View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1642R-Insertion-4 (Length: 1002)

Name: NF1642R-Insertion-4
Description: NF1642R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1642R-Insertion-4
NF1642R-Insertion-4
[»] chr2 (53 HSPs)
chr2 (493-856)||(27719718-27720081)
chr2 (194-495)||(41435501-41435801)
chr2 (194-494)||(21344974-21345270)
chr2 (194-495)||(39778542-39778845)
chr2 (194-497)||(11964151-11964439)
chr2 (194-484)||(10728196-10728486)
chr2 (194-495)||(13693422-13693722)
chr2 (248-494)||(7105608-7105853)
chr2 (199-496)||(42993696-42993994)
chr2 (194-443)||(10448719-10448967)
chr2 (188-495)||(25186934-25187239)
chr2 (194-496)||(19926678-19926978)
chr2 (199-487)||(36191475-36191763)
chr2 (201-500)||(10700111-10700410)
chr2 (9-177)||(27720099-27720268)
chr2 (194-378)||(22066384-22066568)
chr2 (194-496)||(28830958-28831259)
chr2 (405-496)||(22066289-22066380)
chr2 (194-332)||(41462666-41462805)
chr2 (393-496)||(41462832-41462935)
chr2 (711-765)||(9420132-9420186)
chr2 (702-775)||(11667069-11667142)
chr2 (711-765)||(24545795-24545849)
chr2 (711-765)||(41347452-41347506)
chr2 (699-768)||(9977782-9977851)
chr2 (711-768)||(15458820-15458877)
chr2 (711-763)||(21479096-21479148)
chr2 (702-765)||(30620471-30620534)
chr2 (702-765)||(30623092-30623155)
chr2 (702-765)||(31667378-31667441)
chr2 (711-757)||(7495474-7495520)
chr2 (711-765)||(34454048-34454102)
chr2 (702-763)||(30668776-30668837)
chr2 (700-768)||(37201516-37201583)
chr2 (712-768)||(43968339-43968394)
chr2 (711-765)||(14787075-14787129)
chr2 (711-765)||(21479281-21479335)
chr2 (715-765)||(36950494-36950544)
chr2 (705-763)||(39844362-39844420)
chr2 (719-765)||(43004795-43004841)
chr2 (711-756)||(40662982-40663027)
chr2 (711-756)||(40663055-40663099)
chr2 (711-763)||(932745-932797)
chr2 (711-763)||(40662901-40662953)
chr2 (711-763)||(43968711-43968763)
chr2 (712-763)||(30666203-30666254)
chr2 (711-757)||(645374-645420)
chr2 (711-765)||(38722726-38722780)
chr2 (721-763)||(44833304-44833346)
chr2 (712-765)||(42676341-42676394)
chr2 (464-494)||(10448965-10448995)
chr2 (711-768)||(34453627-34453684)
chr2 (711-768)||(43004424-43004481)
[»] chr4 (54 HSPs)
chr4 (194-494)||(43034023-43034322)
chr4 (194-494)||(30537524-30537823)
chr4 (194-494)||(50150212-50150509)
chr4 (194-499)||(26877163-26877470)
chr4 (194-494)||(782793-783093)
chr4 (194-494)||(3067729-3068026)
chr4 (194-497)||(36187319-36187622)
chr4 (194-494)||(27627753-27628052)
chr4 (194-495)||(25934341-25934647)
chr4 (393-495)||(22651745-22651847)
chr4 (250-460)||(33313287-33313503)
chr4 (706-768)||(7070640-7070702)
chr4 (711-772)||(12928425-12928486)
chr4 (702-765)||(7239055-7239118)
chr4 (711-765)||(29100711-29100765)
chr4 (711-765)||(54175710-54175764)
chr4 (711-765)||(9518898-9518952)
chr4 (711-765)||(41692308-41692362)
chr4 (711-768)||(16877054-16877111)
chr4 (704-765)||(39136197-39136258)
chr4 (711-763)||(660466-660518)
chr4 (711-763)||(13222071-13222123)
chr4 (712-768)||(17554908-17554964)
chr4 (711-763)||(24739219-24739271)
chr4 (699-763)||(27839130-27839194)
chr4 (701-757)||(49866970-49867026)
chr4 (712-763)||(42816128-42816179)
chr4 (284-376)||(56551485-56551573)
chr4 (711-765)||(660043-660097)
chr4 (701-763)||(41103878-41103940)
chr4 (711-749)||(42746930-42746968)
chr4 (711-763)||(16435943-16435995)
chr4 (721-773)||(29993569-29993621)
chr4 (728-772)||(42314582-42314626)
chr4 (712-756)||(53140136-53140180)
chr4 (722-765)||(45032369-45032412)
chr4 (711-765)||(5029139-5029193)
chr4 (711-765)||(19298682-19298736)
chr4 (711-765)||(36638739-36638793)
chr4 (711-757)||(43495700-43495746)
chr4 (711-765)||(54807012-54807066)
chr4 (711-768)||(1184395-1184452)
chr4 (722-763)||(11125146-11125187)
chr4 (711-768)||(32500136-32500193)
chr4 (711-768)||(36889834-36889891)
chr4 (713-757)||(28450674-28450718)
chr4 (717-768)||(39476299-39476348)
chr4 (711-754)||(2494254-2494297)
chr4 (714-757)||(2494742-2494785)
chr4 (405-472)||(29989964-29990031)
chr4 (720-763)||(50715573-50715616)
chr4 (711-757)||(44886061-44886107)
chr4 (700-742)||(49897539-49897581)
chr4 (727-764)||(36990201-36990238)
[»] chr7 (48 HSPs)
chr7 (194-494)||(24989714-24990013)
chr7 (248-494)||(7568072-7568317)
chr7 (242-496)||(18674552-18674805)
chr7 (257-495)||(45062519-45062756)
chr7 (198-494)||(23319869-23320165)
chr7 (259-495)||(41850906-41851142)
chr7 (194-494)||(48390213-48390513)
chr7 (194-500)||(48394049-48394354)
chr7 (194-370)||(8417659-8417835)
chr7 (393-479)||(8417896-8417982)
chr7 (711-765)||(1644408-1644462)
chr7 (704-765)||(22644696-22644757)
chr7 (704-768)||(29102544-29102608)
chr7 (711-765)||(24689214-24689268)
chr7 (702-768)||(33858159-33858225)
chr7 (711-763)||(35223674-35223726)
chr7 (711-765)||(15640424-15640478)
chr7 (702-768)||(15641154-15641220)
chr7 (711-765)||(47222672-47222726)
chr7 (711-763)||(10282633-10282685)
chr7 (711-763)||(30122070-30122122)
chr7 (721-768)||(10282841-10282888)
chr7 (701-768)||(30122249-30122316)
chr7 (712-762)||(4594660-4594710)
chr7 (699-765)||(23809098-23809164)
chr7 (713-763)||(32988467-32988517)
chr7 (711-764)||(4399534-4399587)
chr7 (711-768)||(28974816-28974873)
chr7 (700-765)||(44434847-44434912)
chr7 (288-344)||(965166-965222)
chr7 (711-763)||(11485843-11485895)
chr7 (711-763)||(23640908-23640960)
chr7 (711-763)||(24162327-24162379)
chr7 (700-756)||(45689688-45689744)
chr7 (706-768)||(35526775-35526838)
chr7 (711-765)||(1644769-1644823)
chr7 (712-765)||(26970594-26970648)
chr7 (715-765)||(29854560-29854610)
chr7 (719-768)||(10282986-10283035)
chr7 (720-765)||(12216852-12216897)
chr7 (716-768)||(19611022-19611073)
chr7 (717-768)||(37986157-37986206)
chr7 (711-765)||(15640242-15640296)
chr7 (711-765)||(35526354-35526407)
chr7 (721-775)||(45447733-45447787)
chr7 (715-752)||(1067210-1067247)
chr7 (711-768)||(26178190-26178247)
chr7 (722-763)||(38319868-38319909)
[»] chr3 (51 HSPs)
chr3 (194-496)||(54747991-54748292)
chr3 (194-494)||(26848053-26848352)
chr3 (194-494)||(25095895-25096179)
chr3 (194-497)||(35612908-35613212)
chr3 (248-494)||(48905527-48905772)
chr3 (194-497)||(50834007-50834309)
chr3 (194-497)||(50841544-50841846)
chr3 (194-496)||(46320434-46320736)
chr3 (194-495)||(23026176-23026479)
chr3 (248-479)||(9663814-9664041)
chr3 (194-494)||(22515639-22515941)
chr3 (259-495)||(20922665-20922901)
chr3 (196-384)||(25313366-25313555)
chr3 (196-497)||(49794858-49795149)
chr3 (421-494)||(30363802-30363875)
chr3 (711-765)||(12100937-12100991)
chr3 (425-491)||(25313559-25313625)
chr3 (711-765)||(26863185-26863239)
chr3 (711-765)||(54356143-54356197)
chr3 (705-765)||(11632932-11632992)
chr3 (711-765)||(7433758-7433812)
chr3 (711-765)||(23027649-23027703)
chr3 (712-765)||(21388578-21388631)
chr3 (450-494)||(9663769-9663813)
chr3 (711-763)||(54142889-54142941)
chr3 (704-767)||(44077906-44077969)
chr3 (703-765)||(10296964-10297026)
chr3 (711-765)||(34795198-34795252)
chr3 (711-765)||(40285200-40285254)
chr3 (711-765)||(44869120-44869174)
chr3 (711-768)||(4964556-4964613)
chr3 (700-768)||(16106181-16106249)
chr3 (290-366)||(33280340-33280416)
chr3 (703-765)||(8707885-8707947)
chr3 (703-765)||(9059772-9059834)
chr3 (711-765)||(10332869-10332923)
chr3 (711-765)||(21459486-21459540)
chr3 (711-765)||(24485753-24485807)
chr3 (723-765)||(26168046-26168088)
chr3 (722-768)||(52573220-52573266)
chr3 (292-337)||(31612861-31612906)
chr3 (712-757)||(33832703-33832748)
chr3 (702-765)||(3942733-3942796)
chr3 (711-765)||(10332975-10333030)
chr3 (711-762)||(23302073-23302124)
chr3 (714-757)||(40459866-40459909)
chr3 (703-765)||(10309600-10309662)
chr3 (703-745)||(30498613-30498655)
chr3 (706-764)||(45585963-45586021)
chr3 (716-754)||(46514887-46514925)
chr3 (464-497)||(48593261-48593294)
[»] chr8 (42 HSPs)
chr8 (194-495)||(13882086-13882385)
chr8 (191-495)||(8669732-8670034)
chr8 (203-496)||(29226286-29226577)
chr8 (194-494)||(32305708-32306008)
chr8 (199-486)||(8106899-8107185)
chr8 (200-482)||(37533773-37534055)
chr8 (201-485)||(35634693-35634977)
chr8 (259-496)||(42569968-42570206)
chr8 (393-494)||(45177496-45177598)
chr8 (699-765)||(4443837-4443903)
chr8 (269-366)||(36741715-36741815)
chr8 (711-765)||(6007546-6007600)
chr8 (711-768)||(27882610-27882667)
chr8 (711-768)||(28022790-28022847)
chr8 (712-765)||(35308302-35308355)
chr8 (711-765)||(15199604-15199658)
chr8 (711-765)||(17073144-17073198)
chr8 (711-765)||(17575072-17575126)
chr8 (711-765)||(27917424-27917478)
chr8 (711-765)||(27963843-27963897)
chr8 (704-761)||(5765537-5765593)
chr8 (243-378)||(17855397-17855533)
chr8 (711-763)||(33489493-33489545)
chr8 (702-765)||(1153828-1153891)
chr8 (712-763)||(5424638-5424689)
chr8 (714-768)||(339730-339784)
chr8 (723-765)||(5424259-5424301)
chr8 (711-768)||(27965828-27965885)
chr8 (705-765)||(35102735-35102795)
chr8 (706-757)||(5764750-5764801)
chr8 (704-765)||(11464653-11464714)
chr8 (721-757)||(27882075-27882111)
chr8 (721-757)||(28022256-28022292)
chr8 (718-754)||(28828531-28828567)
chr8 (721-768)||(7284986-7285033)
chr8 (711-742)||(40737293-40737324)
chr8 (405-470)||(27420124-27420190)
chr8 (405-482)||(42450369-42450447)
chr8 (712-746)||(45045553-45045587)
chr8 (711-768)||(16246861-16246918)
chr8 (723-756)||(28152350-28152383)
chr8 (702-763)||(40796333-40796394)
[»] chr6 (12 HSPs)
chr6 (194-495)||(1365645-1365946)
chr6 (194-494)||(24337909-24338205)
chr6 (201-484)||(7243319-7243602)
chr6 (699-763)||(26001411-26001475)
chr6 (711-765)||(7204969-7205023)
chr6 (701-768)||(14094216-14094283)
chr6 (714-759)||(891147-891192)
chr6 (711-768)||(24007044-24007101)
chr6 (711-755)||(20469483-20469527)
chr6 (711-765)||(33438539-33438593)
chr6 (715-768)||(22533609-22533662)
chr6 (702-768)||(21091878-21091943)
[»] chr5 (38 HSPs)
chr5 (194-496)||(40385125-40385430)
chr5 (194-495)||(33314329-33314629)
chr5 (196-494)||(41174553-41174851)
chr5 (197-497)||(3097438-3097741)
chr5 (194-495)||(24868467-24868768)
chr5 (194-384)||(21262900-21263090)
chr5 (393-495)||(21262494-21262596)
chr5 (259-380)||(4237918-4238039)
chr5 (700-768)||(38494357-38494425)
chr5 (711-768)||(20515450-20515507)
chr5 (699-763)||(35781245-35781309)
chr5 (711-765)||(2211397-2211451)
chr5 (711-765)||(35781771-35781825)
chr5 (700-765)||(28793866-28793931)
chr5 (711-768)||(35041919-35041976)
chr5 (711-768)||(36197553-36197610)
chr5 (712-768)||(34383255-34383311)
chr5 (711-765)||(1349529-1349583)
chr5 (699-765)||(38184154-38184220)
chr5 (699-765)||(38214137-38214203)
chr5 (711-765)||(40591185-40591239)
chr5 (704-768)||(30054629-30054693)
chr5 (713-765)||(35040861-35040913)
chr5 (702-765)||(35041684-35041747)
chr5 (711-761)||(5249225-5249275)
chr5 (711-763)||(18585569-18585621)
chr5 (717-764)||(27124265-27124312)
chr5 (706-757)||(35040565-35040616)
chr5 (712-766)||(10371558-10371612)
chr5 (242-369)||(2934905-2935034)
chr5 (711-764)||(35041320-35041373)
chr5 (347-435)||(4238151-4238237)
chr5 (718-757)||(4728029-4728068)
chr5 (713-768)||(6429652-6429707)
chr5 (721-768)||(19170428-19170475)
chr5 (711-765)||(25458332-25458386)
chr5 (711-765)||(35041465-35041519)
chr5 (724-765)||(19134645-19134686)
[»] chr1 (65 HSPs)
chr1 (194-495)||(16130404-16130707)
chr1 (194-496)||(5800329-5800629)
chr1 (189-495)||(1553712-1554023)
chr1 (208-484)||(35050208-35050483)
chr1 (194-495)||(16129850-16130157)
chr1 (194-494)||(30222693-30222992)
chr1 (194-495)||(27654606-27654905)
chr1 (194-496)||(40987959-40988261)
chr1 (194-495)||(45192466-45192765)
chr1 (193-427)||(27332899-27333132)
chr1 (276-496)||(27846418-27846638)
chr1 (194-503)||(34546650-34546958)
chr1 (260-496)||(4813644-4813878)
chr1 (308-488)||(35428415-35428598)
chr1 (245-459)||(36834287-36834495)
chr1 (197-374)||(9411731-9411909)
chr1 (259-469)||(23933236-23933446)
chr1 (193-497)||(13878943-13879236)
chr1 (347-494)||(35121301-35121446)
chr1 (194-316)||(35121171-35121293)
chr1 (421-494)||(9412283-9412356)
chr1 (704-765)||(33813425-33813486)
chr1 (704-765)||(33872895-33872956)
chr1 (287-489)||(11907972-11908172)
chr1 (711-765)||(6614424-6614478)
chr1 (711-765)||(47793195-47793249)
chr1 (700-765)||(6844325-6844390)
chr1 (704-765)||(33240946-33241007)
chr1 (702-763)||(42834765-42834826)
chr1 (700-765)||(47795798-47795863)
chr1 (717-768)||(42429472-42429523)
chr1 (711-765)||(33674853-33674907)
chr1 (714-768)||(43115119-43115173)
chr1 (711-765)||(47794758-47794812)
chr1 (704-765)||(43326121-43326182)
chr1 (705-765)||(11981580-11981640)
chr1 (711-763)||(43114633-43114685)
chr1 (712-764)||(47795749-47795801)
chr1 (700-763)||(39842656-39842718)
chr1 (711-757)||(6941241-6941287)
chr1 (711-765)||(10338322-10338376)
chr1 (711-765)||(24686063-24686117)
chr1 (711-765)||(47795658-47795712)
chr1 (713-757)||(10065983-10066027)
chr1 (711-763)||(49480392-49480444)
chr1 (713-768)||(8298421-8298476)
chr1 (711-757)||(11335822-11335868)
chr1 (711-757)||(11493841-11493887)
chr1 (700-742)||(12016764-12016806)
chr1 (711-765)||(45807860-45807914)
chr1 (711-765)||(49243654-49243708)
chr1 (711-768)||(6319181-6319238)
chr1 (711-763)||(47796643-47796695)
chr1 (712-759)||(20472684-20472731)
chr1 (712-759)||(20558817-20558864)
chr1 (707-754)||(23658945-23658992)
chr1 (716-763)||(26271825-26271872)
chr1 (711-765)||(52404339-52404394)
chr1 (713-763)||(45296923-45296973)
chr1 (702-768)||(46675856-46675922)
chr1 (724-765)||(6318792-6318833)
chr1 (726-763)||(7562023-7562060)
chr1 (721-762)||(35187751-35187792)
chr1 (714-771)||(45059239-45059296)
chr1 (711-768)||(47796712-47796769)
[»] scaffold0067 (1 HSPs)
scaffold0067 (194-496)||(6703-7007)
[»] scaffold0008 (1 HSPs)
scaffold0008 (194-496)||(258216-258509)
[»] scaffold0057 (2 HSPs)
scaffold0057 (260-495)||(30477-30711)
scaffold0057 (293-472)||(30741-30919)
[»] scaffold0224 (1 HSPs)
scaffold0224 (702-763)||(21846-21907)
[»] scaffold0006 (1 HSPs)
scaffold0006 (711-765)||(71532-71586)
[»] scaffold0016 (2 HSPs)
scaffold0016 (711-763)||(106224-106275)
scaffold0016 (711-755)||(205121-205165)


Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 493 - 856
Target Start/End: Complemental strand, 27720081 - 27719718
Alignment:
Q  493 tattttttgttcttaaagtgcggaaaataggcacgaacaagggctcttatgtgcttagagaacatgggaaagagcactaaacttatcacccacaaagcat 592  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27720081 tattttttgttcttaaagtgcggataataggcacgaacaagggctcttatgtgcttagagaatatgggaaggagcactaaacttatcacccacaaagcat 27719982  T
Q  593 gtgcttaacgannnnnnnnnnnnnnnacaaatgttgggataaggatgatcattataacacactatctcattgtcattcgtaacctaaagtgagtacttct 692  Q
    ||||||||| |               |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  27719981 gtgcttaacaatttttttatttttttacaaatgttgggataaggatgatcattataacacactaccccattgtcatttgtaacctaaagtgagtacttct 27719882  T
Q  693 atttacaattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattattttgtagtgactatacnnnnnnnnnnt 792  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||          |    
T  27719881 atttacaattaaggatcagtttgtcacggattaaaataaaagtgaatttgacattaaataatttaaagattattttgtagtgactatacaaaaaaaaaat 27719782  T
Q  793 ctatttggcctttatttatagtaataaaaatatattttttctaaacaaaattagtttgttgttt 856  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  27719781 ctatttggcctttatttatagtaataaaaatatatcttttcaaaacaaaattagtttgttgttt 27719718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 41435801 - 41435501
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||| ||||||||||||||||||||||||||||| ||||       ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41435801 tactcgctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataataagattgatcaagtttcaagtatgtttgaagctaaatt 41435702  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| |||        |    
T  41435701 tcatttgtgcccttattgattatgagatagaatattaaaagtaaataagttgatgaaataaagagtaattaatttaagggtattcat-gaaaaaaaatta 41435603  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  41435602 aatgtagaagtgtattaaatgaagatgactattttcaatgcattttcttggtgttgatgttttatgttttttgtttcttatataaaggaccggagggagt 41435503  T
Q  494 at 495  Q
    ||    
T  41435502 at 41435501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 21345270 - 21344974
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| |||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21345270 tacttcctccggtcctttttattagaaacaaaagtgagaatttttt-ggtcctttttataagaagattgatcaagtttcaagtatgtttgaagctaaatt 21345172  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||| ||||||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||        |    
T  21345171 tcatttgtgtccttattgattgtgagagaga--attaaaagtaagtaagttgatggaataaagagtaattaatttaagggtatttatagaattgtttt-a 21345075  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21345074 aatgtagaagtgtaataaatgaagatgactattttcaatgtatttttttggtcttgatgttttatgtcttttgtttcttgtataaaggactggagggagt 21344975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 39778845 - 39778542
