View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16420_high_2 (Length: 540)

Name: NF16420_high_2
Description: NF16420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16420_high_2
NF16420_high_2
[»] chr7 (84 HSPs)
chr7 (155-393)||(35300326-35300564)
chr7 (190-391)||(23704369-23704570)
chr7 (155-391)||(26722859-26723074)
chr7 (155-387)||(7873124-7873344)
chr7 (288-388)||(4843432-4843532)
chr7 (155-274)||(3012289-3012408)
chr7 (155-387)||(22206590-22206810)
chr7 (155-387)||(22227929-22228149)
chr7 (287-391)||(21932642-21932746)
chr7 (155-387)||(5991324-5991541)
chr7 (315-393)||(28693901-28693979)
chr7 (155-275)||(41759624-41759744)
chr7 (308-393)||(3012454-3012539)
chr7 (313-393)||(25688109-25688189)
chr7 (172-271)||(19377391-19377490)
chr7 (322-393)||(41759525-41759596)
chr7 (308-393)||(814871-814956)
chr7 (318-387)||(42439466-42439535)
chr7 (272-391)||(21688244-21688364)
chr7 (202-274)||(38129010-38129082)
chr7 (176-274)||(4843304-4843402)
chr7 (288-393)||(19377523-19377629)
chr7 (206-272)||(21688145-21688211)
chr7 (155-267)||(25688202-25688314)
chr7 (198-274)||(28694057-28694133)
chr7 (313-393)||(30852447-30852527)
chr7 (502-540)||(2354888-2354926)
chr7 (502-540)||(3497608-3497646)
chr7 (502-540)||(4887604-4887642)
chr7 (502-540)||(19306711-19306749)
chr7 (502-540)||(35157175-35157213)
chr7 (502-540)||(45236929-45236967)
chr7 (502-540)||(48612516-48612554)
chr7 (502-540)||(48729775-48729813)
chr7 (503-540)||(27396405-27396442)
chr7 (312-393)||(38128879-38128960)
chr7 (315-392)||(38991076-38991153)
chr7 (206-278)||(38991173-38991245)
chr7 (501-537)||(40809043-40809079)
chr7 (502-537)||(1323682-1323717)
chr7 (505-540)||(4674400-4674435)
chr7 (502-540)||(1573932-1573970)
chr7 (502-540)||(4106553-4106591)
chr7 (502-540)||(6596541-6596579)
chr7 (502-540)||(9379990-9380028)
chr7 (502-540)||(10061107-10061145)
chr7 (502-540)||(18944923-18944961)
chr7 (502-540)||(29151582-29151620)
chr7 (502-540)||(31300088-31300126)
chr7 (502-540)||(31717296-31717334)
chr7 (502-540)||(32251426-32251464)
chr7 (502-540)||(35849294-35849332)
chr7 (506-540)||(36280016-36280050)
chr7 (502-540)||(45041824-45041862)
chr7 (495-536)||(46416541-46416582)
chr7 (210-274)||(815002-815066)
chr7 (265-305)||(3012432-3012472)
chr7 (508-540)||(33512802-33512834)
chr7 (202-274)||(42439591-42439663)
chr7 (501-540)||(2228171-2228210)
chr7 (505-540)||(7312544-7312579)
chr7 (501-540)||(33628026-33628065)
chr7 (497-540)||(37410793-37410836)
chr7 (502-540)||(788937-788975)
chr7 (502-540)||(4069207-4069245)
chr7 (502-540)||(5222664-5222702)
chr7 (502-540)||(17895633-17895671)
chr7 (502-540)||(20350261-20350299)
chr7 (506-540)||(29628475-29628509)
chr7 (496-530)||(33228692-33228726)
chr7 (265-319)||(38128932-38128986)
chr7 (502-540)||(42557593-42557631)
chr7 (502-540)||(47182802-47182840)
chr7 (502-532)||(47584770-47584800)
chr7 (503-540)||(6384609-6384646)
chr7 (511-540)||(10703982-10704011)
chr7 (356-393)||(19400251-19400288)
chr7 (356-393)||(27387175-27387212)
chr7 (356-393)||(38575137-38575174)
chr7 (308-393)||(41862244-41862329)
chr7 (172-228)||(5850729-5850785)
chr7 (508-540)||(13769714-13769746)
chr7 (508-540)||(21226070-21226102)
chr7 (216-272)||(21932798-21932854)
[»] chr6 (50 HSPs)
chr6 (155-391)||(15528926-15529162)
chr6 (155-393)||(9696035-9696273)
chr6 (181-400)||(2941228-2941447)
chr6 (155-391)||(15122023-15122259)
chr6 (155-393)||(9046813-9047051)
chr6 (155-388)||(34248916-34249137)
chr6 (206-393)||(23663657-23663844)
chr6 (289-392)||(10397708-10397811)
chr6 (265-393)||(31188210-31188338)
chr6 (265-392)||(2836066-2836193)
chr6 (206-393)||(1780941-1781107)
chr6 (155-274)||(2836217-2836336)
chr6 (289-400)||(28614295-28614406)
chr6 (272-393)||(31200054-31200176)
chr6 (292-387)||(14938826-14938921)
chr6 (288-404)||(34188911-34189027)
chr6 (313-387)||(339476-339550)
chr6 (297-393)||(2960794-2960890)
chr6 (206-274)||(339366-339434)
chr6 (501-540)||(4083585-4083624)
chr6 (502-540)||(2314690-2314728)
chr6 (502-540)||(8448233-8448271)
chr6 (502-540)||(8457037-8457075)
chr6 (502-540)||(8939625-8939663)
chr6 (502-540)||(10181044-10181082)
chr6 (502-540)||(17534614-17534652)
chr6 (502-540)||(31205274-31205312)
chr6 (206-275)||(10397808-10397877)
chr6 (155-228)||(28614434-28614507)
chr6 (500-540)||(26269242-26269282)
chr6 (505-540)||(1241597-1241632)
chr6 (505-540)||(18861858-18861893)
chr6 (505-540)||(32107926-32107961)
chr6 (502-540)||(735444-735482)
chr6 (502-540)||(4480473-4480511)
chr6 (502-540)||(10263162-10263200)
chr6 (502-540)||(13507401-13507439)
chr6 (502-540)||(13540252-13540290)
chr6 (502-540)||(15953233-15953271)
chr6 (501-540)||(5603538-5603577)
chr6 (501-540)||(7098804-7098843)
chr6 (505-540)||(16244413-16244448)
chr6 (502-540)||(16496743-16496782)
chr6 (505-540)||(21513074-21513109)
chr6 (502-540)||(4891007-4891045)
chr6 (502-540)||(4996871-4996909)
chr6 (502-540)||(8329649-8329687)
chr6 (502-540)||(32643819-32643857)
chr6 (155-229)||(34188782-34188856)
chr6 (503-540)||(4128945-4128982)
[»] chr1 (70 HSPs)
chr1 (155-393)||(14727309-14727547)
chr1 (155-393)||(25007455-25007681)
chr1 (206-393)||(37153888-37154075)
chr1 (155-393)||(44305403-44305629)
chr1 (239-393)||(1428317-1428471)
chr1 (206-393)||(27583915-27584098)
chr1 (155-393)||(8239270-8239489)
chr1 (155-393)||(25011435-25011660)
chr1 (158-393)||(31844539-31844753)
chr1 (172-305)||(6331682-6331815)
chr1 (265-391)||(4641937-4642063)
chr1 (208-393)||(27460728-27460895)
chr1 (308-393)||(33468869-33468954)
chr1 (308-393)||(34459253-34459338)
chr1 (289-406)||(4774085-4774202)
chr1 (315-392)||(6331804-6331881)
chr1 (313-393)||(24646185-24646265)
chr1 (314-393)||(49898526-49898605)
chr1 (315-393)||(9527196-9527274)
chr1 (155-269)||(48940438-48940552)
chr1 (170-272)||(24745408-24745508)
chr1 (313-403)||(24745544-24745632)
chr1 (279-400)||(44238736-44238853)
chr1 (308-387)||(6801988-6802067)
chr1 (502-540)||(10635488-10635526)
chr1 (502-540)||(19338269-19338307)
chr1 (502-540)||(28999373-28999411)
chr1 (502-540)||(29005089-29005127)
chr1 (502-540)||(40809304-40809342)
chr1 (502-540)||(40958665-40958703)
chr1 (502-540)||(42631076-42631114)
chr1 (502-540)||(43676115-43676153)
chr1 (502-540)||(48314166-48314204)
chr1 (502-540)||(48391955-48391993)
chr1 (206-274)||(24646083-24646151)
chr1 (242-290)||(33468951-33468999)
chr1 (505-540)||(24119658-24119693)
chr1 (501-540)||(49948239-49948278)
chr1 (502-540)||(5598300-5598338)
chr1 (506-540)||(13555815-13555849)
chr1 (502-540)||(15906258-15906296)
chr1 (502-540)||(17068151-17068189)
chr1 (502-540)||(19279943-19279981)
chr1 (502-540)||(25083210-25083248)
chr1 (502-540)||(35010680-35010718)
chr1 (502-540)||(40685528-40685566)
chr1 (502-540)||(43086562-43086600)
chr1 (502-540)||(49500860-49500898)
chr1 (155-204)||(1428455-1428504)
chr1 (501-534)||(14890285-14890318)
chr1 (501-540)||(270412-270452)
chr1 (364-400)||(11647352-11647388)
chr1 (505-536)||(3315796-3315827)
chr1 (505-540)||(11403171-11403206)
chr1 (501-540)||(26261384-26261423)
chr1 (505-536)||(41445125-41445156)
chr1 (501-540)||(48731847-48731886)
chr1 (506-540)||(3840453-3840487)
chr1 (502-540)||(4126574-4126612)
chr1 (506-540)||(5790061-5790095)
chr1 (506-540)||(15952923-15952957)
chr1 (502-536)||(18475108-18475142)
chr1 (155-193)||(27460687-27460725)
chr1 (506-540)||(32880670-32880704)
chr1 (502-540)||(34010093-34010131)
chr1 (155-204)||(9527036-9527085)
chr1 (511-540)||(20164164-20164193)
chr1 (508-540)||(15331153-15331185)
chr1 (498-530)||(39606399-39606431)
chr1 (508-540)||(41651078-41651110)
[»] chr5 (101 HSPs)
chr5 (155-393)||(35468881-35469120)
chr5 (155-390)||(15675292-15675527)
chr5 (155-390)||(34443957-34444181)
chr5 (155-400)||(30248956-30249189)
chr5 (241-393)||(2476430-2476582)
chr5 (241-393)||(14832709-14832861)
chr5 (155-393)||(33006886-33007103)
chr5 (155-393)||(34846346-34846563)
chr5 (155-387)||(32953572-32953792)
chr5 (265-393)||(15504038-15504166)
chr5 (155-393)||(1672385-1672611)
chr5 (155-393)||(7161982-7162208)
chr5 (155-274)||(16667499-16667618)
chr5 (155-393)||(43228541-43228767)
chr5 (288-393)||(13942651-13942755)
chr5 (288-386)||(12267288-12267385)
chr5 (308-400)||(21069153-21069245)
chr5 (265-368)||(6900856-6900959)
chr5 (155-274)||(17192675-17192794)
chr5 (155-274)||(21068988-21069107)
chr5 (313-400)||(37552051-37552138)
chr5 (313-400)||(37654881-37654968)
chr5 (289-387)||(16567904-16568002)
chr5 (288-390)||(36234456-36234558)
chr5 (313-387)||(37779780-37779854)
chr5 (313-387)||(37607573-37607647)
chr5 (155-230)||(12267459-12267534)
chr5 (172-257)||(37779672-37779757)
chr5 (206-274)||(15503946-15504014)
chr5 (294-368)||(767416-767490)
chr5 (502-540)||(1244272-1244310)
chr5 (502-540)||(2103025-2103063)
chr5 (502-540)||(4164958-4164996)
chr5 (502-540)||(6672240-6672278)
chr5 (502-540)||(12707967-12708005)
chr5 (502-540)||(12878209-12878247)
chr5 (502-540)||(17869215-17869253)
chr5 (502-540)||(18473913-18473951)
chr5 (502-540)||(23311264-23311302)
chr5 (502-540)||(28143323-28143361)
chr5 (502-540)||(36569278-36569316)
chr5 (502-540)||(36726988-36727026)
chr5 (502-540)||(41562457-41562495)
chr5 (155-204)||(2476395-2476444)
chr5 (159-228)||(9738367-9738436)
chr5 (500-540)||(9054062-9054102)
chr5 (170-254)||(37654794-37654878)
chr5 (505-540)||(9902592-9902627)
chr5 (155-258)||(16567782-16567885)
chr5 (505-540)||(29119608-29119643)
chr5 (502-540)||(671150-671188)
chr5 (318-392)||(8214538-8214612)
chr5 (502-540)||(22620742-22620780)
chr5 (502-540)||(24443958-24443996)
chr5 (506-540)||(25328395-25328429)
chr5 (502-540)||(26267092-26267130)
chr5 (502-540)||(34675746-34675784)
chr5 (502-540)||(36136953-36136991)
chr5 (502-540)||(42068540-42068578)
chr5 (502-540)||(42337934-42337972)
chr5 (502-540)||(42448210-42448248)
chr5 (352-393)||(2985868-2985909)
chr5 (173-274)||(767283-767380)
chr5 (504-540)||(38682929-38682965)
chr5 (508-540)||(40595962-40595994)
chr5 (501-532)||(6029610-6029641)
chr5 (501-540)||(6041935-6041974)
chr5 (501-536)||(9640629-9640664)
chr5 (505-540)||(10393593-10393628)
chr5 (505-540)||(19836178-19836213)
chr5 (502-540)||(21728659-21728698)
chr5 (502-540)||(23074735-23074774)
chr5 (497-540)||(23310394-23310437)
chr5 (356-391)||(25034988-25035023)
chr5 (178-257)||(37607471-37607550)
chr5 (501-540)||(40045007-40045046)
chr5 (502-540)||(1269610-1269648)
chr5 (502-540)||(1287314-1287352)
chr5 (502-540)||(1650290-1650328)
chr5 (502-540)||(2706221-2706259)
chr5 (502-540)||(4444939-4444976)
chr5 (502-540)||(4617857-4617895)
chr5 (506-540)||(6053142-6053176)
chr5 (502-540)||(7179392-7179430)
chr5 (502-540)||(12665094-12665132)
chr5 (502-540)||(12769216-12769254)
chr5 (502-540)||(16496599-16496637)
chr5 (502-540)||(18625706-18625744)
chr5 (502-540)||(24652405-24652443)
chr5 (502-536)||(33617095-33617129)
chr5 (502-540)||(36185136-36185174)
chr5 (502-540)||(37142117-37142155)
chr5 (506-540)||(37940921-37940955)
chr5 (502-540)||(39143440-39143478)
chr5 (502-540)||(39151017-39151055)
chr5 (265-303)||(39605809-39605847)
chr5 (170-227)||(37551964-37552021)
chr5 (173-229)||(13942833-13942889)
chr5 (501-533)||(24051401-24051433)
chr5 (508-540)||(27004056-27004088)
chr5 (508-540)||(29069633-29069665)
[»] chr4 (100 HSPs)
chr4 (155-390)||(4728538-4728773)
chr4 (155-393)||(4552177-4552403)
chr4 (155-393)||(2017335-2017561)
chr4 (155-393)||(46645583-46645821)
chr4 (206-393)||(10715686-10715874)
chr4 (206-393)||(10929456-10929644)
chr4 (155-393)||(2576151-2576390)
chr4 (206-393)||(40969255-40969442)
chr4 (155-393)||(10058517-10058734)
chr4 (270-388)||(32005978-32006096)
chr4 (265-393)||(2521796-2521924)
chr4 (206-393)||(31364166-31364332)
chr4 (296-393)||(52373875-52373972)
chr4 (172-274)||(25237573-25237675)
chr4 (287-403)||(43003072-43003188)
chr4 (283-370)||(1585777-1585864)
chr4 (294-373)||(50099989-50100068)
chr4 (315-393)||(11826946-11827024)
chr4 (155-387)||(9003548-9003767)
chr4 (313-393)||(41972340-41972420)
chr4 (155-267)||(14044337-14044449)
chr4 (308-390)||(25237721-25237803)
chr4 (189-274)||(36947532-36947617)
chr4 (288-393)||(50383987-50384091)
chr4 (313-393)||(14044462-14044542)
chr4 (172-267)||(9694096-9694191)
chr4 (288-382)||(49745168-49745263)
chr4 (207-274)||(50099872-50099939)
chr4 (172-274)||(2521948-2522049)
chr4 (12-98)||(31476865-31476951)
chr4 (313-403)||(32828281-32828371)
chr4 (206-274)||(41972454-41972522)
chr4 (172-227)||(11827078-11827133)
chr4 (502-540)||(1982560-1982598)
chr4 (502-540)||(3084333-3084371)
chr4 (502-540)||(3848909-3848947)
chr4 (502-540)||(5397031-5397069)
chr4 (502-540)||(9569474-9569512)
chr4 (502-540)||(12821164-12821202)
chr4 (502-540)||(23974733-23974771)
chr4 (502-540)||(24712087-24712125)
chr4 (502-540)||(30044675-30044713)
chr4 (502-540)||(42154229-42154267)
chr4 (502-540)||(42856562-42856600)
chr4 (502-540)||(46488208-46488246)
chr4 (502-540)||(49535884-49535922)
chr4 (502-540)||(49882800-49882838)
chr4 (155-204)||(1585701-1585750)
chr4 (155-204)||(32005906-32005955)
chr4 (313-393)||(9694204-9694282)
chr4 (155-274)||(31929048-31929167)
chr4 (501-540)||(35318538-35318577)
chr4 (505-540)||(35828276-35828311)
chr4 (506-540)||(1033540-1033574)
chr4 (502-540)||(1083507-1083545)
chr4 (502-540)||(7512766-7512804)
chr4 (502-540)||(13389019-13389057)
chr4 (502-540)||(24550812-24550850)
chr4 (502-540)||(28010142-28010180)
chr4 (502-540)||(29428054-29428092)
chr4 (502-540)||(29894409-29894447)
chr4 (502-540)||(31263592-31263630)
chr4 (506-540)||(47462127-47462161)
chr4 (212-274)||(49745076-49745138)
chr4 (506-540)||(54907983-54908017)
chr4 (155-204)||(6017108-6017157)
chr4 (507-540)||(37166142-37166175)
chr4 (503-540)||(42412079-42412116)
chr4 (501-540)||(4379305-4379344)
chr4 (206-269)||(8901834-8901897)
chr4 (501-540)||(18371344-18371383)
chr4 (502-537)||(29648763-29648798)
chr4 (505-540)||(33416671-33416706)
chr4 (505-540)||(37050703-37050738)
chr4 (501-540)||(44171647-44171686)
chr4 (207-274)||(52373770-52373837)
chr4 (502-540)||(3037236-3037274)
chr4 (502-540)||(10757978-10758016)
chr4 (502-540)||(10971149-10971187)
chr4 (502-540)||(14285094-14285132)
chr4 (506-540)||(18813373-18813407)
chr4 (502-540)||(21172878-21172916)
chr4 (502-540)||(26440966-26441004)
chr4 (502-540)||(34684202-34684239)
chr4 (502-540)||(36526232-36526270)
chr4 (502-540)||(36752358-36752396)
chr4 (502-540)||(50779882-50779920)
chr4 (503-540)||(17815233-17815270)
chr4 (356-393)||(25182744-25182781)
chr4 (352-393)||(26438250-26438291)
chr4 (42-99)||(31034103-31034160)
chr4 (177-274)||(41955227-41955324)
chr4 (356-393)||(42843981-42844018)
chr4 (508-540)||(11673298-11673330)
chr4 (502-538)||(12694522-12694558)
chr4 (502-530)||(13632088-13632116)
chr4 (508-540)||(24407502-24407534)
chr4 (508-540)||(28033197-28033229)
chr4 (508-540)||(37913318-37913350)
chr4 (502-530)||(55853416-55853444)
[»] chr8 (76 HSPs)
chr8 (155-393)||(3383917-3384155)
chr8 (155-393)||(36406387-36406625)
chr8 (206-393)||(28928089-28928277)
chr8 (155-393)||(24965024-24965229)
chr8 (308-393)||(35384263-35384348)
chr8 (287-392)||(34282759-34282864)
chr8 (294-393)||(27321760-27321859)
chr8 (155-274)||(13243073-13243192)
chr8 (287-390)||(13243242-13243345)
chr8 (155-274)||(39431679-39431798)
chr8 (313-393)||(38214863-38214943)
chr8 (189-274)||(8968355-8968435)
chr8 (501-540)||(8547221-8547260)
chr8 (502-540)||(2733615-2733653)
chr8 (502-540)||(4312132-4312170)
chr8 (502-540)||(4430826-4430864)
chr8 (502-540)||(4977125-4977163)
chr8 (502-540)||(6317299-6317337)
chr8 (502-540)||(27928157-27928195)
chr8 (502-540)||(34711646-34711684)
chr8 (502-540)||(36586481-36586519)
chr8 (502-540)||(38070572-38070610)
chr8 (500-540)||(11100379-11100419)
chr8 (500-540)||(24654971-24655011)
chr8 (505-540)||(25213631-25213666)
chr8 (505-540)||(26690696-26690731)
chr8 (505-540)||(37295128-37295163)
chr8 (501-540)||(43820866-43820905)
chr8 (502-540)||(3054023-3054061)
chr8 (502-540)||(7772141-7772179)
chr8 (502-540)||(13634845-13634883)
chr8 (502-540)||(13735258-13735296)
chr8 (502-540)||(14188089-14188127)
chr8 (502-540)||(19649589-19649627)
chr8 (502-540)||(25199045-25199083)
chr8 (502-540)||(25250784-25250822)
chr8 (502-540)||(26737970-26738008)
chr8 (502-540)||(33067479-33067517)
chr8 (502-540)||(37708538-37708576)
chr8 (502-540)||(38953571-38953609)
chr8 (506-540)||(44814866-44814900)
chr8 (172-268)||(31500854-31500948)
chr8 (504-540)||(6845074-6845110)
chr8 (508-540)||(7432586-7432618)
chr8 (496-540)||(25893844-25893888)
chr8 (273-329)||(39431591-39431647)
chr8 (501-532)||(10286564-10286595)
chr8 (505-540)||(14243701-14243736)
chr8 (505-540)||(26675559-26675594)
chr8 (208-275)||(34282913-34282980)
chr8 (505-540)||(34540155-34540190)
chr8 (501-540)||(35421709-35421748)
chr8 (502-540)||(2442761-2442799)
chr8 (502-540)||(4694778-4694816)
chr8 (502-540)||(5895886-5895924)
chr8 (502-540)||(8569944-8569982)
chr8 (506-540)||(9998734-9998768)
chr8 (506-540)||(10096615-10096649)
chr8 (502-540)||(15129636-15129674)
chr8 (502-540)||(17649932-17649970)
chr8 (502-536)||(20990508-20990542)
chr8 (502-540)||(23554869-23554907)
chr8 (502-540)||(23872802-23872840)
chr8 (502-540)||(27545007-27545045)
chr8 (502-540)||(31639193-31639231)
chr8 (502-536)||(34744361-34744395)
chr8 (502-540)||(37817375-37817413)
chr8 (502-540)||(40344489-40344527)
chr8 (502-532)||(40744341-40744371)
chr8 (502-540)||(41562441-41562479)
chr8 (507-540)||(9569728-9569761)
chr8 (315-368)||(31500736-31500789)
chr8 (503-540)||(41746739-41746776)
chr8 (190-274)||(6377530-6377614)
chr8 (500-536)||(10617782-10617818)
chr8 (508-540)||(44604912-44604944)
[»] chr3 (80 HSPs)
chr3 (155-393)||(7500941-7501179)
chr3 (155-393)||(14461062-14461288)
chr3 (206-393)||(28311313-28311500)
chr3 (155-393)||(44047581-44047806)
chr3 (155-393)||(53651895-53652121)
chr3 (155-393)||(12909817-12910049)
chr3 (155-393)||(37516627-37516844)
chr3 (172-393)||(26370940-26371140)
chr3 (241-387)||(43700097-43700243)
chr3 (157-393)||(25391743-25391946)
chr3 (274-391)||(33178992-33179109)
chr3 (288-391)||(41218255-41218358)
chr3 (155-273)||(41218389-41218507)
chr3 (172-267)||(26278365-26278460)
chr3 (178-267)||(35077232-35077321)
chr3 (313-393)||(53987974-53988055)
chr3 (499-540)||(6583326-6583367)
chr3 (206-274)||(33179141-33179209)
chr3 (501-540)||(4833200-4833239)
chr3 (502-540)||(2687558-2687596)
chr3 (502-540)||(3917765-3917803)
chr3 (502-540)||(4232268-4232306)
chr3 (502-540)||(8381078-8381116)
chr3 (313-359)||(9600460-9600506)
chr3 (502-540)||(13525168-13525206)
chr3 (502-540)||(21402749-21402787)
chr3 (502-540)||(24910379-24910417)
chr3 (502-540)||(30553059-30553097)
chr3 (502-540)||(32961069-32961107)
chr3 (502-540)||(41464663-41464701)
chr3 (502-540)||(44037535-44037573)
chr3 (190-267)||(30172616-30172693)
chr3 (155-204)||(44625695-44625744)
chr3 (315-387)||(26278475-26278547)
chr3 (206-274)||(53068278-53068346)
chr3 (501-540)||(27002831-27002870)
chr3 (501-540)||(27396852-27396891)
chr3 (506-540)||(1242220-1242254)
chr3 (502-540)||(2789069-2789107)
chr3 (502-540)||(2900254-2900292)
chr3 (502-540)||(4976799-4976837)
chr3 (502-540)||(6083232-6083270)
chr3 (506-540)||(11312593-11312627)
chr3 (502-540)||(22371449-22371487)
chr3 (502-540)||(24250724-24250762)
chr3 (502-540)||(24650638-24650676)
chr3 (502-540)||(24751752-24751790)
chr3 (502-540)||(28266525-28266563)
chr3 (502-540)||(29212156-29212194)
chr3 (502-540)||(34397679-34397717)
chr3 (502-540)||(38127933-38127971)
chr3 (502-540)||(46838818-46838856)
chr3 (502-540)||(47408839-47408877)
chr3 (502-540)||(47410843-47410881)
chr3 (502-540)||(53583960-53583998)
chr3 (502-540)||(54097531-54097569)
chr3 (155-204)||(43700229-43700278)
chr3 (313-369)||(41358541-41358597)
chr3 (356-392)||(53710667-53710703)
chr3 (501-540)||(17500925-17500964)
chr3 (502-540)||(28171070-28171109)
chr3 (505-540)||(41921508-41921543)
chr3 (502-533)||(43605674-43605705)
chr3 (502-540)||(8507931-8507969)
chr3 (502-540)||(8826624-8826662)
chr3 (502-540)||(10047871-10047909)
chr3 (502-540)||(14868946-14868983)
chr3 (502-540)||(15003627-15003665)
chr3 (502-540)||(19921403-19921441)
chr3 (502-540)||(24657410-24657448)
chr3 (502-540)||(32590971-32591009)
chr3 (502-540)||(37124215-37124253)
chr3 (502-540)||(40559673-40559711)
chr3 (502-540)||(43898054-43898092)
chr3 (206-267)||(9600386-9600447)
chr3 (501-530)||(11029661-11029690)
chr3 (356-393)||(31989298-31989335)
chr3 (503-540)||(37312528-37312565)
chr3 (206-267)||(53987900-53987961)
chr3 (508-540)||(10474005-10474037)
[»] scaffold0075 (2 HSPs)
scaffold0075 (206-393)||(11554-11741)
scaffold0075 (155-390)||(6902-7124)
[»] chr2 (71 HSPs)
chr2 (206-393)||(41114767-41114954)
chr2 (206-390)||(6799786-6799970)
chr2 (210-393)||(29257401-29257584)
chr2 (155-393)||(13203759-13203985)
chr2 (208-373)||(18299060-18299225)
chr2 (265-393)||(303989-304117)
chr2 (155-274)||(25562915-25563034)
chr2 (287-390)||(41010624-41010727)
chr2 (313-391)||(2475944-2476022)
chr2 (265-393)||(12000646-12000775)
chr2 (288-387)||(17148909-17149008)
chr2 (315-393)||(22572619-22572697)
chr2 (308-391)||(17249463-17249546)
chr2 (206-305)||(22572686-22572785)
chr2 (277-393)||(15651342-15651458)
chr2 (294-393)||(25563091-25563190)
chr2 (202-274)||(17148808-17148879)
chr2 (314-387)||(33909250-33909323)
chr2 (308-368)||(45444376-45444436)
chr2 (242-305)||(2475894-2475957)
chr2 (318-393)||(16220926-16221001)
chr2 (502-540)||(2287400-2287438)
chr2 (502-540)||(13268066-13268104)
chr2 (502-540)||(15897213-15897251)
chr2 (502-540)||(20251576-20251614)
chr2 (502-540)||(23080189-23080227)
chr2 (502-540)||(32023251-32023289)
chr2 (502-540)||(33607042-33607080)
chr2 (502-540)||(34667043-34667081)
chr2 (502-540)||(36754832-36754870)
chr2 (502-540)||(38490491-38490529)
chr2 (502-540)||(40592312-40592350)
chr2 (502-540)||(42160348-42160386)
chr2 (189-274)||(34756705-34756790)
chr2 (501-540)||(6731540-6731579)
chr2 (501-540)||(7958075-7958114)
chr2 (352-387)||(26655702-26655737)
chr2 (505-540)||(34481762-34481797)
chr2 (207-274)||(41010507-41010574)
chr2 (502-540)||(727380-727418)
chr2 (502-540)||(7975105-7975143)
chr2 (502-540)||(12236120-12236158)
chr2 (506-540)||(18368797-18368831)
chr2 (502-540)||(18999328-18999366)
chr2 (502-540)||(35476581-35476619)
chr2 (502-540)||(35706851-35706889)
chr2 (502-540)||(42200953-42200991)
chr2 (503-540)||(39070019-39070056)
chr2 (501-536)||(10392643-10392678)
chr2 (501-540)||(16010704-16010743)
chr2 (505-540)||(38463141-38463176)
chr2 (502-540)||(4014904-4014942)
chr2 (499-540)||(11543890-11543932)
chr2 (206-271)||(12000553-12000619)
chr2 (502-540)||(23497603-23497641)
chr2 (502-540)||(23957051-23957089)
chr2 (502-540)||(28855505-28855543)
chr2 (502-540)||(29741049-29741087)
chr2 (502-540)||(35687877-35687915)
chr2 (502-540)||(40812016-40812054)
chr2 (502-540)||(41164739-41164777)
chr2 (502-540)||(42007306-42007344)
chr2 (502-540)||(43035439-43035477)
chr2 (502-540)||(44948018-44948056)
chr2 (502-540)||(45049384-45049422)
chr2 (364-393)||(1542853-1542882)
chr2 (503-540)||(11816642-11816678)
chr2 (500-533)||(32120607-32120640)
chr2 (356-393)||(42755580-42755617)
chr2 (508-540)||(19967739-19967771)
chr2 (352-396)||(39368584-39368628)
[»] scaffold0618 (1 HSPs)
scaffold0618 (210-393)||(1730-1913)
[»] scaffold0638 (2 HSPs)
scaffold0638 (315-387)||(4217-4289)
scaffold0638 (155-267)||(4090-4202)
[»] scaffold0021 (3 HSPs)
scaffold0021 (171-400)||(109194-109419)
scaffold0021 (171-229)||(112276-112334)
scaffold0021 (317-400)||(112095-112179)
[»] scaffold0432 (1 HSPs)
scaffold0432 (501-540)||(9365-9404)
[»] scaffold0402 (1 HSPs)
scaffold0402 (502-540)||(1332-1370)
[»] scaffold0287 (1 HSPs)
scaffold0287 (502-540)||(1149-1187)
[»] scaffold0179 (1 HSPs)
scaffold0179 (502-540)||(4106-4144)
[»] scaffold0013 (1 HSPs)
scaffold0013 (502-540)||(90568-90606)
[»] scaffold0457 (1 HSPs)
scaffold0457 (506-540)||(6782-6816)
[»] scaffold0061 (1 HSPs)
scaffold0061 (502-540)||(8950-8988)
[»] scaffold0008 (1 HSPs)
scaffold0008 (502-540)||(39404-39442)
[»] scaffold0778 (1 HSPs)
scaffold0778 (501-540)||(816-855)
[»] scaffold0244 (1 HSPs)
scaffold0244 (501-540)||(7848-7887)
[»] scaffold0595 (1 HSPs)
scaffold0595 (502-540)||(344-382)
[»] scaffold0122 (1 HSPs)
scaffold0122 (506-540)||(15687-15721)
[»] scaffold0882 (1 HSPs)
scaffold0882 (507-540)||(3788-3821)
[»] scaffold0067 (1 HSPs)
scaffold0067 (503-540)||(34819-34855)
[»] scaffold0633 (1 HSPs)
scaffold0633 (508-540)||(3886-3918)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 35300564 - 35300326
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  35300564 ttgtagcaagccctaccattactagaatgtttagcttttcctgcggatttacctgcggatttttgtgtaaattccgcaggaaatgtatttcctgcagatt 35300465  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  35300464 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaagaaggaagtaacgtttt 35300365  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  35300364 acgataaatttttttcccaagctctataaaattcctggc 35300326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 190 - 391
Target Start/End: Complemental strand, 23704570 - 23704369
Alignment:
Q  190 tttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatat 289  Q
    |||| ||||||||||||||| ||||||||||||||||||||  | |||    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23704570 ttttcctgcggatttacctgtggatttttgtgtaaattccgccgaaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatat 23704471  T
Q  290 ccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcc 389  Q
    ||||||||||||||||  |||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||  |||  ||||||||||||||    
T  23704470 ccgtaggaaatgtgaaattatctgcaggaaatgtaaaattattcgcaagaaagaagtaacgttttacgataaattttttatccaaactctataaaattcc 23704371  T
Q  390 tg 391  Q
    ||    
T  23704370 tg 23704369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 155 - 391
Target Start/End: Complemental strand, 26723074 - 26722859
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||  || || |||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||    |||||||||||||    
T  26723074 ttgtagcaaatccaaccattactagaaattttagcttttcctacggatttacctgcggatttttatgtaaattccgcaggaaacacatttcctgcagatt 26722975  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||  ||||||||||||||||||||||||||||||||||| |||||||                     ||||||||||| |||||||||||||||||||    
T  26722974 ttgtcaaggatttaggttccgcaggaaagatatatccgtaagaaatgt---------------------gaaattattcgcaggaaggaagtaacgtttt 26722896  T
Q  355 acgataaattttttgcccaggctctataaaattcctg 391  Q
     |||||||||||||||||| |||||||||||||||||    
T  26722895 gcgataaattttttgcccaagctctataaaattcctg 26722859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 155 - 387
Target Start/End: Complemental strand, 7873344 - 7873124
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    |||||||||||||    
