View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16414_low_12 (Length: 327)
Name: NF16414_low_12
Description: NF16414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16414_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 45986066 - 45985771
Alignment:
| Q |
18 |
aacttcttaggagacgatccagaattagcttcagccatcttatggttacagaactagagttctttgttcccatactgcctaggtgtacatagaaacttgg |
117 |
Q |
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| T |
45986066 |
aacttcttaggagatgatccagaattggcttcaaccatcttatggttacagaactagagttctttgttcccatacttcctaggtgtacatagaaacttgg |
45985967 |
T |
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| Q |
118 |
aagaaaatttgtattttctccaatagaatagacaagacatgaatcagtatttgagaatcttatgttctctgcaatttagtggtagcttctgttaggagtg |
217 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45985966 |
aagaaaatttgtattttctcca-tagaatagacaagacatgaatcagtatttgagaatcttatgttctctgcaatttagtggtagcttctgttaggagtg |
45985868 |
T |
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| Q |
218 |
tgcatctttcctttgtgaaacatgtgttacaactgttcttagcggttttagagggttagttagctgaggtttcacattctattctattatatggttc |
314 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45985867 |
tgcatctttcctttgtgaatcatgtgttacaactgttcttagcggttttagagggttagttagctgaggtttcacattctattctattatatggttc |
45985771 |
T |
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