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||||||||||| |||||||||||||||||||| | ||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  39778845 tactccctccggtcttttttattagaaacaaaagtgaaaatttttttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 39778746  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaa-nnnnnnn 391  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||            
T  39778745 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaagggtattcatggaatttttttt 39778646  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39778645 taaatgtagaggtgtattaaatgaagataactattttcaatgtatttccttggtcttgatgttttatgtcttttatttcttgtataaaggaccggaggga 39778546  T
Q  492 gtat 495  Q
    ||||    
T  39778545 gtat 39778542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 194 - 497
Target Start/End: Original strand, 11964151 - 11964439
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||||||||||||||||| |||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  11964151 tactccctccggtcctttctattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaagtttcaaatatgtttgaagctaaatt 11964250  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |    
T  11964251 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtattcatagaatttttt--a 11964348  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||||||||||||||||||           |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  11964349 aatgtagaagtgtattaaatgaagatgac-----------tattttcttggtgttgatgttt--tgtcttttgtttcttgtataaaggaccggagggagt 11964435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 194 - 484
Target Start/End: Complemental strand, 10728486 - 10728196
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  |||||  |||||||||||||||||||||||||||    
T  10728486 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaaatattgacaaagtttcaagtatgtttgaagctaaat 10728387  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||            
T  10728386 ttcatttatgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcat-gaatttttttt 10728288  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggacc 484  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  10728287 aaatgtagaggtgtattaactgaagataactattttcaatgtatttccttagtcttgatgttttatgtcttttgtttcttgtataaaggacc 10728196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 13693722 - 13693422
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||| ||||||||||||||||||||||||||||| ||||       ||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||    
T  13693722 tactctctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgaccaagtttcaagtatgtttaaagataaatt 13693623  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||| || ||||||| |||||||||||||| ||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| |||        |    
T  13693622 tcatttctgtccttatttattatgagagagaaaattaaaagtaaataagttagtggaataaagaggaattaatttaggggtattcat-gaatatttttta 13693524  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  13693523 aatatagaagtgtattaaatgaagatgactattttcaatgtatttccttgatcttgatgttttatgtcttttgtttcttgtataaaggaccgaagagagt 13693424  T
Q  494 at 495  Q
    ||    
T  13693423 at 13693422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 248 - 494
Target Start/End: Original strand, 7105608 - 7105853
Alignment:
Q  248 tttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttat 347  Q
    |||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  |    
T  7105608 tttataagaagattgaccaagtttcaagtatgcttgaaggtaaatttcatttgtgcccttatttattatgagagaaaatattaaaagtaagtaagttggt 7105707  T
Q  348 ggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtct 447  Q
    |||||||||||||||||||||| |||||||||| |||        |||||||||| |||||||||||||||||||||||||||||||||||  |||||||    
T  7105708 ggaataaagagtaattaatttaggggtattcat-gaaaaaaatttaaatgtagaaatgtattaaatgaagatgactattttcaatgtatttatttggtct 7105806  T
Q  448 tgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7105807 tgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 7105853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 199 - 496
Target Start/End: Complemental strand, 42993994 - 42993696
Alignment:
Q  199 cctccggtcctttttattagaaacaaaagtaagaannnnnnn-ggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcat 297  Q
    |||||||||||||||||||||||||||||| ||||        ||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||    
T  42993994 cctccggtcctttttattagaaacaaaagtgagaattttttttggtcctttttataagaagattgaccaaatttcaagtatgtttgaagataaatttcat 42993895  T
Q  298 ttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatg 397  Q
    |||||||||||||  ||||||||||||| ||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| | |        ||||     
T  42993894 ttgtgcccttatttgttatgagagagaaaattaaaagtaaataagttagtggaataaagaggaattaatttaggggtattcat-ggattttatttaaata 42993796  T
Q  398 tagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtc-ttttgtttcttgtataaaggaccggagggagtatt 496  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42993795 tagaagtgtattaaatgaagatgactattttcaatgtatttccttggtcttgatgttttatgtctttttgtttcttgtataaaggaccggagggagtatt 42993696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 194 - 443
Target Start/End: Original strand, 10448719 - 10448967
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  10448719 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctctttataagaagattgatcaagtttcaagtatgtttgaagttaaatt 10448818  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||        |    
T  10448819 tcatttgtgctcttattgattatgagagagaatattaaaagtaagtaagttgatggaataaatagtaattaatttaagggtattcatataactttttt-a 10448917  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttg 443  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10448918 aatgtagaagtgtattaaatgaagatgactattttcaatatattttcttg 10448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 188 - 495
Target Start/End: Original strand, 25186934 - 25187239
Alignment:
Q  188 atttattactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaag 286  Q
    ||||| ||||||| ||||||||||||||||||||||||||| | ||       |||| |||||||||| |  ||||| |||||||||||||||| |||||    
T  25186934 atttaatactccc-ccggtcctttttattagaaacaaaagtga-aatttttttggtcatttttataagaaatattgaccaagtttcaagtatgtctgaag 25187031  T
Q  287 ctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaann 386  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||| |||      
T  25187032 ctaaatttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaattaagagtaattaatttaaggatattcatggaatt 25187131  T
Q  387 nnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgg 486  Q
          ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |    
T  25187132 ttttt-aaatgtagaggtgtattaaatgaagataactattttcaatgtatttccttggtcctaatgttttatgtcttttgtttcttgtataaaggaccag 25187230  T
Q  487 agggagtat 495  Q
    |||||||||    
T  25187231 agggagtat 25187239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 194 - 496
Target Start/End: Complemental strand, 19926978 - 19926678
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| | |        ||||||||||||||| |  ||||| ||||||| ||||||||||||| ||||||    
T  19926978 tactccctccggtcctttttattagaaacaaaagtgaaattttttttggtcctttttataagaaatattgaccaagttttaagtatgtttgaaactaaat 19926879  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||| |||||||| | |||       |    
T  19926878 ttcatttgtgcccttatttattatgagaga--atattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattc-ttgaagaagaaaa 19926782  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||| ||||| ||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  19926781 aaaagtagaggtgtattaaatgaagataaatattttcaatgtatttccttggtcctgatgttttatggcttttgtttcttgtataaaggaccggagggag 19926682  T
Q  493 tatt 496  Q
    ||||    
T  19926681 tatt 19926678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 199 - 487
Target Start/End: Complemental strand, 36191763 - 36191475
Alignment:
Q  199 cctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttcat 297  Q
    |||||||||||||||||||||||||||||| |||        ||||||||||||||| |  |||||  ||||||||||||||||||||||||||||||||    
T  36191763 cctccggtcctttttattagaaacaaaagtgagattttttttggtcctttttataagaaatattgactaagtttcaagtatgtttgaagctaaatttcat 36191664  T
Q  298 ttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcat-agaannnnnnnaaaat 396  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| || |           ||||    
T  36191663 ttgtgcccttatttattatgagagagaatattaaaagtaagtaag-ttgtggaataaagagtaattaatttaggggtattaatgattttttttttgaaat 36191565  T
Q  397 gtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgga 487  Q
     |||| ||||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  36191564 atagaggtgtattaaataaagataactattttcaatgtattttcttggtcct-atgttttatgtcttttgtttcttgtataaaggaccgga 36191475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 201 - 500
Target Start/End: Complemental strand, 10700410 - 10700111
Alignment:
Q  201 tccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttcattt 299  Q
    |||| ||||||||||||||||||||||| ||||        ||| |||||||||| |  ||||| |||||||||||||||| ||||||||||||||||||    
T  10700410 tccgatcctttttattagaaacaaaagtgagaatttttttagtcttttttataagaaatattgaccaagtttcaagtatgtctgaagctaaatttcattt 10700311  T
Q  300 gtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgta 399  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||| |||        |||||||    
T  10700310 gtgcccttacttattatgagagagaatattaaaagtaaataagttggtggaataaagagtaattaatttaggggtattcatggaattttttt-aaatgta 10700212  T
Q  400 gaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagtattttt 499  Q
    || |||||||||||||| || |||||||||||||||||| ||||||| |||||||||| || ||||||||||| |||||| ||||||||||| || ||||    
T  10700211 gaggtgtattaaatgaaaataactattttcaatgtatttccttggtcctgatgttttacgttttttgtttcttatataaaagaccggagggaatagtttt 10700112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 27720268 - 27720099
Alignment:
Q  9 ccgacaatccacacatatataataattctaatttcatataaaactagagttaattaattaatcataaccttttgatatttattgtaatttgcacttattc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  27720268 ccgacaacccacacatatataataattctaatttcatataaaactagagttaattaattaatcataagtttttgatatttattgtaatatgcacttattc 27720169  T
Q  109 gttacactttggatgc-ttttatttgactcaaaactatgacatttatatcatattttaattatgttgtaa 177  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27720168 attacactttggatgctttttatttgactcaaaactatgacatttatatcatattttaattctgttgtaa 27720099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 194 - 378
Target Start/End: Complemental strand, 22066568 - 22066384
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||| ||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22066568 tactccctccgatcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaagtttcaagtatgtttaaagctaaatt 22066469  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattc 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  22066468 tcatttgtgcccttattgattatgagagagaatattaaaagtaagttagttgatggaataaaaagtaattaatttaagggtattc 22066384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 194 - 496
Target Start/End: Original strand, 28830958 - 28831259
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||| ||||| |||||||||||| |||||||||||       ||||||||||||||| |  ||||| ||| ||| |||||||||||||| |||||    
T  28830958 tacttcctctggtccattttattagaaataaaagtaagaatttttttggtcctttttataagaaatattgaccaaattttaagtatgtttgaagttaaat 28831057  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||| ||  || |||||||||||||||||||| ||||||||||   |       |    
T  28831058 ttcatttgtgtccttatttattatgagagaaaatattaaaagtaagtaaattggtgcaataaagagtaattaatttaggggtattcat--gattttttta 28831155  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||| ||||| ||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  28831156 aaacgtagaggtgtattaaatgaagataactattttcaatgtatttctttggtcctgatgttttatatcttttgtgtcttgtataaaggaccggagggag 28831255  T
Q  493 tatt 496  Q
    ||||    
T  28831256 tatt 28831259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 405 - 496
Target Start/End: Complemental strand, 22066380 - 22066289
Alignment:
Q  405 gtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagtatt 496  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22066380 gtattaaatgaagatgactattttcaatgtattttattgatgttgatgttttatgtcttttgtttcttgtataaaggacaggagggagtatt 22066289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 194 - 332
Target Start/End: Original strand, 41462666 - 41462805
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||||||| |||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||| || ||||||||||| |||||    
T  41462666 tactccctccagtcctttttattagaaacaaaagtgagaattttttaggtcctttttataagaaatattgaccaagttttaaatatgtttgaagttaaat 41462765  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaa 332  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  41462766 ttcatttgtgcccttatttattatgagagagaataataaa 41462805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 393 - 496
Target Start/End: Original strand, 41462832 - 41462935
Alignment:
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||| |||| ||||||||||||||||| || ||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  41462832 aaatatagaggtgtattaaatgaagattaccattttcaatatatttccttgatcttgatgttttatgtctgttgtttcttgtataaaggaccggaaggag 41462931  T
Q  493 tatt 496  Q
    ||||    
T  41462932 tatt 41462935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 9420132 - 9420186
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9420132 gtttgttacggattaaaataaaagtgattttgacattaaataatttgaagattat 9420186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 702 - 775
Target Start/End: Original strand, 11667069 - 11667142
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattattttgtagtga 775  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||| | |||||||||||||||    
T  11667069 taagggtccgtttgttacgaattaaaataaaagtgattttgtcataaaataatttagatattattttgtagtga 11667142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 24545849 - 24545795
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24545849 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 24545795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 41347506 - 41347452
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  41347506 gtttgttacggattaaaataaaagtcattttgacattaaataatttagagattat 41347452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 699 - 768
Target Start/End: Original strand, 9977782 - 9977851
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||| ||||| ||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9977782 aattatgggtctgtttgttgcagattaaaataaaagtgattttgacgttaaataatttagagattatttt 9977851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 15458820 - 15458877
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15458820 gtttgttatagattaaaataaaagtgattttgacattaaataatttagagattatttt 15458877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 21479096 - 21479148
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21479096 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 702 - 765
Target Start/End: Original strand, 30620471 - 30620534
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||| |||||||||||| |||||||| |||| |||||||||| |||||||    
T  30620471 taagggtcagtttgttacagattaaaataaatgtgattttcacataaaataatttagagattat 30620534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 702 - 765
Target Start/End: Original strand, 30623092 - 30623155
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||| |||||||||||| |||||||| |||| |||||||||| |||||||    
T  30623092 taagggtcagtttgttacagattaaaataaatgtgattttcacataaaataatttagagattat 30623155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 702 - 765
Target Start/End: Original strand, 31667378 - 31667441
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||    
T  31667378 taagggtccgtttgttaaggattaaaataaaagtgatttcgacataaaataatttagagattat 31667441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 757
Target Start/End: Original strand, 7495474 - 7495520
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7495474 gtttgttacggattaaaataaaagtgattttgacataaaataattta 7495520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 34454102 - 34454048
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  34454102 gtttgttacggattaaaataaaagtgattttaacataaaataatttagagattat 34454048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 702 - 763
Target Start/End: Original strand, 30668776 - 30668837
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||| |||| |||||||||||||||||||||||||| |||| |||||||||| |||||    