T  7873344 ttgtagcaagcccaaccattactagaacttttagctttttctgcggatttacctgcgggtttttatgtaaattccgcaggaaacacatttcctgcagatt 7873245  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  ||||||    | | ||     ||||   |||  | ||||||||||  |||| |||||||||||||||||||| |  ||||||||||||| ||||    
T  7873244 ttgcctaggatt----tcctgc-----agat---tccacatgaaatgtgaaattatccgcaggaaatgtgaaattattagcgggaaggaagtaacatttt 7873157  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| |||||||||||| ||||||||||||    
T  7873156 gcgataatttttttgcccagactctataaaatt 7873124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 4843432 - 4843532
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| || |||||||||||||    
T  4843432 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaagaagtaacgttttgcgataaattttttgctcaagctctataaaatt 4843531  T
Q  388 c 388  Q
    |    
T  4843532 c 4843532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 3012289 - 3012408
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || |||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||| ||||||     ||||||||||||    
T  3012289 ttgtagcaagcccaaccattactagaacttttagcttttcctgcggatttacctgccgatttttgtgtacattccgcaggaaacacacttcctgcagatt 3012388  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| |||||| ||||||||    
T  3012389 ttgccaaggatataggttcc 3012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 387
Target Start/End: Complemental strand, 22206810 - 22206590
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||    ||||||| |||||||||||||| |||||||||||||| ||  | ||| ||||||||||| ||||||    |||||||||||||    
T  22206810 ttgtagcaagcccaggcattactataatttttagcttttcctgcggatttacctacgagtgtttatgtaaattccgcaggaaacacatttcctgcagatt 22206711  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    || || |||||||     | ||||       || |||| |||||||||||   |||| |||||||||||||||||||||| |||||||||||||| ||||    
T  22206710 ttacttaggatttc----ctgcag-------at-tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacatttt 22206623  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| ||| |||||||||||||||||||||    
T  22206622 gcgataattttcttgcccaggctctataaaatt 22206590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 387
Target Start/End: Original strand, 22227929 - 22228149
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||    ||||||| |||||||||||||| |||||||||||||| ||  | ||| ||||||||||| ||||||    |||||||||||||    
T  22227929 ttgtagcaagcccaggcattactataatttttagcttttcctgcggatttacctacgagtgtttatgtaaattccgcaggaaacacatttcctgcagatt 22228028  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    || || |||||||     | ||||       || |||| |||||||||||   |||| |||||||||||||||||||||| |||||||||||||| ||||    
T  22228029 ttacttaggatttc----ctgcag-------at-tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacatttt 22228116  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| ||| |||||||||||||||||||||    
T  22228117 gcgataattttcttgcccaggctctataaaatt 22228149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 21932746 - 21932642
Alignment:
Q  287 tatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    |||||| ||||||| | ||  |||||||||||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||| |||||||||||    
T  21932746 tatccgcaggaaatataaaattatctgcaggaaatatgaaattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaat 21932647  T
Q  387 tcctg 391  Q
    |||||    
T  21932646 tcctg 21932642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 387
Target Start/End: Complemental strand, 5991541 - 5991324
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| |||||| |||| ||||||||||||||||||   ||| ||||||||||| ||||||    |||||||||||||    
T  5991541 ttgtagcaagcccagccattactagaacttttagtttttcctgcggatttacctgcgg---tttatgtaaattccgcaggaaacacatttcctgcagatt 5991445  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     | ||||       || || | ||||||||||||  |||| ||| ||||||| |||||||||| |||||||||||||| ||||    
T  5991444 ttgcctaggatttc----ctgcag-------at-tctgcaggaaatgtgaaattatccgcaagaaatgtaaaattattcgcaggaaggaagtaacatttt 5991357  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| |||||||||||||||||||||||||    
T  5991356 gcgataatttttttgcccaggctctataaaatt 5991324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 28693979 - 28693901
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||| || |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  28693979 aggaaatgtgaaattattcgcagaaaggaagtaaagttttgcgataatttttttgcccaggctctataaaattcctggc 28693901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 41759744 - 41759624
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| |||||||||||  ||| ||||||| || ||||||| |||||||||||| ||||||    |||||||||||||    
T  41759744 ttgtagcaagcccagccattactagaacttttagcttttcttgcagatttacttgtggattttggtgtaaattccgcaggaaacacatttcctgcagatt 41759645  T
Q  255 ttgctaaggatttaggttccg 275  Q
    |||| ||||||||||||||||    
T  41759644 ttgccaaggatttaggttccg 41759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 3012454 - 3012539
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||| |||||||||||| |||||    
T  3012454 tatccgcaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataatttttttgcccagactctataaaatttctggc 3012539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 25688189 - 25688109
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||||| |||||| |||||||||||||||||| |||||    
T  25688189 gcaggaaatgtgaaattattcacagaaaggaagtaacattttacgataatttttttacccaggctctataaaatttctggc 25688109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 19377391 - 19377490
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    |||||||| | ||||| |||||  ||| ||||||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  19377391 attactagtagttttaacttttcttgcagatttacctgcggatgtttgtggaaattccgaaggaaatacatttcctgcagattttgccaaggatttaggt 19377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 41759596 - 41759525
Alignment:
Q  322 gtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||    
T  41759596 gtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgcccagactctataaaattcttggc 41759525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 814956 - 814871
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| |||| ||||||||||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| ||||||||||    
T  814956 tatccgcagaaaatgtgaaattattagcaggaatgaagtaacgttttgcgataatttttttgcccagactctatataattcctggc 814871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 42439535 - 42439466
Alignment:
Q  318 aaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| | ||||||||||    
T  42439535 aaatgtgaaattattcgtagaaaagaagtaacgttttgcgataaattttttgcccagaccctataaaatt 42439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 272 - 391
Target Start/End: Original strand, 21688244 - 21688364
Alignment:
Q  272 tccgcaggaaagatatatccgtaggaaa-tgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgc 370  Q
    |||||||||||||||||||||||  ||| ||||||  ||||||||||||||||||||||||||  || |  | |||||| ||||  ||||||||||||||    
T  21688244 tccgcaggaaagatatatccgtattaaaatgtgaaattatctgcaggaaatgtgaaattattcacagaatagcagtaacattttgtgataaattttttgc 21688343  T
Q  371 ccaggctctataaaattcctg 391  Q
    | ||  |||||||||||||||    
T  21688344 ctagattctataaaattcctg 21688364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 38129082 - 38129010
Alignment:
Q  202 tttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||||||||| ||||||||    ||||||||| ||||||| |||||||||||||||    
T  38129082 tttacctgcggatttttgtgtaaattctgaaggaaacacatttcctgcatattttgccaaggatttaggttcc 38129010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 4843304 - 4843402
Alignment:
Q  176 ctagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||| ||||||||||| || ||||||||||| ||||| |||||||| |||||| | ||||    |||| |||||||||||| |||||||||||||||    
T  4843304 ctagaacttttagcttttccttcggatttacctacggatatttgtgtacattccgcatgaaacacatttcatgcagattttgccaaggatttaggttcc 4843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 19377523 - 19377629
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    ||||| ||||||||||||  |||| |||||||| |||||||||||||| ||||| ||  |||| |||| |||||| |||||||||||| ||||||| |||    
T  19377523 atccgcaggaaatgtgaaattatccgcaggaaaatgtgaaattattcgcaggaaagacataacattttgcgataatttttttgcccagactctatataat 19377622  T
Q  387 tcctggc 393  Q
    || ||||    
T  19377623 tcttggc 19377629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 21688145 - 21688211
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggtt 272  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||    
T  21688145 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgcgaaggatttaggtt 21688211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 25688314 - 25688202
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||| |  | ||||||| || ||||||||||| |||| |||||||||||  || ||| ||||||||||| ||||||  | |||||||||||||    
T  25688314 ttgtagcaagctcagccattactaaaacttttagcttttcctgcagatttacctgcaaatgtttatgtaaattccgcaggaaacatatttcctgcagatt 25688215  T
Q  255 ttgctaaggattt 267  Q
    ||||  |||||||    
T  25688214 ttgcctaggattt 25688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 28694133 - 28694057
Alignment:
Q  198 cggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||||| |||||||||||||||||||||| | ||||||    |||||||||||||||||  ||||||||||||||    
T  28694133 cggatttagctgcggatttttgtgtaaattctgcaggaaacacatttcctgcagattttgcccaggatttaggttcc 28694057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 30852447 - 30852527
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||| |||||||||| ||| |||| |||||| |||||| |||||  |||| |||||| |||||    
T  30852447 gcaggaaatgtgaaattattcgcaggaaggaagcaacattttgcgataatttttttccccagattctaaaaaatttctggc 30852527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 2354926 - 2354888
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2354926 atccagaagtcctagctcaactggcaaaatgccgaaatt 2354888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 3497646 - 3497608
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3497646 atccagaagtcctagctcaactggcaaaatgccgaaatt 3497608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4887642 - 4887604
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4887642 atccagaagtcctagctcaactggcaaaatgccgaaatt 4887604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 19306711 - 19306749
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19306711 atccagaagtcctagctcaactggcaaaatgccgaaatt 19306749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 35157213 - 35157175
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35157213 atccagaagtcctagctcaactggcaaaatgccgaaatt 35157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 45236929 - 45236967
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45236929 atccagaagtcctagctcaactggcaaaatgccgaaatt 45236967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 48612516 - 48612554
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48612516 atccagaagtcctagctcaactggcaaaatgccgaaatt 48612554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 48729813 - 48729775
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48729813 atccagaagtcctagctcaactggcaaaatgccgaaatt 48729775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 27396442 - 27396405
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27396442 tccagaagtcctagctcaactggcaaaatgccgaaatt 27396405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 393
Target Start/End: Complemental strand, 38128960 - 38128879
Alignment:
Q  312 tgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||  | ||||||||| ||||||||| ||||||| |||||||| ||  | ||||||||| |||||    
T  38128960 tgcaggaaatgtgaaattatctgcaggaaggaaataacgttttgcgataaaatttttgcctagattttataaaatttctggc 38128879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 38991153 - 38991076
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctgg 392  Q
    ||||||| |||||||||||| |||||| |  ||||||||| |||||| ||||||| || | |||||||||||||||||    
T  38991153 aggaaatatgaaattattcgcaggaagaagataacgttttgcgataacttttttgtccggactctataaaattcctgg 38991076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 38991245 - 38991173
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcag 278  Q
    ||||||||||||||| |||||||||  |||||    ||||||||||||||||| ||||||||||| |||||||    
T  38991245 cctgcggatttttgtataaattccgttggaaacacatttcctgcagattttgccaaggatttaggatccgcag 38991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 501 - 537
Target Start/End: Original strand, 40809043 - 40809079
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaa 537  Q
    |||||||||||||||||||||||||||||||||||||    
T  40809043 catccagaagtcctagctcaactggcaaaatgccgaa 40809079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 537
Target Start/End: Original strand, 1323682 - 1323717
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaa 537  Q
    ||||||||||||||||||||||||||||||||||||    
T  1323682 atccagaagtcctagctcaactggcaaaatgccgaa 1323717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 4674435 - 4674400
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  4674435 cagaagtcctagctcaactggcaaaatgccgaaatt 4674400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 1573970 - 1573932
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1573970 atccagaagtcctagctcaactggtaaaatgccgaaatt 1573932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4106553 - 4106591
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4106553 atccagaagtcctagctcaactggtaaaatgccgaaatt 4106591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 6596541 - 6596579
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6596541 atccagaagtcctagctcaactggcaaaatgccaaaatt 6596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 9379990 - 9380028
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  9379990 atccagaagtcctagctcaactggcaaaatgtcgaaatt 9380028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 10061145 - 10061107
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  10061145 atccacaagtcctagctcaactggcaaaatgccgaaatt 10061107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 18944923 - 18944961
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18944923 atccagaagtcctagttcaactggcaaaatgccgaaatt 18944961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 29151582 - 29151620
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  29151582 atccagaagtcctagctcaactggcaaaatgctgaaatt 29151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 31300126 - 31300088
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  31300126 atccagaagtcctagctaaactggcaaaatgccgaaatt 31300088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 31717296 - 31717334
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31717296 atccagaagtcctagctcaactggtaaaatgccgaaatt 31717334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 32251464 - 32251426
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32251464 atccagaagtcctagttcaactggcaaaatgccgaaatt 32251426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 35849294 - 35849332
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  35849294 atccagaagtcctagctcaactggcaaagtgccgaaatt 35849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 36280050 - 36280016
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  36280050 agaagtcctagctcaactggcaaaatgccgaaatt 36280016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 45041862 - 45041824
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  45041862 atccagaagtcttagctcaactggcaaaatgccgaaatt 45041824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 536
Target Start/End: Original strand, 46416541 - 46416582
Alignment:
Q  495 acaaagcatccagaagtcctagctcaactggcaaaatgccga 536  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  46416541 acaaagaatccagaagtcctaggtcaactggcaaaatgccga 46416582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 815066 - 815002
Alignment:
Q  210 cggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||| || ||||   |||| |||||||||||| ||| |||||||||||    
T  815066 cggatttttgtgtaaattccgcagaaaatacatttcttgcagattttgccaagaatttaggttcc 815002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 3012432 - 3012472
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  3012432 tttaggatccgcaggaaagatatatccgcaggaaatgtgaa 3012472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 33512802 - 33512834
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||    
T  33512802 aagtcctagctcaactggcaaaatgccgaaatt 33512834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 42439663 - 42439591
Alignment:
Q  202 tttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||| || ||||||||||||| || ||||||    ||| ||||||||||||| |||||||||||||||    
T  42439663 tttacctgcagagttttgtgtaaatttcgcaggaaacacattttctgcagattttgccaaggatttaggttcc 42439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 2228210 - 2228171
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  2228210 catccagaagtcgtagctcaactggcaaaatgtcgaaatt 2228171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 7312579 - 7312544
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||| |||||    
T  7312579 cagaagtcctagctcaactggcaaaatgccaaaatt 7312544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 33628026 - 33628065
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  33628026 catccagaagtcctagctcaactgacaaagtgccgaaatt 33628065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 540
Target Start/End: Complemental strand, 37410836 - 37410793
Alignment:
Q  497 aaagcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||    
T  37410836 aaagtatctagaagtcttagctcaactggcaaaatgccgaaatt 37410793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 788975 - 788937
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  788975 atccagaagccctagctcaactgacaaaatgccgaaatt 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4069245 - 4069207
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  4069245 atccagaagtcctaactcaactggcaaaataccgaaatt 4069207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 5222702 - 5222664
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  5222702 atccagaagtcctaactcaactggtaaaatgccgaaatt 5222664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 17895633 - 17895671
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  17895633 atcctgaagtcctagctcaactggcaaaatgctgaaatt 17895671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 20350261 - 20350299
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  20350261 atccagaagtcctaactcaattggcaaaatgccgaaatt 20350299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 29628509 - 29628475
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||||||||    
T  29628509 agaagtcctagctcaactggaaaaatgccgaaatt 29628475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 530
Target Start/End: Original strand, 33228692 - 33228726
Alignment:
Q  496 caaagcatccagaagtcctagctcaactggcaaaa 530  Q
    ||||| |||||||||||||||||||||||||||||    
T  33228692 caaagaatccagaagtcctagctcaactggcaaaa 33228726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 38128986 - 38128932
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaa 319  Q
    |||||| ||||||||||||||||||  | ||||||||||||  ||||||||||||    
T  38128986 tttaggatccgcaggaaagatatatgtgcaggaaatgtgaaattatctgcaggaa 38128932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42557631 - 42557593
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  42557631 atccataagtcctagctcaattggcaaaatgccgaaatt 42557593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 47182802 - 47182840
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  47182802 atccataagtcctagctcaactggcaaaatgccaaaatt 47182840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 532
Target Start/End: Complemental strand, 47584800 - 47584770
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatg 532  Q
    |||||||||||||||||||||||||||||||    
T  47584800 atccagaagtcctagctcaactggcaaaatg 47584770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 6384646 - 6384609
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  6384646 tccagaagtcctagctcaactggtaaaataccgaaatt 6384609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 540
Target Start/End: Complemental strand, 10704011 - 10703982
Alignment:
Q  511 tcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||    
T  10704011 tcctagctcaactggcaaaatgccgaaatt 10703982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 19400251 - 19400288
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  19400251 cgataaactttttgcccaggctctataaaatttctggc 19400288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 27387212 - 27387175
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  27387212 cgataaattttttgcccaggctctatgaaatttctggc 27387175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 38575174 - 38575137
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  38575174 cgataaattttttgctcaggctctatgaaattcctggc 38575137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 41862329 - 41862244
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| |||||||||||  |||||| || || || ||||||  ||||| ||||||||||||| | |||  |||||||||||||||||    
T  41862329 tatccgcaggaaatgtataattatccgcagaaatgaagtattgttttgcgataaattttttactcagattctataaaattcctggc 41862244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 5850729 - 5850785
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattc 228  Q
    |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||||||||    
T  5850729 attactagaagttttaacttttcctgcggatttatctgcagaatgttgtgtaaattc 5850785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 13769746 - 13769714
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||    
T  13769746 aagtcctagctcaattggcaaaatgccgaaatt 13769714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 21226070 - 21226102
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| ||||||||||||||||||||||||    
T  21226070 aagtcctatctcaactggcaaaatgccgaaatt 21226102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 21932854 - 21932798
Alignment:
Q  216 tttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggtt 272  Q
    ||||||||||||||| ||||||    ||||||||||||||||  |||||||||||||    
T  21932854 tttgtgtaaattccgcaggaaacacatttcctgcagattttgtcaaggatttaggtt 21932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 155 - 391
Target Start/End: Original strand, 15528926 - 15529162
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  15528926 ttgtagcaagccctaccattattagaatttttagcttttcctgcggatttacctgcggatgtttgtgtaaattccgcaggaaatgtatttcctgcagatt 15529025  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15529026 ttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaagaagtaatgtttt 15529125  T
Q  355 acgataaattttttgcccaggctctataaaattcctg 391  Q
     |||||||||||||||| |||||||||||||||||||    
T  15529126 gcgataaattttttgcctaggctctataaaattcctg 15529162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 9696035 - 9696273
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| |  |||| |||||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||  | |||||||||||||    
T  9696035 ttgtagcaagcccaatcattattagaatttttagattttcctgcggatttacctgcagatttttgtgtaaattccgcaggaaacatatttcctgcagatt 9696134  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9696135 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtttt 9696234  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||| |||||||||||| |||||    
T  9696235 gcgataaattttttgcccagactctataaaatttctggc 9696273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 181 - 400
Target Start/End: Original strand, 2941228 - 2941447
Alignment:
Q  181 atttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcagga 280  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||| || ||||||    ||||||||||||||||| |||||||||||||||||| ||    
T  2941228 atttttatcttttcctgcggatttacctgcggattttagtgtaaatttcgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcatga 2941327  T
Q  281 aagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctcta 380  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2941328 aagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctcta 2941427  T
Q  381 taaaattcctggcaccacca 400  Q
    ||||||||||||| ||||||    
T  2941428 taaaattcctggctccacca 2941447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 155 - 391
Target Start/End: Original strand, 15122023 - 15122259
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||| || |||||  |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||    |||||||||||||    
T  15122023 ttgtagaaaaccctatcattattagaatttttagctttttctgcggatttacctgcggatttgtgtctaaattctgcaggaaacacatttcctgcagatt 15122122  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||| || ||| ||||||||||||    
T  15122123 ttgccaaggatttacgttccgcaggaaagatatatccgtaggaaatgtaaaattatctgcagaaaatgtgaaattattcgcagaaagaaagtaacgtttt 15122222  T
Q  355 acgataaattttttgcccaggctctataaaattcctg 391  Q
     ||||||||||||||||||  ||||||||||||||||    
T  15122223 gcgataaattttttgcccaaactctataaaattcctg 15122259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 9047051 - 9046813
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||| ||| || || |||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||| ||||||    |||||||||||||    
T  9047051 ttgtagtaagtccaaccattactagaatttttagcttttcctgcggatttacctgtagatttttgtgtagattccgcaggaaacacatttcctgcagatt 9046952  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||  |||||||||||||||||| |||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||||    
T  9046951 ttgtcaaggatttaggttccgcaagaaatatatatctgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcaaaggaaggaaataacgtttt 9046852  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||  |||||||||||| |||||    
T  9046851 ccgataaattttttgcccaaactctataaaatttctggc 9046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 155 - 388
Target Start/End: Complemental strand, 34249137 - 34248916
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||||||||||||||||||||            ||||||||||||||||||||||| | ||||||    |||||||||||||    
T  34249137 ttgtagcaagcccaaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattctgcaggaaacacatttcctgcagatt 34249050  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||| |||||||||| |||||||||||||||||||| |||| ||||  |||||||||||||||||||||||| || |||||||||||||||||||    
T  34249049 ttgccaagggtttaggttccacaggaaagatatatccgtagaaaatatgaaattatctgcaggaaatgtgaaattatccgcaggaaggaagtaacgtttt 34248950  T
Q  355 acgataaattttttgcccaggctctataaaattc 388  Q
     |||||||||||||||||||||||||||||||||    
T  34248949 gcgataaattttttgcccaggctctataaaattc 34248916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 23663844 - 23663657
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||||| |||||| | ||||||||||||||||| |||||||||    
T  23663844 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttatgttccgtaagaaagatatatccgtagaaaatgtgaa 23663745  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
      ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  23663744 attatctgcaggaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttatccaggctctataaaattcctggc 23663657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 10397811 - 10397708
Alignment:
Q  289 tccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattc 388  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  10397811 tccgtaggaaatgtgaaattatctgttggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattc 10397712  T
Q  389 ctgg 392  Q
    ||||    
T  10397711 ctgg 10397708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 31188338 - 31188210
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||||||||||||||||||  || |||| ||||  |||| | || ||||||||||||||||  ||||||||||||||||||| |||||| ||    
T  31188338 tttaggatccgcaggaaagatatatcctcagaaaatttgaaattatccgtagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataattt 31188239  T
Q  365 ttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||||| ||||    
T  31188238 ttttgcccaggctctataaaattcatggc 31188210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 2836193 - 2836066
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| |||||||||||  ||||||   ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| ||   |||||||    
T  2836193 tttaggatccgcaggaaaagtatatcgacaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtcttgtaataaatt 2836094  T
Q  365 ttttgcccaggctctataaaattcctgg 392  Q
    |||||| ||| |||||||||||||||||    
T  2836093 ttttgctcagactctataaaattcctgg 2836066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 1781107 - 1780941
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||| |||||||||||||||||||  ||||||    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||             
T  1781107 cctgtggatttttgtgtaaattcctcaggaaacacatttcctgcagattttgccaaggatttaggttccgcataaaagatatatccgtagg--------- 1781017  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
                ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  1781016 ------------aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaattcctggc 1780941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 2836336 - 2836217
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||| ||| || ||| |||||| ||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||   |||||||||||||    
T  2836336 ttgtagcaaacccaaccattcctagaacttttagctttttctgcggattgatctgcggattttcgtgtaaattccgcaggaaatacatttcctgcagatt 2836237  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||  |||||||||||||||    
T  2836236 ttgtcaaggatttaggttcc 2836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 289 - 400
Target Start/End: Complemental strand, 28614406 - 28614295
Alignment:
Q  289 tccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattc 388  Q
    |||||||||||||||||  |||| |||| ||||||||||||||||| |||||||||||||| |||| |||||| |||||||| ||||||||||||||||     
T  28614406 tccgtaggaaatgtgaaattatcagcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcacaggctctataaaattt 28614307  T
Q  389 ctggcaccacca 400  Q
    ||| | ||||||    
T  28614306 ctgcctccacca 28614295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 272 - 393
Target Start/End: Complemental strand, 31200176 - 31200054
Alignment:
Q  272 tccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttta-cgataaattttttgc 370  Q
    |||||||| |||||||||| | ||||||||||||  |||| |  | ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  31200176 tccgcaggtaagatatatctgcaggaaatgtgaaattatccgtggaaaatgtgaaattattcgcaggaaggaagtaacgttttagcgataatttttttgc 31200077  T
Q  371 ccaggctctataaaattcctggc 393  Q
    ||| |||||||||||||| ||||    
T  31200076 ccatgctctataaaattcatggc 31200054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 14938921 - 14938826
Alignment:
Q  292 gtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||| ||||||| |||| |||||| ||||||||||| |||||||||||||    
T  14938921 gtaggaaatgtgaaattatctgcaggaaatgtgaaattattcccaggaagaaagtaacattttgcgataatttttttgcccaagctctataaaatt 14938826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 34188911 - 34189027
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||| | ||  || |||||||||| ||| ||||||||||| ||||||||| ||||||    
T  34188911 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaagagagaggtaacgttttgcgacaaattttttgctcaggctctagaaaatt 34189010  T
Q  388 cctggcaccaccagtgc 404  Q
    |||||| || |||||||    
T  34189011 cctggctccgccagtgc 34189027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 339476 - 339550
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||||||||||||||||| | | |||||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  339476 gcaggaaatgtgaaattaattgcaggaaggaagtaacattttgcgataaattttttgcccaagctctataaaatt 339550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 2960794 - 2960890
Alignment:
Q  297 aaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||  |||| |||||||||||||||||||||| | |||||||||||| |||| | |||| ||||| || |||||||||||||||| |||||    
T  2960794 aaatgtgaaattatccgcaggaaatgtgaaattattcgcaagaaggaagtaacattttgcaataattttttcgctcaggctctataaaatttctggc 2960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 339366 - 339434
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||| |||||||||||||||||||| |||||||   ||||||||||||||| | |||||||||||||||    
T  339366 cctgtggatttttgtgtaaattccgtaggaaatacatttcctgcagattttaccaaggatttaggttcc 339434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 4083585 - 4083624
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4083585 catccagaagtcctagctcaactggcaaaatgccgaaatt 4083624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 2314728 - 2314690
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2314728 atccagaagtcctagctcaactggcaaaatgccgaaatt 2314690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 8448271 - 8448233
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8448271 atccagaagtcctagctcaactggcaaaatgccgaaatt 8448233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 8457075 - 8457037
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8457075 atccagaagtcctagctcaactggcaaaatgccgaaatt 8457037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 8939625 - 8939663
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8939625 atccagaagtcctagctcaactggcaaaatgccgaaatt 8939663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 10181044 - 10181082
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10181044 atccagaagtcctagctcaactggcaaaatgccgaaatt 10181082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 17534652 - 17534614
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17534652 atccagaagtcctagctcaactggcaaaatgccgaaatt 17534614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 31205312 - 31205274
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31205312 atccagaagtcctagctcaactggcaaaatgccgaaatt 31205274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 10397877 - 10397808
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccg 275  Q
    |||||||||| |||||||||||||| ||||||    ||||||||| ||||||| ||||||||||||||||    
T  10397877 cctgcggattgttgtgtaaattccgcaggaaacacatttcctgcatattttgccaaggatttaggttccg 10397808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 28614507 - 28614434
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattc 228  Q
    ||||||||||||   | |||||||||| ||||| ||||| || ||||||||||||||||||||| |||||||||    
T  28614507 ttgtagcaagcctagccattactagaacttttaacttttcctacggatttacctgcggatttttatgtaaattc 28614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Original strand, 26269242 - 26269282
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  26269242 gcatctagaagtcctagctcaactggcaaaatgccgaaatt 26269282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 1241597 - 1241632
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  1241597 cagaagtcctagctcaactggcaaaatgccgaaatt 1241632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 18861893 - 18861858
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  18861893 cagaagtcctagctcaactggcaaaatgccgaaatt 18861858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 32107961 - 32107926
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  32107961 cagaagtcctagctcaactggcaaaatgccgaaatt 32107926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 735444 - 735482
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  735444 atccagaagttctagctcaactggcaaaatgccgaaatt 735482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4480473 - 4480511
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  4480473 atccagaagtcctaactcaactggcaaaatgccgaaatt 4480511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 10263200 - 10263162
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10263200 atccagaagtcctagctcaactggcaaagtgccgaaatt 10263162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 13507439 - 13507401
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13507439 atccagaagtcctagctcaactgggaaaatgccgaaatt 13507401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 13540290 - 13540252
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  13540290 atccagaagtcctagctcaaatggcaaaatgccgaaatt 13540252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 15953233 - 15953271
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  15953233 atccagaagtcctagctcaactggtaaaatgccgaaatt 15953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 5603577 - 5603538
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  5603577 catccagaagttctagctcaactggaaaaatgccgaaatt 5603538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 7098804 - 7098843
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  7098804 catccagaagtcctagctcaactggtaaaatgtcgaaatt 7098843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 16244413 - 16244448
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||| |||||||||||||||||||||||    
T  16244413 cagaagtcctagatcaactggcaaaatgccgaaatt 16244448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 16496782 - 16496743
Alignment:
Q  502 atccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  16496782 atccagaagtcctagctcaactggcaaaaatgccgaaatt 16496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 21513074 - 21513109
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||| |||||||    
T  21513074 cagaagtcctagctcaactggcaaaatgtcgaaatt 21513109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4891007 - 4891045
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  4891007 atccagaagtcttagctcaactggaaaaatgccgaaatt 4891045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4996871 - 4996909
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  4996871 atccagaagtcctagctcaactgacaaaatgctgaaatt 4996909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 8329687 - 8329649
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  8329687 atccaaaagtcctagctcaactggcaatatgccgaaatt 8329649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 32643857 - 32643819
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  32643857 atccagaagtcctaactcaactggtaaaatgccgaaatt 32643819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 34188782 - 34188856
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattcc 229  Q
    |||||||||||||  | |||||||||| ||| | ||||| |||||||||||||| || || ||||| ||||||||    
T  34188782 ttgtagcaagcccagccattactagaactttcaacttttcctgcggatttacctacgaatgtttgtataaattcc 34188856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 4128945 - 4128982
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  4128945 tccagaagtcctagctcaactggtaaaataccgaaatt 4128982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 14727309 - 14727547
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| || || |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    |||||||||||||    
T  14727309 ttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggagttttgtgtaaattccgcaggaaacacatttcctgcagatt 14727408  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14727409 ttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtttt 14727508  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||| ||||||||||||||||||||||||| |||||    
T  14727509 gcgataatttttttgcccaggctctataaaatttctggc 14727547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 25007455 - 25007681
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  25007455 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaagaaatgtatttcctgcagatt 25007542  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25007543 ttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 25007642  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||||||||||||||||||||||    
T  25007643 gcgataaattttttgcccaggctctataaaattcctggc 25007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 37154075 - 37153888
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  37154075 cctgcggatttttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaa 37153976  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37153975 tttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggc 37153888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 44305403 - 44305629
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||| ||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44305403 ttgtaggaagccctacaattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaatgtatttcctgcagatt 44305490  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44305491 ttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 44305590  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||| |||||||||||||||||||||||||||||||    
T  44305591 gcgataatttttttgcccaggctctataaaattcctggc 44305629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 239 - 393
Target Start/End: Complemental strand, 1428471 - 1428317
Alignment:
Q  239 gtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtagg 338  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1428471 gtttttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcagaaaatgtgaaattattcgtagg 1428372  T
Q  339 aaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  1428371 aaggaagtaacgttttgcggtaaattttttgcccaggctctataaaattcctggc 1428317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 27584098 - 27583915
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27584098 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccccaggaaagatatatccgtaggaaatgtgaa 27583999  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
      ||||||||||||||||||||||||||    | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  27583998 attatctgcaggaaatgtgaaattattc----gcaggaagtaacgttttgcgataaattttttgctcaggctctataaaattcctggc 27583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 8239270 - 8239489
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaa--atgtttttcctgcaga 252  Q
    |||||| || |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||  || | |||||||||||    
T  8239270 ttgtagtaatccctaccattactagaatttttagcttttcctgcagatttacctgcggatttttgtgtaaattccgcaggaaatatatatttcctgcaga 8239369  T
Q  253 ttttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtt 352  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||                     |||||||||| ||||||||||||||||||    
T  8239370 ttttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcataggaaggaagtaacgtt 8239448  T
Q  353 ttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    || |||||||||||||||| ||| |||||||||||||||||    
T  8239449 ttgcgataaattttttgcctaggttctataaaattcctggc 8239489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 25011660 - 25011435
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||    ||| |||||||||    
T  25011660 ttgtagcaagcccaaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaacacattttctgcagatt 25011573  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||  |||||||||| | |||||||||||||||||    
T  25011572 ttgccaaggatttaggttccgcag-aaagatatatccgtaggaaatgtgaaattatctgcagaaaatgcaaaattattcgcatgaaggaagtaacgtttt 25011474  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||| ||||||||||||  ||||||||||| |||||    
T  25011473 gcgataatttttttgcccagattctataaaatttctggc 25011435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 158 - 393
Target Start/End: Complemental strand, 31844753 - 31844539
Alignment:
Q  158 tagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttg 257  Q
    |||||| ||| || |||||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||    ||||||||||||||||    
T  31844753 tagcaaacccaaccattactagaaattttagcttttcctacggatttacctgcagatttttgtgtaaattccgcaggaaacacatttcctgcagattttg 31844654  T
Q  258 ctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacg 357  Q
    | |||||||||||||||||||||||||||||||||||||||||||                     ||||||||||| |||||||||||||| |||| ||    
T  31844653 ccaaggatttaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacattttgcg 31844575  T
Q  358 ataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31844574 ataaattttttgcccagactctataaaattcctggc 31844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 6331682 - 6331815
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    |||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||    |||||| |||||||||| ||||||||||||    
T  6331682 attactagaaattttagcttttcctgcgggtttacctccggatttttgtgtaaattccgcaggaaacacatttcctacagattttgccaaggatttaggt 6331781  T
Q  272 tccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||||||||||||    
T  6331782 tccgcaggaaagatatatccgtaggaaatgtgaa 6331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 4642063 - 4641937
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||||||||||||||||||| ||||||| ||||  |||| |||||||||||||||||||||| ||||||||||||||||||| ||||  |||    
T  4642063 tttaggatccgcaggaaagatatatccgcaggaaatatgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgattgatt 4641964  T
Q  365 ttttgcccaggctctataaaattcctg 391  Q
    |||||| | ||||||||||||||||||    
T  4641963 ttttgcacgggctctataaaattcctg 4641937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 208 - 393
Target Start/End: Original strand, 27460728 - 27460895
Alignment:
Q  208 tgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatc 307  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||| ||||||||||||||||                 |||||||||||||      
T  27460728 tgcggatttttgtgtaaattccgaaggaaacacatttcctgcagattttgccaaggatttaggttccg-----------------taggaaatgtgaaat 27460810  T
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  27460811 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaatttttt-cccaggctctataaaattcttggc 27460895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 33468954 - 33468869
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33468954 tatctgtaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggc 33468869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 34459253 - 34459338
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  34459253 tatctgtaggaaatgtgaaattattcgtgggaaggaagtaacgttttgtgataaattttttgcccagactctataaaattcctggc 34459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 406
Target Start/End: Original strand, 4774085 - 4774202
Alignment:
Q  289 tccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattc 388  Q
    |||| ||||||||||||  |||| ||| |||||||||||||||||| |||||| ||||||| |||| |||||| |||||||||||| ||||||||||||     
T  4774085 tccgcaggaaatgtgaaattatccgcaagaaatgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaattt 4774184  T
Q  389 ctggcaccaccagtgccc 406  Q
    ||||| || ||| |||||    
T  4774185 ctggctccgccactgccc 4774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 6331804 - 6331881
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctgg 392  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  6331804 aggaaatgtgaaattatttgaaggaaggaagtaacgttttgcgataaattttttgctcatgctctataaaattcctgg 6331881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 24646185 - 24646265
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||| |||||||||||| | |||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||    
T  24646185 gcaggaaatttgaaattattcgcatgaaggaagtaacattttgagataatttttttgcccaggctctataaaattcctggc 24646265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 49898526 - 49898605
Alignment:
Q  314 caggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||| ||||||| |||| |||||    
T  49898526 caggaaatgtgaaattattcgcaggaaggacgtaacattttgcgataaattttttgcccagactctatataatttctggc 49898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 9527196 - 9527274
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||  |||||||||||| |||||    
T  9527196 aggaaatgtgaaattattcgcaggaagacagtaacgttttgcgataaattttttgcccatactctataaaatttctggc 9527274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 48940552 - 48940438
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||   | |||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||    |||| ||||||||    
T  48940552 ttgtagcaagccaagccattactagaacttttagcttttcctgcggatttatttgcggatttttgtgtaaattccgcaggaaacacatttcatgcagatt 48940453  T
Q  255 ttgctaaggatttag 269  Q
    |||  ||||||||||    
T  48940452 ttgtcaaggatttag 48940438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 24745408 - 24745508
Alignment:
Q  170 ctattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttag 269  Q
    |||||||||||||||||||||||  || |||||||||||| || ||||||||||||||| | ||||||    ||| ||||||||||||| ||||||||||    
T  24745408 ctattactagaatttttagcttt--ctacggatttacctgtggttttttgtgtaaattctgcaggaaacacattttctgcagattttgccaaggatttag 24745505  T
Q  270 gtt 272  Q
    |||    
T  24745506 gtt 24745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 313 - 403
Target Start/End: Original strand, 24745544 - 24745632
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggcaccaccagtg 403  Q
    |||||||||||||||||||||| | |||| ||||||| ||   |||||| |||||||||||| |||||||||||||||||| || ||||||    
T  24745544 gcaggaaatgtgaaattattcgcatgaagaaagtaacattg--cgataatttttttgcccagactctataaaattcctggctccgccagtg 24745632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 400
Target Start/End: Complemental strand, 44238853 - 44238736
Alignment:
Q  279 gaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctc 378  Q
    |||||||||||||| | ||||||||||  |||| ||||||||||||||| |||||    | | |||||||| ||||||||||||| |||| | ||| |||    
T  44238853 gaaagatatatccgcatgaaatgtgaaattatccgcaggaaatgtgaaaatattc----gcatgaagtaacattttacgataaatattttacacagactc 44238758  T
Q  379 tataaaattcctggcaccacca 400  Q
    ||||||||| ||| | ||||||    
T  44238757 tataaaatttctgactccacca 44238736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 6802067 - 6801988
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||||| |||||| || | | ||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  6802067 tatctgcaggaaatgtgcaattatccgcatgtaggaaataacgttttgcgataaattttttgtccaaactctataaaatt 6801988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 10635488 - 10635526
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10635488 atccagaagtcctagctcaactggcaaaatgccgaaatt 10635526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 19338307 - 19338269
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19338307 atccagaagtcctagctcaactggcaaaatgccgaaatt 19338269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 28999373 - 28999411
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28999373 atccagaagtcctagctcaactggcaaaatgccgaaatt 28999411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 29005089 - 29005127
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29005089 atccagaagtcctagctcaactggcaaaatgccgaaatt 29005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 40809342 - 40809304
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40809342 atccagaagtcctagctcaactggcaaaatgccgaaatt 40809304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 40958703 - 40958665
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40958703 atccagaagtcctagctcaactggcaaaatgccgaaatt 40958665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42631114 - 42631076
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42631114 atccagaagtcctagctcaactggcaaaatgccgaaatt 42631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 43676153 - 43676115
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43676153 atccagaagtcctagctcaactggcaaaatgccgaaatt 43676115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 48314166 - 48314204
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48314166 atccagaagtcctagctcaactggcaaaatgccgaaatt 48314204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 48391955 - 48391993
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48391955 atccagaagtcctagctcaactggcaaaatgccgaaatt 48391993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 24646083 - 24646151
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||| ||||||||||||| |||||| ||||||    ||||||||||||||||| |||||||||||||||    
T  24646083 cctgtggatttttgtgtacattccgtaggaaacacatttcctgcagattttgccaaggatttaggttcc 24646151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 33468999 - 33468951
Alignment:
Q  242 tttcctgcagattttgctaaggatttaggttccgcaggaaagatatatc 290  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  33468999 tttcctgcaaattttgtcaaggatttaggttccgcaggaaagatatatc 33468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 24119658 - 24119693
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  24119658 cagaagtcctagctcaactggcaaaatgccgaaatt 24119693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 49948239 - 49948278
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  49948239 catccagaagtcctagctcaactggcaaaatgtcgaaatt 49948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 5598300 - 5598338
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5598300 atccagaagtcctagctcaactggaaaaatgccgaaatt 5598338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 13555849 - 13555815
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  13555849 agaagtcctagctcaactggcaaaatgccgaaatt 13555815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 15906296 - 15906258
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15906296 atccagaagtcctagctcaactagcaaaatgccgaaatt 15906258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 17068151 - 17068189
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17068151 atccagaagtcctagctcaactggtaaaatgccgaaatt 17068189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 19279981 - 19279943
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19279981 atccagaagtcctagctcaactggtaaaatgccgaaatt 19279943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 25083248 - 25083210
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  25083248 atccagaagtcctagctcaactggcaaaatgctgaaatt 25083210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 35010718 - 35010680
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  35010718 atccagaagtcctagctcaactagcaaaatgccgaaatt 35010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 40685528 - 40685566
