View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16427_low_3 (Length: 650)
Name: NF16427_low_3
Description: NF16427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16427_low_3 |
 | |
|
| [»] chr3 (29 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 533; Significance: 0; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 5 - 650
Target Start/End: Complemental strand, 5160408 - 5159764
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctt |
104 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5160408 |
cagattcagaagccaccttcttaaccaaagtcgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggacgcttatctttgcctttctt |
5160309 |
T |
|
| Q |
105 |
atacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaa |
204 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||| ||||||||| |
|
|
| T |
5160308 |
atacggaagacgaagaactttaaagtcgtcataagcttcaataaactgattctcctcgctggtc---atgaagggaaccttgactgagct-ccattcaaa |
5160213 |
T |
|
| Q |
205 |
aggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctat |
304 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |
|
|
| T |
5160212 |
aggtgaaaatcatagtctttcgttttcgaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgagtctggttaacctat |
5160113 |
T |
|
| Q |
305 |
caactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat |
404 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5160112 |
caactgatcttagaggaagaagttctttaataaggccatttgtctctttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat |
5160013 |
T |
|
| Q |
405 |
atcaaatttaaaaatcaattatgcaaatagaacaaatagattctttttggaagtaattcaatagaagaaattatgctaaaggatcatgaaagtttatttg |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5160012 |
atcaaatttaaaaatcaattatgcaaatagaacaaatagattctttttggaagtaattcaatagaagaaattatgctaaaggatcatgaaagtttatttg |
5159913 |
T |
|
| Q |
505 |
aagaggcatttgaataacaaagttttgttattcaaaatagttttaccaatcaccaaagtcatgaagttgtac---taaaatataaagaaattcgtacctc |
601 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
5159912 |
aagaggcatttgaataacaaagttttgttattcaaaatagctttaccaatcaccaaagtaatgaagttgtaccatcaaaatataaagtaattcgtacctc |
5159813 |
T |
|
| Q |
602 |
caaatatacaagatggacatacattataactatgaccactttgtgctta |
650 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5159812 |
caaatatacaagatggacatacattataactatgaccactttgtgctta |
5159764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 43 - 477
Target Start/End: Complemental strand, 5156341 - 5155916
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
5156341 |
ccatctttagcatttggaagaaaaatgtacatagagaatcgacgcttatctttgccttttttatacggaagacgaagaactttaaagccaccataagctt |
5156242 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5156241 |
caataaactgattctcctcgctggtc---atgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
5156145 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5156144 |
cttctcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
5156045 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaatagaacaaata |
442 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||| | |||||||||||||||| | | |||||||||||| |
|
|
| T |
5156044 |
tttgtctctttttcagcccataaattcccttctttagtcacttcaacagcctttaaaaccaaatcaaatttaaaaatccact------atagaacaaata |
5155951 |
T |
|
| Q |
443 |
gattctttttggaagtaattcaatagaagaaatta |
477 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| |
|
|
| T |
5155950 |
aattctttttggaagtatttcaatagaacaaatta |
5155916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 5 - 429
Target Start/End: Complemental strand, 46479924 - 46479503
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctt |
104 |
Q |
| |
|
||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||| |||| |||||| | |||| || ||||||||| ||||| ||| |
|
|
| T |
46479924 |
cagattcagaagccaccttttcgaccaaagctgccaacccatcttttgcatttggaagaaaaaagtacatggtgaattgacgcttatcttcgccttgctt |
46479825 |
T |
|
| Q |
105 |
atacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaa |
204 |
Q |
| |
|
||| ||||||| ||||||||||| | | | ||||| ||||||||||| ||| ||| |||||| ||||||||||||||||| | ||| ||||||||| |
|
|
| T |
46479824 |
ataaggaagaccgagaactttaaaaccatcaaaagctctaataaactgcttcttcttgctggtc---atgaagggaaccttgactgggctaccattcaaa |
46479728 |
T |
|
| Q |
205 |
aggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctat |
304 |
Q |
| |
|
|||||||| || ||||||| |||||| || |||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||| |||||| | | |
|
|
| T |
46479727 |
aggtgaaactcgtagtcttccgtttttgaagcatcaaacttatcattccacgctcctttgaagtatagtgcattggcaaagatgagccgggttgcattgt |
46479628 |
T |
|
| Q |
305 |
caactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat |
404 |
Q |
| |
|
|| || | |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || |||||||||| |||||| ||||| || |
|
|
| T |
46479627 |
tgaccgacccaagaggaagaagttctttaataaggccatttgtctctttttcagcccatgaattcacttcattggtcacttcaacagcctttaaaaccat |
46479528 |
T |
|
| Q |
405 |
atcaaatttaaaaatcaattatgca |
429 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
46479527 |
atcaaatttaaaaatcaattatgca |
46479503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 43 - 435
Target Start/End: Complemental strand, 46490805 - 46490417
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| ||| | ||||||||| ||||| |||||| ||||| | |||||||||||| || | ||||| |
|
|
| T |
46490805 |
ccatcttttgcatttggaagaaaaaagtacatagtaaattcacgcttatcttcgccttgcttataaggaaggccaagaactttaaaatcatcgaaagctc |
46490706 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