T  30668776 taagggtccgttttttacggattaaaataaaagtgattttcacataaaataatttagagatt 30668837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 700 - 768
Target Start/End: Original strand, 37201516 - 37201583
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| | |||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  37201516 attaagggcccgttttttacggattaaa-taaaagtgattttgacataaaataatttagagattatttt 37201583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 768
Target Start/End: Complemental strand, 43968394 - 43968339
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  43968394 tttgttacggattaaaataaaagt-attttgacataaaataatttagagattatttt 43968339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 14787075 - 14787129
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||| |||||||    
T  14787075 gtttgttactaattaaaataaaagtgattttgacataaaataatttagagattat 14787129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 21479281 - 21479335
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  21479281 gtttgttacggattaaaataaaattgattctgacataaaataatttagagattat 21479335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 715 - 765
Target Start/End: Complemental strand, 36950544 - 36950494
Alignment:
Q  715 gttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  36950544 gttacagattaaaataaaagtgattttgacataaaataatttagagattat 36950494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 705 - 763
Target Start/End: Complemental strand, 39844420 - 39844362
Alignment:
Q  705 gggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||| |||||||||||||||||||| ||||| ||||||||| |||||||||| |||||    
T  39844420 gggtccgtttgttacggattaaaatataagtggttttgacataaaataatttagagatt 39844362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 719 - 765
Target Start/End: Original strand, 43004795 - 43004841
Alignment:
Q  719 cggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  43004795 cggattaaaataaaagtgattttgacataaaataatttagagattat 43004841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 756
Target Start/End: Complemental strand, 40663027 - 40662982
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattt 756  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||    
T  40663027 gtttgttacggattagaataaaagtgattttgacataaaataattt 40662982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 756
Target Start/End: Complemental strand, 40663099 - 40663055
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattt 756  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  40663099 gtttgttacggat-aaaataaaagtgattttgacattaaataattt 40663055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 932797 - 932745
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||||||||||||||||||| | | | |||||||||||||||    
T  932797 gtttgttacggattaaaataaaagtgattttcatagtgaataatttaaagatt 932745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 40662953 - 40662901
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||| |||||||||||||||||||| ||||| |||| |||||    
T  40662953 gtttgttacggattagaataaaagtgattttgacataaaatagtttagagatt 40662901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 43968763 - 43968711
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||    
T  43968763 gtttgctacggattaaaataaaagtgattttcacataaaataatttagagatt 43968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 712 - 763
Target Start/End: Original strand, 30666203 - 30666254
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||| |||||    
T  30666203 tttgttacagattaaaataaaagtgattttcacataaaataatttagagatt 30666254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 757
Target Start/End: Complemental strand, 645420 - 645374
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  645420 gtttattatggattaaaataaaagtgattttgacataaaataattta 645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 38722726 - 38722780
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||| |||||||||||||||||| ||||||||| || |||||||||| |||||||    
T  38722726 gtttattacggattaaaataaaaatgattttgatataaaataatttagagattat 38722780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 721 - 763
Target Start/End: Complemental strand, 44833346 - 44833304
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  44833346 gattaaaataaaagtgattttgacatgaaataatttagagatt 44833304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 42676341 - 42676394
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| || ||||||||||||||||||||||| ||| |||||| |||||||    
T  42676341 tttgttacagaataaaataaaagtgattttgacataaaagaatttagagattat 42676394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 464 - 494
Target Start/End: Original strand, 10448965 - 10448995
Alignment:
Q  464 ttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||||||||||||||||    
T  10448965 ttgtttcttgtataaaggaccggagggagta 10448995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 34453627 - 34453684
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||| ||||||||||||||||||||   || |||||||||| ||| ||||||    
T  34453627 gtttgttacgtattaaaataaaagtgattttattataaaataatttagagactatttt 34453684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 43004481 - 43004424
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||  ||||||||| ||||||||||| | ||| ||||||||| ||||||||||    
T  43004481 gtttgttatagattaaaattaaagtgattttaaaattcaataatttagagattatttt 43004424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 43034322 - 43034023
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| |||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43034322 tactacctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaagtttcaaatatgtttgaagctaaatt 43034223  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |    
T  43034222 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtattcatagaattatttt-a 43034124  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  43034123 aatgtagaagtgtattaaatgaagatgactattttcaatgtaatttcttggtgttgatgttttatgttttttgtttcttgtataaaggaccggagggagt 43034024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 30537823 - 30537524
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||| |||||||| |||||||||||||| |||         |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  30537823 tactccctccgatcctttttgttagaaacaaaagtgagatttttttttgtcctttttataagaagattgaccaagtttcaagtatgtttgaagctaaatt 30537724  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||        |    
T  30537723 tcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcat-gaaaaattttta 30537625  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30537624 aatgtagaaatgtattaaatgaagatgactattttcaatgtatttccttgatcttgatgttttatgtcttttgtttcttgtataaaggaccggaggtagt 30537525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 50150509 - 50150212
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||  ||||       ||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  50150509 tactccctccggtcctttttattagaaacaaaagggagaatttttttggtcctttttataagaagattgatcaagttttaagtatgtttgaagctaaatt 50150410  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||         |    
T  50150409 tcatttgtgtccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaaaagtaattaatttaagggtattcctaga--gtttttta 50150312  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||| || || || ||||| |||||||||||||||||||||||| |||||| |||    
T  50150311 aatgtagaagcatattaaatgaagatgattattttcaatgtattttcttagttttaatatttta-gtcttttgtttcttgtataaaggagcggaggaagt 50150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 194 - 499
Target Start/End: Original strand, 26877163 - 26877470
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||| ||| ||||||||||||||||||||    
T  26877163 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaaatattgaccaaattttaagtatgtttgaagctaaat 26877262  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcat-agaannnnnnn 391  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |              
T  26877263 ttcatttgtgtccttatttattatgagatagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcatgatttttttttt 26877362  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     ||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26877363 taaatgtagaggtgtattaactgaagataactattttcaatgtatttccttggtcttgatgttttatatcttttgtttcttgtataaaggaccggaggga 26877462  T
Q  492 gtattttt 499  Q
    ||||||||    
T  26877463 gtattttt 26877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 782793 - 783093
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||||||||||||||||||||||||||||| | |         |||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  782793 tactacctccggtcctttttattagaaacaaaagtgatatttttttttgtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 782892  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||| |||            
T  782893 ttcttttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagaataattaatttaggggtattcatggaatatttttt 782992  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  782993 aaatgtagagatgtattaaat-aagataactattttcaatgtatttccttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 783091  T
Q  493 ta 494  Q
    ||    
T  783092 ta 783093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 3067729 - 3068026
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||||| ||||||||||||||||||||| |||||| ||||        |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  3067729 tactccatccggtcctttttattagaaa-aaaagtgagaattttttttgtcctttttataagaagattgaccaagtttcaagtatgtttgaagctaaatt 3067827  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||||||  | |||||||||  ||||||||||  ||||||||| |||        |    
T  3067828 tcatttgtgcccttatttattatgagagagaaaattaaaagtaaataagttagtagaataaagaagaattaatttagaggtattcat-gaatttttct-a 3067925  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3067926 aatgtagaagtgtattaaatgaagatgactattttcaatgtatttccttgatcttgatgttttatgtcttttgtttattgtataaaggaccggagggagt 3068025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 194 - 497
Target Start/End: Original strand, 36187319 - 36187622
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||||||||||||||||||||||||||||| |          ||||||||||||||| |  ||| | |||||||||||||| |||||||||||||    
T  36187319 tactacctccggtcctttttattagaaacaaaagtgaatttttttttggtcctttttataagaaatattaaccaagtttcaagtatatttgaagctaaat 36187418  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||| |||            
T  36187419 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagaataattaatttaggggtattcatggaatatttttt 36187518  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36187519 aaatgtagagatgtattaaat-aagataactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaagaccggagggag 36187617  T
Q  493 tattt 497  Q
    |||||    
T  36187618 tattt 36187622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 27627753 - 27628052
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||||||||||||||||||||||||||||||||   ||       | ||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  27627753 tactccctccggtcctttttattagaaacaaaagtggaaatttttttgatcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 27627852  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||  ||            
T  27627853 ttcatttgtgcccttatttattat--gagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcatgtaatttttttt 27627950  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||| | |||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| |||| ||||||    
T  27627951 aaatgtagaaatatattaaatgaagataactattttcaatgtatttccttgatcctgatgttttatgtcttttgtttcttgtataaagaaccgaagggag 27628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 25934341 - 25934647
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||| ||||||||||||||||||||||||||||| ||||        |||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  25934341 tactctctccggtcctttttattagaaacaaaagtgagaattttttttgtcctttttataagaagattgaccaagtttcaagtatgtttgaagataaatt 25934440  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcataga-------ann 386  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||| ||||||  |||||||||||| ||||||||| ||||||||||| ||              
T  25934441 tcatttgtgcccttatttattatgagagagaaaattaaaaataaataagttagtggaataaagaggaattaattt-agggtattcat-gatttttttttt 25934538  T
Q  387 nnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgg 486  Q
         ||||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| | |    
T  25934539 tttttaaaatatagaagtgtattaaatgaagatgactattttcaatgtatttctttagtcttgatgttttatgtcttttgtttcttgtataaaggatcag 25934638  T
Q  487 agggagtat 495  Q
    ||| |||||    
T  25934639 aggaagtat 25934647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 393 - 495
Target Start/End: Complemental strand, 22651847 - 22651745
Alignment:
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  22651847 aaatatagaagtgtattaaaagaagatgattattttcaatgtatttctttggtctcgatgttttatgtcttttgtttcttgtataaaggactggagggag 22651748  T
Q  493 tat 495  Q
    |||    
T  22651747 tat 22651745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 250 - 460
Target Start/End: Original strand, 33313287 - 33313503
Alignment:
Q  250 tataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatgg 349  Q
    |||||| ||||| | ||||||| || ||||||| ||  ||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||    
T  33313287 tataagaagattaaccaagttttaaatatgtttaaatataaattttatttgtgcccttatttattatgagagagaaaattaaaagtaaataagttagtgg 33313386  T
Q  350 aataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattt------tcttg 443  Q
    ||||||||  |||||||||| || |||||||  |         |||| || |||||||||||||||||||||||||||| |||||||||      |||||    
T  33313387 aataaagatgaattaatttatggatattcatgaatttttttttaaatataaaagtgtattaaatgaagatgactatttttaatgtatttctttggtcttg 33313486  T
Q  444 gtcttgatgttttatgt 460  Q
    |||||||||||||||||    
T  33313487 gtcttgatgttttatgt 33313503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 706 - 768
Target Start/End: Complemental strand, 7070702 - 7070640
Alignment:
Q  706 ggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  7070702 ggtccgtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattctttt 7070640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 711 - 772
Target Start/End: Original strand, 12928425 - 12928486
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattattttgtag 772  Q
    |||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  12928425 gtttgttacggattaaaataaaagtgattttgacgtaaaataatttagagattattttgtag 12928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 702 - 765
Target Start/End: Complemental strand, 7239118 - 7239055
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7239118 taagggcccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 7239055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 29100711 - 29100765
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  29100711 gtttgttacggattaaaataaaagtgattttgatataaaataatttaaagattat 29100765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 54175710 - 54175764
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  54175710 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 54175764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 9518898 - 9518952
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  9518898 gtttgttacggattaaaataaaagtgatttagacataaaataatttagagattat 9518952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 41692308 - 41692362
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  41692308 gtttgttacagattaaaataaaagtgattttgacataaaatactttaaagattat 41692362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 16877054 - 16877111
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||    
T  16877054 gtttgttacggattaaaataaaagtgattataacataaaataatttagagattatttt 16877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 704 - 765
Target Start/End: Complemental strand, 39136258 - 39136197
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||||||| |||||||||||||||||||||| || |||||||||| |||||||    
T  39136258 agggtctgtttgttacgaattaaaataaaagtgattttgagataaaataatttagagattat 39136197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 660466 - 660518
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  660466 gtttgttacggatttaaataaaagtgattttgacataaaataatttagagatt 660518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 13222071 - 13222123
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  13222071 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 13222123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 768
Target Start/End: Complemental strand, 17554964 - 17554908
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17554964 tttgttacatattaaaataaaagtgattttgatattgaataatttaaagattatttt 17554908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 24739271 - 24739219
