgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  42911000 tgttttactctgatttatgc-aaaaaatttcaagttgggaaaatggggtgttaca 42910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 44890700 - 44890666
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  44890700 taaaaaatttcaagttggaaaaacggggtgttaca 44890666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 21172485 - 21172410
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgtta 316  Q
    |||||||||| ||| | ||||| | |||||||||||||||||||  ||||||||||||||||| ||||| ||||||||    
T  21172485 aagaagtgtagcatcctgttta-gttgttttactatgatttatgg-aaaaaatttcaagttgggaaaacagggtgtta 21172410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 32648359 - 32648278
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||     ||| ||| | ||||| |||||||||||||||||    
T  32648359 aaagaagtgtaacattccgtttaagttgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaa 32648278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 13301163 - 13301131
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgtta 316  Q
    |||||||||||||||||||||||||||||||||    
T  13301163 taaaaaatttcaagttggaaaaacggggtgtta 13301131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 12359896 - 12359926
Alignment:
Q  17 tgccaacatgatgttttattaagatattttt 47  Q
    |||||||||||||||||||||||||||||||    
T  12359896 tgccaacatgatgttttattaagatattttt 12359926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 17904995 - 17905029
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  17904995 taaaaaatttcaagttgggaaaacggggtgttaca 17905029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 21652569 - 21652540
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  21652569 tgccaacatgatgttttattaagatatttt 21652540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 49999404 - 49999323
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    ||||||||| |||| ||||||||||||||||||| |||||| |   | ||| ||| |  |||| ||||||||||||||||||    
T  49999404 aagaagtgtgacataccgtttaaggtgttttactctgatttttatgagaaatttttatattgggaaaacggggtgttacaat 49999323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 12711747 - 12711691
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 262  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  12711747 aataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 12711691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 31611587 - 31611551
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  31611587 aagtgtaacattccgtttaaggtgtttcactctgatt 31611551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 176; Significance: 2e-94; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 55 - 290
Target Start/End: Complemental strand, 47453 - 47219
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47453 ttacgtgatttattataacttttatgttgaagactgtttaaactggatttttattaagttgtttaagttgaggccgttgtgccaacatgatgttttatta 47354  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||||||||||| | |||    
T  47353 agatattttccgctgcattgagatttaattttgatattatgaaatgattgaaat-aatagtaaaattgctatatttatgtttgaaagaagtgtagctttc 47255  T
Q  255 cgtttaaggtgttttactatgatttatgctaaaaaa 290  Q
    |||||||||||||||||| || ||||||||||||||    
T  47254 cgtttaaggtgttttactctgttttatgctaaaaaa 47219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 47374 - 47345
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  47374 tgccaacatgatgttttattaagatatttt 47345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 174; Significance: 3e-93; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 101 - 318
Target Start/End: Complemental strand, 8730 - 8513
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  8730 atttttattaagttgtttaagttgagaccgttgtgccaacatgatgttttattaagatattttccgctgcattgagatttaattttgatattatgaaatg 8631  T
Q  201 attgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttg 300  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  8630 attgtaataaatagtaattttgctatatttacgtttgaaagaagtgtagcattctgtttaaggtgttttactctgatttatgctaaaaaatttcaagctg 8531  T
Q  301 gaaaaacggggtgttaca 318  Q
    | ||||||||||||||||    
T  8530 ggaaaacggggtgttaca 8513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 8697 - 8668
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  8697 tgccaacatgatgttttattaagatatttt 8668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 149; Significance: 2e-78; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 55 - 278
Target Start/End: Original strand, 42006 - 42229
Alignment:
Q  55 ttacgtgatttattataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttatta 154  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  42006 ttacgtaatttattatgacttttatgttgaagactgtttagactggatttttattaagttgtttaaattgaggccgttgtgccaacatgatgttttatta 42105  T
Q  155 agatattttctgctgcattgagatttaattctgatattatgagatgattg-aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacatt 253  Q
    |||||||||| ||||||||||||||||||| || |||||||| | ||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  42106 agatattttccgctgcattgagatttaatt-tggtattatgaaacgattgaaaatgaatagtaattttactatatttacgtttgaaagaagtgtagcatt 42204  T
Q  254 ccgtttaaggtgttttactatgatt 278  Q
    |||||||||||  |||||| |||||    