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40685528 atccagaagtcctagctcaactggcaaaatgtcgaaatt 40685566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 43086600 - 43086562
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  43086600 atccataagtcctagctcaactggcaaaatgccgaaatt 43086562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 49500860 - 49500898
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  49500860 atccacaagtcctagctcaactggcaaaatgccgaaatt 49500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 1428504 - 1428455
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    |||||||||||||||| ||||||||||||||||| |||| |||| |||||    
T  1428504 ttgtagcaagccctaccattactagaatttttagtttttcctgcagattt 1428455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 501 - 534
Target Start/End: Original strand, 14890285 - 14890318
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgcc 534  Q
    ||||||||||||||||||||||||||||||||||    
T  14890285 catccagaagtcctagctcaactggcaaaatgcc 14890318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 270452 - 270412
Alignment:
Q  501 catccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  270452 catccagaagtcctagctcaactggcaaaaatgccgaaatt 270412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 11647352 - 11647388
Alignment:
Q  364 tttttgcccaggctctataaaattcctggcaccacca 400  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11647352 tttttgcccaggctctataaaattcctggctccacca 11647388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 536
Target Start/End: Original strand, 3315796 - 3315827
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccga 536  Q
    ||||||||||||||||||||||||||||||||    
T  3315796 cagaagtcctagctcaactggcaaaatgccga 3315827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 11403171 - 11403206
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11403171 cagaagtcctagctcaactgggaaaatgccgaaatt 11403206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 26261423 - 26261384
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  26261423 catccacaagtcctagctcaactggaaaaatgccgaaatt 26261384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 536
Target Start/End: Complemental strand, 41445156 - 41445125
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccga 536  Q
    ||||||||||||||||||||||||||||||||    
T  41445156 cagaagtcctagctcaactggcaaaatgccga 41445125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 48731886 - 48731847
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  48731886 catctagaagtcctagctcaactgacaaaatgccgaaatt 48731847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 3840487 - 3840453
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||| |||||||    
T  3840487 agaagtcctagctcaactggcaaaatgtcgaaatt 3840453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4126574 - 4126612
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  4126574 atccagaagtcctagctcaactgacaaaatgcggaaatt 4126612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 5790061 - 5790095
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||| |||||||||||||||||||||    
T  5790061 agaagtcctagcttaactggcaaaatgccgaaatt 5790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 15952957 - 15952923
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||| |||||||||||||||||||||||||||    
T  15952957 agaagtcgtagctcaactggcaaaatgccgaaatt 15952923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 536
Target Start/End: Original strand, 18475108 - 18475142
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccga 536  Q
    |||||||||||||||||||||||||||||| ||||    
T  18475108 atccagaagtcctagctcaactggcaaaataccga 18475142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 27460687 - 27460725
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttt 193  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  27460687 ttgtagcaagcccaaccattactagaatttttagctttt 27460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 32880704 - 32880670
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| ||||||||||||||||||||||||    
T  32880704 agaagtcctaactcaactggcaaaatgccgaaatt 32880670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 34010093 - 34010131
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  34010093 atccagaagtcttagctcaactggcaaaatgtcgaaatt 34010131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 9527036 - 9527085
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    |||||||||||||  | |||||||||| ||||||||||| ||||||||||    
T  9527036 ttgtagcaagcccagccattactagaacttttagcttttcctgcggattt 9527085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 540
Target Start/End: Complemental strand, 20164193 - 20164164
Alignment:
Q  511 tcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||    
T  20164193 tcctagctcaactggcaaaatgccgaaatt 20164164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 15331185 - 15331153
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  15331185 aagtcctagctcaactggaaaaatgccgaaatt 15331153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 530
Target Start/End: Original strand, 39606399 - 39606431
Alignment:
Q  498 aagcatccagaagtcctagctcaactggcaaaa 530  Q
    ||||||| |||||||||||||||||||||||||    
T  39606399 aagcatctagaagtcctagctcaactggcaaaa 39606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 41651078 - 41651110
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  41651078 aagtcctagctcaactggtaaaatgccgaaatt 41651110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 101)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 35468881 - 35469120
Alignment:
Q  155 ttgtagcaagccctactattactagaattttt-agctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagat 253  Q
    ||||||||||||| || ||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||    ||||||||||||    
T  35468881 ttgtagcaagcccaaccattgctagaattttttagctttttctgcggatttttctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagat 35468980  T
Q  254 tttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttt 353  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||    
T  35468981 tttgccaaggatttaggttccgcaggaaagatatatccgtagaaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattt 35469080  T
Q  354 tacgataaattttttgcccaggctctataaaattcctggc 393  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  35469081 tgcgataaattttttgcccaggctctataaaattcctggc 35469120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 155 - 390
Target Start/End: Original strand, 15675292 - 15675527
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||| |||| ||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||    |||||||||||||    
T  15675292 ttgttgcaaacccaaccattactagaatttttaactttttctgcggatttacctgcggagttttgtgtaaattccgcaggaaacacatttcctgcagatt 15675391  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15675392 ttgccaaggatttaagttccgcaggaaagatatatccgaaggaaatgtgaaattatctacaggaaatgtgaaattattcgcaggaaggaagtaacgtttt 15675491  T
Q  355 acgataaattttttgcccaggctctataaaattcct 390  Q
     |||||||||||||||||||||||||||||||||||    
T  15675492 gcgataaattttttgcccaggctctataaaattcct 15675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 155 - 390
Target Start/End: Original strand, 34443957 - 34444181
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||| ||||||||            ||||||||||||||| ||||||||| | ||||||  |||||||||||||    
T  34443957 ttgtagcaagccctaccattactagaatttgtagctttt------------cctgcggatttttgtctaaattccgcaagaaatgcatttcctgcagatt 34444044  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34444045 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 34444144  T
Q  355 acgataa-attttttgcccaggctctataaaattcct 390  Q
     ||||||  ||||||||||||||||| ||||||||||    
T  34444145 gcgataattttttttgcccaggctctctaaaattcct 34444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 155 - 400
Target Start/End: Original strand, 30248956 - 30249189
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||            |||||||||||||| ||||||    |||||||||||||    
T  30248956 ttgtagcaagcccaactattactagaatttttagctttttctgcggattt------------ttgtgtaaattccgcaggaaacacatttcctgcagatt 30249043  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| | |||||| ||| ||||||||    
T  30249044 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcagaaaatgtgaaattatttgcaggaagaaagcaacgtttt 30249143  T
Q  355 acgataaattttttgcccaggctctataaaattcctggcaccacca 400  Q
     ||||||||||||||||||| |||| ||||||||||||| ||||||    
T  30249144 gcgataaattttttgcccagactctgtaaaattcctggctccacca 30249189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 241 - 393
Target Start/End: Original strand, 2476430 - 2476582
Alignment:
Q  241 ttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaa 340  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2476430 ttttcctgcggattttatcaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaa 2476529  T
Q  341 ggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  2476530 ggaagtaacgttttgcgataaattttttgcccaggctctatataatttctggc 2476582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 241 - 393
Target Start/End: Complemental strand, 14832861 - 14832709
Alignment:
Q  241 ttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaa 340  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  14832861 ttttcctgtagattttgccaaggatttagattccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaa 14832762  T
Q  341 ggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||| |||||    
T  14832761 ggaagtaatgttttgcgataaattttttgcccagactctataaaatttctggc 14832709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 33006886 - 33007103
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||| ||| || ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    |||||||||||||    
T  33006886 ttgtagcaaacccaaccattactaaattttttagcttttcctgcggatttacctgcggatttttgtgtaaattccgtaggaaacacatttcctgcagatt 33006985  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||                     ||||||||||| |||||||||||||||||||    
T  33006986 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacgtttt 33007064  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||| ||||||||||||||||||    
T  33007065 gcgataaattttttgcccagactctataaaattcctggc 33007103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 34846346 - 34846563
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| |  || |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| || |||    |||||| ||||||    
T  34846346 ttgtagcaagtcaaaccattactagaatttttagcttatcctgcggatttacctccggatttttgtgtaaattccgcagtaaacacatttcctacagatt 34846445  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||                     ||||||||||| |||||||||||||||||||    
T  34846446 ttgccaaggatttaggttccgcatgaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacgtttt 34846524  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||||||||||| |||||||||||||||||||||||    
T  34846525 gcgataaattttttgtccaggctctataaaattcctggc 34846563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 387
Target Start/End: Complemental strand, 32953792 - 32953572
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| ||||||||||| || |||||||||||||  |||||| ||||||||||| ||||||    |||||||||||||    
T  32953792 ttgtagcaagcccagccattactagaacttttagcttttcctacggatttacctgcaaatttttatgtaaattccgtaggaaacacatttcctgcagatt 32953693  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     | ||||       || |||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  32953692 ttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgtaggaaggaagtaacatttt 32953605  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| |||||||| ||||||||||||||||    
T  32953604 gcgataacttttttgcacaggctctataaaatt 32953572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 15504038 - 15504166
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  15504038 tttaggatccgcgggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataaatt 15504137  T
Q  365 ttttgcccaggctctataaaattcctggc 393  Q
    ||||| | |||||||||| |||| |||||    
T  15504138 ttttgtcgaggctctatataatttctggc 15504166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 1672611 - 1672385
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||| ||| || |||||||||| ||||| | ||| ||||||||||||||||| |||||| |||| |||||| ||||||  | ||| |||||||||    
T  1672611 ttgtagcaatcccaaccattactagaacttttatcctttcctgcggatttacctgcgaatttttatgtacattccgcaggaaacatattttctgcagatt 1672512  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     ||     | ||||   ||| |||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  1672511 ttgcctaggattt-----cct----acagat---tccataggaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacatttt 1672424  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||| ||||||||||||||||||||||||| |||||    
T  1672423 gcgataatttttttgcccaggctctataaaatttctggc 1672385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 7162208 - 7161982
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | ||||||| || ||||||||||| ||||||||||||||| |||||||| ||||||||||  ||||||    |||||||||||||    
T  7162208 ttgtagcaagcccagccattactaaaaattttagcttttcctgcggatttacctgaggatttttatgtaaattccacaggaaacacatttcctgcagatt 7162109  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     | ||||       || |||| ||||||||||||  ||||  ||||||||||||||||||| | |||||||||||||| ||||    
T  7162108 ttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatccacaggaaatgtgaaattatttgcaggaaggaagtaacatttt 7162021  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||| ||||||||||||||||||||||||| |||||    
T  7162020 gcgataatttttttgcccaggctctataaaatttctggc 7161982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 16667618 - 16667499
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| ||  | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    |||||||||||||    
T  16667618 ttgtagcaagtccagccattactagaacttttagcttttcctgcggatttacctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagatt 16667519  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| |||||||||||||||    
T  16667518 ttgccaaggatttaggttcc 16667499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 43228767 - 43228541
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| ||||||||||| || ||||||||||||||||| ||| ||||||||||| ||||||    |||||||||||||    
T  43228767 ttgtagcaagcccagccattactagaacttttagcttttcctacggatttacctgcggatgtttatgtaaattccgcaggaaacacatttcctgcagatt 43228668  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     | ||||       || |||| ||||||||||||  |||||||| ||||| |||||||||||| ||||| | |||||| ||||    
T  43228667 ttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatctgcaagaaatatgaaattattcgcaggaaaggagtaacatttt 43228580  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||| | ||||||||||||||||||||||||| |||||    
T  43228579 gcgattagttttttgcccaggctctataaaatttctggc 43228541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 13942755 - 13942651
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| ||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  13942755 atccgcaggaaatgtgaat-tatccacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttacccaggctctataaaatt 13942657  T
Q  388 cctggc 393  Q
     |||||    
T  13942656 tctggc 13942651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 288 - 386
Target Start/End: Complemental strand, 12267385 - 12267288
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    ||||| ||||||||||||| |||| |||| ||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  12267385 atccgcaggaaatgtgaat-tatccgcagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataaactttttgcccaggctctataaaat 12267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 400
Target Start/End: Original strand, 21069153 - 21069245
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggcaccacca 400  Q
    |||||||||||||||||||||||||   ||||||||| ||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||    
T  21069153 tatctgcaggaaatgtgaaattatttccaggaaggaaataacgttttgcgataaattttttgcccagactctataaaatttctggctccacca 21069245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 368
Target Start/End: Original strand, 6900856 - 6900959
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||| ||||||||||||||| | ||||||||||  |||| |||||||||||||||||||||| | |||||||||||| |||| |||||||||    
T  6900856 tttaggatccgcgggaaagatatatccgcaagaaatgtgaaattatccgcaggaaatgtgaaattattcgcatgaaggaagtaacattttgcgataaatt 6900955  T
Q  365 tttt 368  Q
    ||||    
T  6900956 tttt 6900959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 17192794 - 17192675
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||| |  | |||||||||| |||||||| || ||||||||||||| |||||||||||||| ||||||| |||||||   |||||||||||||    
T  17192794 ttgtagcaagctcagccattactagaacttttagctcttcctgcggatttaccggcggatttttgtgtcaattccgcaggaaatacatttcctgcagatt 17192695  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||  |||||||||||||||    
T  17192694 ttgtcaaggatttaggttcc 17192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 21068988 - 21069107
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||| |||||| || |||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||| | ||||    |||||||||||||    
T  21068988 ttgtagtaagcccaaccattactagaatttttagcctttcctgcggatttacctgcgcatttttgtgtatattccgcaagaaacacatttcctgcagatt 21069087  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| || ||||||||||||    
T  21069088 ttgccaaagatttaggttcc 21069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 400
Target Start/End: Original strand, 37552051 - 37552138
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggcaccacca 400  Q
    |||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||||||||||||| ||||| ||||||    
T  37552051 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaatttctggctccacca 37552138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 400
Target Start/End: Original strand, 37654881 - 37654968
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggcaccacca 400  Q
    |||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||||||||||||| ||||| ||||||    
T  37654881 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaatttctggctccacca 37654968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 16567904 - 16568002
Alignment:
Q  289 tccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||| ||||||||||||  |||| |||||||||||||||||||||  |||||||||||||| |||| |||||| ||||||||||| |||||||||||||    
T  16567904 tccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcccaggaaggaagtaacattttgcgataatttttttgcccaagctctataaaatt 16568002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 288 - 390
Target Start/End: Complemental strand, 36234558 - 36234456
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||| | |||||||||||| |||| |||||||||||||| |||  ||||||||||||    
T  36234558 atccgcaggaaatgtgaaattatctgcaagaaatgtgaaattattcgcaagaaggaagtaacattttgcgataaattttttgtccaaactctataaaatt 36234459  T
Q  388 cct 390  Q
    |||    
T  36234458 cct 36234456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 37779780 - 37779854
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||| || |||||||||||||    
T  37779780 gcaggaaatgtgaaattattcgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatt 37779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 37607573 - 37607647
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||||||||||||||||||| |  ||||||||||||| ||||||||||| |||||||| || |||||||||||||    
T  37607573 gcaggaaatgtgaaattatttgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatt 37607647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 12267534 - 12267459
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccg 230  Q
    ||||||||||||   | |||||||||| ||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  12267534 ttgtagcaagcctagcaattactagaacttttagcttttcctgtggatttacctgcggatttttatgtaaattccg 12267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 37779672 - 37779757
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttg 257  Q
    |||||||||| |||||| |||||||||||||||||||||| || ||| ||||||||||| | ||||    ||||||||||||||||    
T  37779672 attactagaacttttagttttttctgcggatttacctgcgaatatttatgtaaattccgtatgaaacacatttcctgcagattttg 37779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 15503946 - 15504014
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||||| | ||||||    ||||||||||||||||| |||||||||||||||    
T  15503946 cctgcggatttttgtgtaaattctgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 15504014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 767416 - 767490
Alignment:
Q  294 aggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatttttt 368  Q
    ||||||||||||  |||| |||| ||||| ||||||||||| |||||| |||||||||||| | |||||||||||    
T  767416 aggaaatgtgaaattatccgcagaaaatgagaaattattcgcaggaagaaagtaacgttttgcaataaatttttt 767490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 1244310 - 1244272
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1244310 atccagaagtcctagctcaactggcaaaatgccgaaatt 1244272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 2103025 - 2103063
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2103025 atccagaagtcctagctcaactggcaaaatgccgaaatt 2103063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4164958 - 4164996
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4164958 atccagaagtcctagctcaactggcaaaatgccgaaatt 4164996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 6672240 - 6672278
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6672240 atccagaagtcctagctcaactggcaaaatgccgaaatt 6672278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 12708005 - 12707967
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12708005 atccagaagtcctagctcaactggcaaaatgccgaaatt 12707967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 12878247 - 12878209
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12878247 atccagaagtcctagctcaactggcaaaatgccgaaatt 12878209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 17869253 - 17869215
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17869253 atccagaagtcctagctcaactggcaaaatgccgaaatt 17869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 18473913 - 18473951
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18473913 atccagaagtcctagctcaactggcaaaatgccgaaatt 18473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23311302 - 23311264
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23311302 atccagaagtcctagctcaactggcaaaatgccgaaatt 23311264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 28143361 - 28143323
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28143361 atccagaagtcctagctcaactggcaaaatgccgaaatt 28143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 36569278 - 36569316
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36569278 atccagaagtcctagctcaactggcaaaatgccgaaatt 36569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 36726988 - 36727026
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36726988 atccagaagtcctagctcaactggcaaaatgccgaaatt 36727026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 41562457 - 41562495
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41562457 atccagaagtcctagctcaactggcaaaatgccgaaatt 41562495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 2476395 - 2476444
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  2476395 ttgtagcaagtcctaccattactagaatttttagcttttcctgcggattt 2476444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 9738367 - 9738436
Alignment:
Q  159 agcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattc 228  Q
    ||||||||| || |||||||||| || | || ||| |||||||||||||||| |||||||||||||||||    
T  9738367 agcaagcccaaccattactagaacttctcgcatttcctgcggatttacctgcagatttttgtgtaaattc 9738436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Complemental strand, 9054102 - 9054062
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  9054102 gcatccagaagtcctagctcaactggcaaaataccgaaatt 9054062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 37654794 - 37654878
Alignment:
Q  170 ctattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||| ||||| ||||| ||||||||||||||||| ||| || ||||||||||  ||||||    |||||||||||||    
T  37654794 ctattactagaacttttatcttttcctgcggatttacctgcgaattgttatgtaaattccataggaaacacatttcctgcagatt 37654878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 9902627 - 9902592
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  9902627 cagaagtcctagctcaactggcaaaatgccgaaatt 9902592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 16567782 - 16567885
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| ||  | |||||||||| |||||||||||  |||||||||||||||| ||| || |||||||| || ||||||    |||||| ||||||    
T  16567782 ttgtagcaagtccagccattactagaacttttagcttttcttgcggatttacctgcgaattgttatgtaaatttcgcaggaaacacatttcctacagatt 16567881  T
Q  255 ttgc 258  Q
    ||||    
T  16567882 ttgc 16567885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 29119608 - 29119643
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  29119608 cagaagtcctagctcaactggcaaaatgccgaaatt 29119643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 671188 - 671150
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  671188 atccagaagtcctagttcaactggcaaaatgccgaaatt 671150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 8214612 - 8214538
Alignment:
Q  318 aaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctgg 392  Q
    |||| |||||||||||| |||||| | ||||| ||||||||||| |||||| || ||||||| || |||||||||    
T  8214612 aaatatgaaattattcgcaggaagtacgtaacattttacgataatttttttaccaaggctctttataattcctgg 8214538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 22620780 - 22620742
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22620780 atccagaagtcctagctcaactgacaaaatgccgaaatt 22620742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 24443996 - 24443958
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  24443996 atccagaagtcctagctcaactggcaaaataccgaaatt 24443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 25328429 - 25328395
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  25328429 agaagtcctagctcaactggcaaaatgccgaaatt 25328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 26267130 - 26267092
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26267130 atccagaagtcgtagctcaactggcaaaatgccgaaatt 26267092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 34675746 - 34675784
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  34675746 atccagaagtcctagctcaacaggcaaaatgccgaaatt 34675784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 36136991 - 36136953
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  36136991 atccagaagtcctagctcaactagcaaaatgccgaaatt 36136953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 42068540 - 42068578
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  42068540 atccagaagtcctagctcagctggcaaaatgccgaaatt 42068578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42337972 - 42337934