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  24739271 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 24739219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 699 - 763
Target Start/End: Complemental strand, 27839194 - 27839130
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||| || ||||||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  27839194 aattaaggatccgtttgttacagattaaaataaaagagattttgacataaaataatttagagatt 27839130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 701 - 757
Target Start/End: Original strand, 49866970 - 49867026
Alignment:
Q  701 ttaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||    
T  49866970 ttaagggtccgtttgtcacggattagaataaaagtgattttgacataaaataattta 49867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 712 - 763
Target Start/End: Complemental strand, 42816179 - 42816128
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  42816179 tttgttacggattaaaataaaagtgattttgacgtaaaataatttagagatt 42816128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 56551573 - 56551485
Alignment:
Q  284 aagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtat 376  Q
    ||||||||||||||||||||||||| | ||||| |||||||||| |||    ||| |||||| |||||| ||||||||||||| || ||||||    
T  56551573 aagctaaatttcatttgtgcccttaattattattagagagaatactaa----aagcaagtttgtggaattaagagtaattaatataggggtat 56551485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 660043 - 660097
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||| |||||    
T  660043 gtttgttacggattaaaataaaagtgattttcacgtaaaataatttaaaaattat 660097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 701 - 763
Target Start/End: Original strand, 41103878 - 41103940
Alignment:
Q  701 ttaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||| |||| ||| ||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  41103878 ttaaaggtccgttcgttacggattaaaataaaagtgattttcacataaaataatttagagatt 41103940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 749
Target Start/End: Complemental strand, 42746968 - 42746930
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaa 749  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42746968 gtttgttacggattaaaataaaagtgattttgacattaa 42746930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 16435943 - 16435995
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||| |||||||||||||||||||| || |||||||||| |||||    
T  16435943 gtttgttacggactaaaataaaagtgattttgaaataaaataatttagagatt 16435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 773
Target Start/End: Complemental strand, 29993621 - 29993569
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagattattttgtagt 773  Q
    |||||||| |||||||||||||||||| ||||||||||||||| |||| ||||    
T  29993621 gattaaaacaaaagtgattttgacattgaataatttaaagattcttttttagt 29993569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 728 - 772
Target Start/End: Complemental strand, 42314626 - 42314582
Alignment:
Q  728 ataaaagtgattttgacattaaataatttaaagattattttgtag 772  Q
    |||||||||||||||||||||||||||||| | ||||||||||||    
T  42314626 ataaaagtgattttgacattaaataatttagaaattattttgtag 42314582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 756
Target Start/End: Original strand, 53140136 - 53140180
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataattt 756  Q
    |||||||||||||||||||||| |||||||||||| |||||||||    
T  53140136 tttgttacggattaaaataaaactgattttgacataaaataattt 53140180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 722 - 765
Target Start/End: Complemental strand, 45032412 - 45032369
Alignment:
Q  722 attaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  45032412 attaaaataaaagtgattttgacataaaataatttagagattat 45032369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 5029193 - 5029139
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||  |||||||||||||||||||||||| | |||||||||| |||||||    
T  5029193 gtttgttaaagattaaaataaaagtgattttgacgtaaaataatttagagattat 5029139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 19298736 - 19298682
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||  ||| ||| |||||| |||||||    
T  19298736 gtttgttacggattaaaataaaagtgatttttgcataaaagaatttagagattat 19298682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 36638793 - 36638739
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||||| |||||||    
T  36638793 gtttgttacagattaaaataaaaatgattttcacataaaataatttagagattat 36638739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 757
Target Start/End: Original strand, 43495700 - 43495746
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||    
T  43495700 gtttgttaaggattaaaataaaagtgattttcacataaaataattta 43495746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 54807066 - 54807012
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||    
T  54807066 gtttgttacaaattaaaataaaagtgattttgacataaaataagttagagattat 54807012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 1184452 - 1184395
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||| |  | |||||||| ||||||||||| ||||||||    
T  1184452 gtttgttacggattaaaataaaaatattattgacatttaataatttaaatattatttt 1184395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 763
Target Start/End: Original strand, 11125146 - 11125187
Alignment:
Q  722 attaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  11125146 attaaaataaaagtaattttgacattaaataatttagagatt 11125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 32500136 - 32500193
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||| |||| ||||||||||||||||||||| | || |||||||||| ||||||||||    
T  32500136 gtttattacagattaaaataaaagtgattttaatataaaataatttagagattatttt 32500193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 36889891 - 36889834
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||  ||||||||||||| |||||||| ||||||| ||||| ||||||||||    
T  36889891 gtttgttacaaattaaaataaaagcgattttgatattaaattatttagagattatttt 36889834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 713 - 757
Target Start/End: Original strand, 28450674 - 28450718
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||    
T  28450674 ttgttacgaattaaaataaaagtgattttgacattgaatagttta 28450718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 768
Target Start/End: Original strand, 39476299 - 39476348
Alignment:
Q  717 tacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  39476299 tacggattaaaataa--gtgattttgacattgaataatttagagattatttt 39476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 754
Target Start/End: Complemental strand, 2494297 - 2494254
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataat 754  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  2494297 gtttgttacgggttaaaataaaattgattttgacataaaataat 2494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 757
Target Start/End: Complemental strand, 2494785 - 2494742
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  2494785 tgttactgattaaaataaaagtaattttgatattaaataattta 2494742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 472
Target Start/End: Original strand, 29989964 - 29990031
Alignment:
Q  405 gtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttctt 472  Q
    |||||||||||| ||  ||||||||||| | |||  |||||||||||| ||||||| |||||||||||    
T  29989964 gtattaaatgaaaatagctattttcaatatttttcattggtcttgatggtttatgtattttgtttctt 29990031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 763
Target Start/End: Original strand, 50715573 - 50715616
Alignment:
Q  720 ggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||||| |||| |||||||||| |||||    
T  50715573 ggattaaaataaaagtgattttcacataaaataatttagagatt 50715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 757
Target Start/End: Original strand, 44886061 - 44886107
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    ||||||||||| ||||||||||||| ||||| |||| ||||||||||    
T  44886061 gtttgttacggcttaaaataaaagtaattttaacataaaataattta 44886107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 700 - 742
Target Start/End: Complemental strand, 49897581 - 49897539
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttg 742  Q
    |||||||||| |||||||||||||||||||| |||| ||||||    
T  49897581 attaagggtccgtttgttacggattaaaatagaagttattttg 49897539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 727 - 764
Target Start/End: Original strand, 36990201 - 36990238
Alignment:
Q  727 aataaaagtgattttgacattaaataatttaaagatta 764  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  36990201 aataaaaatgattttgacattgaataatttaaagatta 36990238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-117; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 24989714 - 24990013
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  24989714 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttattagaagattgatcaagtttcaagtatgtttgaagctaaatt 24989813  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |    
T  24989814 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtattcatagaattttttt-a 24989912  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||    
T  24989913 aatgtagaagtgtattaaatgaagatgactattttaaatgtattttcttggtattaatgttttatgtcttttgtttcttgtataaaagaccggaaggagt 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 248 - 494
Target Start/End: Complemental strand, 7568317 - 7568072
Alignment:
Q  248 tttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttat 347  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  |    
T  7568317 tttataagaagattgatcaagtttcaagtatgtttgaaggtaaatttcatttgtgcccttatttattatgaaagagaatattaaaagtaagtaagttggt 7568218  T
Q  348 ggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtct 447  Q
    |||||||||||||||||||||| |||||||||| |||        |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  7568217 ggaataaagagtaattaatttaggggtattcat-gaaatttttttaaatgtagaaatgtattaaatgaagatgactattttcaatgtatttccttggtct 7568119  T
Q  448 tgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7568118 tgatgttttatgtcttttgtttcttgtacaaaggaccggagggagta 7568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 242 - 496
Target Start/End: Original strand, 18674552 - 18674805
Alignment:
Q  242 gtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaa 341  Q
    |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||    
T  18674552 gtcctttttataagaaaattgaccaagtttcaagtatgtttgaagctaaatttcatttgtgcccttatttattataagagagaatattgaaaataagtaa 18674651  T
Q  342 gtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttct 441  Q
    |||  ||||||||||||||||||||||| |||||||||| |||        |||||||||| |||||||||||||||||||||| |||||||||||| ||    
T  18674652 gttggtggaataaagagtaattaatttaggggtattcat-gaaatttttttaaatgtagaaatgtattaaatgaagatgactatattcaatgtatttcct 18674750  T
Q  442 tggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagtatt 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18674751 tggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggtagtatt 18674805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 257 - 495
Target Start/End: Original strand, 45062519 - 45062756
Alignment:
Q  257 agattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaag 356  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||     
T  45062519 agattgatcaagtttcaaatatgtttaaagctaaatttcatctgtgcccttgttgattatgagagagaatattaaaagtaagtaagttgatggaataaaa 45062618  T
Q  357 agtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgtttt 456  Q
    ||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  45062619 agtaattaatttaagggtattcatagaattttttt-aaatgtaaaagtgtattaaatgaagatgactattttcaatgtattttcttgatgttgatgtttt 45062717  T
Q  457 atgtcttttgtttcttgtataaaggaccggagggagtat 495  Q
    |||||||||||||||||||||||||| | |||| |||||    
T  45062718 atgtcttttgtttcttgtataaaggatcagaggaagtat 45062756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 198 - 494
Target Start/End: Complemental strand, 23320165 - 23319869
Alignment:
Q  198 ccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttca 296  Q
    ||||||||| |||||||||| |||||||| | |||        |||| |||||||||| |  ||||| ||||||||||||||||||||||||||||||||    
T  23320165 ccctccggtactttttattaaaaacaaaaattagatttttgttggtcatttttataagaaatattgaccaagtttcaagtatgtttgaagctaaatttca 23320066  T
Q  297 tttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaat 396  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||        ||||    
T  23320065 tttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcatggaaatttttt-aaat 23319967  T
Q  397 gtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    ||||| |||||||||| |||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23319966 gtagaggtgtattaaacgaagataactattttcaatgtaattccttggtcctgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 23319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 259 - 495
Target Start/End: Complemental strand, 41851142 - 41850906
Alignment:
Q  259 attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagag 358  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  41851142 attgaccaagtttcaagtatgtttgaaactaaatttcatttgtacccttatttattatgagagagaatattaaaagtaagtgagttggtggaataaagag 41851043  T
Q  359 taattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttat 458  Q
    ||||||||||| ||||||||||| ||        ||||||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||    
T  41851042 taattaatttaggggtattcataaaaaaaaatttaaatgtagaggtgtattaaatgaagataacaattttcaatgtatttccttggtcctgatgttttat 41850943  T
Q  459 gtcttttgtttcttgtataaaggaccggagggagtat 495  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41850942 gtcttttgtttcttgtataaaggatcggagggagtat 41850906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 48390513 - 48390213
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataag-tagattgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||||||||||||||||||||||||||||| |            |||||||||||||  | ||||| ||||||||||||||||||||||||||||    
T  48390513 tactacctccggtcctttttattagaaacaaaagtgaattttttttttatcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 48390414  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||| |||||| | ||||||||||| |||||||||| |||            
T  48390413 ttcatttgtgtccttatttattatgagtgagaatattaaaagtaagtaagttgatgaaataaaaaataattaatttaggggtattcatggaatatttttt 48390314  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  |||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48390313 aaatgtagagatgtattaaat-aagataactattttcaatgtatttccttgatcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 48390215  T
Q  493 ta 494  Q
    ||    
T  48390214 ta 48390213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 194 - 500
Target Start/End: Complemental strand, 48394354 - 48394049
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| |           |||||||||||||| |  ||||| ||||||| ||||||||||||| ||||||    
T  48394354 tactccctccggtcctttttattagaaacaaaagtgaattttttttttgtcctttttataagaaatattgaccaagttttaagtatgtttgaaactaaat 48394255  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| ||||||| |||  ||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |  |        |    
T  48394254 ttcatttgtgcccttatttattatgaaaga--atattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcttgaagaagaagaa 48394157  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||| ||||| ||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  48394156 aaaagtagaggtgtattaaatgaagataaatattttcaatgtatttccttggtcctgatgttttatggcttttgtttcttgtataaaggatcggagggag 48394057  T
Q  493 tatttttt 500  Q
    ||| ||||    
T  48394056 tatgtttt 48394049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 194 - 370
Target Start/End: Original strand, 8417659 - 8417835
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| |||||||||||||||||||||||||||||| ||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8417659 tacttcctccggtcctttttattagaaacaaaagtgagaattttttttgtcctttttataagaagattgatcaagtttcaagtatgtttgaagctaaatt 8417758  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaa 370  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8417759 tcatttgtgcccttattaattatgagagataatattaaaagtaagtaagttgatggaataaagagtaattaatttaa 8417835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 8417896 - 8417982
Alignment:
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaa 479  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8417896 aaatgtagaagtgtattaaatgaatatgaatatttttaatgtattttcttggtgttgatgttttatgtcttttgtttcttgtataaa 8417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 1644408 - 1644462
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1644408 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattat 1644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 704 - 765