T  42205 ccgtttaaggtcctttactctgatt 42229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 19474 - 19434
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  19474 aaagaagtgtaacattccttttaaggtgttttactctgatt 19434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 42085 - 42114
Alignment:
Q  17 tgccaacatgatgttttattaagatatttt 46  Q
    ||||||||||||||||||||||||||||||    
T  42085 tgccaacatgatgttttattaagatatttt 42114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 67 - 318
Target Start/End: Complemental strand, 145118 - 144869
Alignment:
Q  67 ttataacttttatgttgaagactgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctg 166  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||      
T  145118 ttatgacttttatgttgaagactgtttagactgaatttttattaagttgtttaagttgcggccgttgtgccaacatgatgttttattaagataatttcca 145019  T
Q  167 ctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgt 266  Q
    |||||||||||||||||| ||||   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| ||| | |||| || |||    
T  145018 ctgcattgagatttaatt-tgatgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcctgttt-agttgt 144921  T
Q  267 tttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  144920 tttactctgatttatgcataaaaatttcaagttgggaaaacggggtgttaca 144869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 108894 - 108854
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  108894 aaagaagtgtaacattccgtttaaggtgttttactctgatt 108854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 74 - 318
Target Start/End: Complemental strand, 94829 - 94587
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatatttt-ctgctgca 171  Q
    |||||||||||||| | || |||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||| ||| | || |||| | ||||||    
T  94829 ttttatgttgaagatttgtctagactggattttaat-aagttgtttaagttgaggccgttgtgccaacacgatgtttaatttaaatgtttttccgctgca 94731  T
Q  172 ttgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttac 271  Q
    ||||||||||| | ||||   ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| || || |||||    
T  94730 ttgagatttaaat-tgatgacatgagatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttttagttg-tttac 94633  T
Q  272 tatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    | |||||||||| |||||||||||| |||| ||||||||||||||||    
T  94632 tctgatttatgc-aaaaaatttcaatttgggaaaacggggtgttaca 94587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 103 - 321
Target Start/End: Complemental strand, 7528 - 7313
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| |||||||| ||||||| ||||||||| |||  ||| | || ||||| ||||||||||||||||| | ||||  |||||||||||    
T  7528 ttttaataagttgtttaagttgagaccgttgtaccaacatgacgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgatatgagatgat 7430  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||| || || |||||| |||||||||| |||||| |||||||||||    
T  7429 tgaaataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttttagttg-tttactctgatttatgc-aaaaaaattcaagttgga 7332  T
Q  303 aaaacggggtgttacaatt 321  Q
    |||||| ||||||||||||    
T  7331 aaaacgaggtgttacaatt 7313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 319
Target Start/End: Original strand, 10544 - 10770
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| |||||||| |||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  10544 tgtttaaactggattttaattaagttgtttaagttgag-ccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 10641  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || ||||||||| |||||||||| ||||    
T  10642 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcatgttt-agttgttttactctgatttatgc-aaaa 10739  T
Q  289 aatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||| |||||||||||||||||    
T  10740 aatttcaagttgggaaaacggggtgttacaa 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 10152 - 10379
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||||||||||||||| ||||||||||  ||||||||||||||||||  | | || | ||||| ||| || |||||||||||| |||    
T  10152 tgtttaaactggatttttattaagttgtttaagttgaggctattgtgccaacatgatgttgaacttagttgttttccgctacaatgagatttaatt-tga 10250  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| ||||||| |  ||||||| ||||||| ||| | ||||| | ||||||||| |||||||||| ||||    
T  10251 tgacatatgatgattgaaataaatagtaattttactatattcatatttgaaaaaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaa 10349  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    || |||||||||| ||||||||||||||||    
T  10350 aaattcaagttgggaaaacggggtgttaca 10379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 89 - 299
Target Start/End: Original strand, 69337 - 69545
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  69337 tgtttaaactggattttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 69435  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| || ||||||||| |||||||| | ||||    
T  69436 tgacatatgatgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatacaaaaa 69534  T
Q  289 aatttcaagtt 299  Q
    || ||||||||    
T  69535 aaattcaagtt 69545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 83; Significance: 6e-39; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 103 - 321
Target Start/End: Complemental strand, 27809 - 27593
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||||||||||||| ||| | ||||||| ||||||||| ||||||| ||| | |||||||| ||||||||||||||||||| ||||   ||||||||||    