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42337972 atccagaattcctagctcaactggcaaaatgccgaaatt 42337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 42448210 - 42448248
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42448210 atccagaagtcctagctcaactggcaaaatgtcgaaatt 42448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 2985868 - 2985909
Alignment:
Q  352 tttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  2985868 tttacgataaatttttcgcccaggctctatataattcctggc 2985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 767283 - 767380
Alignment:
Q  173 ttactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggtt 272  Q
    |||| |||| ||||||||||| |||||||||||    ||||||||||| ||||||||| ||||||    |||||| ||| |||||| |||||||||| ||    
T  767283 ttacaagaacttttagcttttcctgcggattta----cggatttttgtataaattccgcaggaaacacatttcctacaggttttgccaaggatttagatt 767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 540
Target Start/End: Original strand, 38682929 - 38682965
Alignment:
Q  504 ccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||    
T  38682929 ccagaagtcctagctcaactggcaaaatgccaaaatt 38682965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 40595962 - 40595994
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||    
T  40595962 aagtcctagctcaactggcaaaatgccgaaatt 40595994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 532
Target Start/End: Original strand, 6029610 - 6029641
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatg 532  Q
    ||||||||||||||||||||||||||||||||    
T  6029610 catccagaagtcctagctcaactggcaaaatg 6029641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 6041974 - 6041935
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  6041974 catccagaagtcctagctcaactggtaaaatgtcgaaatt 6041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 536
Target Start/End: Complemental strand, 9640664 - 9640629
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccga 536  Q
    |||||||||||| |||||||||||||||||||||||    
T  9640664 catccagaagtcatagctcaactggcaaaatgccga 9640629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 10393628 - 10393593
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10393628 cagaagtcctagctcaactggaaaaatgccgaaatt 10393593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 19836213 - 19836178
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||| |||||||    
T  19836213 cagaagtcctagctcaactggcaaaatgtcgaaatt 19836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 21728659 - 21728698
Alignment:
Q  502 atccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  21728659 atccagaagtcctagctcaactggcaaaaatgccgaaatt 21728698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23074774 - 23074735
Alignment:
Q  502 atccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  23074774 atccagaagtcctagctcaactggcaaaaatgccgaaatt 23074735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 540
Target Start/End: Original strand, 23310394 - 23310437
Alignment:
Q  497 aaagcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| |||||||||||||||||||||||||||||| || |||||    
T  23310394 aaagtatccagaagtcctagctcaactggcaaaataccaaaatt 23310437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 391
Target Start/End: Original strand, 25034988 - 25035023
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctg 391  Q
    |||||||||||||||||||||||||| |||||||||    
T  25034988 cgataaattttttgcccaggctctatgaaattcctg 25035023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 37607471 - 37607550
Alignment:
Q  178 agaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttg 257  Q
    |||| |||||| |||||||||||||||||||||  || ||| ||||||||||| | ||||    ||||||||||||||||    
T  37607471 agaacttttagttttttctgcggatttacctgcaaatatttatgtaaattccgtatgaaacacatttcctgcagattttg 37607550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 40045046 - 40045007
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  40045046 catccagaagttctagctcagctggcaaaatgccgaaatt 40045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 1269648 - 1269610
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  1269648 atccagaagtcctagctcaactgacaaaatgtcgaaatt 1269610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 1287314 - 1287352
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  1287314 atccagaagtcctagctcaattggtaaaatgccgaaatt 1287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 1650290 - 1650328
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  1650290 atccagaagtcctagctcaacctgcaaaatgccgaaatt 1650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 2706259 - 2706221
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  2706259 atccagaagtcctagcttaactggtaaaatgccgaaatt 2706221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4444976 - 4444939
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  4444976 atccagaagtcctagctcaactggc-aaatgccgaaatt 4444939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4617895 - 4617857
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  4617895 atccagaagtcctagctcaactggtaaaatgtcgaaatt 4617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 6053176 - 6053142
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||| |||||||||||||||    
T  6053176 agaagtcctagctcaactgacaaaatgccgaaatt 6053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 7179430 - 7179392
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  7179430 atccagaagttctagctcaactggcaaaatgtcgaaatt 7179392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 12665094 - 12665132
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12665094 atccagaagtcctagttcaactgacaaaatgccgaaatt 12665132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 12769254 - 12769216
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  12769254 atccaaaagtcctagctcaactggtaaaatgccgaaatt 12769216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 16496599 - 16496637
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  16496599 atccagaagtcctagttcaactggcaaaatgtcgaaatt 16496637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 18625744 - 18625706
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  18625744 atccagaagtcctaactcaactggcaaaatgccaaaatt 18625706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 24652443 - 24652405
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  24652443 atccagaagtcctaactcaactggcaaaatgtcgaaatt 24652405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 536
Target Start/End: Original strand, 33617095 - 33617129
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccga 536  Q
    |||||||||||||||||||||||| ||||||||||    
T  33617095 atccagaagtcctagctcaactggtaaaatgccga 33617129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 36185136 - 36185174
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  36185136 atccagaaatcctagctcaactggcaaaatgtcgaaatt 36185174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 37142155 - 37142117
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  37142155 atccagaagtcctagcttaactggcaaaatgctgaaatt 37142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 37940921 - 37940955
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||| |||||||    
T  37940921 agaagtcctagctcaactggcaaaatgtcgaaatt 37940955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 39143440 - 39143478
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  39143440 atccacaagtcctagctcaactggcaaaatgtcgaaatt 39143478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 39151055 - 39151017
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  39151055 atccagaagtcctagctcaactggtaaaatgtcgaaatt 39151017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 303
Target Start/End: Complemental strand, 39605847 - 39605809
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtg 303  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  39605847 tttaggatccgcaggaaagatatatccgcaggaaatgtg 39605809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 37551964 - 37552021
Alignment:
Q  170 ctattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaatt 227  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||| ||| || ||||||||    
T  37551964 ctattactagaacttttatcttttcctgcggagttacctgcgaattgttatgtaaatt 37552021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 13942889 - 13942833
Alignment:
Q  173 ttactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattcc 229  Q
    ||||||||| ||| ||||||| || | ||||||||||| |||||||||||| |||||    
T  13942889 ttactagaactttgagcttttcctaccgatttacctgcagatttttgtgtagattcc 13942833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 533
Target Start/End: Original strand, 24051401 - 24051433
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgc 533  Q
    ||||||||||||||| |||||||||||||||||    
T  24051401 catccagaagtcctaactcaactggcaaaatgc 24051433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 27004088 - 27004056
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  27004088 aagtcctagctcaactggtaaaatgccgaaatt 27004056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 29069633 - 29069665
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||    
T  29069633 aagtcctagctcaactggcaaaataccgaaatt 29069665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 2e-87; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 155 - 390
Target Start/End: Original strand, 4728538 - 4728773
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    |||||||||||||    
T  4728538 ttgtagcaagccaaaccattactagaatttttagcttttcctgcggatttacctgcggatttttgagtaaattccgcaggaaacacatttcctgcagatt 4728637  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  4728638 ttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcagaaaatgtgaaattatttgcaggaaggaagtaacgtttt 4728737  T
Q  355 acgataaattttttgcccaggctctataaaattcct 390  Q
     |||||||||||||||||||||||||||||||||||    
T  4728738 gcgataaattttttgcccaggctctataaaattcct 4728773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 4552177 - 4552403
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||||||||||||            ||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  4552177 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggatttgtgtgtaaattccgcaggaaatgtatttcctgcagatt 4552264  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4552265 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattatttgtaggaaggaagtaacgtttt 4552364  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||| ||||||||||||||||||    
T  4552365 gcgataaattttttgcccagactctataaaattcctggc 4552403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 2017561 - 2017335
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||| |||| ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  2017561 ttgtagcaagctctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaatgtatttcccgcagatt 2017474  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  2017473 ttgccaagtatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgtaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 2017374  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||||||||||||||||||| |||||||||||||||    
T  2017373 gcgataaattttttgcccaggctttataaaattcctggc 2017335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 46645583 - 46645821
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    |||| ||||||||    
T  46645583 ttgtagcaagcccaaccattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattctgcaggaaacacatttcatgcagatt 46645682  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||  ||||||||||||||||||||||||||||||| |||| ||||  ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  46645683 ttgccaagagtttaggttccgcaggaaagatatatccgtagaaaatatgaaattatatacaggaaatgtgaaattattcgcaggaaggaagtaacgtttt 46645782  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||| ||||| ||||||||||||||||||    
T  46645783 gcgataaatttttttcccagactctataaaattcctggc 46645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 10715686 - 10715874
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcc-tgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtga 304  Q
    ||||||||||||||||||||||||| ||||||    || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10715686 cctgcggatttttgtgtaaattccgcaggaaacacattgccctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtga 10715785  T
Q  305 atctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |  ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  10715786 aattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccaggctctataaaatacctggc 10715874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 10929456 - 10929644
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcc-tgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtga 304  Q
    ||||||||||||||||||||||||| ||||||    || || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10929456 cctgcggatttttgtgtaaattccgcaggaaacacattgccctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtga 10929555  T
Q  305 atctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |  ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  10929556 aattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccaggctctataaaatacctggc 10929644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 2576151 - 2576390
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||| |||||||||||||||||||||| |||||| |||| |||||||| ||||||||| ||||||    |||||||||||||    
T  2576151 ttgtagcaagcccaaccattacaagaatttttagctttttctgcgaatttacttgcgaatttttgtataaattccgcaggaaacacatttcctgcagatt 2576250  T
Q  255 tt-gctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttt 353  Q
    || || |||||| |||||||||||||||| ||||||||||||||||||| ||  ||||||||| |||| |||||||| ||| || |||||||||||||||    
T  2576251 tttgccaaggatgtaggttccgcaggaaatatatatccgtaggaaatgtaaaattatctgcagaaaatatgaaattaatcgcagaaaggaagtaacgttt 2576350  T
Q  354 tacgataaattttttgcccaggctctataaaattcctggc 393  Q
    | |||||| |||||||||||| || |||||||||| ||||    
T  2576351 tgcgataatttttttgcccagactttataaaattcttggc 2576390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 40969255 - 40969442
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||| | ||||||    ||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  40969255 cctgcggatttttgtgtaaattctgcaggaaacacattttctgcagattttgtcaatgatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 40969354  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
      ||||||||| |||| |||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  40969355 attatctgcagaaaatatgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattgctggc 40969442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 10058517 - 10058734
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||||||| ||||||    ||||| |||||||    
T  10058517 ttgtagcaagcccaaccattacgagaatttttagcttttcccgcggatttacctggggaattttgtgtaaattccgcaggaaacacatttccagcagatt 10058616  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    || | |||||||||||||||||||||||||||||||||||||||||||                     ||||||||||| |||||||||||||||||||    
T  10058617 ttaccaaggatttaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacgtttt 10058695  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||||||||||||||||||||||    
T  10058696 gcgataaattttttgcccaggctctataaaattcctggc 10058734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 270 - 388
Target Start/End: Original strand, 32005978 - 32006096
Alignment:
Q  270 gttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttg 369  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32005978 gttccgcaggaaagatatatccgtaggaaatgtgaatttatttgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttg 32006077  T
Q  370 cccaggctctataaaattc 388  Q
    ||||| |||||||||||||    
T  32006078 cccagactctataaaattc 32006096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 2521924 - 2521796
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||||||||||| ||||||| || ||||||||   |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2521924 tttaggatccgcaggaaagacatatccgcagaaaatgtgatattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttacgataaatt 2521825  T
Q  365 ttttgcccaggctctataaaattcctggc 393  Q
    ||||||||| | |||||||||||||||||    
T  2521824 ttttgcccatgttctataaaattcctggc 2521796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 31364166 - 31364332
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||       
T  31364166 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcagaaaagatatatccgtaggaaatgt--- 31364262  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
                      ||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  31364263 ------------------gaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccatgctctataaaatttctggc 31364332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 52373875 - 52373972
Alignment:
Q  296 gaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  52373875 gaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcacagactctataaaattcctggc 52373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 25237573 - 25237675
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||    
T  25237573 attactagaacttttagcgttttctgcggatttacctgcggaattttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 25237672  T
Q  272 tcc 274  Q
    |||    
T  25237673 tcc 25237675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 43003188 - 43003072
Alignment:
Q  287 tatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||||| | | |||||||||||| |||| |||||||||||    
T  43003188 tatcggtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaagaagtaacgttctgcaataaattttttgtccagactctataaaat 43003089  T
Q  387 tcctggcaccaccagtg 403  Q
    | ||||| || ||||||    
T  43003088 ttctggctccgccagtg 43003072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 1585777 - 1585864
Alignment:
Q  283 gatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgc 370  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||| |||||||| |||||| ||||||||    
T  1585777 gatatatccgtaggaaatgtaaatttatctgcaggaaatgtgaaattattcgtacgaagaaagcaacgttttgcgataatttttttgc 1585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 50099989 - 50100068
Alignment:
Q  294 aggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgccca 373  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  50099989 aggaaatgtgaaattatccgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttaccca 50100068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 11827024 - 11826946
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||    
T  11827024 aggaaatgtgaaattattcgcaggaaggaagtaacattttacgataatttttttgcctaggctctataaaatttctggc 11826946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 155 - 387
Target Start/End: Original strand, 9003548 - 9003767
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||    ||||| |||| ||||| |||||||| ||||||||||||||||||||  ||||||||||| ||||||    |||||||||||||    
T  9003548 ttgtagcaagcccagtcattacaagaacttttaactttttcttcggatttacctgcggatttta-tgtaaattccgcaggaaacacatttcctgcagatt 9003646  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||     | ||||       || |||| ||||||||||||  ||||   |||||||||||||||||||| | |||||||||||| ||||    
T  9003647 ttgcctaggatttc----ctgcag-------at-tccgcaggaaatgtgaaattatccataggaaatgtgaaattattcgcaagaaggaagtaacatttt 9003734  T
Q  355 acgataaattttttgcccaggctctataaaatt 387  Q
     |||||| ||||||| |||||||||||||||||    
T  9003735 gcgataatttttttgtccaggctctataaaatt 9003767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 41972420 - 41972340
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||  | |||||||||||||||    
T  41972420 gcagaaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgaccagattttataaaattcctggc 41972340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 14044337 - 14044449
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||   | ||||| | |||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||    |||||||||||||    
T  14044337 ttgtagcaagccaagccattacgaaaatttttagcttttcctgcggatttacctgcgaatttttatgtaaattccgcaggaaacacatttcctgcagatt 14044436  T
Q  255 ttgctaaggattt 267  Q
    ||||  |||||||    
T  14044437 ttgcctaggattt 14044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 25237721 - 25237803
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcct 390  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||  ||||||   |||||||| |||||||| |||||||    
T  25237721 tatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgtgataaaaaatttgcccatgctctatataattcct 25237803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 36947532 - 36947617
Alignment:
Q  189 ctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||||||| ||||||||||||||||||||| ||||||| | ||||||  | |||||||| |||||||| ||| |||||||||||    
T  36947532 ctttttctgctgatttacctgcggatttttgtataaattctgcaggaaacatatttcctgcggattttgccaagaatttaggttcc 36947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 50383987 - 50384091
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||||||   ||| ||||||| | | |||||||||| ||||||||||||||||||| | ||   |||||||||||||||||||||||||    
T  50383987 atccgtaggaaatgtgaaataatccgcaggaattataaaattattcgcaggaaggaagtaacgttttgcaat-ttttttttgcccaggctctataaaatt 50384085  T
Q  388 cctggc 393  Q
    | ||||    
T  50384086 cttggc 50384091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 14044462 - 14044542
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||  |||||||| ||||| |||| |||||| |||||||||||  |||||||||||| |||||    
T  14044462 gcaggaaatgtgaaattattctcaggaaggaggtaacattttgcgataatttttttgcccatactctataaaatttctggc 14044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 9694096 - 9694191
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    |||||||||| ||||| |||||||||||||||||  |||||| |||| ||||||||||| ||||||    |||||||||||||||||  |||||||    
T  9694096 attactagaacttttaactttttctgcggatttatttgcggaattttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 9694191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 288 - 382
Target Start/End: Original strand, 49745168 - 49745263
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctata 382  Q
    ||||| ||||||||||||  |||| |||| ||| ||| |||||||||| |||||||| ||||| |||||||||||||||||| ||||| |||||||    
T  49745168 atccgcaggaaatgtgaaattatccgcagaaaaatgtaaaattattcgcaggaaggacgtaacattttacgataaattttttccccagactctata 49745263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 50099872 - 50099939
Alignment:
Q  207 ctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||||||||||||||||||||| |||||||   ||| ||||| |||||||||||||||||||||||    
T  50099872 ctgcggatttttgtgtaaattccgtaggaaattcattttctgcaaattttgctaaggatttaggttcc 50099939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 2522049 - 2521948
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    |||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||    ||||||| |||||||   ||||||||||||    
T  2522049 attacttgaacttttagcttttcctg-ggatttacctgcggatttttgtgtaaagtccgcaggaaacacatttcctgtagattttatcaaggatttaggt 2521951  T
Q  272 tcc 274  Q
    |||    
T  2521950 tcc 2521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 31476951 - 31476865
Alignment:
Q  12 acatcatcaactgagtctagaagtaaaagcttttctaattcttctaccggagaatccatccaaactaaatcctttgaaagacttgaa 98  Q
    ||||||||||| ||||| | ||||||||||||||||||||||| |   ||||||||||||| ||||||||| ||||||  |||||||    
T  31476951 acatcatcaacagagtccaaaagtaaaagcttttctaattcttgtctaggagaatccatcccaactaaatcgtttgaagcacttgaa 31476865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 403
Target Start/End: Original strand, 32828281 - 32828371
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggcaccaccagtg 403  Q
    ||||||||||| |||||||| | |||||||||||||  ||||  ||||| |||||||||||||| |||||||||| ||||| || ||||||    
T  32828281 gcaggaaatgtaaaattatttgcaggaaggaagtaatattttgtgataatttttttgcccaggccctataaaatttctggctccgccagtg 32828371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 41972522 - 41972454
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||| |||||||    
T  41972522 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattaaggttcc 41972454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 11827133 - 11827078
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaatt 227  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  11827133 attactagaacttttagctttttctgcggatttacttgcagatttttatgtaaatt 11827078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 1982560 - 1982598
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1982560 atccagaagtcctagctcaactggcaaaatgccgaaatt 1982598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 3084371 - 3084333
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3084371 atccagaagtcctagctcaactggcaaaatgccgaaatt 3084333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 3848947 - 3848909
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3848947 atccagaagtcctagctcaactggcaaaatgccgaaatt 3848909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 5397069 - 5397031
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5397069 atccagaagtcctagctcaactggcaaaatgccgaaatt 5397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 9569474 - 9569512
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9569474 atccagaagtcctagctcaactggcaaaatgccgaaatt 9569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 12821164 - 12821202
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12821164 atccagaagtcctagctcaactggcaaaatgccgaaatt 12821202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23974771 - 23974733
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23974771 atccagaagtcctagctcaactggcaaaatgccgaaatt 23974733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 24712087 - 24712125
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24712087 atccagaagtcctagctcaactggcaaaatgccgaaatt 24712125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 30044713 - 30044675
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30044713 atccagaagtcctagctcaactggcaaaatgccgaaatt 30044675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42154267 - 42154229
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42154267 atccagaagtcctagctcaactggcaaaatgccgaaatt 42154229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 42856562 - 42856600
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42856562 atccagaagtcctagctcaactggcaaaatgccgaaatt 42856600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 46488246 - 46488208
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46488246 atccagaagtcctagctcaactggcaaaatgccgaaatt 46488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 49535884 - 49535922
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49535884 atccagaagtcctagctcaactggcaaaatgccgaaatt 49535922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 49882838 - 49882800
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49882838 atccagaagtcctagctcaactggcaaaatgccgaaatt 49882800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 1585701 - 1585750