Target Start/End: Original strand, 22644696 - 22644757
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  22644696 agggtccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 22644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 704 - 768
Target Start/End: Original strand, 29102544 - 29102608
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||| ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  29102544 agggtccgtttgttacggattaaaataaaattgattttgacataaaataatttagagattatttt 29102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 24689214 - 24689268
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24689214 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 24689268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 702 - 768
Target Start/End: Complemental strand, 33858225 - 33858159
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  33858225 taagcgtccgtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatttt 33858159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 35223674 - 35223726
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  35223674 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 35223726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 15640424 - 15640478
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  15640424 gtttgttacagattaaaataaaagtgattttgacataaaataatttatagattat 15640478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 702 - 768
Target Start/End: Complemental strand, 15641220 - 15641154
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||| | ||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||    
T  15641220 taagggcctgtttgttacagtttaaaataaaagtgattttgacatcaaataatttagagattatttt 15641154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 47222726 - 47222672
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  47222726 gtttgttacggattaaaataaaagtgattttcacataaaataatttagagattat 47222672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 10282685 - 10282633
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  10282685 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 10282633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 30122122 - 30122070
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  30122122 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 30122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 721 - 768
Target Start/End: Complemental strand, 10282888 - 10282841
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  10282888 gattaaaataaaagtgattttgacattgaataatttagagattatttt 10282841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 701 - 768
Target Start/End: Original strand, 30122249 - 30122316
Alignment:
Q  701 ttaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| |||| ||||| | ||||||||    
T  30122249 ttaagggtccgtttgttacagattaaaataaaagtaattttgacataaaatcatttagaaattatttt 30122316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 712 - 762
Target Start/End: Complemental strand, 4594710 - 4594660
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagat 762  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  4594710 tttgttatggattaaaataaaagtgattttaacataaaataatttaaagat 4594660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 699 - 765
Target Start/End: Complemental strand, 23809164 - 23809098
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||  |||| |||| ||||||||||||||| |||||||||| |||||||||| |||||||    
T  23809164 aattaagggttcgtttcttacagattaaaataaaagttattttgacataaaataatttatagattat 23809098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 713 - 763
Target Start/End: Original strand, 32988467 - 32988517
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  32988467 ttgttatggattaaaataaaagtgattttgatattaaataatttagagatt 32988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 764
Target Start/End: Original strand, 4399534 - 4399587
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatta 764  Q
    |||||||||||||||||| |||||||||||||| || |||||||||| ||||||    
T  4399534 gtttgttacggattaaaacaaaagtgattttgatataaaataatttagagatta 4399587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 28974816 - 28974873
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||| | |||||||||| ||| |||||| ||||||||||    
T  28974816 gtttgttacggattaaaataaaattcattttgacataaaacaatttagagattatttt 28974873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 700 - 765
Target Start/End: Complemental strand, 44434912 - 44434847
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||  ||||||||||  ||||||||||||||||||||||||| ||||||| || |||||||    
T  44434912 attaagggctagtttgttacatattaaaataaaagtgattttgacataaaataatatagagattat 44434847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 965222 - 965166
Alignment:
Q  288 taaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtt 344  Q
    |||||||| ||||||  |||||| ||||||||| |||||||||||||||||||||||    
T  965222 taaatttcgtttgtgttcttatttattatgagaaagaatattaaaagtaagtaagtt 965166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 11485843 - 11485895
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||| |||||    
T  11485843 gtttgttaaggattaaaataaaagtgattttgacataaattaatttagagatt 11485895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 23640960 - 23640908
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||| |||||    
T  23640960 gtttgttgcagattaaaataaaagtgattttgacataaaataatttagagatt 23640908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 24162379 - 24162327
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||| |||||    
T  24162379 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagatt 24162327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 756
Target Start/End: Complemental strand, 45689744 - 45689688
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataattt 756  Q
    ||||||||||  |||||||| ||||||||||||||||||||||| ||| ||||||||    
T  45689744 attaagggtccatttgttacagattaaaataaaagtgattttgatattgaataattt 45689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 706 - 768
Target Start/End: Complemental strand, 35526838 - 35526775
Alignment:
Q  706 ggtcagtttgttacgg-attaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||| ||||||||||| |||||||||| | |||||||||||| |||||||||| ||||||||||    
T  35526838 ggtccgtttgttacgggattaaaataatactgattttgacataaaataatttatagattatttt 35526775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 1644823 - 1644769
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||| |||||||    
T  1644823 gtttgttacggattaaaataaaattgatttttatataaaataatttagagattat 1644769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 712 - 765
Target Start/End: Original strand, 26970594 - 26970648
Alignment:
Q  712 tttgttacggattaaaataaaagtgattt-tgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||| |||||||    
T  26970594 tttgttacggattaaaataaaagtgatttattacataaaataatttagagattat 26970648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 715 - 765
Target Start/End: Original strand, 29854560 - 29854610
Alignment:
Q  715 gttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  29854560 gttacagattaaaataaaagtaattttgacgtaaaataatttaaagattat 29854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 10282986 - 10283035
Alignment:
Q  719 cggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||| ||||| ||||||||| | ||||||||    
T  10282986 cggattaaaataaaagtgattttcacattgaataatttataaattatttt 10283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 720 - 765
Target Start/End: Original strand, 12216852 - 12216897
Alignment:
Q  720 ggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||    
T  12216852 ggattaaaataaaagtgattttgatattgaataatttagagattat 12216897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 716 - 768
Target Start/End: Original strand, 19611022 - 19611073
Alignment:
Q  716 ttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||| |||||| ||||||||| |||||||||| ||||||||||    
T  19611022 ttacggattaaaat-aaagtggttttgacataaaataatttagagattatttt 19611073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 768
Target Start/End: Complemental strand, 37986206 - 37986157
Alignment:
Q  717 tacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  37986206 tacggattaaaataa--gtgattttgacattgaataatttagagattatttt 37986157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 15640242 - 15640296
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| ||||||||||||||||||||| || | |||||| ||| |||||||    
T  15640242 gtttgttacagattaaaataaaagtgattttcacgtaaaataaattagagattat 15640296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 35526354 - 35526407
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| ||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  35526354 gtttgtttcggattaaaataaaagtga-tttaacataaaataatttagagattat 35526407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 721 - 775
Target Start/End: Complemental strand, 45447787 - 45447733
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagattattttgtagtga 775  Q
    ||||||||||||||||||||| |||| ||||||| || ||||||| || ||||||    
T  45447787 gattaaaataaaagtgattttaacataaaataatctagagattatattttagtga 45447733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 752
Target Start/End: Complemental strand, 1067247 - 1067210
Alignment:
Q  715 gttacggattaaaataaaagtgattttgacattaaata 752  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  1067247 gttacggattaaaataaaagtgattttcacataaaata 1067210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 26178247 - 26178190
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| |||||||||||||||| ||||| || | |||| ||||| ||||||||||    
T  26178247 gtttgttatggattaaaataaaagtcattttcacgtaaaattatttatagattatttt 26178190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 722 - 763
Target Start/End: Original strand, 38319868 - 38319909
Alignment:
Q  722 attaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||| |||| |||||||||| |||||    
T  38319868 attaaaataaaagtgattttcacataaaataatttagagatt 38319909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 194 - 496
Target Start/End: Original strand, 54747991 - 54748292
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54747991 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaagtttcaagtatgtttgaagctaaatt 54748090  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||        |    
T  54748091 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaaattgatggaataaagagtaattaatttaagggtattcatataattttttt-a 54748189  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||    
T  54748190 aatgtagaagtgtattaaatgaagataactattttcaacgtattttcttggtgttgatgttttatgtcttttgtttattgtataaaggattggagggagt 54748289  T
Q  494 att 496  Q
    |||    
T  54748290 att 54748292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 26848352 - 26848053
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||||||||||||||||||||||| |||||||||| ||||       |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  26848352 tactccctccggtcctttttattataaacaaaagtgagaatttttttggtcatttttataagaagattgatcaagtttcaagtatgtttgaagctaaatt 26848253  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||        |    
T  26848252 tcttttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtgttcatagaattttttt-a 26848154  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  26848153 actgtagaagtgtattaaatgaagatgactattttcaatgtatttttttggtgttgatgttttatgtcttttgtttcttgtataaaagatcggagggagt 26848054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 25096179 - 25095895
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  25096179 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaaatttcaagtatgtttgaagctaaatt 25096080  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||                
T  25096079 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaaattgatggaataaagagtaattaatttaagggtattcata------------ 25095992  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
        ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25095991 ----tagaaatgtattaaatgaagatgactattttcaatgtattttcttggtgttgatgttttatgtcttttgtttcttgtataaaggatcggagggagt 25095896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 194 - 497
Target Start/End: Complemental strand, 35613212 - 35612908
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  35613212 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 35613113  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||| |||            
T  35613112 ttcatttgtgcccttatttattatgagagagaatattaaaagtaaataagttggtggaataaagagtaattaatttaggggtattcatggaatttttttt 35613013  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  35613012 aaatgtagaggtgtattaaatgaagataactattttcaatgtatttccttggtcctgatgttttatgtcttttatttcttgtataaaggactggagggag 35612913  T
Q  493 tattt 497  Q
    |||||    
T  35612912 tattt 35612908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 248 - 494
Target Start/End: Complemental strand, 48905772 - 48905527
Alignment:
Q  248 tttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttat 347  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |    
T  48905772 tttataagaagattgaccaagtttcaagtatgtttgaaggtaaatttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggt 48905673  T
Q  348 ggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtct 447  Q
    |||||||||||||||||||||| |||||||||| |||        |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  48905672 ggaataaagagtaattaatttaggggtattcat-gaaatttttttaaatgtagaaatgtattaaatgaagatgactattttcaatgtatttccttagtct 48905574  T
Q  448 tgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48905573 tgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 48905527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 194 - 497
Target Start/End: Original strand, 50834007 - 50834309
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||| ||||||||| ||||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  50834007 tactccctccggtcctttttattaggaacaaaagtgagaatttttttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 50834106  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| | |            
T  50834107 ttcatttgtgcccttacttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaagggtattcat-ggatttttttt 50834205  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  | |||||||||||||| |||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  50834206 aaatgtagagatatattaaatgaagataactattttcaatatatttccttagtcctgatgttttatgtcttttgtttcttgtataaaggatc-gagggag 50834304  T
Q  493 tattt 497  Q
    |||||    
T  50834305 tattt 50834309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 194 - 497
Target Start/End: Complemental strand, 50841846 - 50841544
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||| ||||||||| ||||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  50841846 tactccctccggtcctttttattaggaacaaaagtgagaatttttttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 50841747  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| | |            
T  50841746 ttcatttgtgcccttacttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaagggtattcat-ggatttttttt 50841648  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  | |||||||||||||| |||||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  50841647 aaatgtagagatatattaaatgaagataactattttcaatatatttccttagtcctgatgttttatgtcttttgtttcttgtataaaggatc-gagggag 50841549  T
Q  493 tattt 497  Q
    |||||    
T  50841548 tattt 50841544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 194 - 496
Target Start/End: Original strand, 46320434 - 46320736
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||| |||||||||||||| |||||    
T  46320434 tactccctccggtcctttttattagaaacaaaagtgagaattttttaggtcctttttataagaaatattgaccaagttttaagtatgtttgaagttaaat 46320533  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |||| || || |||            
T  46320534 ttcatttgtacccttatttattatgagagagaatattaaaagtaagtaagttggtgaaataaagagtaattaatttaggggtgttaatggaagtttctt- 46320632  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||| |||| |||||||||||||| || ||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46320633 aaatatagaggtgtattaaatgaatattactattttcaatgtatttctttggtcttgatgttttatgtctgttgtttcttgtataaaggaccggagggag 46320732  T
Q  493 tatt 496  Q
    ||||    
T  46320733 tatt 46320736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 23026479 - 23026176
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||||||||||||||||||||||||||||| ||||       |||| |||||||||| |  |||||| || |||||||||||||||||| |||||    
T  23026479 tacttcctccggtcctttttattagaaacaaaagtgagaatttttttggtcatttttataagaaatattgataaaatttcaagtatgtttgaagttaaat 23026380  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcat-agaannnnnnn 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||| |              