||||| | || ||||| || ||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
46490705 |
taatatattgttcttccttgctagtc---atgaagggaaccttaattgagctgccattcaaaaggtgaaaatcatagtctttcgtttttgaagcatcaaa |
46490609 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||||||| |||| ||||||| ||||| ||||||||||||| ||| || | ||||||||||| ||| || || | ||||||||||| |||||||| ||| |
|
|
| T |
46490608 |
cttatcattccacactcctttgaagtatagtgcattagcaatgattagcctggttaagctattaaccgacctggaaggaagaagttgtttaataatacca |
46490509 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||| | ||||||| | ||||| ||||| |||||||| || |||||||||||| |||||||| |
|
|
| T |
46490508 |
tttgtct-ttttgcagcccataaattcacttctttggccacttcacttgcctttaaaaccatatcaaaattcaaaatcaattattcaaataga |
46490417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 233 - 435
Target Start/End: Complemental strand, 51943039 - 51942837
Alignment:
| Q |
233 |
aaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttcttt |
332 |
Q |
| |
|
||||||||||||| ||| ||||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
51943039 |
aaacatcaaacttctcattccatgctcctctaaagtacaacgcattagcaaagatgaggctagttaagctatcaactgatcctggaggaataagttcttt |
51942940 |
T |
|
| Q |
333 |
aataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaat |
432 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| |||||||| ||| |||||| ||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
51942939 |
aataaggccatttgtctctttttcaacccatatgttcacttccttacgcacttctggagcctaaaaaaccatatcaaatttaaaaatcaattatgcaaat |
51942840 |
T |
|
| Q |
433 |
aga |
435 |
Q |
| |
|
||| |
|
|
| T |
51942839 |
aga |
51942837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 5 - 433
Target Start/End: Complemental strand, 46474063 - 46473638
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctt |
104 |
Q |
| |
|
||||||||||||||||||| | ||||||| | | |||||||||||||||||||| |||| |||||||| ||| || ||||||||| ||||| ||| |
|
|
| T |
46474063 |
cagattcagaagccaccttttcaaccaaacttggaagcccatcttttgcatttggaagaaaaaagtacatagtgaaacgacgcttatcttcgccttgctt |
46473964 |
T |
|
| Q |
105 |
atacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaa |
204 |
Q |
| |
|
||| ||||||| |||||||||||| | | | ||||| ||||||||||| ||| || || | ||||| |||| |||||| || ||||||||||| | | |
|
|
| T |
46473963 |
ataaggaagaccaagaactttaaaaccatcaaaagctctaataaactgcttcttct---tgctagtcataaaggaaaccttaactgagctgccattgaga |
46473867 |
T |
|
| Q |
205 |
aggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctat |
304 |
Q |
| |
|
|||| ||||||||||||||| ||| | || |||||| ||| | | |||||| ||||||||| || | |||||||||||||| ||| | || |||| | | |
|
|
| T |
46473866 |
aggtaaaaatcatagtcttttgttgttgaagcatcaatcttctgattccatgatcctttaaaatacaatgcattagcaaagacgagtctggataagttgt |
46473767 |
T |
|
| Q |
305 |
caactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat |
404 |
Q |
| |
|
| ||| | | ||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||||| | | |||| || |
|
|
| T |
46473766 |
tgattgacccttgaggaagaatttctttaataagaccatttgtctctttttcagcccatatgttcacttcattggtcacttcaacaaacaataaaaagat |
46473667 |
T |
|
| Q |
405 |
atcaaatttaaaaatcaattatgcaaata |
433 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |
|
|
| T |
46473666 |
atcaaattttaaaattaattatgcaaata |
46473638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 43 - 433
Target Start/End: Complemental strand, 46498044 - 46497654
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| | ||| || |||| |||| ||||| |||||| ||||| | |||||||||||| || | || || |
|
|
| T |
46498044 |
ccatcttttgcatttggaagaaaaaagtacatcgtaaattgacgcttgtcttcgccttgcttataaggaaggccaagaactttaaaatcatcgaaatctc |
46497945 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
||||||||||| ||| || | ||||||||| |||||| || ||| | |||||||||||||||||||||||| | ||||||| | || ||||||| |
|
|
| T |
46497944 |
taataaactgcttcttctcatcactagtcatgaagtcaaccttaactgagtttccattcaaaaggtgaaaatcatagacattcgtttccgaagcatcaaa |
46497845 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
|||||| |||| ||||||||||||| |||||||||||||| || || | || ||| || || || | | ||||||||||||||||||||| ||| |
|
|
| T |
46497844 |
attatcattccactctcctttaaagtatagtgcattagcaaatattagctgagtaaagtagtcgaccgaccctaaaggaagaagttctttaataagacca |
46497745 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaata |
433 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || ||||||||| |||||| ||||| |||||||| | |||||||||||| |||||| |
|
|
| T |
46497744 |
tttgtctctctttcagcccataaattcacttcattgttcacttcaacagcctttaaaaccatatcaaaaattaaaatcaattatccaaata |
46497654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 6 - 388
Target Start/End: Original strand, 45883727 - 45884106
Alignment:
| Q |
6 |
agattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctta |
105 |
Q |
| |
|
|||||||||||||||||| | |||||||| |||| |||||||||||||||||||| |||| ||||||||||||| || |||||||| |||| || | |
|
|
| T |
45883727 |
agattcagaagccaccttctcgaccaaagctgacagtccatcttttgcatttggaagaaaaaagtacatagagaatcgacgcttatctccaccttgctca |
45883826 |
T |
|
| Q |
106 |
tacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaa |
205 |
Q |
| |
|
|| || | || ||| |||||||| | | | ||||| ||||||| || |||| || || | |||||||||||||| ||||| || || ||||| || |
|
|
| T |
45883827 |
taagggatacaaagcactttaaaaccatcaaaagctctaataaattg-atct--ttcttgctggtcatgaagggaactttgactgaactaccattatgaa |
45883923 |
T |
|
| Q |
206 |
ggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatc |
305 |
Q |
| |
|
|||||||| |||| ||| |||||| || ||||||| | | |||||||||| |||||||| | |||||||||||| ||||| | ||||||| | | |
