View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16426_low_5 (Length: 275)
Name: NF16426_low_5
Description: NF16426
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16426_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 52476341 - 52476509
Alignment:
| Q |
5 |
acctcaaagggaacgcaagcattgcttcagacacacgagcaacatccttgtgcatcattgctagttcatggctactctcaatgcttattagcatcttgca |
104 |
Q |
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| T |
52476341 |
acctcaaagggaacgcaagcattgcttcagacacacgagcaacatccttgtgcatcattgctagttcatggctactctcaatgcttattagcatcttgca |
52476440 |
T |
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| Q |
105 |
catcgctttacaagctagctgcattacaaaaaattgttttggttcatgtacttccttcctcacatttat |
173 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52476441 |
catcgctttacaagctagctgcattacaaaaaattgttttggttcatgtacttccttcctcacatttat |
52476509 |
T |
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