T  27809 ttttattaagttgtttaagctaaggccgtcgtgccaacacgatgtttaatttaaatattttccgctgcattgagatttaatt-tgatgacatgagatgat 27711  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||  || |||| |||||||||  |||||| |||||||| ||| |  |||   ||  |||||| |||||||||| |||||||||||||||||     
T  27710 tgaaataaatcatatttttactatatttatatttgaaggaagtgtagcatcctatttttagttgtttactctgatttatgc-aaaaaatttcaagttggg 27612  T
Q  303 aaaacggggtgttacaatt 321  Q
    |||||||||||||||||||    
T  27611 aaaacggggtgttacaatt 27593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 48247 - 48420
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| | ||||||||| |||||||||||||||||||||||||| |||  ||| | || ||||||||||||||    
T  48247 tttatgttgaagatttgtctagactggattttaaataagttgtttaagttgaggccgttgtgccaacatgaagttgaatttaaatgttttctgctgcatt 48346  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    ||||||||| | ||||   ||||||||||||||||| ||||||||||| |||||||||  |||||||||| ||||    
T  48347 gagatttaaat-tgatgacatgagatgattgaaatatatagtaattttactatatttatatttgaaagaattgta 48420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 75 - 318
Target Start/End: Complemental strand, 17571 - 17333
Alignment:
Q  75 tttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt 173  Q
    ||||||||||||| | || |||| |||||||| || |||| ||| ||||||||||||||||||||  | | ||||| |||||  | ||||| ||||||||    
T  17571 tttatgttgaagatttgtctagactggattttaat-aagtcgtttaagttgaggccgttgtgccattacgttgtttaattaa--tgttttccgctgcatt 17475  T
Q  174 gagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttacta 273  Q
    ||||||||| | ||||   ||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| | |||| || || ||||||     
T  17474 gagatttaaat-tgatgacatgagttgattgaaataaatagtaattttactatatttatatttgaaagaagtgtagcatcctgttttagttg-tttactc 17377  T
Q  274 tgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  17376 tgatttatgc-aaaaaatttcaagttggaaaaacggggtattaca 17333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 4072 - 4297
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||  | | |  | ||||| |||||| |||||||||||| |||    
T  4072 tgtttaaattggattttaattaagttgtttaagttgaggccgttgtgccaacatgatgttgaacttaattgttttccgctgcaatgagatttaatt-tga 4170  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    ||  ||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || ||||||||| |||||||||| ||||    
T  4171 taacatatgatgattgaaataaatagtaattttactatattcatatttgaaagaagtgtatcatcttgttt-agttgttttactctgatttatgc-aaaa 4268  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    || |||||||| | ||||| ||||||||||    
T  4269 aaattcaagtttg-aaaacagggtgttaca 4297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 127 - 318
Target Start/End: Complemental strand, 59813 - 59625
Alignment:
Q  127 gccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaattttgctat 226  Q
    ||||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||| ||||||||||||||| ||| ||||    
T  59813 gccgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgaatgaaataaatagtaactttactat 59715  T
Q  227 atttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||  ||||||||||||||| ||| | |||| | ||  |||||| ||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  59714 atttatatttgaaagaagtgtagcatcctgtttta-gttatttactctgatttatg-taaaaaaattcaagttgaaaaaacagggtgttaca 59625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 89 - 318
Target Start/End: Original strand, 79129 - 79355
Alignment:
Q  89 tgtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctga 188  Q
    |||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||  | | || | ||||| |||||| |||||||||||| |||    
T  79129 tgtttaaattggattttaattaagttgtttaagctgaggtcgttgtgccaacatgatgttgaacttagttgttttccgctgcaatgagatttaatt-tga 79227  T
Q  189 tattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaa 288  Q
    |   ||  ||| ||||||||||||||||||||| ||||||| |  ||||||||||||||| |||   |||| || ||||||||| |||||||||| ||||    
T  79228 tgacatatgataattgaaataaatagtaattttactatattcatatttgaaagaagtgtagcatcttgttt-agttgttttactctgatttatgc-aaaa 79325  T
Q  289 aatttcaagttggaaaaacggggtgttaca 318  Q
    || |||||||||| ||||||||||||||||    
T  79326 aaattcaagttgggaaaacggggtgttaca 79355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 119 - 320
Target Start/End: Complemental strand, 5167 - 4969
Alignment:
Q  119 aagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgattgaaataaatagtaat 218  Q
    ||||||||||||||||||||||||||||||  | | || | ||||| ||||||||||||||||||| ||||    |||||| ||||||||||||| ||||    
T  5167 aagttgaggccgttgtgccaacatgatgttgaacttagttgttttccgctgcattgagatttaatt-tgatgacttgagattattgaaataaataataat 5069  T
Q  219 tttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    | | |||| |||   ||||||||||||||| ||| | |||| || ||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  5068 tctactatgtttttatttgaaagaagtgtagcatcctgttttagttgttt-actctgatttatgc-aaaaaatttcaagttgggaaaacggggtgttaca 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 98 - 321
Target Start/End: Complemental strand, 1529 - 1308
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatatttt-ctgctgcattgagatttaattctgatattatga 196  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| ||||||  | | || | |||| | |||||| |||| ||||||| ||||   ||      