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  1585701 ttgtagcaagccctaccattactagaatttttagcttttcctgcagattt 1585750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 32005906 - 32005955
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  32005906 ttgtagcaagccctaccattattagaatttttagcttttcctgcggattt 32005955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 9694204 - 9694282
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||| |||||||||| | ||||||| |||| |||| |||| |||||||||||||||||||| |||||| |||||    
T  9694204 gcaggaaatgtcaaattattcgcaagaaggaaataacattttgcgat-aattttttgcccaggctcta-aaaatttctggc 9694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 31929167 - 31929048
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| |  |||||||||||   | |||||| |||||||||||  ||||||||||  ||||||||| | | ||||    ||||||||| |||    
T  31929167 ttgtagcaagcccaatcattactagaatccctcgcttttcctgcggatttatttgcggattttattgtaaattctgcaagaaacacatttcctgcaaatt 31929068  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| |||||||||||||||    
T  31929067 ttgccaaggatttaggttcc 31929048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 35318538 - 35318577
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35318538 catccagaagtcctaactcaactggcaaaatgccgaaatt 35318577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 35828276 - 35828311
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  35828276 cagaagtcctagctcaactggcaaaatgccgaaatt 35828311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 1033574 - 1033540
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  1033574 agaagtcctagctcaactggcaaaatgccgaaatt 1033540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 1083507 - 1083545
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1083507 atccagaagtcctagttcaactggcaaaatgccgaaatt 1083545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 7512766 - 7512804
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  7512766 atccagaagtcctagctcaactggcaaaatgccaaaatt 7512804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 13389019 - 13389057
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  13389019 atccagaagtcctagctcaactggcaaaatgctgaaatt 13389057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 24550812 - 24550850
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  24550812 atccagaagtcttagctcaactggcaaaatgccgaaatt 24550850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 28010180 - 28010142
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28010180 atccagaagtcctagctcaactggcaaaatgccaaaatt 28010142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 29428054 - 29428092
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29428054 atccagaagtcctagctcaactggcaaaataccgaaatt 29428092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 29894409 - 29894447
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  29894409 atccagaagtcctagctcaactggcaaaatgtcgaaatt 29894447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 31263630 - 31263592
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  31263630 atccagaagtcctagctcaactggcaaaatgtcgaaatt 31263592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 47462161 - 47462127
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  47462161 agaagtcctagctcaactggcaaaatgccgaaatt 47462127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 49745076 - 49745138
Alignment:
Q  212 gatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||| ||||||    ||| ||||||||||||| |||||||||||||||    
T  49745076 gatttttgtgtaaattccgtaggaaacacattttctgcagattttgccaaggatttaggttcc 49745138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 54908017 - 54907983
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  54908017 agaagtcctagctcaactggcaaaatgccgaaatt 54907983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 6017108 - 6017157
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    ||||||||||||| ||||||||||||| || | |||||||||||||||||    
T  6017108 ttgtagcaagcccgactattactagaacttgtcgctttttctgcggattt 6017157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 37166142 - 37166175
Alignment:
Q  507 gaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||    
T  37166142 gaagtcctagctcaactggcaaaatgccgaaatt 37166175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 42412116 - 42412079
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| |||||||||||||||||||||||||||    
T  42412116 tccagaagtcatagctcaactggcaaaatgccgaaatt 42412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 4379305 - 4379344
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  4379305 catccagaagtcctagttcaactgacaaaatgccgaaatt 4379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 8901834 - 8901897
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttag 269  Q
    ||||| |||||||||||||| |||| ||||||    ||||||||||||||||| ||||||||||    
T  8901834 cctgcagatttttgtgtaaactccgcaggaaacacatttcctgcagattttgccaaggatttag 8901897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 18371344 - 18371383
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  18371344 catcaagaagttctagctcaactggcaaaatgccgaaatt 18371383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 537
Target Start/End: Original strand, 29648763 - 29648798
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaa 537  Q
    |||||||||||||||||||||| |||||||||||||    
T  29648763 atccagaagtcctagctcaactagcaaaatgccgaa 29648798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 33416706 - 33416671
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||| ||||||||    
T  33416706 cagaagtcctagctcaactggcaaaataccgaaatt 33416671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 37050703 - 37050738
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| |||||||||||||||||||||||||||    
T  37050703 cagaagtcttagctcaactggcaaaatgccgaaatt 37050738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 44171647 - 44171686
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  44171647 catccagaagtcctagctcaactagcaaaatgccaaaatt 44171686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 52373770 - 52373837
Alignment:
Q  207 ctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||| ||||||||||||||||||| || ||| || |||| |||||||||||  | |||||||||||||    
T  52373770 ctgcagatttttgtgtaaattccgcagaaaacgtatttcttgcagattttgtcagggatttaggttcc 52373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 3037236 - 3037274
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  3037236 atccagaaatcctagctcaactgtcaaaatgccgaaatt 3037274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 10758016 - 10757978
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  10758016 atccagaagtcctacctcaactgccaaaatgccgaaatt 10757978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 10971187 - 10971149
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  10971187 atccagaagtcctacctcaactgccaaaatgccgaaatt 10971149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 14285094 - 14285132
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  14285094 atccagaagtcctagctcaactgacaaaatgccaaaatt 14285132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 18813373 - 18813407
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| ||||||||||||||||||||||||    
T  18813373 agaagtcctaactcaactggcaaaatgccgaaatt 18813407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 21172878 - 21172916
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  21172878 atccagaagtcctggctcaactggtaaaatgccgaaatt 21172916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 26440966 - 26441004
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  26440966 atccaaaaatcctagctcaactggcaaaatgccgaaatt 26441004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 34684202 - 34684239
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  34684202 atccagaagtc-tagctcaactggcaaaatgccgaaatt 34684239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 36526270 - 36526232
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  36526270 atccagaagtcctagctcaactagcaaaaagccgaaatt 36526232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 36752358 - 36752396
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  36752358 atccagaagtcctaactcaactgacaaaatgccgaaatt 36752396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 50779920 - 50779882
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  50779920 atccagaagtcttagttcaactggcaaaatgccgaaatt 50779882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 17815270 - 17815233
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  17815270 tccacaagtcctagttcaactggcaaaatgccgaaatt 17815233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 25182781 - 25182744
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  25182781 cgataatttttttgcctaggctctataaaattcctggc 25182744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 26438291 - 26438250
Alignment:
Q  352 tttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||| |||||||||||||||||| ||||| ||||||||    
T  26438291 tttacgattaattttttgcccaggctccataaatttcctggc 26438250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 31034103 - 31034160
Alignment:
Q  42 ttttctaattcttctaccggagaatccatccaaactaaatcctttgaaagacttgaaa 99  Q
    ||||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||||    
T  31034103 ttttctaattcttctataagagaatcaatcccaactaaatcttttggaagacttgaaa 31034160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 41955227 - 41955324
Alignment:
Q  177 tagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||| |||| ||||||| |||||||||| ||  | ||||| |||||||||| | ||||||  | |||||| | ||||| || |||||||||||||||    
T  41955227 tagaactttttgctttttttgcggatttatctcagaattttggtgtaaattcagcaggaaacatgtttcctacggatttcgccaaggatttaggttcc 41955324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 42843981 - 42844018
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  42843981 cgataaatttttcgcccaggctctatagaattcctggc 42844018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 11673298 - 11673330
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||    
T  11673298 aagtcctagctcaactggcaaaataccgaaatt 11673330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 538
Target Start/End: Original strand, 12694522 - 12694558
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaa 538  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  12694522 atccagaagtcctagctcaactgacaaaatgctgaaa 12694558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 530
Target Start/End: Original strand, 13632088 - 13632116
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaa 530  Q
    |||||||||||||||||||||||||||||    
T  13632088 atccagaagtcctagctcaactggcaaaa 13632116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 24407502 - 24407534
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| |||||||    
T  24407502 aagtcctagctcaactggcaaaatgtcgaaatt 24407534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 28033197 - 28033229
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  28033197 aagtcctagctcaactggtaaaatgccgaaatt 28033229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 37913318 - 37913350
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  37913318 aagtcctagctcaactgggaaaatgccgaaatt 37913350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 530
Target Start/End: Complemental strand, 55853444 - 55853416
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaa 530  Q
    |||||||||||||||||||||||||||||    
T  55853444 atccagaagtcctagctcaactggcaaaa 55853416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 8e-87; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 3384155 - 3383917
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||| |||| || |||||    
T  3384155 ttgtagcaagtcctaccattattagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattctgcaaaaaatgtatttcatgtagatt 3384056  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3384055 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaacgtgaaattattcgtaggaaggaagtaacgtttt 3383956  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||| ||||||| || | ||||||||||| |||||    
T  3383955 gcgataaaatttttgctcatgttctataaaatttctggc 3383917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 155 - 393
Target Start/End: Complemental strand, 36406625 - 36406387
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| |  ||||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||    |||||||||||||    
T  36406625 ttgtagcaagcccaaacattactataatttttagcttttcctgtggatttacctgcggatatttgtgtaaattccgtaggaaacacatttcctgcagatt 36406526  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||    
T  36406525 ttgccaaggattgaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaagaaatgtgaaattattcgcaggaaggaagtaacgtttt 36406426  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||||||||||||||||||||||    
T  36406425 gcgataaattttttgcccaggctctataaaattcctggc 36406387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 28928089 - 28928277
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaa-tgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtga 304  Q
    |||||||| |||||||||||||||| ||||||    ||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  28928089 cctgcggagttttgtgtaaattccgcaggaaacacatttccctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtga 28928188  T
Q  305 atctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |  ||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  28928189 aattatctgcagaaaatgtgaaattattcgcaggaaggaagtaactttttacgataaattttttacccagactctttaaaattcctggc 28928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 24965024 - 24965229
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||    |||||||||||||    
T  24965024 ttgtagcaagcccaaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagatt 24965111  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    ||||  |||||||||||||||||||||||||||||                      ||||||||||||||||||||||| || ||| |||||| |||||    
T  24965112 ttgcctaggatttaggttccgcaggaaagatatatt---------------------tgcaggaaatgtgaaattattcgcagaaagaaagtaaggtttt 24965190  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||||||||||||||||||||||    
T  24965191 gcgataaattttttgcccaggctctataaaattcctggc 24965229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 35384348 - 35384263
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  35384348 tatctggaggaaatgtgaaattattcgtaggaaggaagtaccgttttgcgataaattttttgcccaagctctataaaattcctggc 35384263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 34282864 - 34282759
Alignment:
Q  287 tatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    |||||| | ||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  34282864 tatccgcatgaaatgtgaaattatttgcaggaaatgtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgtccaggctctataaaat 34282765  T
Q  387 tcctgg 392  Q
    | ||||    
T  34282764 ttctgg 34282759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 27321859 - 27321760
Alignment:
Q  294 aggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| |||||||  ||||||||| ||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||    
T  27321859 aggatatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggc 27321760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 13243073 - 13243192
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||| ||||| ||||||||||| |||| |||||| ||||||| |||||||||||||||| ||||||    ||||||| |||||    
T  13243073 ttgtagcaagcccagccattattagaacttttagcttttcctgcagatttatctgcggagttttgtgtaaattccgcaggaaacacatttcctgtagatt 13243172  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| |||||||||||||||    
T  13243173 ttgccaaggatttaggttcc 13243192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 13243242 - 13243345
Alignment:
Q  287 tatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    |||||| ||||||||||||  ||||| ||  ||||||||||||||| | | |||  |||||||||||||||||||||||||||| |||||||||||||||    
T  13243242 tatccgcaggaaatgtgaaattatctccacaaaatgtgaaattattggcaagaaaaaagtaacgttttacgataaattttttgctcaggctctataaaat 13243341  T
Q  387 tcct 390  Q
    ||||    
T  13243342 tcct 13243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 155 - 274
Target Start/End: Complemental strand, 39431798 - 39431679
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||| |||| | |||||| ||| |||||||||||  |||||||||||||||||| |||||||||||||||| ||||||    |||| ||||||||    
T  39431798 ttgtagcaaacccttcaattacttgaacttttagcttttcttgcggatttacctgcggagttttgtgtaaattccgtaggaaacacatttcgtgcagatt 39431699  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| || ||||||||||||    
T  39431698 ttgccaaagatttaggttcc 39431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 38214863 - 38214943
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||| ||||| |||||||| |||| |||||| ||||||||||| ||||||||||||| |||||    
T  38214863 gcaggaaatgtgaaattattcgcaggaatgaagtaacattttgcgataatttttttgcccaagctctataaaatttctggc 38214943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 8968355 - 8968435
Alignment:
Q  189 ctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||| |     ||||| |||||||| |||||||||||||||    
T  8968355 ctttttctgcggatttacctgcggatattggtgtaaattccgcaggaaacg-----cctgcggattttgccaaggatttaggttcc 8968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 8547260 - 8547221
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8547260 catccagaagtcctagctcaactggcaaaatgccgaaatt 8547221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 2733615 - 2733653
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2733615 atccagaagtcctagctcaactggcaaaatgccgaaatt 2733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 4312132 - 4312170
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4312132 atccagaagtcctagctcaactggcaaaatgccgaaatt 4312170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4430864 - 4430826
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4430864 atccagaagtcctagctcaactggcaaaatgccgaaatt 4430826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4977163 - 4977125
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4977163 atccagaagtcctagctcaactggcaaaatgccgaaatt 4977125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 6317299 - 6317337
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6317299 atccagaagtcctagctcaactggcaaaatgccgaaatt 6317337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 27928157 - 27928195
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27928157 atccagaagtcctagctcaactggcaaaatgccgaaatt 27928195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 34711684 - 34711646
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34711684 atccagaagtcctagctcaactggcaaaatgccgaaatt 34711646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 36586481 - 36586519
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36586481 atccagaagtcctagctcaactggcaaaatgccgaaatt 36586519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 38070610 - 38070572
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38070610 atccagaagtcctagctcaactggcaaaatgccgaaatt 38070572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Complemental strand, 11100419 - 11100379
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  11100419 gcatccagaagtcctagctcaactggaaaaatgccgaaatt 11100379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Original strand, 24654971 - 24655011
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  24654971 gcatccagaagtcctagctcaactggcaaaatgccaaaatt 24655011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 25213631 - 25213666
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  25213631 cagaagtcctagctcaactggcaaaatgccgaaatt 25213666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 26690696 - 26690731
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  26690696 cagaagtcctagctcaactggcaaaatgccgaaatt 26690731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 37295128 - 37295163
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  37295128 cagaagtcctagctcaactggcaaaatgccgaaatt 37295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 43820866 - 43820905
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43820866 catccagaagtcctaactcaactggcaaaatgccgaaatt 43820905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 3054023 - 3054061
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3054023 atccagaagttctagctcaactggcaaaatgccgaaatt 3054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 7772179 - 7772141
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7772179 atccagaagtcctagctcaactggtaaaatgccgaaatt 7772141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 13634845 - 13634883
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13634845 atccagaagtcttagctcaactggcaaaatgccgaaatt 13634883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 13735258 - 13735296
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13735258 atccagaagtcttagctcaactggcaaaatgccgaaatt 13735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 14188089 - 14188127
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  14188089 atccagaagtcctagctcaactggcaaaatgtcgaaatt 14188127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 19649627 - 19649589
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  19649627 atccagaagtcatagctcaactggcaaaatgccgaaatt 19649589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 25199045 - 25199083
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25199045 atccagaagtcctagctcaactggtaaaatgccgaaatt 25199083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 25250784 - 25250822
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  25250784 atccagaagtcctagctcaactggcaaaatgccaaaatt 25250822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 26737970 - 26738008
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26737970 atccagaagtcctagctcaactggtaaaatgccgaaatt 26738008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 33067517 - 33067479
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33067517 atccggaagtcctagctcaactggcaaaatgccgaaatt 33067479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 37708576 - 37708538
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  37708576 atccataagtcctagctcaactggcaaaatgccgaaatt 37708538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 38953609 - 38953571
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  38953609 atccagaagtcttagctcaactggcaaaatgccgaaatt 38953571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 44814866 - 44814900
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  44814866 agaagtcctagctcaactggcaaaatgccgaaatt 44814900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 31500948 - 31500854
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattta 268  Q
    ||||||| |||||||||||||||||| |||||||| ||||||  ||| ||||||||| | ||||||    |||||| | |||||||| |||||||||    
T  31500948 attactaaaatttttagctttttctgaggatttacttgcgga--tttatgtaaattctgcaggaaacacatttcctacggattttgccaaggattta 31500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 540
Target Start/End: Complemental strand, 6845110 - 6845074
Alignment:
Q  504 ccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||||||    
T  6845110 ccagaagtcctagctcaattggcaaaatgccgaaatt 6845074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 7432618 - 7432586
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||    
T  7432618 aagtcctagctcaactggcaaaatgccgaaatt 7432586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 540
Target Start/End: Original strand, 25893844 - 25893888
Alignment:
Q  496 caaagcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||    
T  25893844 caaaggattcagaagtcctagctcaactggcaaaatgctgaaatt 25893888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 39431647 - 39431591
Alignment:
Q  273 ccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaatt 329  Q
    ||||| |||||||||||||| | ||||||||||  ||||| ||||||||||||||||    
T  39431647 ccgcaagaaagatatatccgcatgaaatgtgaaattatctacaggaaatgtgaaatt 39431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 532
Target Start/End: Complemental strand, 10286595 - 10286564
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatg 532  Q
    ||||||||||||||||||||||||||||||||    
T  10286595 catccagaagtcctagctcaactggcaaaatg 10286564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 14243701 - 14243736
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||||||    
T  14243701 cagaagtcctagctcaactggtaaaatgccgaaatt 14243736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 26675559 - 26675594
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||||||    
T  26675559 cagaagtcctagctcaactggtaaaatgccgaaatt 26675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 34282980 - 34282913
Alignment:
Q  208 tgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccg 275  Q
    |||||||||| |||||||||| | ||||||    ||||||||||||||||| ||||||||| ||||||    
T  34282980 tgcggattttagtgtaaattctgcaggaaacacatttcctgcagattttgccaaggatttaagttccg 34282913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 34540190 - 34540155
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||| |||||||||||||||||||||||    
T  34540190 cagaagtcctagttcaactggcaaaatgccgaaatt 34540155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 35421748 - 35421709
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  35421748 catccagaagtcctagttcaactggcaaaatgtcgaaatt 35421709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 2442761 - 2442799
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  2442761 atccataagtcctagctcaactggcaaaatgtcgaaatt 2442799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4694816 - 4694778
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  4694816 atccataagtcctagctcaactggcaaaatgtcgaaatt 4694778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 5895924 - 5895886
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  5895924 atccataagtcctagctcaactggcaaaatgtcgaaatt 5895886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 8569944 - 8569982
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  8569944 atccagaagtcctagctcaactggcaaaagaccgaaatt 8569982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 9998768 - 9998734
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||    
T  9998768 agaagtcctagttcaactggcaaaatgccgaaatt 9998734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 10096615 - 10096649
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||| |||||||    
T  10096615 agaagtcctagctcaactggcaaaatgtcgaaatt 10096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 15129636 - 15129674
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  15129636 atccagaagtcctagctcaaccggcaaaatgccaaaatt 15129674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 17649970 - 17649932
