View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1642R-Insertion-15 (Length: 164)
Name: NF1642R-Insertion-15
Description: NF1642R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1642R-Insertion-15 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 3e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 3e-83
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 7296558 - 7296713
Alignment:
| Q |
9 |
actcaatcttggggttcaacatggtcttttatctttatgtccatagcaatttacattgtaacctctcttttactccaccttttattatctatctttcttt |
108 |
Q |
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| T |
7296558 |
actcaatcttggggttcaacatggtcttttatctttatgtccatagcaatttacattgtaacctctcttttactccaccttttattatctatctttcttt |
7296657 |
T |
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| Q |
109 |
gccataccaaacatattcctcttggccctttacctgcacttcattctctcaccgtg |
164 |
Q |
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| T |
7296658 |
gccataccaaacatattcctcttggccctttacctgcacttcattctctcaccgtg |
7296713 |
T |
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