T  1529 tggattttaattaagttgtttaagttgaggccgttgtgccaacacgatgttgaacttagttgtttttccgctgcaatgaggtttaatt-tgatgacatat 1431  T
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||| ||||||||||||||||| ||||||||| | ||| |||||||| | ||||| |||| || ||||||||| |||| ||||| ||||||||||||    
T  1430 gatgatttaaataaatagtaattttactatatttatgattgtaagaagtgcagcattctgttt-agttgttttactctgatctatgc-aaaaaatttcaa 1333  T
Q  297 gttggaaaaacggggtgttacaatt 321  Q
    ||||| ||||| |||||||||||||    
T  1332 gttgggaaaactgggtgttacaatt 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 103 - 321
Target Start/End: Complemental strand, 16965 - 16750
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||  ||| | || ||||| ||||||||||||||||| | ||||   ||||||||||    
T  16965 ttttaataagttgttaaagttgaggccgttgtgccaacacgatgttgaatttaaatgttttccgctgcattgagatttaaat-tgatgacatgagatgat 16867  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||| ||| |||||  |   || |||||||||||| ||| | |||| || || |||||| | |||||||| |||||| ||||||||||     
T  16866 tgaaataaatagtaactttactataaatgtattcgaaagaagtgtagcatcctgttttagttg-tttactctaatttatgc-aaaaaaattcaagttggg 16769  T
Q  303 aaaacggggtgttacaatt 321  Q
    |||||| ||||||||||||    
T  16768 aaaacgaggtgttacaatt 16750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 318
Target Start/End: Original strand, 330296 - 330509
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt-gagatttaattctgatattatgagatga 201  Q
    ||||| ||||||||| || |||||||| ||||||||||| ||||||  ||| | || ||||| |||||||| ||||||||| | ||||   |||||||||    
T  330296 ttttaataagttgtttaaattgaggccattgtgccaacacgatgttgaatttaaatgttttccgctgcatttgagatttaaat-tgatgacatgagatga 330394  T
Q  202 ttgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgg 301  Q
    ||||||| |||||||| ||| ||||||||   |||||||||||||||  || | |||| || | ||||||| |||||||||| |||||| ||||||||||    
T  330395 ttgaaatgaatagtaactttactatatttgtatttgaaagaagtgtagaatcctgttt-agttattttactctgatttatgc-aaaaaaattcaagttgg 330492  T
Q  302 aaaaacggggtgttaca 318  Q
     ||||||||||||||||    
T  330493 gaaaacggggtgttaca 330509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 73870 - 73813
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaag 262  Q
    ||||||||||||||||| || ||||||  ||| |||||||||| |||||| |||||||    
T  73870 aaataaatagtaattttactctatttatcttttaaagaagtgtgacattctgtttaag 73813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 74 - 319
Target Start/End: Complemental strand, 2898 - 2656
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| || |||||||| |||||||||| ||| |||||| | || |||  ||| | |  ||||| |||||||    
T  2898 ttttatgttgaagatttgtttaaactggattttaat-aagttgtttaagttgaggcggttatgccaatacgaagttgaatttaaaagttttccgctgcat 2800  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    ||| |||||||| ||||   ||||||||||||||||||||||||| ||| |||||| |   ||||||||||||||| ||| |  ||| || || ||||||    
T  2799 tgaaatttaatt-tgatgacatgagatgattgaaataaatagtaactttactatatgtgtatttgaaagaagtgtagcatcctattttagttg-tttact 2702  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
     ||||||||| ||||||| |||||||||| |||||||||||||||||    
T  2701 ttgatttatg-taaaaaaattcaagttgggaaaacggggtgttacaa 2656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 74 - 321
Target Start/End: Complemental strand, 4424 - 4185
Alignment:
Q  74 ttttatgttgaagact-gtttagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcat 172  Q
    |||||||||||||| | ||||| | |||||||| || |||||||| ||||||||| ||||||||||||| ||||||  ||| | || ||||| |||||||    
T  4424 ttttatgttgaagaattgtttaaactggattttaat-aagttgtttaagttgaggtcgttgtgccaacacgatgttgaatttaaatgttttccgctgcat 4326  T
Q  173 tgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttact 272  Q
    |||||||||| | ||||   ||||| |||||| |||||||||||| ||| |||||||||  |||||   ||||||| ||| | |||||  ||  ||||||    
T  4325 tgagatttaaat-tgatgacatgagttgattg-aataaatagtaactttactatatttatatttga---aagtgtagcatcctgttta--gttgtttact 4233  T
Q  273 atgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaatt 321  Q
     |||||||||| |||||| |||||||||| |||||| ||||||||||||    
T  4232 ctgatttatgc-aaaaaaattcaagttgggaaaacgaggtgttacaatt 4185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 74 - 290
Target Start/End: Complemental strand, 397052 - 396838
Alignment:
Q  74 ttttatgttgaagact-gtttagattggattttta-ttaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgca 171  Q
    |||||||||||||| | ||||| | |||||||||| |||||||||| ||||| ||||| ||||||||||| ||||||  ||| | || ||||| | ||||    
T  397052 ttttatgttgaagatttgtttaaactggatttttaattaagttgtttaagtttaggccattgtgccaacacgatgttgaatttaaatgttttccgatgca 396953  T
Q  172 ttgagatttaattctgatattatgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttac 271  Q
    ||||||||||| | ||||   |||||||||||| |||||||||||| ||| |||||||||  ||||||||||||||| ||| | |||||  ||  |||||    
T  396952 ttgagatttaaat-tgatgacatgagatgattg-aataaatagtaactttactatatttatatttgaaagaagtgtagcatcctgttta--gttgtttac 396857  T
Q  272 tatgatttatgctaaaaaa 290  Q
    | |||||||||| ||||||    
T  396856 tctgatttatgcaaaaaaa 396838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 128294 - 128335
Alignment:
Q  277 tttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||| ||||||| |||||||||| |||||||||||||||    