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  17649970 atccagaaatcctagctcaactggcaaaataccgaaatt 17649932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 536
Target Start/End: Complemental strand, 20990542 - 20990508
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccga 536  Q
    |||||||||| ||||||||||||||||||||||||    
T  20990542 atccagaagttctagctcaactggcaaaatgccga 20990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 23554869 - 23554907
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  23554869 atccagaaatcctagctcaactggtaaaatgccgaaatt 23554907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23872840 - 23872802
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  23872840 atccagaagtcctaactcaactggcaaaatgccaaaatt 23872802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 27545045 - 27545007
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  27545045 atccagaagttctagctcaactggcaaaatgtcgaaatt 27545007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 31639231 - 31639193
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  31639231 atccagaagtcctaactcaactagcaaaatgccgaaatt 31639193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 536
Target Start/End: Complemental strand, 34744395 - 34744361
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccga 536  Q
    ||||||||||| |||||||||||||||||||||||    
T  34744395 atccagaagtcatagctcaactggcaaaatgccga 34744361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 37817375 - 37817413
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  37817375 atccataagtcctagctcaactggcaaaatgacgaaatt 37817413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 40344489 - 40344527
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  40344489 atccagaagtcctagttcaactgtcaaaatgccgaaatt 40344527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 532
Target Start/End: Complemental strand, 40744371 - 40744341
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatg 532  Q
    |||||||||||||||||||||||||||||||    
T  40744371 atccagaagtcctagctcaactggcaaaatg 40744341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 41562441 - 41562479
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  41562441 atccagaagtcctagctcaactggtaaaatgtcgaaatt 41562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 9569728 - 9569761
Alignment:
Q  507 gaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||| |||||||||||||||||||||||||||    
T  9569728 gaagtcttagctcaactggcaaaatgccgaaatt 9569761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 31500789 - 31500736
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatttttt 368  Q
    ||||||||| |||||||||||| |||||||||||  |||| | |||||||||||    
T  31500789 aggaaatgtaaaattattcgtatgaaggaagtaatattttgcaataaatttttt 31500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 41746776 - 41746739
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  41746776 tccagaagtcctagctcaactgacaaaatgccaaaatt 41746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 6377530 - 6377614
Alignment:
Q  190 tttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||  ||||||||||||| |||| | |||||| || ||| | ||||||||  |||||||  ||| |||||||||||    
T  6377530 tttttctgcggaactacctgcggatttatgtgaatattccgcagaaaacggttttcctgtggattttgtcaagaatttaggttcc 6377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 536
Target Start/End: Original strand, 10617782 - 10617818
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgccga 536  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  10617782 gcatcaagaagtcctagctcaactgacaaaatgccga 10617818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 44604944 - 44604912
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||    
T  44604944 aagtcctagctcaattggcaaaatgccgaaatt 44604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 2e-84; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 7500941 - 7501179
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||    |||||| ||||||    
T  7500941 ttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttacatgcggatgtttgtgtaaattccgcaggaaacacatttcctacagatt 7501040  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  7501041 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaagtaagtaacgtttt 7501140  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||||||||||  | |||||||||||||||||||||    
T  7501141 gcgataaattttttatcgaggctctataaaattcctggc 7501179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 14461062 - 14461288
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| |||||||||||||||| |||||            ||||||||||||| ||||||||||| ||||||||| | |||||||||||    
T  14461062 ttgtagcaagccctaccattactagaatttttaactttt------------cctgcggatttttatgtaaattccgcaggaaatgtatgtcctgcagatt 14461149  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  14461150 ttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtaaaattattcgtaggaaggaagtaacgtttt 14461249  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
      |||||||||||||||||||||||||||||||||||||    
T  14461250 gtgataaattttttgcccaggctctataaaattcctggc 14461288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 28311313 - 28311500
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28311313 cctgcggatttttgtgtaaattccgcaggaaatgtatttcctgtagattttgccaaggatttaggttccgctggaaagatatatccgtaggaaatgtgaa 28311412  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  28311413 tttatctgcaggaaatgtgaaattattcgtaggaaggaagtaatgttttgcgataaattttttgcccagactctataaaattcctggc 28311500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 44047581 - 44047806
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44047581 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaatgtatttcctgcagatt 44047668  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  44047669 ttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattatttgtaggaaagaagtaacgtttt 44047768  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||||||||||| |||| ||||| ||||||||||||    
T  44047769 gcgataaattttttgtccagactcta-aaaattcctggc 44047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 53651895 - 53652121
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  53651895 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaatgcatttcctgcagatt 53651982  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||    
T  53651983 ttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaagaacgtaatgtttt 53652082  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     |||||||||||||| |||| ||||||||||||||||||    
T  53652083 gcgataaattttttgtccagactctataaaattcctggc 53652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 12909817 - 12910049
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgttttt--------cc 246  Q
    |||||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||||| |||        ||    
T  12909817 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaatgtattttctgatttcc 12909904  T
Q  247 tgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagt 346  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  12909905 tgcagattttgccaaagatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctacaggaaatgtgaaattattcg--ggaaggaagt 12910002  T
Q  347 aacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  12910003 aacgatttgcgataaattttttgcccaggctctataaaattcctggc 12910049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 37516627 - 37516844
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||| || || |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||    |||||||||||||    
T  37516627 ttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggaattttgtgtaaattctgcaggaaacacatttcctgcagatt 37516726  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||                     ||||||||||| |||||||||||||||||||    
T  37516727 ttgccaaggatctaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacgtttt 37516805  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||||||||||||||||||||||||||    
T  37516806 gcgataaattttttgcccaggctctataaaattcctggc 37516844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 172 - 393
Target Start/End: Complemental strand, 26371140 - 26370940
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||    
T  26371140 attactagaaattttagcattttctgcggatttacctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 26371041  T
Q  272 tccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcc 371  Q
    |||||||||||||||||||||||||||||||                     ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  26371040 tccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcc 26370962  T
Q  372 caggctctataaaattcctggc 393  Q
    ||| ||||||||||||||||||    
T  26370961 cagactctataaaattcctggc 26370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 241 - 387
Target Start/End: Complemental strand, 43700243 - 43700097
Alignment:
Q  241 ttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaa 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| || ||    
T  43700243 ttttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgttggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagaaa 43700144  T
Q  341 ggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
     ||||||||||||| ||||| ||||||| |||| |||||||||||||    
T  43700143 agaagtaacgttttgcgatatattttttacccaagctctataaaatt 43700097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 393
Target Start/End: Complemental strand, 25391946 - 25391743
Alignment:
Q  157 gtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatttt 256  Q
    |||||||||||||| ||||||||||||||||||||||            ||||||||||||||||||||||||| | ||||||| |||| |||| |||||    
T  25391946 gtagcaagccctaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaagaaatgtatttcttgcaaatttt 25391859  T
Q  257 gctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttac 356  Q
    || |||||||||||||||||||||||||||||||||||||||||||                     ||||||||||||| ||||||||||| ||||| |    
T  25391858 gccaaggatttaggttccgcaggaaagatatatccgtaggaaatgt---------------------gaaattattcgtaagaaggaagtaatgttttgc 25391780  T
Q  357 gataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25391779 gataaattttttgcccaagctctataaaattcctggc 25391743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 391
Target Start/End: Complemental strand, 33179109 - 33178992
Alignment:
Q  274 cgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgccca 373  Q
    ||||||||||||||||||| || |||||||||  ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  33179109 cgcaggaaagatatatccgcagaaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgccca 33179010  T
Q  374 ggctctataaaattcctg 391  Q
    | ||||||||||||||||    
T  33179009 gactctataaaattcctg 33178992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 288 - 391
Target Start/End: Complemental strand, 41218358 - 41218255
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| ||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  41218358 atccgcaggaaatgtaaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcctagactctataaaatt 41218259  T
Q  388 cctg 391  Q
    ||||    
T  41218258 cctg 41218255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 41218507 - 41218389
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| ||||||||||| |||||||||||| |||| |||||||| ||||||||| ||||||    |||||||| ||||    
T  41218507 ttgtagcaagcccagccattactagaacttttagcttttcctgcggatttacttgcgcatttttgtctaaattccgcaggaaacacatttcctgccgatt 41218408  T
Q  255 ttgctaaggatttaggttc 273  Q
    |||| ||| ||||||||||    
T  41218407 ttgccaagaatttaggttc 41218389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 26278365 - 26278460
Alignment:
Q  172 attactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||| ||||||    |||||||||||||||||  |||||||    
T  26278365 attactagaatttttagcttttcatgcggatttacctacggatttttatgtaaattccggaggaaacacatttcctgcagattttgcctaggattt 26278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 35077232 - 35077321
Alignment:
Q  178 agaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    |||| ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||    |||||||||||||||||  |||||||    
T  35077232 agaacttttagctttttctgcggatttacctgggaatttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 35077321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 53987974 - 53988055
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaa-ttttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||| |||||||||||||| |||| | ||||| |||||||||| | |||||||||||| |||||    
T  53987974 gcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataaatttttttgcccggactctataaaatttctggc 53988055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 499 - 540
Target Start/End: Complemental strand, 6583367 - 6583326
Alignment:
Q  499 agcatccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6583367 agcatccagaagtcctagctcaactggcaaaatgccgaaatt 6583326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 33179209 - 33179141
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||| |||||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||||    
T  33179209 cctgcgaatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcc 33179141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 4833239 - 4833200
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4833239 catccagaagtcctagctcaactggcaaaatgccgaaatt 4833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 2687558 - 2687596
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2687558 atccagaagtcctagctcaactggcaaaatgccgaaatt 2687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 3917765 - 3917803
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3917765 atccagaagtcctagctcaactggcaaaatgccgaaatt 3917803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4232306 - 4232268
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4232306 atccagaagtcctagctcaactggcaaaatgccgaaatt 4232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 8381078 - 8381116
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8381078 atccagaagtcctagctcaactggcaaaatgccgaaatt 8381116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 9600460 - 9600506
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgat 359  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  9600460 gcaggaaatatgaaattattcgtaggaaggaagtaacattttacgat 9600506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 13525168 - 13525206
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13525168 atccagaagtcctagctcaactggcaaaatgccgaaatt 13525206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 21402787 - 21402749
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21402787 atccagaagtcctagctcaactggcaaaatgccgaaatt 21402749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 24910417 - 24910379
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24910417 atccagaagtcctagctcaactggcaaaatgccgaaatt 24910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 30553097 - 30553059
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30553097 atccagaagtcctagctcaactggcaaaatgccgaaatt 30553059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 32961107 - 32961069
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32961107 atccagaagtcctagctcaactggcaaaatgccgaaatt 32961069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 41464663 - 41464701
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41464663 atccagaagtcctagctcaactggcaaaatgccgaaatt 41464701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 44037573 - 44037535
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44037573 atccagaagtcctagctcaactggcaaaatgccgaaatt 44037535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 30172616 - 30172693
Alignment:
Q  190 tttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    |||| ||||||| |||||||||| |||| || ||||||| | |||||||  ||||||| |||||||||||||||||||    
T  30172616 ttttcctgcggaattacctgcggcttttggtataaattctgcaggaaatagttttcctacagattttgctaaggattt 30172693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 44625695 - 44625744
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  44625695 ttgtagcaagcccaactattactagaatttttagcttttcctgcagattt 44625744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 387
Target Start/End: Original strand, 26278475 - 26278547
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||||||||||||||||||| | |||||||||| | |||| |||||| ||||||||| |  ||||||||||||    
T  26278475 aggaaatgtgaaattattcgcaagaaggaagtatcattttgcgataatttttttgcctaaactctataaaatt 26278547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 53068278 - 53068346
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||||||  ||||||    ||||||||||||||||| ||| |||||||||||    
T  53068278 cctgcggatttttgtgtaaattccacaggaaacacatttcctgcagattttgccaagaatttaggttcc 53068346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 27002870 - 27002831
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  27002870 catccagaagtcctagctcaactggcaaagtgccgaaatt 27002831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 27396852 - 27396891
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27396852 catccagaagtcctagctcaactgacaaaatgccgaaatt 27396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 1242220 - 1242254
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  1242220 agaagtcctagctcaactggcaaaatgccgaaatt 1242254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 2789107 - 2789069
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2789107 atccagaagtcctagttcaactggcaaaatgccgaaatt 2789069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 2900254 - 2900292
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2900254 atccagaagtcctagctccactggcaaaatgccgaaatt 2900292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4976837 - 4976799
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4976837 atccagaagtcctagctcaactggcaaaatgccaaaatt 4976799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 6083270 - 6083232
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  6083270 atccagaagtcctagctcaactagcaaaatgccgaaatt 6083232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 11312593 - 11312627
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  11312593 agaagtcctagctcaactggcaaaatgccgaaatt 11312627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 22371449 - 22371487
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22371449 atccagaagtcctacctcaactggcaaaatgccgaaatt 22371487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 24250724 - 24250762
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24250724 atccagaagtcctagctcaattggcaaaatgccgaaatt 24250762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 24650676 - 24650638
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  24650676 atccagaagtcctacctcaactggcaaaatgccgaaatt 24650638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 24751752 - 24751790
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24751752 atccacaagtcctagctcaactggcaaaatgccgaaatt 24751790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 28266525 - 28266563
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28266525 atccagaagtcctagctcaactgacaaaatgccgaaatt 28266563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 29212194 - 29212156
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  29212194 atccataagtcctagctcaactggcaaaatgccgaaatt 29212156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 34397679 - 34397717
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34397679 atccagaagtcctagttcaactggcaaaatgccgaaatt 34397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 38127971 - 38127933
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  38127971 atccagaagtcctagctcaactggcaaaatgtcgaaatt 38127933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 46838856 - 46838818
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  46838856 atccagaagtcctagctcaactggaaaaatgccgaaatt 46838818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 47408839 - 47408877
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  47408839 atccagaagtcctagctcaactagcaaaatgccgaaatt 47408877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 47410881 - 47410843
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  47410881 atccagaagtcctagctcaactggcaaaatgtcgaaatt 47410843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 53583960 - 53583998
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  53583960 atccagaagtcctagctcaactggcaaaatgtcgaaatt 53583998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 54097569 - 54097531
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  54097569 atccagaagtcctagctcaaatggcaaaatgccgaaatt 54097531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 43700278 - 43700229
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggattt 204  Q
    ||||||||||||| || |||||||||||||||||||||| |||| |||||    
T  43700278 ttgtagcaagcccaaccattactagaatttttagcttttcctgcagattt 43700229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 41358597 - 41358541
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttg 369  Q
    |||||||||||| |||||| || ||||||||| ||||||||| |||||| |||||||    
T  41358597 gcaggaaatgtgcaattatccgcaggaaggaaataacgttttgcgataatttttttg 41358541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 53710667 - 53710703
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctgg 392  Q
    |||||||||||||||||||||||||| ||||||||||    
T  53710667 cgataaattttttgcccaggctctatgaaattcctgg 53710703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 17500925 - 17500964
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  17500925 catccagaagtcctaactcaactggaaaaatgccgaaatt 17500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 28171109 - 28171070
Alignment:
Q  502 atccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  28171109 atccagaagtcctagctcaactggcaaaaatgccgaaatt 28171070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 41921508 - 41921543
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41921508 cagaagtcctagctcaactggtaaaatgccgaaatt 41921543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 533
Target Start/End: Complemental strand, 43605705 - 43605674
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgc 533  Q
    ||||||||||||||||||||||||||||||||    
T  43605705 atccagaagtcctagctcaactggcaaaatgc 43605674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 8507931 - 8507969
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  8507931 atccagaagtcttagctcaactggaaaaatgccgaaatt 8507969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 8826624 - 8826662
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  8826624 atccagaagtcctagctcaacggacaaaatgccgaaatt 8826662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 10047871 - 10047909
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  10047871 atccagaagtcctagctcaattggtaaaatgccgaaatt 10047909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 14868983 - 14868946
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  14868983 atccagaagtcctagctcaactggc-aaatgccgaaatt 14868946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 15003627 - 15003665
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  15003627 atccagaagtcctagttcaactggcaaaatgccaaaatt 15003665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 19921441 - 19921403
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  19921441 atccagaagtcctagctcaattggcaaaatgctgaaatt 19921403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 24657410 - 24657448
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  24657410 atccagaagtcctaactcaactgacaaaatgccgaaatt 24657448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 32590971 - 32591009
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  32590971 atccagaagtcctagctcaactggtaaaatgtcgaaatt 32591009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 37124215 - 37124253
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  37124215 atccagaagtcatagctctactggcaaaatgccgaaatt 37124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 40559673 - 40559711
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  40559673 atccagaagtcctagctcaactgataaaatgccgaaatt 40559711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 43898092 - 43898054
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  43898092 atccagaagtcctagctcaacagacaaaatgccgaaatt 43898054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 9600386 - 9600447
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    ||||||||||||| ||||||||| | ||||||    |||||||||||||||||| |||||||    
T  9600386 cctgcggatttttatgtaaattctgcaggaaacacatttcctgcagattttgcttaggattt 9600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 530
Target Start/End: Original strand, 11029661 - 11029690
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaa 530  Q
    ||||||||||||||||||||||||||||||    
T  11029661 catccagaagtcctagctcaactggcaaaa 11029690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 31989298 - 31989335
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  31989298 cgataaattttttgcccaggctctatgaaatttctggc 31989335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 37312528 - 37312565
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  37312528 tccagaagtcctagctcaactggtaaaataccgaaatt 37312565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 53987900 - 53987961
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggattt 267  Q
    ||||||||||||| ||||||||||| ||||||    |||||||||||||||||  |||||||    
T  53987900 cctgcggatttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 53987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 10474037 - 10474005
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||| ||||||    
T  10474037 aagtcctagctcaactggcaaaatgctgaaatt 10474005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 11554 - 11741
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||||||||| |||||||||||||| || |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11554 cctgcggattattgtgtaaattccgcagaaaatgcatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 11653  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  11654 tttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggttctataaaattcctggc 11741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 155 - 390
Target Start/End: Original strand, 6902 - 7124
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||||| ||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||  |||||||||||||    
T  6902 ttgtagcaagccctaccattactagaatttttagctttt------------cctgcggattattgtgtaaattccgaaggaaatgcatttcctgcagatt 6989  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||    
T  6990 ttgccaaggatttaggttccgcaggaaggatatatccgtaggaaatgtgaatttatcagcaggaaatgtaaaattattcgtaggaaggaagtaacg-ttt 7088  T
Q  355 acgataaattttttgcccaggctctataaaattcct 390  Q
     |||||||||||||||||||| ||||||||||||||    