|
|
| T |
45883924 |
tatgaaaatcgtagtattttgttttcgaaggatcaaacggttgattccatgctcccttaaagtacaatgcattagcaaatatgagtctggttaagttgtt |
45884023 |
T |
|
| Q |
306 |
aactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaa |
388 |
Q |
| |
|
|||||| | ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||| || || |||||||||| |
|
|
| T |
45884024 |
aactgaccctggagaaagaatttctttaataagaccatttgtctctttttcagcccataaattcacgtcattggtcacttcaa |
45884106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 169 - 388
Target Start/End: Original strand, 46526577 - 46526796
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaag- |
267 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||| ||| || || || |||||| | |||||||||||||||| |
|
|
| T |
46526577 |
gtcatgaagggaaccttgactgagctgccatttaaa-ggtgaaaatcatagttttttgttctcgaagcaggaaacttctttttccatgctcctttaaaaa |
46526675 |
T |
|
| Q |
268 |
tagagtgcattagcaaagatgaggcgggttaagctatcaactga-tcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaa |
366 |
Q |
| |
|
|| ||||| || ||||||||||| | |||||| ||| ||||| ||||| || |||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
46526676 |
tacagtgcgtttgcaaagatgagtctggttaatttattgactgaatcttg-agaaagaagttctctaataaggccatttgtctctttttcagcccataaa |
46526774 |
T |
|
| Q |
367 |
ttcacttctttagtcacttcaa |
388 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
46526775 |
ttcacttctttaatcacttcaa |
46526796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 169 - 416
Target Start/End: Complemental strand, 46544430 - 46544183
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagt |
268 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| | ||||| ||||||||||||||| ||||| || |||||||| || |||||||||||| |||| |
|
|
| T |
46544430 |
gtcatgaaaggaaccttgacttggctgccattgagaaggttaaaatcatagtcttttgtttttgaagtatcaaactcctccgaccatgctcctttgaagt |
46544331 |
T |
|
| Q |
269 |
agagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaatt |
368 |
Q |
| |
|
| ||||| || |||||||||||| ||||||||||||||| || || ||||| | ||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
46544330 |
atagtgcgtttgcaaagatgaggttggttaagctatcaaccgagtcaggtggaagtaaatcttttataagaccatttgtctctttttcagcccataaatt |
46544231 |
T |
|
| Q |
369 |
cacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaa |
416 |
Q |
| |
|
||||||||| || |||||| |||||| ||||||| ||||||| |||| |
|
|
| T |
46544230 |
cacttcttttctcccttcaaaagcctttaaaacaacatcaaatataaa |
46544183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 31 - 231
Target Start/End: Complemental strand, 51943998 - 51943801
Alignment:
| Q |
31 |
aaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagt |
130 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||| |||||||||||| | ||||||||| ||||||||||| |||||| ||||||||||||| | |
|
|
| T |
51943998 |
aaagctgacaacccatcttttgcatttggaagaaaaaaatacatagagaattggcgcttatcttcacctttcttataaggaagatgaagaactttaaaat |
51943899 |
T |
|
| Q |
131 |
cgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgtttt |
230 |
Q |
| |
|
| | |||| ||| |||||||||| ||| || ||| |||||||||||||||||||| ||||| ||||| | ||||||||||||||| ||||| ||||| |
|
|
| T |
51943898 |
catcataaacttcaataaactgcttcttattgctg---gtcatgaagggaaccttgactgagctaccatttagaaggtgaaaatcataatctttagtttt |
51943802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 230
Target Start/End: Complemental strand, 46484144 - 46483960
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| ||| || ||||||||| ||||| |||||| ||||||| |||||||||||| | | | ||||| |
|
|
| T |
46484144 |
ccatcttttgcatttggaagaaaaaagtacatagtgaaacgacgcttatcttcgccttgcttataaggaagaccaagaactttaaaaccatcaaaagctc |
46484045 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgtttt |
230 |
Q |
| |
|
||||||||||| ||| || || | ||||| |||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
46484044 |
taataaactgcttcttct---tgctagtcataaagggaaccttgactgagctgccattgagaaggtgaaaatcatagtcttttgtttt |
46483960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 47397615 - 47397740
Alignment:
| Q |
310 |
gatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||||||||| |||| ||||||||||| |||||||||| ||||||| |||||| ||| | ||||||| |
|
|
| T |
47397615 |
gatcttggaggaaaaatttctttaataaaaccatttgtctcatttttggcccataaatttacttctttagccacttcatcagcctttaaacccatatcaa |
47397714 |
T |
|
| Q |
410 |
atttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
|||||||||||| ||||||||||||| |
|
|
| T |
47397715 |
atttaaaaatcagttatgcaaataga |
47397740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 43 - 378
Target Start/End: Complemental strand, 45903050 - 45902718
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||||||||| || ||||||||| |||| || ||| ||||||||||| ||||| || | | || | |
|
|
| T |
45903050 |
ccatcttttgcttttggaagaaaaatatacatagagaattgacgcttatcttctccttgctcataaggaagacgaagtactttgaaaccatcgaaaacgc |
45902951 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
||||||||| ||| || |||||| ||||||||||||||||| ||||| ||||| | ||||| ||||| ||||| || || || || ||| ||| |
|
|
| T |
45902950 |
ggataaactgcctcttctcgctggtc---atgaagggaaccttgactgagctaccatttagaaggtaaaaattatagttttgtgtcctcgaagcatgaaa |
45902854 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||||| |||||||||||||||| || | ||| |||||||||||||| | |||||| | | || || | | || ||||| ||| |||||||||||| |
|
|
| T |
45902853 |
cttatttttccatgctcctttaaaatacaatgcgttagcaaagatgagtctggttaatttgttgaccgaccctcgataaagaaattcattaataaggcca |
45902754 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttcttta |
