View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16416_low_17 (Length: 300)
Name: NF16416_low_17
Description: NF16416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16416_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 13768712 - 13768996
Alignment:
| Q |
1 |
aaatgaactcatgaagtatgttacttcattgaaaaaagagttcattagctcattgataccctttaattcacaactaacggagaagcatgctgaaattatt |
100 |
Q |
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| T |
13768712 |
aaatgaactcatgaagtatgttacttcattgaaaaaagagttcattagctcattgataccctttaattcacaactaatggagaagcatgctgaaattatt |
13768811 |
T |
|
| Q |
101 |
caggttcaagaagtttgtgataagataacagaagctgaggctctagctattattgaatttgaagagaaaaagttaatgatagaagaacttgaggatgata |
200 |
Q |
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| T |
13768812 |
caggttcaagaagtttgtgataagataacagaagctgaggctctagctattattgaatttgaagagaaaaagttaatgatagaagaacttgaggatgata |
13768911 |
T |
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| Q |
201 |
ttaatgacatggaaaataaactaaaattgcaggaagagaatttgagccagttaaaactacttgcatgtgatattgaaatggaaat |
285 |
Q |
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| T |
13768912 |
ttaatgacatggaaaataaactaaaattgcaggaagagaatttgagccagttaaaactacttgcatgtgatattgaaatggaaat |
13768996 |
T |
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