T  7089 gcgataaattttttgcccaggttctataaaattcct 7124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 3e-68; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 41114954 - 41114767
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||||||||||| |||||||||||| ||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  41114954 cctgcggattttcgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaa 41114855  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
      ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  41114854 attatctgcaggaaatgtgaaattattcgcatgaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattcctggc 41114767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 206 - 390
Target Start/End: Complemental strand, 6799970 - 6799786
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    ||||||||||||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6799970 cctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 6799871  T
Q  306 tctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcct 390  Q
      ||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||   |||||||||||||||||||||||||    
T  6799870 attatctgcaggaaatgtgaaattattcgcaggaaggaactaacgttttgtgataaaaaatttgcccaggctctataaaattcct 6799786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 210 - 393
Target Start/End: Original strand, 29257401 - 29257584
Alignment:
Q  210 cggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatcta 309  Q
    |||||||||||||||||| || ||||||    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||  ||    
T  29257401 cggatttttgtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaactta 29257500  T
Q  310 tctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  29257501 tctgcaggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggc 29257584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 155 - 393
Target Start/End: Original strand, 13203759 - 13203985
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || ||||||||||||||||||||||            ||||||||||||||||||||||||| ||||||    |||||||||||||    
T  13203759 ttgtagcaagcccaaccattactagaatttttagctttt------------cctgcggatttttgtgtaaattccgcaggaaacacgtttcctgcagatt 13203846  T
Q  255 ttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgtttt 354  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||| | |||||||||||||||||  ||||||||||||| ||||    
T  13203847 ttgccaaggatttaggttccgcaggaaagagatatccgtaggaaatgtgaaattatctgcggaaaatgtgaaattattcgctggaaggaagtaacatttt 13203946  T
Q  355 acgataaattttttgcccaggctctataaaattcctggc 393  Q
     ||||||||||||||| || |||||||||||||||||||    
T  13203947 gcgataaattttttgctcatgctctataaaattcctggc 13203985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 18299225 - 18299060
Alignment:
Q  208 tgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatc 307  Q
    ||||||||||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||      
T  18299225 tgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatctgtaggaaatgtgaaat 18299126  T
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgccca 373  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18299125 tatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttacgataaattttttgccca 18299060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 265 - 393
Target Start/End: Complemental strand, 304117 - 303989
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatt 364  Q
    |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||  | ||||||||||||| |||||| ||    
T  304117 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagataagaagtaacgttttgcgataattt 304018  T
Q  365 ttttgcccaggctctataaaattcctggc 393  Q
    |||||||||  |||||||||||| |||||    
T  304017 ttttgcccaaactctataaaatttctggc 303989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 25562915 - 25563034
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    ||||||||||||| || |||||||||| ||||||||||| ||||||||||| ||||||||| || ||||||||||| |||||||   |||||||||||||    
T  25562915 ttgtagcaagcccaaccattactagaacttttagcttttcctgcggatttatctgcggattgttttgtaaattccgcaggaaatacatttcctgcagatt 25563014  T
Q  255 ttgctaaggatttaggttcc 274  Q
    |||| |||||||||||||||    
T  25563015 ttgccaaggatttaggttcc 25563034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 41010624 - 41010727
Alignment:
Q  287 tatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaat 386  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||  |||||||||||    
T  41010624 tatccgtaggaaatgtgaaattttctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgtccacactctataaaat 41010723  T
Q  387 tcct 390  Q
    ||||    
T  41010724 tcct 41010727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 2475944 - 2476022
Alignment:
Q  313 gcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctg 391  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2475944 gcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaattcctg 2476022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 393
Target Start/End: Original strand, 12000646 - 12000775
Alignment:
Q  265 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcagg-aaatgtgaaattattcgtaggaaggaagtaacgttttacgataaat 363  Q
    |||||| ||||||||||||||||||||| ||||||||||||  |||| || || |||||| |||||||||| |||||||| ||||| |||| |||||| |    
T  12000646 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatccgccggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataatt 12000745  T
Q  364 tttttgcccaggctctataaaattcctggc 393  Q
    |||||||| |||||||||| ||||||||||    
T  12000746 tttttgcctaggctctatataattcctggc 12000775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 17148909 - 17149008
Alignment:
Q  288 atccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||| |||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||| ||||||||    
T  17148909 atccgcaggaaatgtggaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgagataaattttttgcccaagctcaataaaatt 17149008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 22572697 - 22572619
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||||    
T  22572697 aggaaatgtgaaattattcgcaggaagaaagtaacgttttgcgataaattttttgtccaggctttataaaattcctggc 22572619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 308 - 391
Target Start/End: Original strand, 17249463 - 17249546
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctg 391  Q
    |||| |||||||||||||||||||||| |||||| |||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  17249463 tatccgcaggaaatgtgaaattattcgcaggaagaaagtaacgttttgctataaatattttgcccagactctataaaattcctg 17249546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 22572785 - 22572686
Alignment:
Q  206 cctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||||| |||||||||||||||||  ||||||    ||||||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||||||    
T  22572785 cctgcgaatttttgtgtaaattccccaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatattcataggaaatgtgaa 22572686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 393
Target Start/End: Original strand, 15651342 - 15651458
Alignment:
Q  277 aggaaagatatatccgtaggaaatgtgaatctatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccagg 375  Q
    |||||||||||||||  ||||||||||||  |||| |||||||| ||| |||||||||| |||||||| ||||| |||| ||||||| |||||||| |||    
T  15651342 aggaaagatatatccccaggaaatgtgaaattatccgcaggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataaa-tttttgccgagg 15651440  T
Q  376 ctctataaaattcctggc 393  Q
    ||||||| ||||| ||||    
T  15651441 ctctatataattcttggc 15651458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 393
Target Start/End: Original strand, 25563091 - 25563190
Alignment:
Q  294 aggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||  |||||||||||||| |||||||||| | || |||||||||||||||| |||||||    || |||| |||||||||||||||||||    
T  25563091 aggaaatgtgaaattatctgcaggaaatatgaaattatttgcagaaaggaagtaacgttttgcgataaaaaaatttcccaagctctataaaattcctggc 25563190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 17148808 - 17148879
Alignment:
Q  202 tttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||||||||||||||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||||    
T  17148808 tttacctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgc-aaggatttaggttcc 17148879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 33909323 - 33909250
Alignment:
Q  314 caggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||||||| | | |||||| ||||| |||| ||||||| ||||||||||| ||||||||||||    
T  33909323 caggaaatgtgaaattatttgcatgaaggatgtaacattttgcgataaagtttttgcccagactctataaaatt 33909250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 45444436 - 45444376
Alignment:
Q  308 tatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaatttttt 368  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||| | |||||||||||    
T  45444436 tatctacaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcaataaatttttt 45444376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 2475894 - 2475957
Alignment:
Q  242 tttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaa 305  Q
    |||| |||||||||||| || ||| ||||||||||||||||||||||| || ||||||||||||    
T  2475894 tttcttgcagattttgccaatgatataggttccgcaggaaagatatattcgcaggaaatgtgaa 2475957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 16221001 - 16220926
Alignment:
Q  318 aaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||| ||||||  | || |||||| ||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  16221001 aaatgtgcaattatatgcagaaaggaaataacgttttgcgataatttttttgcccaggctctataaaatttctggc 16220926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 2287438 - 2287400
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2287438 atccagaagtcctagctcaactggcaaaatgccgaaatt 2287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 13268104 - 13268066
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13268104 atccagaagtcctagctcaactggcaaaatgccgaaatt 13268066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 15897213 - 15897251
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15897213 atccagaagtcctagctcaactggcaaaatgccgaaatt 15897251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 20251614 - 20251576
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20251614 atccagaagtcctagctcaactggcaaaatgccgaaatt 20251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23080227 - 23080189
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23080227 atccagaagtcctagctcaactggcaaaatgccgaaatt 23080189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 32023251 - 32023289
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32023251 atccagaagtcctagctcaactggcaaaatgccgaaatt 32023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 33607042 - 33607080
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33607042 atccagaagtcctagctcaactggcaaaatgccgaaatt 33607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 34667043 - 34667081
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34667043 atccagaagtcctagctcaactggcaaaatgccgaaatt 34667081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 36754870 - 36754832
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36754870 atccagaagtcctagctcaactggcaaaatgccgaaatt 36754832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 38490529 - 38490491
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38490529 atccagaagtcctagctcaactggcaaaatgccgaaatt 38490491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 40592312 - 40592350
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40592312 atccagaagtcctagctcaactggcaaaatgccgaaatt 40592350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42160386 - 42160348
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42160386 atccagaagtcctagctcaactggcaaaatgccgaaatt 42160348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 34756705 - 34756790
Alignment:
Q  189 ctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    ||||| |||||||||||||||| |||||| |||||||||||| |||||     |||||||  |||||||| |||||||||||||||    
T  34756705 cttttcctgcggatttacctgcagattttggtgtaaattccgtaggaatcacgtttcctgtggattttgccaaggatttaggttcc 34756790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 6731540 - 6731579
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  6731540 catccagaagtcctagctcaactagcaaaatgccgaaatt 6731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 7958114 - 7958075
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  7958114 catccagaagtcctagctcaactggcaaaataccgaaatt 7958075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 26655737 - 26655702
Alignment:
Q  352 tttacgataaattttttgcccaggctctataaaatt 387  Q
    ||||||||||||||||||||||||||||||||||||    
T  26655737 tttacgataaattttttgcccaggctctataaaatt 26655702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 34481797 - 34481762
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||    
T  34481797 cagaagtcctagctcaactggcaaaatgccgaaatt 34481762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 41010507 - 41010574
Alignment:
Q  207 ctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttcc 274  Q
    |||||||||||||| ||||||| | ||||||    ||||||||||||||| |||||||||||||||||    
T  41010507 ctgcggatttttgtataaattctgcaggaaacacatttcctgcagattttactaaggatttaggttcc 41010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 727418 - 727380
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  727418 atccagaagtcctagctcaactgacaaaatgccgaaatt 727380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 7975143 - 7975105
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7975143 atccacaagtcctagctcaactggcaaaatgccgaaatt 7975105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 12236120 - 12236158
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12236120 atccagaagtcctagctcaactggtaaaatgccgaaatt 12236158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 18368797 - 18368831
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  18368797 agaagtcctagctcaactggcaaaatgccgaaatt 18368831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 18999328 - 18999366
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  18999328 atccagaagtcctaactcaactggcaaaatgccgaaatt 18999366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 35476619 - 35476581
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35476619 atccagaagtcctagctcaactggcaaaatgtcgaaatt 35476581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 35706851 - 35706889
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35706851 atccagaagtcctagctcaactggcaaaatgtcgaaatt 35706889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42200991 - 42200953
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  42200991 atccagaagtcctagctcaactggcaaaatgccaaaatt 42200953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 39070019 - 39070056
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39070019 tccagaagtcctagctcaactggtaaaatgccgaaatt 39070056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 536
Target Start/End: Original strand, 10392643 - 10392678
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccga 536  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10392643 catccagaagtcctagctcaactggtaaaatgccga 10392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 16010743 - 16010704
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  16010743 catccagaagtcgtagctcaactggcaaaatgtcgaaatt 16010704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Original strand, 38463141 - 38463176
Alignment:
Q  505 cagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||| |||||||||||||||||||||||||||    
T  38463141 cagaagtcttagctcaactggcaaaatgccgaaatt 38463176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4014942 - 4014904
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  4014942 atccacaagtcctagctcaactgacaaaatgccgaaatt 4014904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 540
Target Start/End: Complemental strand, 11543932 - 11543890
Alignment:
Q  499 agcatccagaagtcctagctcaactggc-aaaatgccgaaatt 540  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  11543932 agcattcagaagtcctagctcaactggcaaaaatgccgaaatt 11543890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 12000553 - 12000619
Alignment:
Q  206 cctgcggat-ttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggt 271  Q
    ||||||||| |||||||||||||||| ||||||    ||||||||||||||||| |||||| |||||    
T  12000553 cctgcggatgttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatataggt 12000619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 23497641 - 23497603
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  23497641 atccagaagtcctagttcaactggtaaaatgccgaaatt 23497603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 23957051 - 23957089
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  23957051 atccagaagttctagctcaactggcaaaatgtcgaaatt 23957089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 28855543 - 28855505
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  28855543 atccggaagtcctagctcaactggcaaaatgccaaaatt 28855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 29741087 - 29741049
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  29741087 atccagaagtcctagctcaactggaaaaatgtcgaaatt 29741049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 35687915 - 35687877
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  35687915 atccagaagtcctagctcaactgataaaatgccgaaatt 35687877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 40812016 - 40812054
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  40812016 atccagaagtcctacctcaactgacaaaatgccgaaatt 40812054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 41164777 - 41164739
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||| || |||||||    
T  41164777 atccagaagtcctagctcaactggcaaagtgtcgaaatt 41164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 42007344 - 42007306
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  42007344 atccagaagtcctagctcaactggtaaaatgtcgaaatt 42007306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 43035439 - 43035477
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  43035439 atccagaagtcctagctcaattggcaaaataccgaaatt 43035477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 44948018 - 44948056
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  44948018 atccagaagtcctagctcaactgacaaaatgtcgaaatt 44948056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 45049384 - 45049422
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  45049384 atccagaagtcttagctcaactggcaaaatgtcgaaatt 45049422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 393
Target Start/End: Original strand, 1542853 - 1542882
Alignment:
Q  364 tttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||||||||||||    
T  1542853 tttttgcccaggctctataaaattcctggc 1542882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Complemental strand, 11816678 - 11816642
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11816678 tccagaagtcctagctcaactggc-aaatgccgaaatt 11816642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 533
Target Start/End: Original strand, 32120607 - 32120640
Alignment:
Q  500 gcatccagaagtcctagctcaactggcaaaatgc 533  Q
    ||||| ||||||||||||||||||||||||||||    
T  32120607 gcatctagaagtcctagctcaactggcaaaatgc 32120640  T

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Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 42755617 - 42755580
Alignment:
Q  356 cgataaattttttgcccaggctctataaaattcctggc 393  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  42755617 cgataaatttttcgcccaggctctatataattcctggc 42755580  T

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Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 19967739 - 19967771
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||    
T  19967739 aagtcctagctcaactggcaaaataccgaaatt 19967771  T

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Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 39368584 - 39368628
Alignment:
Q  352 tttacgataaattttttgcccaggctctataaaattcctggcacc 396  Q
    |||||||||||||||| || ||| ||||||||||||| |||||||    
T  39368584 tttacgataaatttttcgctcagactctataaaattcttggcacc 39368628  T

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Target: scaffold0618 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 210 - 393
Target Start/End: Original strand, 1730 - 1913
Alignment:
Q  210 cggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatcta 309  Q
    |||||||||||||||||| || ||||||    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||  ||    
T  1730 cggatttttgtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaactta 1829  T
Q  310 tctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaattcctggc 393  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1830 tctgcaggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggc 1913  T

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Target: scaffold0638 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 387
Target Start/End: Original strand, 4217 - 4289
Alignment:
Q  315 aggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaattttttgcccaggctctataaaatt 387  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  4217 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatt 4289  T

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Target: scaffold0638; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 4090 - 4202
Alignment:
Q  155 ttgtagcaagccctactattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagatt 254  Q
    |||||||||||||  | |||||||||| ||||||||||| ||||| |||||||||||||| ||| ||||||||||| ||||||    |||||||||||||    
T  4090 ttgtagcaagcccagccattactagaacttttagcttttcctgcgaatttacctgcggatgtttatgtaaattccgtaggaaacacatttcctgcagatt 4189  T
Q  255 ttgctaaggattt 267  Q
    ||||  |||||||    
T  4190 ttgcccaggattt 4202  T

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Target: scaffold0021 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 171 - 400
Target Start/End: Complemental strand, 109419 - 109194
Alignment:
Q  171 tattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattccgaaggaaatgtttttcctgcagattttgctaaggatttagg 270  Q
    ||||||||||| ||||| ||||| ||| ||||||||||||| |||||||||||||||||| || |||    | | ||||||||||||||||| |||||||    
T  109419 tattactagaacttttaacttttcctgtggatttacctgcgaatttttgtgtaaattccgcagaaaacacatgttctgcagattttgctaagaatttagg 109320  T
Q  271 ttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaat-tttttg 369  Q
    |||| ||||  |||||   || |||||  |  | ||| |    ||||||| ||||||||||||| ||||||||||||| ||||| | |||||| ||||||    
T  109319 ttcc-caggtgagataataccataggattttaggatcca----caggaaacgtgaaattattcgcaggaaggaagtaatgttttgcaataaatatttttg 109225  T
Q  370 cccaggctctataaaattcctggcaccacca 400  Q
     ||||||||||| ||||| || || ||||||    
T  109224 tccaggctctatgaaatttctagctccacca 109194  T

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Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 112334 - 112276
Alignment:
Q  171 tattactagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattcc 229  Q
    ||||||||||| ||||| ||||| || |||||||||||||| |||||||||||||||||    
T  112334 tattactagaacttttaacttttcctacggatttacctgcgaatttttgtgtaaattcc 112276  T

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Target: scaffold0021; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 400
Target Start/End: Complemental strand, 112179 - 112095
Alignment:
Q  317 gaaatgtgaaattattcgtaggaaggaagtaacgttttacgataaat-tttttgcccaggctctataaaattcctggcaccacca 400  Q
    |||| ||||||||||| | ||||||||||||| ||||| | |||||| ||||||||||||||| || ||||| ||| | ||||||    
T  112179 gaaacgtgaaattatttgcaggaaggaagtaatgttttgcaataaatatttttgcccaggctcaatgaaatttctgactccacca 112095  T

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Target: scaffold0432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 9365 - 9404
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9365 catccagaagtcctagctcaactggcaaaatgccgaaatt 9404  T

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Target: scaffold0402 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 1370 - 1332
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1370 atccagaagtcctagctcaactggcaaaatgccgaaatt 1332  T

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Target: scaffold0287 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 1187 - 1149
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1187 atccagaagtcctagctcaactggcaaaatgccgaaatt 1149  T

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Target: scaffold0179 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 4144 - 4106
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4144 atccagaagtcctagctcaactggcaaaatgccgaaatt 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 90568 - 90606
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||||||    
T  90568 atccagaagtcctagctcaactggcaaaatgccgaaatt 90606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 6782 - 6816
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||||||||||||||    
T  6782 agaagtcctagctcaactggcaaaatgccgaaatt 6816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 8988 - 8950
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  8988 atccagaagtcatagctcaactggcaaaatgccgaaatt 8950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 39442 - 39404
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  39442 atccagaagtcctagctcaactggtaaaatgccgaaatt 39404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 816 - 855
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  816 catctagaagtcctagctcaactggcaaaatgtcgaaatt 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 7887 - 7848
Alignment:
Q  501 catccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  7887 catccagaagtcttagctcaattggcaaaatgccgaaatt 7848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 344 - 382
Alignment:
Q  502 atccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  344 atccaaaagtcctagctcaactggcaatatgccgaaatt 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Complemental strand, 15721 - 15687
Alignment:
Q  506 agaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    ||||||||||| |||||||||||||||||||||||    
T  15721 agaagtcctagttcaactggcaaaatgccgaaatt 15687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 3821 - 3788
Alignment:
Q  507 gaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||| |||||||||||||||||||||||||||    
T  3821 gaagtcttagctcaactggcaaaatgccgaaatt 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 34819 - 34855
Alignment:
Q  503 tccagaagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34819 tccagaagtcctagctcaactggc-aaatgccgaaatt 34855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 3918 - 3886
Alignment:
Q  508 aagtcctagctcaactggcaaaatgccgaaatt 540  Q
    |||||||||||||||||| ||||||||||||||    
T  3918 aagtcctagctcaactggtaaaatgccgaaatt 3886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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