T  128294 tttatgcaaaaaaatatcaagttggataaacggggtgttaca 128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 9879 - 9998
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| ||||||||||||    
T  9879 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgc-aaaaaatttcaa 9976  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  9977 gttgggaaaacggggtgttaca 9998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 57662 - 57582
Alignment:
Q  237 gaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||    
T  57662 gaaagaagtgtagcattccgtttaaggtgttttactctgatttattc-aaaaaatttcaagttgggaaaacggggtgttaca 57582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 98 - 301
Target Start/End: Original strand, 978 - 1178
Alignment:
Q  98 tggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgag 197  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||||||  | | |  | |||||| ||||| | ||||||||| |||||    |  |    
T  978 tggatttttaataagttgtttaagttgagaccgttgtgccaacatgatgttgaacttaattgttttctactgcaataagatttaat-ctgatgacttatg 1076  T
Q  198 atgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaag 297  Q
    |||||||||||||||||||||||| |||||||    |||| |||||||||| ||| | |||| || ||||||||| |||||||||| ||||| |||||||    
T  1077 atgattgaaataaatagtaattttactatattcctatttgtaagaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaagtttcaag 1174  T
Q  298 ttgg 301  Q
    ||||    
T  1175 ttgg 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 104 - 321
Target Start/End: Complemental strand, 745 - 535
Alignment:
Q  104 tttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgatt 203  Q
    |||| |||||| || ||||||||||||||||||||  | ||| ||  |||||  | | ||| ||||||||||||||||| | ||||   ||||| |||||    
T  745 tttaataagttatttaagttgaggccgttgtgccattacgatattaaattaa--tgtgttccgctgcattgagatttaaat-tgatgacatgagttgatt 649  T
Q  204 gaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaa 303  Q
    ||| |||||||||| ||| |||||||||  ||||||||||||||| ||||| |||||  ||  |||||| |||||||||| |||||| |||||||||| |    
T  648 gaa-taaatagtaactttactatatttatatttgaaagaagtgtagcattctgttta--gttgtttactctgatttatgc-aaaaaaattcaagttggga 553  T
Q  304 aaacggggtgttacaatt 321  Q
    |||| |||||||||||||    
T  552 aaacagggtgttacaatt 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 18591 - 18673
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggt-gttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||     ||||||| | ||||| |||||||||||||||||    
T  18591 aaagaagtgtaacattccgtttaaggtggttttactctgattaatttatgaaaattttatgttgggaaaacggggtgttacaa 18673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 127941 - 128125
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||| ||||||||| ||||||||||||||||||||  | ||||||| | | | || ||||  ||||||||||||||||| | ||||   |||| |||||    
T  127941 ttttaataagttgtttaagttgaggccgttgtgccattacgatgtttaaattaaatgtttttcgctgcattgagatttaagt-tgatgacatgaaatgat 128039  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaa 289  Q
    ||||||||||||||| ||| || ||||||  ||||||||||||||| ||| | |||| || || |||||| |||||||||| |||||    
T  128040 tgaaataaatagtaactttactgtatttatatttgaaagaagtgtagcatcctgttttagttg-tttactctgatttatgcaaaaaa 128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 103 - 318
Target Start/End: Original strand, 171304 - 171517
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcatt-gagatttaattctgatattatgagatga 201  Q
    ||||| ||||||||| || |||||||| |||||||||||| |||||  ||| | || ||||| |||| ||| ||||||||| | ||||   |||||||||    
T  171304 ttttaataagttgtttaatttgaggccattgtgccaacataatgttgaatttaaatgttttccgctgtatttgagatttaaat-tgatgacatgagatga 171402  T
Q  202 ttgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttgg 301  Q
    ||||||| |||||||| ||| ||||||||   |||||| |||||||| ||| | |||| || ||||||||| |||||||||| ||||||  |||||||||    
T  171403 ttgaaatgaatagtaactttactatatttgtatttgaacgaagtgtagcatcctgttt-agttgttttactctgatttatgc-aaaaaaaatcaagttgg 171500  T
Q  302 aaaaacggggtgttaca 318  Q
     ||||| | ||||||||    
T  171501 gaaaacagtgtgttaca 171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 12268 - 12387
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| |||   |||||   ||||||||| |||||||||| ||||||||||||    
T  12268 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcatgtttatt-tgttttactctgatttatgc-aaaaaatttcaa 12365  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    |||||||||||||| |||||||    
T  12366 gttggaaaaacgggatgttaca 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 13918 - 13884
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  13918 taaaaaatttcaagttgggaaaacggggtgttaca 13884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 8684 - 8565
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||| ||||| ||| | ||||| | ||||||||| |||||||||| |||||||| |||    
T  8684 gatgattgagataattagtaattttactatattcagatttgaaagaggtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caa 8587  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  8586 gttgggaaaacggggtgttaca 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 14073 - 13954
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||| ||||| ||| | ||||| | ||||||||| |||||||||| |||||||| |||    
