View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16410_low_15 (Length: 349)
Name: NF16410_low_15
Description: NF16410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16410_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 23 - 343
Target Start/End: Complemental strand, 37450291 - 37449971
Alignment:
| Q |
23 |
tgatagtgcaaaaactctaatacaatgaagaaacctccaaataaagagaaaaacatggtgctctcatttatcagcgaaagtatttccaagtttccaaccg |
122 |
Q |
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| T |
37450291 |
tgatagtgcaaaaactctaatacaatgaagaaacctccaaataaagagaaaaacatggtgctctcatttatcagcgaaagtatttccaagtttccaaccg |
37450192 |
T |
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| Q |
123 |
ataaagtatagtttgaatgtaaaggcaaagaagaatcttgaatagtgagaagaaatgtttgaaataaacaattttttaaattttaatggttccagatcgg |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
37450191 |
ataaagtatagtttgaatgtaaaggcaaagaagaatcttgaaaagtgagaagaaatgtttgaaataaacaatttttttaattttaatggttccagatcgg |
37450092 |
T |
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| Q |
223 |
tttcgtgaactccagattttaaacggtggaaaaggaagagattgaaatgatttctttcttcttccttgcacaagtcctcttttgcgaggcaaaacatcaa |
322 |
Q |
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| T |
37450091 |
tttcgtgaactccagattttaaacggtggaaaaggaagagattgaaatgatttctttcttcttccttgcacaagtcctcttttgcgaggcaaaacatcaa |
37449992 |
T |
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| Q |
323 |
aacctcttcatttcttctctc |
343 |
Q |
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||||||||||||||||||||| |
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| T |
37449991 |
aacctcttcatttcttctctc |
37449971 |
T |
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