View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1642-INSERTION-3 (Length: 135)
Name: NF1642-INSERTION-3
Description: NF1642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1642-INSERTION-3 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 104; Significance: 3e-52; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 50122269 - 50122394
Alignment:
| Q |
8 |
tgcaagaccgagaacatacatgtaaaagtgttaaaaatttcacgttgaatgtgatatatatctcacgttacatataagtcatgtagaacttatttaagtt |
107 |
Q |
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| T |
50122269 |
tgcaagaccgagaacatacatgtaaa-gtgttaaaaatttcacattgaatgtgatatatatctcacgttacgtataagtcatgtagaactta-ttaagtt |
50122366 |
T |
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| Q |
108 |
caattcaaattctaaaatagatcaatta |
135 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
50122367 |
caattcaaattctaaaatagatcaatta |
50122394 |
T |
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