T  14073 gatgattgagataattagtaattttactatattcagatttgaaagaggtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caa 13976  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| ||||||||||||||||    
T  13975 gttgggaaaacggggtgttaca 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 11245 - 11364
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||| ||||||| ||| | |||| || || |||||| |||||||||| |||||| |||||    
T  11245 gatgattgaaataaatagtaactttactatatttatatttgaaaaaagtgtagcatcctgttttagttg-tttactctgatttatgc-aaaaaaattcaa 11342  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    ||||| |||||||| |||||||    
T  11343 gttgggaaaacgggatgttaca 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 35765 - 35881
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |   |||||||||||||| ||| | ||||| | ||||||||| |||||||||| |||||| |||||    
T  35765 gatgattgagataattagtaattttactatattcaaaattgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaattcaa 35863  T
Q  297 gttggaaaaacggggtgt 314  Q
    ||||| ||||||||||||    
T  35864 gttgggaaaacggggtgt 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 141657 - 141537
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| |||||| |||||    
T  141657 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaaattcaa 141559  T
Q  297 gttggaaaaacggggtgttaca 318  Q
    || |  ||||||||||||||||    
T  141558 gtagcgaaaacggggtgttaca 141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 1776 - 1880
Alignment:
Q  212 tagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacgggg 311  Q
    |||||||||| ||||||| |  ||||||||||||||| ||| | ||||| | ||||||||| |||||||||| |||||||| |||||||| |||||||||    
T  1776 tagtaattttactatattcatatttgaaagaagtgtagcatcctgttta-gttgttttactctgatttatgcaaaaaaatt-caagttgggaaaacgggg 1873  T
Q  312 tgttaca 318  Q
    |||||||    
T  1874 tgttaca 1880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 1519 - 1630
Alignment:
Q  101 atttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatg 200  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||||||  | | |  | ||||| |||||| |||||||||||| ||||   ||  ||||    
T  1519 atttttaataagttgtttaagttgaggccgttgtgccaacaggatgttgaacttaattgttttccgctgcaatgagatttaatt-tgatgacatatgatg 1617  T
Q  201 attgaaataaata 213  Q
    |||||||||||||    
T  1618 attgaaataaata 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 105200 - 105323
Alignment:
Q  197 gatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaa 296  Q
    ||||||||| |||| |||||||||| ||||||| |  ||||||||||||||| ||| | |||| || ||||||||| |||||||| | |||| |  | ||    
T  105200 gatgattgagataattagtaattttactatattcagatttgaaagaagtgtagcatcctgttt-agttgttttactctgatttatccaaaaataaattaa 105298  T
Q  297 gttggaaaaacggggtgttacaatt 321  Q
    ||||| |||||||||||||||||||    
T  105299 gttgggaaaacggggtgttacaatt 105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1580 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1580
Description:

Target: scaffold1580; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 191 - 270
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||| ||| ||||||||||||||||||| |||||| |   ||||| ||||||||||| ||||||||||||||||    
T  191 aagaagtgtagcatcccgtttaaggtgttttactctgatttttatgaaaaattttcaagttgggaaaacggggtgttaca 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 22438 - 22359
Alignment:
Q  239 aagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||||||||||||||||| |||||| |   | ||| ||||||||||| ||||||||||||||||    
T  22438 aagaagtgtgacattccgtttaaggtgttttactctgatttttatgagaaattttcaagttgggaaaacggggtgttaca 22359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 318
Target Start/End: Original strand, 3475 - 3694
Alignment:
Q  93 tagattggatttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatatt 192  Q
    ||||||||||||| || |||||||  | |||||||||||||||| |  | ||||||  |||||  | ||||| ||||||||||||||| | | |||||      
T  3475 tagattggattttaat-aagttgtctatgttgaggccgttgtgcgattacgatgttaaattaa--tgttttccgctgcattgagatttgaat-tgataac 3570  T
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatga-tttatgctaaaaaat 291  Q
    |||||||| ||||||||||||||||||   |||||||||  ||| ||||| ||||| ||||| |||||  ||  |||||| ||| ||||||| |||||||    
T  3571 atgagatgtttgaaataaatagtaattcaactatatttatattttaaagatgtgtagcattctgttta--gttatttactctgattttatgcaaaaaaat 3668  T
Q  292 ttcaagttggaaaaacggggtgttaca 318  Q
    || |||||| ||||||| | |||||||    
T  3669 tt-aagttgaaaaaacgagatgttaca 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 188773 - 188885
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||||| || ||||||  ||| |||||||||| |||| | ||||||| || || ||| |||||  |||| |||||||||||||||||| |    
T  188773 aataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttggga 188870  T
Q  304 aaacggggtgttaca 318  Q
    |||||||||||||||    
T  188871 aaacggggtgttaca 188885  T

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Target: scaffold1256 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 1221 - 1336
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgat--ttatgctaaaaaatttcaagttggaa 303  Q
    |||||||| ||||||| |||||||||  ||| |||| ||||| |||| | |||| || ||||| ||| ||||  |||||| ||||||||||||||||| |    
T  1221 aataaataataattttactatatttatcttttaaagtagtgtgacatcctgttttagttgttt-actctgatgtttatgc-aaaaaatttcaagttggga 1318  T
