View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16416_high_15 (Length: 308)
Name: NF16416_high_15
Description: NF16416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16416_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 43 - 294
Target Start/End: Original strand, 37303316 - 37303567
Alignment:
| Q |
43 |
aagttaaccactcttcccactgtcaacgaccgtctccgccgtttcctcctcccaagtaactacatcaacatccgtcgccacgtaaaacgtctatggattg |
142 |
Q |
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| T |
37303316 |
aagttaaccactcttcccactgtcaacgaccgtttccgccgtttcctcctcccaagtaactacatcaacatccgtcgccacgtaaaacgtctctggattg |
37303415 |
T |
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| Q |
143 |
aacatgccgacgctgtcaccgacctcacagtctccaacggcgttatctactcggtttcatgggacaaaacactcaaaatatggagaatctctgatcttcg |
242 |
Q |
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||||||||||||| ||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37303416 |
aacatgccgacgccgtcaccgaccttgcagtttcaaacggcgttatctactccgtttcatgggacaaaacactcaaaatatggagaatctctgatcttcg |
37303515 |
T |
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| Q |
243 |
ttgcttagaatccctcaaagcacacgaagatgcggtcaacgcggttgtagtt |
294 |
Q |
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| T |
37303516 |
ttgcttagaatccctcaaagcacacgaagatgcggtcaacgcggttgcagtt |
37303567 |
T |
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