View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16427_low_1 (Length: 780)
Name: NF16427_low_1
Description: NF16427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16427_low_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 480; Significance: 0; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 12 - 519
Target Start/End: Original strand, 8412455 - 8412962
Alignment:
| Q |
12 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgaga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8412455 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgaga |
8412554 |
T |
|
| Q |
112 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8412555 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
8412654 |
T |
|
| Q |
212 |
ctgcatagagttgaactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8412655 |
ctgcatagagttgaactgtagcattagaaattgtagaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
8412754 |
T |
|
| Q |
312 |
tttgtactgtttgattacttttagttcctgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagctttgggagatggattgaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8412755 |
tttgtactgtttgattacttttagttcttgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagttttgggagatggattgaa |
8412854 |
T |
|
| Q |
412 |
gcattaattactctctttgaagatgatgataaagaacaagaaattggaactgaagtttgtaataaagtcatgatatatatgaattaatattatttgaaga |
511 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8412855 |
gcattaattactttctttgaagatgatgataaagaacaagaaattggaactgaagtttgtaataaagccatgatatatatgaattaatattatttgaagg |
8412954 |
T |
|
| Q |
512 |
gtgtttat |
519 |
Q |
| |
|
|||||||| |
|
|
| T |
8412955 |
gtgtttat |
8412962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 12 - 519
Target Start/End: Original strand, 8434553 - 8435060
Alignment:
| Q |
12 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgaga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8434553 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgaga |
8434652 |
T |
|
| Q |
112 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8434653 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
8434752 |
T |
|
| Q |
212 |
ctgcatagagttgaactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8434753 |
ctgcatagagttgaactgtagcattagaaattgtagaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
8434852 |
T |
|
| Q |
312 |
tttgtactgtttgattacttttagttcctgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagctttgggagatggattgaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8434853 |
tttgtactgtttgattacttttagttcttgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagttttgggagatggattgaa |
8434952 |
T |
|
| Q |
412 |
gcattaattactctctttgaagatgatgataaagaacaagaaattggaactgaagtttgtaataaagtcatgatatatatgaattaatattatttgaaga |
511 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8434953 |
gcattaattactttctttgaagatgatgataaagaacaagaaattggaactgaagtttgtaataaagccatgatatatatgaattaatattatttgaagg |
8435052 |
T |
|
| Q |
512 |
gtgtttat |
519 |
Q |
| |
|
|||||||| |
|
|
| T |
8435053 |
gtgtttat |
8435060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 424; E-Value: 0
Query Start/End: Original strand, 12 - 491
Target Start/End: Complemental strand, 8394994 - 8394515
Alignment:
| Q |
12 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgaga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8394994 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgaga |
8394895 |
T |
|
| Q |
112 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8394894 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
8394795 |
T |
|
| Q |
212 |
ctgcatagagttgaactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
311 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8394794 |
ctgcatagagttgaactgtagcattagaatttgtagaatgcttttgttgttgatcttgtaatatttgtgtgatgttgttgttttctaataatggagtatt |
8394695 |
T |
|
| Q |
312 |
tttgtactgtttgattacttttagttcctgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagctttgggagatggattgaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8394694 |
tttgtactgtttgattacttttagttcttgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagttttgggagatggattgaa |
8394595 |
T |
|
| Q |
412 |
gcattaattactctctttgaagatgatgataaagaacaagaaattggaactgaagtttgtaataaagtcatgatatatat |
491 |
Q |
| |
|
||||| |||||||| |||||||| || |||||||||||||||| | ||||||||||||||| | ||| |||||||||||| |
|
|
| T |
8394594 |
gcattgattactctatttgaagacgacgataaagaacaagaaagtagaactgaagtttgtattgaagacatgatatatat |
8394515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 8406335 - 8406560
Alignment:
| Q |
12 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgaga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406335 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaacaccagacatggttgtagcagtgaga |
8406434 |
T |
|
| Q |
112 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8406435 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
8406534 |
T |
|
| Q |
212 |
ctgcatagagttgaactgtagcatta |
237 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
8406535 |
ctgcatagagttgaactgtagcatta |
8406560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 8395237 - 8395012
Alignment:
| Q |
12 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgaga |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8395237 |
agcagagaataaaagagcagaggacagtttcatagccataagtggtgcaccttccccgtttgtgacagctgcaactccagacatggttgtagcagtgaga |
8395138 |
T |
|
| Q |
112 |
gtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
211 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8395137 |
gtaatcatttttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaaga |
8395038 |
T |
|
| Q |
212 |
ctgcatagagttgaactgtagcatta |
237 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
8395037 |
ctgcatagagttgaactgtagcatta |
8395012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 572 - 762
Target Start/End: Original strand, 8412961 - 8413151
Alignment:
| Q |
572 |
atatgaaaggttttagttgaatgttaatatgtgtaaggtggtatgaatatttatatatatagcaaagaacaaaagagaaggggtcagaatgaaacaaaga |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8412961 |
atatgaaaggttttagttgaatgttaatatgtgtaaggtggtatgaatatttatatatatagcaaagaacgaaagagaaggggtcagaatgaaacaaaga |
8413060 |
T |
|
| Q |
672 |
aaccctgattgaccagtttaattgaaatagtctctgttcaaaattcccagccttgtccttagtttgggtcacactcaacatacgacatagt |
762 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8413061 |
aaccctgattgaccagtttaattgaaatagtctctgttcaaaattcccagccttgtccttagtttgggtcacactcaacatacgacatagt |
8413151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 572 - 762
Target Start/End: Original strand, 8435059 - 8435249
Alignment:
| Q |
572 |
atatgaaaggttttagttgaatgttaatatgtgtaaggtggtatgaatatttatatatatagcaaagaacaaaagagaaggggtcagaatgaaacaaaga |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8435059 |
atatgaaaggttttagttgaatgttaatatgtgtaaggtggtatgaatatttatatatatagcaaagaacgaaagagaaggggtcagaatgaaacaaaga |
8435158 |
T |
|
| Q |
672 |
aaccctgattgaccagtttaattgaaatagtctctgttcaaaattcccagccttgtccttagtttgggtcacactcaacatacgacatagt |
762 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8435159 |
aaccctgattgaccagtttaattgaaatagtctctgttcaaaattcccagccttgtccttagtttgggtcacactcaacatacgacatagt |
8435249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 25 - 277
Target Start/End: Original strand, 8431496 - 8431743
Alignment:
| Q |
25 |
agagcagaggacagtttcatagccataagtggtgcaccttccccgcttgtgacagctgcaacaccagacatggttgtagcagtgagagtaatcatattta |
124 |
Q |
| |
|
|||||||| || ||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
8431496 |
agagcagaagatagtttcagagccaaaagtggtgcaacttccccacttgtgacagctgcaacaccagacatagtcttagcagtgagagtaatcatgttta |
8431595 |
T |
|
| Q |
125 |
ttgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagcttccaagactgcatagagttg |
224 |
Q |
| |
|
||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
8431596 |
ttgagttcaaaagaagattattccagttgttac---gttcgccaatgttgtgatgcatttctattctgtctgatacagcttctaaaactg--tagagttg |
8431690 |
T |
|
| Q |
225 |
aactgtagcattagaaattgtacaatgcttttgttgttgatcttgtaatattt |
277 |
Q |
| |
|
|| ||| || |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8431691 |
aattgtggctttagaatttgtagaatgcttttgttgttgatcttgtaatattt |
8431743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 330 - 511
Target Start/End: Original strand, 8431775 - 8431956
Alignment:
| Q |
330 |
ttttagttcctgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagctttgggagatggattgaagcattaattactctcttt |
429 |
Q |
| |
|
||||| ||| |||||| ||||||||||||| ||||| || ||| |||||||||||||| ||| ||||| |||| |||| ||||||||||||||||||| |
|
|
| T |
8431775 |
ttttaattcttgatcaacaacttgttttctggtttgaatagttggcaatgaaatatttgggagttttggaagattaattgcagcattaattactctcttt |
8431874 |
T |
|
| Q |
430 |
gaagatgatgataaagaacaagaaattggaactgaagtttgtaata---aagtcatgatatatatgaattaatattatttgaaga |
511 |
Q |
| |
|
||| |||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
8431875 |
gaa---gatgataaagaacaagaagttagaactgaagtttgtaatattgaagccatgatatatacaaattaataatatttgaaga |
8431956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 330 - 510
Target Start/End: Original strand, 8406694 - 8406874
Alignment:
| Q |
330 |
ttttagttcctgatcatcaacttgttttctagtttgtatctttgacaatgaaatatttgtgagctttgggagatggattgaagcattaattactctcttt |
429 |
Q |
| |
|
||||| ||| |||||| ||||||||||||| ||||| || ||| |||||||||||||| ||| ||||| |||| |||| ||| ||||||||||||||| |