Q  304 aaacggggtgttacaatt 321  Q
    ||||||||||||||||||    
T  1319 aaacggggtgttacaatt 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 8012 - 8065
Alignment:
Q  264 tgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  8012 tgttttactctgatttatgc-aaaaaatttcaagttgggaaaacggggtgttaca 8065  T

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Target: scaffold0039 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 21802 - 21855
Alignment:
Q  264 tgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  21802 tgttttactctgatttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 21855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 2215 - 2175
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  2215 aaagaagtgtaacattccgtttaaggtgttttactctgatt 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 11611 - 11651
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  11611 aaagaagtgtaacattccgtttaaggtgttttactctgatt 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 27760 - 27720
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27760 aaagaagtgtaacattccgtttaaggtgttttactctgatt 27720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 66180 - 66220
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  66180 aaagaagtgtaacattccgtttaaggtgttttactctgatt 66220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 321
Target Start/End: Original strand, 114154 - 114366
Alignment:
Q  103 ttttattaagttgttgaagttgaggccgttgtgccaacatgatgttttattaagatattttctgctgcattgagatttaattctgatattatgagatgat 202  Q
    ||||||||||||||| | ||||||| | ||||||||  | | ||||| |||||  | |||||  ||||| |||||||||| | ||||   |||||||| |    
T  114154 ttttattaagttgtttatgttgaggtcattgtgccattacgttgtttaattaa--tgttttccactgcaatgagatttaaat-tgatgacatgagatgtt 114250  T
Q  203 tgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgattt-atgctaaaaaatttcaagttgg 301  Q
    ||||||||||||||||||| || ||||||  ||| |  | |||||| ||| | |||||  ||   ||||| |||||| |||| |||||||||||||||||    
T  114251 tgaaataaatagtaattttactttatttatatttcac-gtagtgtagcatcctgttta--gttgattactctgattttatgc-aaaaaatttcaagttgg 114346  T
Q  302 aaaaacggggtgttacaatt 321  Q
     |||||||||||||||||||    
T  114347 gaaaacggggtgttacaatt 114366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 138667 - 138707
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  138667 aaagaagtgtaacattccgtttaaggtgttttactctgatt 138707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 25033 - 24951
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||     ||| ||| | ||||| ||||||||||||||||||    
T  25033 aaagaagtgtaacaatccgtttaaggtgttttactctgattaatttatgaaatttttatgttgggaaaacggggtgttacaat 24951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 193 - 319
Target Start/End: Complemental strand, 6669 - 6547
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatt 292  Q
    ||||| |||||||| ||| || ||| ||| |||||||||  ||||||||||||||| ||||| |||||  ||  |||||| | |||||||| |||||| |    
T  6669 atgagttgattgaa-taattaataactttactatatttatatttgaaagaagtgtatcattctgttta--gttgtttactctaatttatgcaaaaaaaat 6573  T
Q  293 tcaagttggaaaaacggggtgttacaa 319  Q
     |||||||| |||||||||||||||||    
T  6572 -caagttgggaaaacggggtgttacaa 6547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 6469 - 6354
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgat--ttatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||||| ||  |||||  ||| |||| ||||| |||| | |||| || ||||| | ||||||  |||||| |||||||| ||||||||||    
T  6469 aataaatagtaattttactcaatttatcttttaaagtagtgtgacatcctgttttagttgtttaa-tatgatgtttatgcaaaaaaatt-caagttggaa 6372  T
Q  304 aaacggggtgttacaatt 321  Q
    ||||| ||||||||||||    
T  6371 aaacgaggtgttacaatt 6354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 168574 - 168528
Alignment:
Q  202 ttgaaataaatagtaattttgctatatttacgtttgaaagaagtgta 248  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||    
T  168574 ttgaaataaatattaattttactatatttacatttgaaagaagtgta 168528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 4599 - 4562
Alignment:
Q  241 gaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||||||||||||||||| |||||    
T  4599 gaagtgtaacattccgtttaaggtgttttactctgatt 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 3658 - 3618
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  3658 aaagaagtgtaatattccgtttaaggtgttttactctgatt 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 3578 - 3618
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  3578 aaagaagtgtaacattccgtttaaagtgttttactctgatt 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18849 - 18889
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  18849 aaagaagtgtaacatttcgtttaaggtgttttactctgatt 18889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 857 - 821
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||| |||||    
T  857 aagtgtaacattccgtttaaggtgttttactctgatt 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 5177 - 5141
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5177 aagtgtaacattccgtttaaggtgttttactctgatt 5141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 893 - 857
Alignment:
Q  242 aagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||||||||||||||||| |||||    