378 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||| |
|
|
| T |
45902753 |
tttgtctctttttcagcccataaattcactttttta |
45902718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 172 - 400
Target Start/End: Original strand, 46549142 - 46549370
Alignment:
| Q |
172 |
atgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtaga |
271 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||| ||| | | | || | || |||||| ||| |||||||||||| ||||| | |
|
|
| T |
46549142 |
atgaagggaaccttgaccgagctgccattgagaaggtgaaaatcatatccttccatgtccatagtattaaacttctcatcccatgctcctttgaagtata |
46549241 |
T |
|
| Q |
272 |
gtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcac |
371 |
Q |
| |
|
|||||| ||||||||||| | ||| ||| ||| | || | | ||||||| | ||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
46549242 |
atgcatttgcaaagatgagacaagttgagccatctatcgacccggctggaagaattgttttaataagaccatttgtctctttttcagcccataaattcac |
46549341 |
T |
|
| Q |
372 |
ttctttagtcacttcaatagccttcaaaa |
400 |
Q |
| |
|
|||||| | ||||||| | ||||| |||| |
|
|
| T |
46549342 |
ttctttggccacttcacttgcctttaaaa |
46549370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 46532045 - 46531754
Alignment:
| Q |
13 |
gaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaa |
112 |
Q |
| |
|
|||||||| || | || |||||| |||| ||||||| ||||| ||||| |||| ||||||||||||| || | |||| ||||||| |||||| |||| |
|
|
| T |
46532045 |
gaagccactttctcaatcaaagctaacaatccatcttgtgcatcgggaagaaaaaagtacatagagaattgacgaatatcgttgccttgcttataaggaa |
46531946 |
T |
|
| Q |
113 |
gacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaa |
212 |
Q |
| |
|
||||||| | ||||| | | | |||| || ||||||||| ||| ||| || ||| |||||||||||||| | ||||||||| | ||||||||| |
|
|
| T |
46531945 |
gacgaaggatcttaaaaccatcaaaagcatttataaactgcttcttcttgctagtc---atgaagggaaccttaattgagctgccaccgagaaggtgaaa |
46531849 |
T |
|
| Q |
213 |
atcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaa |
307 |
Q |
| |
|
||||| |||||| ||||| || ||||||| | | ||||||||| ||||||||||||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
46531848 |
atcatggtcttttgtttttgaagcatcaaatggttgatgccatgctccattaaagtagagtgcattagcaaaaatgagtccagttaagctatcaa |
46531754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 47414184 - 47414376
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctt |
104 |
Q |
| |
|
||||||||||||||||||| | ||||||||| |||| |||||| ||| |||||||| |||||||||||||||||| || |||||| ||||| || |
|
|
| T |
47414184 |
cagattcagaagccaccttctcaaccaaagctgacagtccatctcttgtgtttggaagaaaaatgtacatagagaatttccgcgtatcttctcctttatt |
47414283 |
T |
|
| Q |
105 |
atacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccatt |
200 |
Q |
| |
|
||| ||||| | |||||||||||| || | | ||||| |||||||||| |||| || | |||||||||||||||||||| ||||| ||||| |
|
|
| T |
47414284 |
ataaggaaggcaaagaactttaaaatcatcaaaagctccaataaactgcttctc---tccattggtcatgaagggaaccttgactgagcttccatt |
47414376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 46236791 - 46236909
Alignment:
| Q |
8 |
attcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttata |
107 |
Q |
| |
|
|||||||||||| ||| | |||||| | ||||| ||||||||||||| |||||| ||||| |||||||||||| || || ||||||||||| ||||| |
|
|
| T |
46236791 |
attcagaagccagcttctcaaccaaggttgacaacccatcttttgcatctggaagaaaaatatacatagagaattgacactcatctttgccttgattata |
46236890 |
T |
|
| Q |
108 |
cggaagacgaagaacttta |
126 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
46236891 |
aggaagataaagaacttta |
46236909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 46538958 - 46538897
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgtttt |
230 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| ||||| |
|
|
| T |
46538958 |
gtcatgaagggaaccttgactgagctgccattaagaaggttaaaatcatagtcttttgtttt |
46538897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 388
Target Start/End: Complemental strand, 16025454 - 16025235
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagt |
268 |
Q |
| |
|
|||||||||||||| |||| | ||||||||| || |||||||||||||||||| |||| | || ||||||||| | | ||| | |||||||||| |
|
|
| T |
16025454 |
gtcatgaagggaactttgattacgttgccattcagaatgtgaaaatcatagtcttttgtttccgaagcatcaaactgttgatcccacacccctttaaagt |
16025355 |
T |
|
| Q |
269 |
agagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaatt |
368 |
Q |
| |
|
| |||||||||||||| ||||| |||||| | | || || || ||| |||| ||| | |||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
16025354 |
aaagtgcattagcaaatatgagtttcgttaagttgttgacagaatctgaaggtagaatttcctcaataagaccatttgtctcctttttagcccataaatt |
16025255 |
T |
|
| Q |
369 |
cacttctttagtcacttcaa |
388 |
Q |
| |
|
||| || || |||||||||| |
|
|
| T |
16025254 |
cacatcatttgtcacttcaa |
16025235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 46538792 - 46538714
Alignment:
| Q |
334 |
ataaggccatttgtctcgtttt-cagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaat |
411 |
Q |
| |
|
|||||||||||||||| |||| ||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||| |
|
|
| T |
46538792 |
ataaggccatttgtcttttttttcagcccacaaattcacttcttttctcacttcaagtgcctttaaaacaatatcaaat |
46538714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 433
Target Start/End: Original strand, 4581745 - 4581838
Alignment:
| Q |
340 |
ccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaata |
433 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||||| ||| |||| |||||||| ||| ||||||| |
|
|
| T |
4581745 |