T  23026379 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggcattcatgatttttttttt 23026280  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     |||||||||  |||||||||||||||| ||||||||||||||||||  ||| || |||| |||||||||||||||||||||||||||||| ||||||||    
T  23026279 taaatgtagagatgtattaaatgaagataactattttcaatgtatttctttgatcctgatattttatgtcttttgtttcttgtataaaggatcggaggga 23026180  T
Q  492 gtat 495  Q
    ||||    
T  23026179 gtat 23026176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 248 - 479
Target Start/End: Complemental strand, 9664041 - 9663814
Alignment:
Q  248 tttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttat 347  Q
    |||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||  |    
T  9664041 tttataagaagattgaccaagtttcaag-atgtttgaaggtaaatttcatttgtgcccttatttattatgagaga--atattaaaagtaagtaagttggt 9663945  T
Q  348 ggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtct 447  Q
    |||||||||||||||||||||| |||||||||| |||        |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9663944 ggaataaagagtaattaatttaggggtattcat-gaaatttttttaaatgtagaaatgtattaaatgaagatgactattttcaatgtatttccttggtct 9663846  T
Q  448 tgatgttttatgtcttttgtttcttgtataaa 479  Q
    ||||||||||||||||||||||||||||||||    
T  9663845 tgatgttttatgtcttttgtttcttgtataaa 9663814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 22515639 - 22515941
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||| ||||||||||||||||||||| | | |        ||||||||||||||| |  ||||| |||||||||||||||| |||||||||||    
T  22515639 tactccctccgatcctttttattagaaacaaaactgaaattctttttggtcctttttataagaaatattgaccaagtttcaagtatgtctgaagctaaat 22515738  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||| || |||            
T  22515739 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaagaatatttatggaattttttt- 22515837  T
Q  393 aaatgta--gaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggg 490  Q
    |||||||  || ||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| | |||||    
T  22515838 aaatgtattgaggtgtattaaatgaagataactattttcaatgtatttccttagtcctgatgttttatgtcttttgtttcttgtataaaggatcagaggg 22515937  T
Q  491 agta 494  Q
    ||||    
T  22515938 agta 22515941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 259 - 495
Target Start/End: Complemental strand, 20922901 - 20922665
Alignment:
Q  259 attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagag 358  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||| |     
T  20922901 attgaccaagtttcaagtattcttgaagctaaatttcatttgtgctcttatttattatgagagagaatattaaaagtaagtaagttggtggaataaaaaa 20922802  T
Q  359 taattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttat 458  Q
    ||||||||||| || ||||||| ||         ||||||||| ||||||||||||||||| | |||||||||||||||| ||| ||| | |||||||||    
T  20922801 taattaatttagggatattcattgatttttttttaaatgtagaggtgtattaaatgaagataaatattttcaatgtatttccttagtcctaatgttttat 20922702  T
Q  459 gtcttttgtttcttgtataaaggaccggagggagtat 495  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20922701 gtcttttgttttttgtataaaggaccggagggagtat 20922665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 196 - 384
Target Start/End: Original strand, 25313366 - 25313555
Alignment:
Q  196 ctccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaattt 294  Q
    ||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  25313366 ctccctccggtcctttttattagaaacaaaagtgagaattttttgggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaattt 25313465  T
Q  295 catttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaa 384  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||    
T  25313466 catttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagaataattaatttaggggtattcatagaa 25313555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 196 - 497
Target Start/End: Complemental strand, 49795149 - 49794858
Alignment:
Q  196 ctccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtc--ctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||| ||||         |   ||||||||||| |  ||||||||||||||||||||||| ||||||||||    
T  49795149 ctccctccggtcctttttattagaaacaaaagtgagaatctttttttttttctttttataagaaatattgatcaagtttcaagtatgtt-gaagctaaat 49795051  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||||| | |||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| | |||||||||| |||            
T  49795050 ttcatttgtactcttatttattatgagagaaaatattaaaagtaagtaagttggtggaataaagagtaattaattaaggggtattcat-gaaaaaaaatt 49794952  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||||||||| ||||||||||||||||| ||||||||||           |||||||||||||||||||||||||||||||||||||| || || | ||||    
T  49794951 aaatgtagaggtgtattaaatgaagataactattttca-----------tggtcttgatgttttatgtcttttgtttcttgtataaatgatcgcaaggag 49794863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 30363875 - 30363802
Alignment:
Q  421 actattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  30363875 actattttcaatgtattttcttggtcctgatgttttatgtcttttgtttcttgtataaaggaccggagagagta 30363802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 12100937 - 12100991
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  12100937 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaaaattat 12100991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 25313559 - 25313625
Alignment:
Q  425 ttttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||||    
T  25313559 ttttaaatgtatttttttggtcctgatgttttatgtcttttgtttcttgtataaaagatcggaggga 25313625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 26863239 - 26863185
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26863239 gtttgttacggattaaaataaaagtgattttgacatcaaataatttagagattat 26863185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 54356143 - 54356197
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  54356143 gtttgttacggattaaagtaaaagtgattttgacattaaataatttagagattat 54356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 705 - 765
Target Start/End: Original strand, 11632932 - 11632992
Alignment:
Q  705 gggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  11632932 gggtctgtttgttacggatttaaataaaagtgattttgacataaaataatttagagattat 11632992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 7433812 - 7433758
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||    
T  7433812 gtttgttacggattaaaataaaagtaattttgacataaaataatttagagattat 7433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 23027649 - 23027703
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  23027649 gtttgttacgaattaaaataaaagtgattttgacataaaataatttagagattat 23027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 712 - 765
Target Start/End: Complemental strand, 21388631 - 21388578
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  21388631 tttgttacggattaaaatcaaagtgattttgacataaaataatttagagattat 21388578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 450 - 494
Target Start/End: Complemental strand, 9663813 - 9663769
Alignment:
Q  450 atgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  9663813 atgttttatgtcttttgtttcttgtataaaggatcggagggagta 9663769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 54142889 - 54142941
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  54142889 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 54142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 704 - 767
Target Start/End: Complemental strand, 44077969 - 44077906
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattattt 767  Q
    |||||| ||||||||||||||||||||||| |||||| ||||| ||||| |||| |||||||||    
T  44077969 agggtccgtttgttacggattaaaataaaaatgatttagacataaaatattttagagattattt 44077906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 703 - 765
Target Start/End: Original strand, 10296964 - 10297026
Alignment:
Q  703 aagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| |||||||||||||||||||||||| |||||| ||||  ||||||||| |||||||    
T  10296964 aagggtccgtttgttacggattaaaataaaagagatttttacatataataatttagagattat 10297026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 34795252 - 34795198
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||| |||||||    
T  34795252 gtttgttacggattaaaataaaagtaattttgacgtaaaataatttagagattat 34795198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 40285254 - 40285200
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||| |||||||    
T  40285254 gtttgttacggtttaaaataaaagtgattttgatataaaataatttagagattat 40285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 44869174 - 44869120
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||    
T  44869174 gtttgttatggagtaaaataaaagtgattttgacataaaataatttagagattat 44869120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 4964613 - 4964556
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||  ||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  4964613 gtttgttattgattaaaataaaaatgattttgatattgaataatttaaagattatttt 4964556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 700 - 768
Target Start/End: Complemental strand, 16106249 - 16106181
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| | |||||||| ||||||||||||||||||||||  ||| |||||||||| | ||||||||    
T  16106249 attaagggcccgtttgttatggattaaaataaaagtgatttttccataaaataatttagatattatttt 16106181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 366
Target Start/End: Complemental strand, 33280416 - 33280340
Alignment:
Q  290 aatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaat 366  Q
    |||||||||||||  |||||| |||| |||||||||||||||||||||||  |||  |||||| ||||||| |||||    
T  33280416 aatttcatttgtgttcttatttattacgagagagaatattaaaagtaagttggttattggaattaagagtagttaat 33280340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 703 - 765
Target Start/End: Original strand, 8707885 - 8707947
Alignment:
Q  703 aagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| |||||||||  ||||||| |||||||||||| |||| |||||||||| |||||||    
T  8707885 aagggtccgtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattat 8707947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 703 - 765
Target Start/End: Original strand, 9059772 - 9059834
Alignment:
Q  703 aagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| |||||||||  ||||||| |||||||||||| |||| |||||||||| |||||||    
T  9059772 aagggtccgtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattat 9059834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 10332923 - 10332869
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||| |||||||||||| | ||| |||||| |||||||    
T  10332923 gtttgttacggattaaaataacagtgattttgacctgaaacaatttagagattat 10332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 21459486 - 21459540
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||  |||||||||||||||||||| |||| |||||||||| |||||||    
T  21459486 gtttgttacatattaaaataaaagtgatttttacatcaaataatttagagattat 21459540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 24485807 - 24485753
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||  |||||||    
T  24485807 gtttgttacagattaatataaaagtgattttgacataaaataatttttagattat 24485753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 723 - 765
Target Start/End: Complemental strand, 26168088 - 26168046
Alignment:
Q  723 ttaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  26168088 ttaaaataaaagtgattttgacataaaataatttagagattat 26168046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 722 - 768
Target Start/End: Original strand, 52573220 - 52573266
Alignment:
Q  722 attaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  52573220 attaaaataaaagtgattttgatattgaataatttaaaaattatttt 52573266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 31612906 - 31612861
Alignment:
Q  292 tttcatttgtgcccttattgattatgagagagaatattaaaagtaa 337  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||    
T  31612906 tttcatctgtgtccttattcattatgagagagaatattaaaagtaa 31612861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 757
Target Start/End: Original strand, 33832703 - 33832748
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||    
T  33832703 tttgttacgaattaaaataaaagtgaatttgacataaaataattta 33832748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 765
Target Start/End: Complemental strand, 3942796 - 3942733
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| | |||||||| || ||||||| |||||||||||||| | |||||||||| |||||||    
T  3942796 taagggcccgtttgttatgggttaaaatgaaagtgattttgacttaaaataatttagagattat 3942733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 10332975 - 10333030
Alignment:
Q  711 gtttgttacggattaaaataaaagt-gattttgacattaaataatttaaagattat 765  Q
    |||||||||  |||||||||||||| ||||||||||| |||||||||| |||||||    
T  10332975 gtttgttacatattaaaataaaagttgattttgacataaaataatttagagattat 10333030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 762
Target Start/End: Complemental strand, 23302124 - 23302073
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagat 762  Q
    ||||||||||||||| ||||||| ||||||||| ||| ||||||||| ||||    
T  23302124 gtttgttacggattagaataaaaatgattttgagattcaataatttagagat 23302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 757
Target Start/End: Complemental strand, 40459909 - 40459866
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||| ||||||||||||| ||||||||||||| |||||||||    
T  40459909 tgttacagattaaaataaaaatgattttgacattgaataattta 40459866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 703 - 765
Target Start/End: Original strand, 10309600 - 10309662
Alignment:
Q  703 aagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| |||||||||| |||||||||||||  ||||| ||||  ||||||||| |||||||    
T  10309600 aagggtccgtttgttacgaattaaaataaaaggaatttttacatataataatttagagattat 10309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 703 - 745
Target Start/End: Complemental strand, 30498655 - 30498613
Alignment:
Q  703 aagggtcagtttgttacggattaaaataaaagtgattttgaca 745  Q
    |||||||  ||||||||| ||||||||||||||||||||||||    
T  30498655 aagggtcgatttgttacgaattaaaataaaagtgattttgaca 30498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 706 - 764
Target Start/End: Original strand, 45585963 - 45586021
Alignment:
Q  706 ggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatta 764  Q
    |||| ||||| ||| | ||||||||||||||||||| |||| |||||||||| ||||||    
T  45585963 ggtccgtttgctacagtttaaaataaaagtgatttttacataaaataatttagagatta 45586021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 716 - 754
Target Start/End: Original strand, 46514887 - 46514925
Alignment:
Q  716 ttacggattaaaataaaagtgattttgacattaaataat 754  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  46514887 ttacggattaaaataaaaatgattttgacataaaataat 46514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 464 - 497
Target Start/End: Original strand, 48593261 - 48593294
Alignment:
Q  464 ttgtttcttgtataaaggaccggagggagtattt 497  Q
    |||||||||||||| |||||||||||||||||||    
T  48593261 ttgtttcttgtatataggaccggagggagtattt 48593294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 13882086 - 13882385
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| ||||||||||||||||||||||| |||||| ||||       ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  13882086 tactacctccggtcctttttattagaaataaaagtgagaatttttttggtcctttttataagaagattgatcaagtttcaaatatgtttgaagctaaatt 13882185  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||        |    
T  13882186 tcatttgtgcccttattgattatgagagagaatatt-aaagtaagtaagttgatggaataaagagtaattaatttaagggtattcatagaattatttt-a 13882283  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||    
T  13882284 aatgtagaagtgtattaaatgaagatgactattttcaatgtaatttcttggtgttgatgttttatgttttttgtttcttgtataaaagaccggagggagt 13882383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 191 - 495
Target Start/End: Original strand, 8669732 - 8670034
Alignment:
Q  191 tattactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaa 290  Q
    ||||||||| ||||||||||||||||||||| |||||| |||        | ||||||||||||| |||||||||||||||||||||||||||||| |||    
T  8669732 tattactccttccggtcctttttattagaaataaaagtgagattttttttg-tcctttttataagaagattgatcaagtttcaagtatgtttgaagttaa 8669830  T
Q  291 atttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnn 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||          
T  8669831 atttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtattcata-aatttttt 8669929  T
Q  391 naaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggg 490  Q
      ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||     
T  8669930 ttaaatgtagaagtgtattaaatgaagatgactattttcaatgtatttttttggtgttgatgttttatgtcttttgtttcttttataaaggatcggaggt 8670029  T
Q  491 agtat 495  Q
    |||||    
