View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1642-Insertion-10 (Length: 575)
Name: NF1642-Insertion-10
Description: NF1642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1642-Insertion-10 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 8 - 393
Target Start/End: Original strand, 38583652 - 38584045
Alignment:
| Q |
8 |
attttcacttctaaaatcctcaaccaccctttttcaattcatctccgatcaggttcatat--------atatattttacgttttcttgtttctttttctc |
99 |
Q |
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| T |
38583652 |
attttcacttctaaaatcctcaaccaccctttttcaattcatctccgatcaggttcatatatatatatatatattttacgttttcttgtttctttttctc |
38583751 |
T |
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| Q |
100 |
acacactttctcttgtattaatgcacttcatattgattataacgataatggacgtaaattttaatgtttttctcgacagcatgcagtaactgaaggtaga |
199 |
Q |
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| T |
38583752 |
acacactttctcttgtattaatgcacttcatattgattctaacgataatggacgtaaattttaatgtttttctcgacagcatgcagcaactgaaggtaga |
38583851 |
T |
|
| Q |
200 |
tacgtgttgaatgaaagttaaacagaaccaacaaagattcgtaacaatctataattaacgatgtcgaatgatgttgtgaaagtgaagagagaaacgattg |
299 |
Q |
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| T |
38583852 |
tacgtgttgaatgaaagttaaacagaaccaacaaagattcgtaacaatctataattaacgatgtcgaatgatgttgtgaaagtgaagagagaaacgattg |
38583951 |
T |
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| Q |
300 |
cagcatgcatgacctgtccactatgtaacaatttgttcaaacaacctacaactatatctgaatgtcttcacacgtgtaagctcttcgatctata |
393 |
Q |
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| T |
38583952 |
cagcatgcatgacctgtccactatgtaacaatttgttcaaacaacctacaactatatctgaatgtcttcacacgtgtaagctcttcgatctata |
38584045 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 533
Target Start/End: Original strand, 38584109 - 38584185
Alignment:
| Q |
457 |
acttcttcatgtgggtcactgttcattcagattcatatggttggttatttcgtaattttgatgattgtcaaaaaaat |
533 |
Q |
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| T |
38584109 |
acttcttcatgtgggtcactgttcattcagattcatatggttggttatttcgtaattttgatgattgtcaaaaaaat |
38584185 |
T |
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