ccatttgtctctttttcagcccataaattcacttcttgaagcacttcggtagcctttaaaaccataaaaaatacaaaaatcagttaagcaaata |
4581838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 46526454 - 46526536
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaacttt |
125 |
Q |
| |
|
|||||| |||| ||||||| |||||||||||||||||| || ||||||||| |||| |||||| |||||||| || ||||| |
|
|
| T |
46526454 |
ccatctcttgctcttggaagaaaaatgtacatagagaattgacgcttatcttctccttgcttataaggaagacggagtacttt |
46526536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 46554343 - 46554477
Alignment:
| Q |
173 |
tgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagag |
272 |
Q |
| |
|
||||||||||||||| ||||| |||| | ||||||||||||||||||||| |||| || | |||||| | | |||||| |||||||| || || |
|
|
| T |
46554343 |
tgaagggaaccttgaatgagctaccatcaagaaggtgaaaatcatagtcttttgtttctgaagcgtcaaacggttgatgccatgcacctttaaaatatag |
46554442 |
T |
|
| Q |
273 |
tgcattagcaaagatgaggcgggttaagctatcaa |
307 |
Q |
| |
|
|||||||||||| ||||| | |||||| ||||||| |
|
|
| T |
46554443 |
tgcattagcaaaaatgagtctggttaaactatcaa |
46554477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 46236949 - 46237070
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagt |
268 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||| ||||||| | | ||| |||||||||| | || ||||||||| ||| ||||| ||||||||||| |
|
|
| T |
46236949 |
gtcatgaagggaactttgacggagctaccatttaaaaggtaacagtcactgtctttcgttaccgaagtatcaaacttctcattccatattcctttaaagt |
46237048 |
T |
|
| Q |
269 |
agagtgcattagcaaagatgag |
290 |
Q |
| |
|
| | |||||| ||||| ||||| |
|
|
| T |
46237049 |
acattgcatttgcaaatatgag |
46237070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 4614165 - 4614200
Alignment:
| Q |
343 |
tttgtctcgttttcagcccataaattcacttcttta |
378 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4614165 |
tttgtctctttttcagcccataaattcacttcttta |
4614200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 46549016 - 46549098
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaacttt |
125 |
Q |
| |
|
|||||||||| ||||||||| |||| ||||||||||||| | | |||||||| |||| ||||| |||||| ||||||||| |
|
|
| T |
46549016 |
ccatcttttgtatttggaagaaaaaagtacatagagaattgtcgtttatcttttccttatttataaggaagataaagaacttt |
46549098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 47397337 - 47397419
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaacttt |
125 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| | ||||||||| |||| | |||| | ||||||||| ||||| |
|
|
| T |
47397337 |
ccatcttttgcatttggaagaaaaatgtacatggagaaatggcgcttatcttcaccttgcctataagaaagacgaagtacttt |
47397419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 46554178 - 46554250
Alignment:
| Q |
8 |
attcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaa |
80 |
Q |
| |
|
|||| |||||||| || | || |||||| ||||| ||||||||||||| ||||| |||| |||||||||||| |
|
|
| T |
46554178 |
attccgaagccactttctcaatcaaagctgacaacccatcttttgcatcgggaagtaaaaagtacatagagaa |
46554250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 143; Significance: 9e-75; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 10 - 435
Target Start/End: Complemental strand, 35162567 - 35162146
Alignment:
| Q |
10 |
tcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacg |
109 |
Q |
| |
|
|||||||||||||| | ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||| |||| |||||| | |
|
|
| T |
35162567 |
tcagaagccaccttctcaaccaaagctgacaggccatcttttgcatttggaag-aaaatgtacatagagaatttccgctcatcttttccttgcttataag |
35162469 |
T |
|
| Q |
110 |
gaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtg |
209 |
Q |
| |
|
||||||||||||||||||| | | | ||||| |||||||||| ||| || ||| |||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
35162468 |
gaagacgaagaactttaaaaccatcaaaagctctaataaactg-atcaaggtt--ggtagtcatgaagggaaccttgactgagcttccattcagaaggtg |
35162372 |
T |
|
| Q |
210 |
aaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaact |
309 |
Q |
| |
|
||||||||||| || || | | ||| || |||||||||||||||||| || ||||| ||||||||||| || | ||||| | | || ||| |
|
|
| T |
35162371 |
aaaatcatagttttgtgtcgcatacttagaaaatgtactactccatgctcctttaaaatacagtgcgttagcaaagataagtctggttaggttgtcgact |
35162272 |
T |
|
| Q |
310 |
gatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
|| | | ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |
|
|
| T |
35162271 |
gacccttgaggaagaagttctttaataaggccatttgtttctttttcagcccataaattcacttctttagtcacttcaatagcctttaaaaccatgtcaa |
35162172 |
T |
|
| Q |
410 |
atttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
||||| |||||| | ||||||||||| |
|
|
| T |
35162171 |
atttacaaatcagtaatgcaaataga |
35162146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 8 - 475
Target Start/End: Complemental strand, 35155549 - 35155082
Alignment:
| Q |
8 |
attcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttata |
107 |
Q |
| |
|
|||||||||||||||| | ||||||||| || | |||||||||||||||||||| |||||||||||||||||| ||| |||||| |||| |||||| |
|
|
| T |
35155549 |
attcagaagccaccttctcaaccaaagctgatagtccatcttttgcatttggaagaaaaatgtacatagagaatttccgctcatcttttccttgcttata |
35155450 |
T |
|
| Q |
108 |
cggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaagg |
207 |
Q |
| |
|
||||||||||||||||||||| | | | ||||| ||||||| || || ||| | |||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
35155449 |
cggaagacgaagaactttaaaaccatcaaaagctctaataaattga---tcaaggctgctggtcatgaagggaaccttgactgagctgccattcagaagg |
35155353 |
T |
|
| Q |
208 |
tgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaa |
307 |
Q |
| |
|