T  8670030 agtat 8670034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 203 - 496
Target Start/End: Original strand, 29226286 - 29226577
Alignment:
Q  203 cggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtg 302  Q
    |||||||||||||||||||||||||| ||||       | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29226286 cggtcctttttattagaaacaaaagtgagaatttttttgttcctttttataagaagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtg 29226385  T
Q  303 cccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaa 402  Q
    || |||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||        ||||||||||    
T  29226386 cc-ttattgattatgaatgaaaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtattgatagaattttttt-aaatgtagaa 29226483  T
Q  403 gtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagtatt 496  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  29226484 gtgtattaaatgaagatgactattttcaatgtatttttttggtgttgatgttttatgtcttttgtttcttgtataaaggaccgtagggaatatt 29226577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 32305708 - 32306008
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||| |||||||||||||||||||||||||||||| | ||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  32305708 tactacctccggtcctttttattagaaacaaaagtgaaaatttttttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 32305807  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||| |||            
T  32305808 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagaataattaatttaggggtattcatggaatatttttt 32305907  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  |||||||||| ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32305908 aaatgtagagatgtattaaat-aagataactattttcaatgtatttctttagtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 32306006  T
Q  493 ta 494  Q
    ||    
T  32306007 ta 32306008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 199 - 486
Target Start/End: Original strand, 8106899 - 8107185
Alignment:
Q  199 cctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatt 298  Q
    |||||||||||||||||||||||||||| | ||||       | ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  8106899 cctccggtcctttttattagaaacaaaaatgagaatttttttgatcctttttataagaagattgaccaagtttcaagtatgtttgaaactaaatttcatt 8106998  T
Q  299 tgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgt 398  Q
    |||| ||||||| ||||||||| |||| ||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| |||        ||||||    
T  8106999 tgtgtccttatttattatgagatagaaaattaaaagtaaataagttagtggaataaagaggaattaatttaggggtattcat-gaattttttttaaatgt 8107097  T
Q  399 agaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgg 486  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8107098 agaagtgtattaaatgaagaggactattttcaatgtatttccttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgg 8107185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 200 - 482
Target Start/End: Original strand, 37533773 - 37534055
Alignment:
Q  200 ctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcattt 299  Q
    ||||| |||||||||||| |||||||||| ||||       | |||||||||| || |||||||||||||||||| ||| ||||||| |||||||| |||    
T  37533773 ctccgatcctttttattataaacaaaagtgagaatttttttgatcctttttattagaagattgatcaagtttcaaatatatttgaagttaaatttcgttt 37533872  T
Q  300 gtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgta 399  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||| ||        |||||||    
T  37533873 gtgcccttattgattatgagagagaatattaaaaataagtaagttgatggaataaagagtaattaatttaaatgtattcatataattttttttaaatgta 37533972  T
Q  400 gaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaagga 482  Q
    ||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  37533973 gaaatgtattaaatgaagatgactatttttaatgtattttcttgatgttgatgttttatgtcttttgtttcttgtataaagga 37534055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 201 - 485
Target Start/End: Complemental strand, 35634977 - 35634693
Alignment:
Q  201 tccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttcattt 299  Q
    ||||||| ||||||||| |||||||||| ||||        ||| |||||||||| |  ||||| |||||||||||||||||||||||||||||||||||    
T  35634977 tccggtcatttttattataaacaaaagtgagaattttttttgtcatttttataagaaatattgaccaagtttcaagtatgtttgaagctaaatttcattt 35634878  T
Q  300 gtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgta 399  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||| || ||||||| | |        |||||||    
T  35634877 gtgcccttatttattatgagagagaatattaaaagtaagtaagttggtgcgataaagagtaattaatttagggttattcat-ggattttttttaaatgta 35634779  T
Q  400 gaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccg 485  Q
     ||||||||||||||||||| ||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||    
T  35634778 aaagtgtattaaatgaagataactattttcaatgtatttctttggtactgatgttttatgtcttttgtttcttgtataaaggaccg 35634693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 259 - 496
Target Start/End: Original strand, 42569968 - 42570206
Alignment:
Q  259 attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagag 358  Q
    ||||| ||||||| ||||||  |||||||||||||| ||||||||  ||||| |||||||||||||||||||||| |||||||||| ||| |||||| ||    
T  42569968 attgaccaagttttaagtatcattgaagctaaattttatttgtgcatttatttattatgagagagaatattaaaaataagtaagttgatgaaataaatag 42570067  T
Q  359 taattaatttaagggtattcataga-annnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgtttta 457  Q
    ||||||||||| || ||||||||||          || |||| | ||||||||||||||||| ||||||||||||||||||  ||| || | ||||||||    
T  42570068 taattaatttagggatattcatagattttttttttaattgtaaaggtgtattaaatgaagataactattttcaatgtatttctttgatcctaatgtttta 42570167  T
Q  458 tgtcttttgtttcttgtataaaggaccggagggagtatt 496  Q
    |||||||| |||||| ||||||||| |||| ||||||||    
T  42570168 tgtcttttatttcttatataaaggatcggatggagtatt 42570206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 45177598 - 45177496
Alignment:
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgt-attttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  45177598 aaatgtagaagtgtattaaatgaagatgactattttcaatgttattttcttggtgttgatgttttatgtcttttgttttttgtataaaggatcggaggga 45177499  T
Q  492 gta 494  Q
    |||    
T  45177498 gta 45177496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 699 - 765
Target Start/End: Original strand, 4443837 - 4443903
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  4443837 aattaagggtccgtttgttacggattaaaataaaagtgattttgacataaaataatttatagattat 4443903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 269 - 366
Target Start/End: Complemental strand, 36741815 - 36741715
Alignment:
Q  269 tttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatga---gagagaatattaaaagtaagtaagtttatggaataaagagtaattaa 365  Q
    |||||| | |||| |||||||||||||||||||| ||||||| ||||| |   ||||||||||||||||||||||||||  |||||| ||||||||||||    
T  36741815 tttcaaatgtgttagaagctaaatttcatttgtgtccttatttattattattagagagaatattaaaagtaagtaagttagtggaattaagagtaattaa 36741716  T
Q  366 t 366  Q
    |    
T  36741715 t 36741715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 6007546 - 6007600
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  6007546 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 6007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 27882667 - 27882610
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  27882667 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattatttt 27882610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 28022847 - 28022790
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  28022847 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattatttt 28022790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 712 - 765
Target Start/End: Complemental strand, 35308355 - 35308302
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  35308355 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 35308302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 15199604 - 15199658
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  15199604 gtttattacggattaaaataaaagtgattttgacataaaataatttagagattat 15199658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 17073198 - 17073144
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  17073198 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattat 17073144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 17575072 - 17575126
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  17575072 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattat 17575126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 27917424 - 27917478
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  27917424 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagattat 27917478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 27963843 - 27963897
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  27963843 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagattat 27963897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 704 - 761
Target Start/End: Original strand, 5765537 - 5765593
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaaga 761  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  5765537 agggtccgtttgttacgaattaaaataaaagtgattttgaca-taaataatttaaaga 5765593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 17855397 - 17855533
Alignment:
Q  243 tcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaa 341  Q
    ||||||||||||| |  ||||| ||| ||| |||| |||| ||| |||||||||||||||  ||||||| || |||||| | | |||||||||||| |||    
T  17855397 tcctttttataagaaatattgaacaatttttaagtgtgttggaaactaaatttcatttgtatccttatttatgatgagaaatagtattaaaagtaattaa 17855496  T
Q  342 gtttatggaataaagagtaattaatttaagggtattc 378  Q
    ||| |||||   || ||||||||||||| ||||||||    
T  17855497 gttaatggaggcaatagtaattaatttaggggtattc 17855533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 33489545 - 33489493
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  33489545 gtttgttacgaattaaaataaaagtgattttgacattcaataatttagagatt 33489493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 702 - 765
Target Start/End: Complemental strand, 1153891 - 1153828
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| | ||||||||| ||||||||||||||||||||||| || |||||||||| |||||||    
T  1153891 taagggcccgtttgttacagattaaaataaaagtgattttgatataaaataatttagagattat 1153828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 712 - 763
Target Start/End: Complemental strand, 5424689 - 5424638
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  5424689 tttgttacggattaaaataaaagtgattttaacataaaataatttagagatt 5424638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 714 - 768
Target Start/End: Original strand, 339730 - 339784
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  339730 tgttatggattaaaataaaagtgattttgacatcgaataatttagagattatttt 339784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 723 - 765
Target Start/End: Original strand, 5424259 - 5424301
Alignment:
Q  723 ttaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  5424259 ttaaaataaaagtgattttgacataaaataatttaaagattat 5424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 27965885 - 27965828
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| || ||||||||||    
T  27965885 gtttattactgattaaaataaaagtgattttgacataaaataatatagagattatttt 27965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 765
Target Start/End: Complemental strand, 35102795 - 35102735
Alignment:
Q  705 gggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||| |||||||||  |||||||||||||||||||||| || |||||||||| |||||||    
T  35102795 gggtccgtttgttacatattaaaataaaagtgattttgatataaaataatttagagattat 35102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 706 - 757
Target Start/End: Original strand, 5764750 - 5764801
Alignment:
Q  706 ggtcagtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||| |||||||||  ||||||||||||||||||||||||| ||||||||||    
T  5764750 ggtctgtttgttacaaattaaaataaaagtgattttgacataaaataattta 5764801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 704 - 765
Target Start/End: Complemental strand, 11464714 - 11464653
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| ||||||||| ||||||||||||| ||||||||||   |||||||||| |||||||    
T  11464714 agggtccgtttgttacagattaaaataaaaatgattttgacgaaaaataatttagagattat 11464653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 721 - 757
Target Start/End: Original strand, 27882075 - 27882111
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27882075 gattaaaataaaagtgattttgacataaaataattta 27882111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 721 - 757
Target Start/End: Original strand, 28022256 - 28022292
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||||||||||||||||||| ||||||||||    
T  28022256 gattaaaataaaagtgattttgacataaaataattta 28022292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 718 - 754
Target Start/End: Complemental strand, 28828567 - 28828531
Alignment:
Q  718 acggattaaaataaaagtgattttgacattaaataat 754  Q
    ||||||||||||||||||||||||||||| |||||||    
T  28828567 acggattaaaataaaagtgattttgacataaaataat 28828531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 768
Target Start/End: Complemental strand, 7285033 - 7284986
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||||||||    
T  7285033 gattaagataaaagtgatttttacattgaataatttaaaaattatttt 7284986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 742
Target Start/End: Original strand, 40737293 - 40737324
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttg 742  Q
    ||||||||||||||||||||||||||||||||    
T  40737293 gtttgttacggattaaaataaaagtgattttg 40737324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 27420124 - 27420190
Alignment:
Q  405 gtattaaatgaaga-tgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttc 470  Q
    |||||||||||| | | |||||||||||||| |||  ||||||||||| |||||||| |||||||||    
T  27420124 gtattaaatgaaaaataactattttcaatgtttttcattggtcttgatattttatgtattttgtttc 27420190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 405 - 482
Target Start/End: Original strand, 42450369 - 42450447
Alignment:
Q  405 gtattaaatgaaga-tgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaagga 482  Q
    |||||||||||| | | |||||||||||||| |||  |||||||| ||| ||||||| ||||||||||| || ||||||    
T  42450369 gtattaaatgaaaaataactattttcaatgtttttcattggtcttaatggtttatgtattttgtttcttataaaaagga 42450447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 712 - 746
Target Start/End: Complemental strand, 45045587 - 45045553
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacat 746  Q
    |||||||||||||||||||||||| ||||||||||    
T  45045587 tttgttacggattaaaataaaagtaattttgacat 45045553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 16246918 - 16246861
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||| | |||||||||| | ||||||||||| ||||||||| ||| ||||||    
T  16246918 gtttgttacgtagtaaaataaaaattattttgacatttaataatttagagactatttt 16246861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 723 - 756
Target Start/End: Original strand, 28152350 - 28152383
Alignment:
Q  723 ttaaaataaaagtgattttgacattaaataattt 756  Q
    |||||||||||||||||||||||| |||||||||    
T  28152350 ttaaaataaaagtgattttgacatcaaataattt 28152383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 702 - 763
Target Start/End: Complemental strand, 40796394 - 40796333
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||| | ||| |||| ||||||||||||||||||| |||||||  ||||||||| |||||    
T  40796394 taagggcccgttcgttatggattaaaataaaagtgatcttgacatataataatttagagatt 40796333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-99; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 1365645 - 1365946
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  1365645 tactccctccggtcctttttattagaaacaaaagtgagaattttgttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 1365744  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||            
T  1365745 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaagggtattcatggaattttttgt 1365844  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||||||||  |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  1365845 aaatgtagagatgtattaaatgaagataactattttcaatgta-tttcttggtcctgatgtttcatgtcttttgtttcttgtataaaggaccggagagag 1365943  T
Q  493 tat 495  Q
    |||    
T  1365944 tat 1365946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 194 - 494
Target Start/End: Complemental strand, 24338205 - 24337909
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||| |||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  24338205 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcttttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 24338106  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||| |||            