T  893 aagtgtaacattccgtttaaggtgttttactctgatt 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 66559 - 66519
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  66559 aaagatgtgtaacattccgtttaaggtgttttactctgatt 66519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 60955 - 60842
Alignment:
Q  205 aaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttgga 302  Q
    ||||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| || || ||| |||||  |||| ||||||||||||| |||||    
T  60955 aaataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaatttgga 60858  T
Q  303 aaaacggggtgttaca 318  Q
    ||||||||||||||||    
T  60857 aaaacggggtgttaca 60842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 72444 - 72410
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  72444 taaaaaatttcaagttgggaaaacggggtgttaca 72410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 14833 - 14873
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  14833 aaagaagtgtaacattctgtttaaggtgttttactctgatt 14873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 224929 - 224969
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatt 278  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  224929 aaagaggtgtaacattccgtttaaggtgttttactctgatt 224969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 1421 - 1456
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||| |||||||||||||||||||||||||||||    
T  1421 aaaaaaattcaagttggaaaaacggggtgttacaat 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 3121 - 2993
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaa 290  Q
    |||||||| ||  |||||||||||||||| || ||||||  ||| |||||||||| |||| | |||||||  |  | ||| |||||  |||| |||||||    
T  3121 atgagatgttttgaataaatagtaattttactctatttatcttttaaagaagtgtgacatcctgtttaagtcgaat-actctgattattatg-taaaaaa 3024  T
Q  291 tttcaagttggaaaaacggggtgttacaatt 321  Q
    ||||||| ||| |||||||||||||||||||    
T  3023 tttcaagatgggaaaacggggtgttacaatt 2993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1849 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1849
Description:

Target: scaffold1849; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 1008 - 926
Alignment:
Q  238 aaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaat 320  Q
    |||||||||| |||||||||||| | ||   |||| ||||||||    |||| ||||||||||| ||||||||||||||||||    
T  1008 aaagaagtgtgacattccgtttatgttgaaatactctgatttatatgtaaaattttcaagttgggaaaacggggtgttacaat 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 642 - 676
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  642 taaaaaatttcaagttgggaaaacggggtgttaca 676  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 318
Target Start/End: Original strand, 6620 - 6661
Alignment:
Q  276 atttatgctaaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  6620 atttatgcaaaaaaatt-caagttggaaaaacggggtgttaca 6661  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 17290 - 17405
Alignment:
Q  206 aataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttttactatgatt--tatgctaaaaaatttcaagttggaa 303  Q
    |||||||||||||| | || ||||||  ||| |||| ||||| |||| | ||||||| || || ||| |||||  |||| ||||||||||||||||||      
T  17290 aataaatagtaattctactctatttatcttttaaagtagtgtgacatcctgtttaagttgatt-actctgattattatg-taaaaaatttcaagttgggc 17387  T
Q  304 aaacggggtgttacaatt 321  Q
    ||||||||||||||||||    
T  17388 aaacggggtgttacaatt 17405  T

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Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 18616 - 18650
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||||||||||| ||||||||    
T  18616 taaaaaatttcaagttggaaaaacggagtgttaca 18650  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 319
Target Start/End: Complemental strand, 23961 - 23832
Alignment:
Q  193 atgagatgattgaaataaatagtaattttgctatatttacgtttgaaagaagtgtaacattccgtttaaggtgttt---tactatgatt--tatgctaaa 287  Q
    |||||||| ||||| |||||||||||| | |||||||||  ||| |||| ||||| |||| | ||||||| || ||   |||| |||||  |||| ||||    
T  23961 atgagatgtttgaa-taaatagtaattctactatatttatcttttaaagtagtgtgacatcctgtttaagttgattaattactctgattattatg-taaa 23864  T
Q  288 aaatttcaagttggaaaaacggggtgttacaa 319  Q
    |  |||||||||||||||||||||||||||||    
T  23863 atgtttcaagttggaaaaacggggtgttacaa 23832  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 318
Target Start/End: Original strand, 67053 - 67087
Alignment:
Q  284 taaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    |||||||||||||||||| ||||||||||||||||    
T  67053 taaaaaatttcaagttgggaaaacggggtgttaca 67087  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 66341 - 66259
Alignment:
Q  237 gaaagaagtgtaacattccgtttaaggtgttttactatgatttatgctaaaaaatttcaagttggaaaaacggggtgttacaa 319  Q
    |||||||||| | ||||||||||||||||||||||| | |||| |   | ||| ||||||| ||| | |||||||||||||||    
T  66341 gaaagaagtgcagcattccgtttaaggtgttttactctaatttttatgagaaattttcaagatgggataacggggtgttacaa 66259  T

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Target: scaffold0594 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 1972 - 1939
Alignment:
Q  285 aaaaaatttcaagttggaaaaacggggtgttaca 318  Q
    ||||||||||| ||||||||||||||||||||||    
T  1972 aaaaaatttcatgttggaaaaacggggtgttaca 1939  T

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