||||||||||| | ||| || | | | |||| | | |||| ||||||||||| || |||||||||||||||||||| | ||||||| | | | |
|
|
| T |
35155352 |
tgaaaatcatatttttttgtcatacatctagaaaacggttgaatccaagctcctttaaaatacagtgcattagcaaagatgagtctggttaagttgttga |
35155253 |
T |
|
| Q |
308 |
ctga-tcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat-- |
404 |
Q |
| |
|
| || ||||| || || || || ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
35155252 |
ccgactcttg-agcaacaacttttttaataaggccatttgtctcttttttagcccataaattcacttctttagtcacttcaatagccttcaaaaccatgt |
35155154 |
T |
|
| Q |
405 |
--atcaaatttaaaaatcaattatgcaaatagaacaaatagattctttttggaagtaattcaatagaagaaat |
475 |
Q |
| |
|
|||||||||| |||||| |||||||| |||| ||| | ||||| || ||||| ||||||||||||||| |
|
|
| T |
35155153 |
caatcaaatttataaatcagttatgcaa-tagatcaattgaattctcttcacaagtatttcaatagaagaaat |
35155082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 178 - 435
Target Start/End: Complemental strand, 15555976 - 15555719
Alignment:
| Q |
178 |
ggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcat |
277 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||||||||||||||||||||||||| || |||||||||| | | |||| |||||||||||| ||||||| |
|
|
| T |
15555976 |
ggaaccttgagtgagctaccattgagaaggtgaaaatcatagtctttcgttttggaagcatcaaacttctgataccatagtcctttaaagtacagtgcat |
15555877 |
T |
|
| Q |
278 |
tagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttcttt |
377 |
Q |
| |
|
| ||||||||||| | ||||||||| | || || | ||| ||| || | |||||||||||||||||||||| |||||| ||||| |||| ||||| || |
|
|
| T |
15555876 |
ttgcaaagatgagtctggttaagctgttgaccgaccctggttgaataactcctttaataaggccatttgtctccttttcaacccatgaattgacttcatt |
15555777 |
T |
|
| Q |
378 |
agtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| ||||| |||||||||| |||| |
|
|
| T |
15555776 |
ggtcacttcaacagcctaaaatttcatatcaaatttcaaaataaattatgcaagtaga |
15555719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 433
Target Start/End: Original strand, 28286744 - 28286825
Alignment:
| Q |
352 |
ttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaata |
433 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||| | |||| |||| ||||||| | |||||||| ||||| ||||| |
|
|
| T |
28286744 |
ttttcagcccataaatttacttcttttgtcacttcaacaacctttgaaaccatatcaagtacaaaaatcagttatggaaata |
28286825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 15556146 - 15556070
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaat |
81 |
Q |
| |
|
||||||| ||||||||||| | |||||||||||| | ||||||||||||| |||||| | || ||| ||||||||| |
|
|
| T |
15556146 |
cagattctgaagccaccttttcaaccaaagccgagagtccatcttttgcatctggaagaataaagtagatagagaat |
15556070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 137; Significance: 3e-71; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 44 - 435
Target Start/End: Original strand, 9692748 - 9693135
Alignment:
| Q |
44 |
catcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagcttt |
143 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| | |||||| ||| |||| ||||| |||||||||||||||||||| | | | ||||| | |
|
|
| T |
9692748 |
catcttttgcatttggaagaaaaatgtacatagagaattgtcgcttattttttccttaattataaggaagacgaagaactttaaaaccatcaaaagctct |
9692847 |
T |
|
| Q |
144 |
aataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaac |
243 |
Q |
| |
|
||||||||| ||| || | | |||| || ||||||||||| |||||||||||| ||||||||||||||| || | || || || || ||| |
|
|
| T |
9692848 |
aataaactg-atcaaggtt--gctgctcataaaaggaaccttgactgagctgccattcggaaggtgaaaatcatattcgcttgtcctccaagcaggaaaa |
9692944 |
T |
|
| Q |
244 |
ttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccat |
343 |
Q |
| |
|
|| |||||||||||||||||| || | |||||||||||||||||| | ||||||||| |||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
9692945 |
ggattactccatgctcctttaaaatacaatgcattagcaaagatgagtctggttaagctgtcaactgacgcttgaggaagaatttctttaataaggccat |
9693044 |
T |
|
| Q |
344 |
ttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
9693045 |
atgtctctttttcagcccataaattcacttgtttagtcacttcaatagcctttaaaac-atatcaaatttaaaaatcagttatgcaaataga |
9693135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 8 - 435
Target Start/End: Original strand, 9675690 - 9676114
Alignment:
| Q |
8 |
attcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttata |
107 |
Q |
| |
|
|||||||||||||||| | ||||| |||||| | ||| |||||||||||||||| |||||||||||||||||| | |||||||| |||| || ||| |
|
|
| T |
9675690 |
attcagaagccaccttttcaaccatagccgatagtccaccttttgcatttggaagaaaaatgtacatagagaattgtcgcttatctccaccttgctcata |
9675789 |
T |
|
| Q |
108 |
cggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaagg |
207 |
Q |
| |
|
|| |||| ||| |||||||| | | | ||||| |||||||||| ||| || ||| |||| |||||||| ||||| ||||||||||||| |||| |
|
|
| T |
9675790 |
agggagacaaagcactttaaaaccatcaaaagctctaataaactg-atcaaggtt--ggtgctcataaagggaactttgactgagctgccattcagaagg |
9675886 |
T |
|
| Q |
208 |
tgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaa |
307 |
Q |
| |
|
||||||||||||| || || || || || ||| | |||| |||| |||||||||| || |||||||||||||||||||| | ||||||| | | | |
|
|
| T |
9675887 |
tgaaaatcatagttttcggtattataatcaaaaaattgatcaacccattctcctttaaaatatagtgcattagcaaagatgagtctggttaagttgttga |
9675986 |
T |
|
| Q |
308 |
ctgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatc |
407 |
Q |
| |
|
| || | | |||||||| ||||||||||||||| | ||| || |||||||||||||||||||| ||||||||||||||||||||||| || | |||||| |
|
|
| T |
9675987 |
ccgacccttcaggaagaatttctttaataaggccgtatgtttctttttcagcccataaattcacctctttagtcacttcaatagccttaaataaaatatc |
