View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16422_low_13 (Length: 348)
Name: NF16422_low_13
Description: NF16422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16422_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 44 - 320
Target Start/End: Original strand, 10702088 - 10702360
Alignment:
| Q |
44 |
attcaatcctttactactatttagtctggtctcatggccggtttccaaatcaaacatggtacaataaaaataatctaaaccattaacaaaataaaagagt |
143 |
Q |
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| T |
10702088 |
attcaattatttactactatttaatctggtctcatagccggtttctaaatcaaacatggtacaataaaaataatctcaattattaaaaaaataaaagagt |
10702187 |
T |
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| Q |
144 |
gattttataataaaacaaagggcctagagaagatttaagaatgaagtctttgagactattagaaaacataagaatatccgaattaataaatgttttatca |
243 |
Q |
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| T |
10702188 |
gattttataataaaacaaagggcctagtgaagatttaagagtgaaggc-ttgagactattagaaaacataagaatatccgaattaataaatgttttatca |
10702286 |
T |
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| Q |
244 |
tgtcataaatatatatgaggtatatatcttgggtacaatatggcttgacagtacatatatacttcaaccgtcttaca |
320 |
Q |
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| T |
10702287 |
tgtcataaatatatatgaggtatatatcttgggtgcaatatgac-tgacagt--atatatacttcaaccgttttaca |
10702360 |
T |
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