|
|
| T |
8406694 |
ttttaattcttgatcaacaacttgttttctggtttgaatagttggcaatgaaatatttgggagttttggaagattaattgcagcgttaattactctcttt |
8406793 |
T |
|
| Q |
430 |
gaagatgatgataaagaacaagaaattggaactgaagtttgtaata---aagtcatgatatatatgaattaatattatttgaag |
510 |
Q |
| |
|
||| |||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| |
|
|
| T |
8406794 |
gaa---gatgataaagaacaagaagttagaactgaagtttgtaatattgaagccatgatatatacaaattaataatatttgaag |
8406874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 8417746 - 8417882
Alignment:
| Q |
82 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
181 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| || || || || || |||||| | ||||| ||||||||| |||| | |||||||||||||| |
|
|
| T |
8417746 |
gcaagaccagacatggttgtagcagtgagagtaatcatgttgatggaattcaagagaagagtgttccaattgttacgtagttcacaaatgttgtgatgca |
8417845 |
T |
|
| Q |
182 |
tttctattctgtctgatacagcttccaagactgcata |
218 |
Q |
| |
|
|||| |||||||| || ||| |||||||||||||||| |
|
|
| T |
8417846 |
tttcaattctgtcagaaacaacttccaagactgcata |
8417882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 8375475 - 8375339
Alignment:
| Q |
82 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| || || ||||| || |||||| | ||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
8375475 |
gcaacaccagacatggttgtagcagtaagagtaatcatgttgatggagttcaagagaagagtgttccaattgttacgctgttcgccaatgttttgatgca |
8375376 |
T |
|
| Q |
182 |
tttctattctgtctgatacagcttccaagactgcata |
218 |
Q |
| |
|
|||| | ||| || || || |||||||||| |||||| |
|
|
| T |
8375375 |
tttcaactctatcagaaactgcttccaagattgcata |
8375339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 8439628 - 8439764
Alignment:
| Q |
82 |
gcaacaccagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgca |
181 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| || || ||||| || |||||| | ||||| ||| |||| |||||||||||||| ||||||| |
|
|
| T |
8439628 |
gcaacaccagacatggttgtagcagtaagagtaatcatgttgatggagttcaagagaagagtgttccaattgctacgctgttcgccaatgttttgatgca |
8439727 |
T |
|
| Q |
182 |
tttctattctgtctgatacagcttccaagactgcata |
218 |
Q |
| |
|
|||| | ||| || || || |||||||||| |||||| |
|
|
| T |
8439728 |
tttcaactctatcagaaactgcttccaagattgcata |
8439764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 8368812 - 8368931
Alignment:
| Q |
106 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
205 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8368812 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8368911 |
T |
|
| Q |
206 |
ccaagactgcatagagttga |
225 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8368912 |
caagaattgcatagagttga |
8368931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 8400598 - 8400479
Alignment:
| Q |
106 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
205 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8400598 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8400499 |
T |
|
| Q |
206 |
ccaagactgcatagagttga |
225 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8400498 |
caagaattgcatagagttga |
8400479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 8422175 - 8422056
Alignment:
| Q |
106 |
gtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctattctgtctgatacagctt |
205 |
Q |
| |
|
|||||||| ||||| || || |||||||||||||| ||||||| || | ||||||||||||||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
8422175 |
gtgagagtgatcatgttgatggagtttaatagaagggtattccaattatcgcgttgttcgccaatgttttgatgcatttctattctgtcggatacagatt |
8422076 |
T |
|
| Q |
206 |
ccaagactgcatagagttga |
225 |
Q |
| |
|
| | | ||||||||||||| |
|
|
| T |
8422075 |
caagaattgcatagagttga |
8422056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 8404470 - 8404604
Alignment:
| Q |
89 |
cagacatggttgtagcagtgagagtaatcatatttattgagtttaatagaagattattccagttgttacgttgttcgccaatgttgtgatgcatttctat |
188 |
Q |
| |
|
||||||| |||| ||| ||||| || ||||| || || |||||||||| ||| | ||||| |||| |||||||| || | ||| | ||||||||| || |
|
|
| T |
8404470 |
cagacattgttgaagctgtgagtgttatcatgttgatggagtttaataaaagcgtgttccaattgtcacgttgttgtcctaagtttttatgcatttcaat |
8404569 |
T |
|
| Q |
189 |
tctgtctgatacagcttccaagactgcatagagtt |
223 |
Q |
| |
|
||||||||||||||| ||| | | ||||||||||| |
|
|
| T |
8404570 |
tctgtctgatacagcctccgaaattgcatagagtt |
8404604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 762
Target Start/End: Complemental strand, 8378334 - 8378279
Alignment:
| Q |
708 |
ttcaaaattcccagccttgtcc-ttagtttgggtcacactcaacatacgacatagt |
762 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
8378334 |
ttcaaaattcgcagccttatcccttagtttgggtctcattcaacatacgacatagt |
8378279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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