9676086 |
T |
|
| Q |
408 |
aaatttaaaaatcaattatgcaaataga |
435 |
Q |
| |
|
|||||||||||||| |||| |||||||| |
|
|
| T |
9676087 |
aaatttaaaaatcagttattcaaataga |
9676114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 257 - 410
Target Start/End: Original strand, 21464430 - 21464583
Alignment:
| Q |
257 |
ctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttc |
356 |
Q |
| |
|
||||||||||||| |||||||| ||||| || ||| |||||| |||| || ||| || ||||| || | ||| ||| | ||||||||||| ||||| |
|
|
| T |
21464430 |
ctcctttaaagtatagtgcatttgcaaatataaggttggttaaactattaaatgactcaggtggaagtagatttttgatatgaccatttgtctctttttc |
21464529 |
T |
|
| Q |
357 |
agcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaa |
410 |
Q |
| |
|
|||||||||||| |||||| ||| |||| | |||||| |||||||||||||| |
|
|
| T |
21464530 |
agcccataaatttgcttcttctgtcgcttcgagagcctttaaaacaatatcaaa |
21464583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21464182 - 21464304
Alignment:
| Q |
6 |
agattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctta |
105 |
Q |
| |
|
|||||| ||||| ||||| |||| |||||| |||| ||||||||||||| ||||| |||| ||| || |||||| || | || |||| |||| | || |
|
|
| T |
21464182 |
agattcggaagcaaccttcttaatcaaagctaacaatccatcttttgcatcaggaagaaaaaagtaaattgagaatcgatgtttgtcttcaccttgcgta |
21464281 |
T |
|
| Q |
106 |
tacggaagacgaagaactttaaa |
128 |
Q |
| |
|
|| ||||||||||| |||||||| |
|
|
| T |
21464282 |
taaggaagacgaaggactttaaa |
21464304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 43 - 401
Target Start/End: Complemental strand, 20359223 - 20358870
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
||||||||||| ||||| | ||||| |||||||||||| || || |||||| ||||| ||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
20359223 |
ccatcttttgcgtttggcaaaaaaatatacatagagaattgacgcgtatcttgaccttttttataaggaagacgaagaactttagaaccgtcataagctt |
20359124 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
|||||||||||||| ||| || | ||||| ||||||||||| ||| | ||||||||||| ||||||||| ||| | ||||| ||| || || |
|
|
| T |
20359123 |
caataaactgcatcttcttgcttacc---atgaaaggaaccttgactgagtttccattcaaaagatgaaaatcacagttct--gttttggaaaggtcgaa |
20359029 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||| ||| ||||||||||| ||||||| | ||||||||||||||||| || || | | |||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
20359028 |
cttctcattccatgctcctataaagtacaatgcattagcaaagatgacgctggctgatctatcaactggtcctcgaggaagaagttctttaataaggcca |
20358929 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaac |
401 |
Q |
| |
|
||||||| ||||||| |||||||||||||| ||| |||||||||| | |||||||||| |
|
|
| T |
20358928 |
attgtctctttttcagaccataaattcactttttttgtcacttcaacaaccttcaaaac |
20358870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 43 - 433
Target Start/End: Original strand, 20169061 - 20169448
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
||||||||||| ||||| | ||||| |||||||||||| || || |||||| ||||| ||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
20169061 |
ccatcttttgcgtttggcaaaaaaatatacatagagaattgacgcgtatcttgaccttttttataaggaagacgaagaactttagaaccgtcataagctt |
20169160 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
|||||| ||||||| ||| || | ||||| ||||||||||| ||| | ||||||||||| ||||||||| ||| || ||||| ||| || || |
|
|
| T |
20169161 |
caataaattgcatcttcttgcttacc---atgaaaggaaccttgactgagtttccattcaaaagatgaaaatcacagttttctgttttggaaaggtcgaa |
20169257 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||| ||| ||||||||||| ||||||| | ||||||||||||||||| || || | | |||||||| | || | |||||||||||||||||||||||||| |
|
|
| T |
20169258 |
cttctcattccatgctcctataaagtacaatgcattagcaaagatgacgctggctgatctatcaaccggtcctcgaggaagaagttctttaataaggcca |
20169357 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaaatttaaaaatcaattatgcaaata |
433 |
Q |
| |
|
||||||| ||||| | |||||||||||||| ||| |||||||||| | |||||||||| | ||||||| || ||||| |||||||||| |
|
|
| T |
20169358 |
attgtctctttttccgaccataaattcactttttttgtcacttcaacaaccttcaaaaccacatcaaatacaataatcagctatgcaaata |
20169448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 43 - 402
Target Start/End: Complemental strand, 20144713 - 20144357
Alignment:
| Q |
43 |
ccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttcttatacggaagacgaagaactttaaagtcgttataagctt |
142 |
Q |
| |
|
||||||||||| || || | ||||| |||||||||||| || || |||||| ||||| ||||| |||||||||||||||||| | ||| |||||||| |
|
|
| T |
20144713 |
ccatcttttgcgttaggcaaaaaaatatacatagagaattgacgcgtatcttgaccttttttataaggaagacgaagaactttagaaccgtcataagctt |
20144614 |
T |
|
| Q |
143 |
taataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaa |
242 |
Q |
| |
|
|||||||||||||| ||| || | ||||| ||||||||||| ||| | ||||||||||| ||||||||| || || ||||| ||| || || |
|
|
| T |
20144613 |
caataaactgcatcttcttgcttacc---atgaaaggaaccttgactgagtttccattcaaaagatgaaaatcactgttttctgtttttgaaaggtcgaa |
20144517 |
T |
|
| Q |
243 |
cttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggcca |
342 |
Q |
| |
|
||| ||| ||||||||||| ||||||| | ||||||||||||||||| || || | | |||||||||| || | |||||||||||||||||||||||||| |
|
|
| T |
20144516 |
cttctcattccatgctcctataaagtacaatgcattagcaaagatgacgctggctgatctatcaactggtcctcgaggaagaagttctttaataaggcca |
20144417 |
T |
|
| Q |
343 |
tttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaaca |
402 |
Q |
| |
|
||||||| ||||| | ||||| |||||||| ||| |||||||||| | |||| |||||| |
|
|
| T |
20144416 |
attgtctctttttccgaccatagattcactttttttgtcacttcaacaacctttaaaaca |
20144357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 20141802 - 20141841
Alignment:
| Q |
178 |
ggaaccttgaccgagctgccattcaaaaggtgaaaatcat |
217 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
20141802 |
ggaaccttgacggagcttccattcaaaaggtgaaaatcat |
20141841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 257 - 409
Target Start/End: Complemental strand, 16722035 - 16721883
Alignment:
| Q |
257 |
ctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttc |
356 |
Q |
| |
|
||||||| || || |||||||||||||||||||||||||||||||| | |||||| | || |||||||| | ||||||||| || |||||||| ||||| |
|
|
| T |
16722035 |
ctcctttgaaatatagtgcattagcaaagatgaggcgggttaagctgttaactgagccaggtggaagaagatttttaataagcccttttgtctccttttc |
16721936 |
T |
|
| Q |
357 |
agcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
|||||| ||||||||||||| |||||| |||||||||||||| |||||| |
|
|
| T |
16721935 |
agcccagaaattcacttcttctccaacttcattagccttcaaaacagtatcaa |
16721883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 257 - 409
Target Start/End: Complemental strand, 17699049 - 17698897
Alignment:
| Q |
257 |
ctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttc |
356 |
Q |
| |
|
||||||| || || |||||||||||||||||||||||||||||||| | |||||| | || |||||||| | ||||||||| || |||||||| ||||| |
|
|
| T |
17699049 |
ctcctttgaaatatagtgcattagcaaagatgaggcgggttaagctgttaactgagccaggtggaagaagatttttaataagcccttttgtctccttttc |
17698950 |
T |
|
| Q |
357 |
agcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
|||||| ||||||||||||| |||||| |||||||||||||| |||||| |
|
|
| T |
17698949 |
agcccagaaattcacttcttctccaacttcattagccttcaaaacagtatcaa |
17698897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 257 - 409
Target Start/End: Complemental strand, 17708158 - 17708006
Alignment:
| Q |
257 |
ctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttc |
356 |
Q |
| |
|
||||||| || || |||||||||||||| ||||||| ||||||||| |||||||| || | |||||||| | ||||||||| || |||||||| ||||| |
|
|
| T |
17708158 |
ctcctttgaaatatagtgcattagcaaatatgaggctggttaagctgtcaactgacctgtgtggaagaagatttttaataagcccttttgtctccttttc |
17708059 |
T |
|
| Q |
357 |
agcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| || |||||| |
|
|
| T |
17708058 |
agcccataaattcacttcttctctcacttcatcagccttcaaatcagtatcaa |
17708006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 169 - 373
Target Start/End: Complemental strand, 17745081 - 17744877
Alignment:
| Q |
169 |
gtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagt |
268 |
Q |
| |
|
||||| ||||||||||| || || |||| || | ||||| |||||||||||| |||||||| || ||||||||| | ||||| ||||||| |||| |
|
|
| T |
17745081 |
gtcataaagggaacctttactgacttgccgttaagaaggtcaaaatcatagtccttcgtttttgaagtatcaaacttttgtttccatactcctttgaagt |
17744982 |
T |
|
| Q |
269 |
agagtgcattagcaaagatgaggcgggttaagctatcaactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaatt |
368 |
Q |
| |
|
| ||||||||||||||||| |||| ||||||||| | |||||||| | |||||||| |||| |||||| || ||||||| ||||||||||||||||| |
|
|
| T |
17744981 |
atagtgcattagcaaagattaggctggttaagctgttaactgatccgtgtggaagaagatcttgaataagcccttttgtcttcttttcagcccataaatt |
17744882 |
T |
|
| Q |
369 |
cactt |
373 |
Q |
| |
|
||||| |
|
|
| T |
17744881 |
cactt |
17744877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 17736061 - 17735660
Alignment:
| Q |
5 |
cagattcagaagccaccttattaaccaaagccgacaagccatcttttgcatttggaaggaaaatgtacatagagaatggaagcttatctttgcctttctt |
104 |
Q |
| |
|
|||| |||||||| || |||| || |||||| ||||| ||||||||| | | ||||| |||| ||| |||||||||| | ||||||| ||||||| || |
|
|
| T |
17736061 |
cagaatcagaagctactttatcaatcaaagctgacaacccatctttttcgtcaggaagaaaaaagtaaatagagaatgcacgcttatcattgccttgttt |
17735962 |
T |
|
| Q |
105 |
atacggaagacgaagaactttaaagtcgttataagctttaataaactgcatctcctttctggtcgtcatgaagggaaccttgaccgagctgccattcaaa |
204 |
Q |
| |
|
|| ||||||| ||| |||||||| | | | ||| | |||||||| | | ||| |||||| || ||||||||||| || || ||||||| | | |
|
|
| T |
17735961 |
gtaaggaagaccaaggactttaaaaccatcaaaagaactgataaactgattattcttgctggtc---ataaagggaacctttactgacttgccattgaga |
17735865 |
T |
|
| Q |
205 |
aggtgaaaatcatagtctttcgttttcaaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaagatgaggcgggttaagctat |
304 |
Q |
| |
|
|||| |||||||||||| |||||||| || ||||||| |||| ||||||| ||||| |||||||| ||||||||||||| ||||||||| | |
|
|
| T |
17735864 |
aggtcaaaatcatagtccttcgtttttgaagtatcaaacggtcgtttccaaactcctttgaagtatagtgcattcgcaaagatgaggctggttaagctgt |
17735765 |
T |
|
| Q |
305 |
caactgatcttggaggaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaat |
404 |
Q |
| |
|
||||||| | | |||||||| || ||||||| || |||||||| || | ||||||||||||||||||||| |||||||| ||||| |||| || | |
|
|
| T |
17735764 |
caactgacccgcgtggaagaagatcattaataaacccctttgtctccttattagcccataaattcacttcttttatcacttcatcagcctgcaaaccagt |
17735665 |
T |
|
| Q |
405 |
atcaa |
409 |
Q |
| |
|
||||| |
|
|
| T |
17735664 |
atcaa |
17735660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 320 - 409
Target Start/End: Complemental strand, 17717919 - 17717830
Alignment:
| Q |
320 |
gaagaagttctttaataaggccatttgtctcgttttcagcccataaattcacttctttagtcacttcaatagccttcaaaacaatatcaa |
409 |
Q |
| |
|
||||||| | ||||||||| || |||||||| ||||||||||||| |||||||||||| |||||||| |||||||||| || |||||| |
|
|
| T |
17717919 |
gaagaagatttttaataagcccttttgtctccttttcagcccatacattcacttcttttctcacttcatcagccttcaaatcagtatcaa |
17717830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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