T  24338105 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttagggttattcatggaattttttt- 24338007  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||||||||| |    |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  24338006 aaatgtagagg----ttaaatgaagataactattttcaatgtatttccttggtcctgatgttttatgtcttttatttcttgtataaaggaccggaaggag 24337911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 201 - 484
Target Start/End: Complemental strand, 7243602 - 7243319
Alignment:
Q  201 tccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttcattt 299  Q
    ||||||||||||||||| |||||||||| ||||       |||| |||||||||| |  ||||| |||||||||||||||||||||| ||||||||||||    
T  7243602 tccggtcctttttattataaacaaaagtgagaacttttttggtcttttttataagaaatattgaccaagtttcaagtatgtttgaagttaaatttcattt 7243503  T
Q  300 gtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgta 399  Q
    ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||| | |        |||||||    
T  7243502 gtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagaataattaatttaggggtattcat-ggattttttttaaatgta 7243404  T
Q  400 gaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggacc 484  Q
    || ||||||||||||||||| ||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||    
T  7243403 gaggtgtattaaatgaagataactattttcaatgtatttctttggtcctgatattttatgtcttttgtttcttgtataaaggacc 7243319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 699 - 763
Target Start/End: Complemental strand, 26001475 - 26001411
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  26001475 aattaagggtctgtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 26001411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 7205023 - 7204969
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7205023 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 7204969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 701 - 768
Target Start/End: Complemental strand, 14094283 - 14094216
Alignment:
Q  701 ttaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||  ||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14094283 ttaagggtccatttattgcggattaaaataaaagtgattttgacataaaataatttagagattatttt 14094216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 759
Target Start/End: Complemental strand, 891192 - 891147
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataatttaaa 759  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  891192 tgttacggattaaaataaaagtgattttcacataaaataatttaaa 891147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 24007044 - 24007101
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||| |||||| | ||| |||||||||| ||||||||||    
T  24007044 gtttgttacggattaaaataaaaatgatttggccataaaataatttagagattatttt 24007101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 755
Target Start/End: Complemental strand, 20469527 - 20469483
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatt 755  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  20469527 gtttgttatggattaaaataaaagtgattttgacataaaataatt 20469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 33438539 - 33438593
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||  |||||||    
T  33438539 gtttgtgacggattaaaataaaagtgattttgacacaaaataattttgagattat 33438593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 768
Target Start/End: Complemental strand, 22533662 - 22533609
Alignment:
Q  715 gttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| |||||||||||| | |||| ||| |||||||||||||||||||||    
T  22533662 gttacggaataaaataaaagttactttgccataaaataatttaaagattatttt 22533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 702 - 768
Target Start/End: Original strand, 21091878 - 21091943
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| |||| ||||  ||||||||||| ||||||||| | |||||||||||| ||||||||||    
T  21091878 taagggtccgttttttacatattaaaataaatgtgattttggc-ttaaataatttagagattatttt 21091943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 2e-95; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 194 - 496
Target Start/End: Complemental strand, 40385430 - 40385125
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtaga---ttgatcaagtttcaagtatgtttgaagctaa 290  Q
    |||| |||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||   |||| ||||||||||||||||||||||||||    
T  40385430 tacttcctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagaagattgaccaagtttcaagtatgtttgaagctaa 40385331  T
Q  291 atttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnn 390  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| ||           
T  40385330 atttcatttgtgcccttatttattatgagagagaaaattaaaagtaaataagttagtggaataaagaggaattaatttaggggtattcatggattatttt 40385231  T
Q  391 naaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggg 490  Q
      |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40385230 ttaaatgtagaagtgtattaaatgaagatgactattttcaatgtatatctttggtcttgatgttttatgtcttttgtttcttgtataaaggatcggaggg 40385131  T
Q  491 agtatt 496  Q
    ||||||    
T  40385130 agtatt 40385125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 33314329 - 33314629
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||||||||| ||||||||||||| |||||||||| |||        ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33314329 tactccctccagtcctttttattataaacaaaagtgagattatttttggtcctttttataagaagattgatcaagtttcaaatatgtttgaagctaaatt 33314428  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| |  ||||||| |||        |    
T  33314429 tcatttgtgccctcatttattatgagagagaatattaaaagtaagcaagttggtggaataaagagtaattaatttaggaatattcat-gaaattttttta 33314527  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    | ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  33314528 agtgtagaaatgtattaaatgaagatgaccattttcaatgtatttccttggtcttgatgttttatgtattttgtttcttgtataaaggatcggaggtagt 33314627  T
Q  494 at 495  Q
    ||    
T  33314628 at 33314629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 196 - 494
Target Start/End: Complemental strand, 41174851 - 41174553
Alignment:
Q  196 ctccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttc 295  Q
    ||||||||||||||||||| ||||||||||||| ||||       ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  41174851 ctccctccggtcctttttaatagaaacaaaagtgagaatttttttggtcctttttataagaagattgaccaagtttcaagtatattttaagctaaatttc 41174752  T
Q  296 atttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaa 395  Q
    ||||||||||||||| ||||||||||||||  |||||||||| ||||||  || ||||||||| |||||||| | ||||||||||  |        ||||    
T  41174751 atttgtgcccttatttattatgagagagaaagttaaaagtaaataagttagtgaaataaagaggaattaattgaggggtattcatgaattttttttaaaa 41174652  T
Q  396 tgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    | ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  41174651 tatagaagtatattaaatgaagatgactattttcaatgtatttccttgatcttgatgttttatgtcttttgtttcttgcataaaggaccggaggaagta 41174553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 197 - 497
Target Start/End: Complemental strand, 3097741 - 3097438
Alignment:
Q  197 tccctccggtcctttttattagaaacaaaagtaagaannnnnnng-gtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttc 295  Q
    |||||||||||||||||||||||||||||||| |||          |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  3097741 tccctccggtcctttttattagaaacaaaagtgagattttttttttgtcctttttataagaagattgaccaagtttcaagtatgtttgaagctaaatttc 3097642  T
Q  296 atttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcataga---annnnnnna 392  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| ||||||  |||||||||||| | |||||||| |||||| ||| ||                
T  3097641 atttgtgcccttatttattatgagagtgaaaattaaaagtaaataagttagtggaataaagaggatttaatttaggggtatacatggatttttttttttt 3097542  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3097541 aaatgtagaagtgtattaaatgaagattactattttcaatgtatttccttgatcttgatgttttatgtc-tatgtttcttgtataaaggaccggagggag 3097443  T
Q  493 tattt 497  Q
    |||||    
T  3097442 tattt 3097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 24868467 - 24868768
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||  ||||||||||||||||||||||| ||||        ||| |||||||||| |  ||||| |||||||||||||||||||||| |||||    
T  24868467 tactccctcccatcctttttattagaaacaaaagtgagaattttttttgtcttttttataagaaatattgaccaagtttcaagtatgtttgaagttaaat 24868566  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| || || |||            
T  24868567 ttcatttgtacccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtgttaatggaattttctt- 24868665  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    || | |||| ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  24868666 aattatagaggtgtattaaatgaagattactattttcaatgtattttcttagacttgatgttttatgtcttttgtttcttgtataaaggatcggatggag 24868765  T
Q  493 tat 495  Q
    |||    
T  24868766 tat 24868768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 194 - 384
Target Start/End: Complemental strand, 21263090 - 21262900
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21263090 tactccctccggtcctttttattagaaacaaaagtgataatttttttggtcctttttataagaagattgatcaagtttcaagtatgtttgaagctaaatt 21262991  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaa 384  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  21262990 tcatttgcgcccatattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtatttatagaa 21262900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 393 - 495
Target Start/End: Complemental strand, 21262596 - 21262494
Alignment:
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||    
T  21262596 aaatgtagaagcgtattaaatgaagatgactattttcaatgtattttcttggtgttgatgttttatgtcttttgtttcttttataaaggaccggaggtag 21262497  T
Q  493 tat 495  Q
    |||    
T  21262496 tat 21262494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 259 - 380
Target Start/End: Original strand, 4237918 - 4238039
Alignment:
Q  259 attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagag 358  Q
    |||||| || ||||| | |||||||||| ||||||||||||||||| ||||| ||||||||| |||||| |||||  |||||| ||  |||||| |||||    
T  4237918 attgataaattttcatggatgtttgaagttaaatttcatttgtgccgttatttattatgagatagaataataaaatgaagtaaattggtggaatcaagag 4238017  T
Q  359 taattaatttaagggtattcat 380  Q
    ||||||||||| ||||||||||    
T  4238018 taattaatttaggggtattcat 4238039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 700 - 768
Target Start/End: Original strand, 38494357 - 38494425
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38494357 attaagggtccgtttgttatggattagaataaaagtgattttgacattaaaaaatttaaagattatttt 38494425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 20515507 - 20515450
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  20515507 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatttt 20515450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 699 - 763
Target Start/End: Original strand, 35781245 - 35781309
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  35781245 aattaagggtccgtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 35781309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 2211451 - 2211397
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  2211451 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 2211397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 35781825 - 35781771
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  35781825 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 35781771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 700 - 765
Target Start/End: Original strand, 28793866 - 28793931
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  28793866 attatgggtccgtttgttacggattaacataaaagtgattttgacatcaaataatttagagattat 28793931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 35041976 - 35041919
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  35041976 gtttgttacggattaaaataaaagtgattttgacataaaataatttttagattatttt 35041919  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 36197553 - 36197610
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  36197553 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattatttt 36197610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 712 - 768
Target Start/End: Original strand, 34383255 - 34383311
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  34383255 tttgttacagattaaaataaaagtgattttgacataaaataatttagagattatttt 34383311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 1349529 - 1349583
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  1349529 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattat 1349583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 699 - 765
Target Start/End: Original strand, 38184154 - 38184220
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| | |||||||||| | ||||||||||||||||||||||| |||||||||| |||||||    
T  38184154 aattaagggcccgtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattat 38184220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 699 - 765
Target Start/End: Complemental strand, 38214203 - 38214137
Alignment:
Q  699 aattaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| | |||||||||| | ||||||||||||||||||||||| |||||||||| |||||||    
T  38214203 aattaagggcccgtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattat 38214137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 40591185 - 40591239
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  40591185 gtttgttacggattaaaataaaagtgattttgacataaattaatttagagattat 40591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 704 - 768
Target Start/End: Complemental strand, 30054693 - 30054629
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||| ||||||||||||||||||||||||||||||| | || |||||||||| |||| |||||    
T  30054693 agggtccgtttgttacggattaaaataaaagtgattttaaaataaaataatttagagataatttt 30054629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 713 - 765
Target Start/End: Original strand, 35040861 - 35040913
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  35040861 ttgttacagattaaaataaaagtgattttgacataaaataatttagagattat 35040913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 702 - 765
Target Start/End: Complemental strand, 35041747 - 35041684
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| | |||||||||||||||||||||||||||||||||| | | |||||||| |||||||    
T  35041747 taagggcccgtttgttacggattaaaataaaagtgattttgacgtaagataatttagagattat 35041684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 761
Target Start/End: Original strand, 5249225 - 5249275
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaaga 761  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  5249225 gtttgttacggattaaaataaaattgatttttacataaaataatttaaaga 5249275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 18585569 - 18585621
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||| |||||    
T  18585569 gtttgttatggattaaaataaaagtgattttggcataaaataatttatagatt 18585621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 717 - 764
Target Start/End: Complemental strand, 27124312 - 27124265
Alignment:
Q  717 tacggattaaaataaaagtgattttgacattaaataatttaaagatta 764  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  27124312 tacggattaaaataaaagtgattttaacatttaataatttagagatta 27124265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 706 - 757
Target Start/End: Complemental strand, 35040616 - 35040565
Alignment:
Q  706 ggtcagtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||| |||||||||||||||||||||| |||||| |||||| ||||||||||    
T  35040616 ggtccgtttgttacggattaaaataaatgtgattgtgacataaaataattta 35040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 712 - 766
Target Start/End: Complemental strand, 10371612 - 10371558
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatt 766  Q
    ||||||||| |||||||||||| | ||||||| ||| ||||||||||||||||||    
T  10371612 tttgttacgaattaaaataaaaataattttgatatttaataatttaaagattatt 10371558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 369
Target Start/End: Complemental strand, 2935034 - 2934905
Alignment:
Q  242 gtcctttttataagta-gattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatatt-aaaagtaagt 339  Q
    |||||||||||||| | |||| | ||| ||| |||| | ||||||| |||||||||||| | |||||||| ||||||||||||  |||| |||||||| |    
T  2935034 gtcctttttataagaaagatttaccaatttttaagtgtatttgaagttaaatttcatttatacccttatttattatgagagaggttattaaaaagtaaat 2934935  T
Q  340 aagtttatggaataaagagtaattaattta 369  Q
    || ||   ||||| || |||||||||||||    
T  2934934 aaattgccggaatcaaaagtaattaattta 2934905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 764
Target Start/End: Complemental strand, 35041373 - 35041320
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatta 764  Q
    ||||||||||||||||||||||||| ||||||  || |||||||||| ||||||    
T  35041373 gtttgttacggattaaaataaaagtaattttgcaataaaataatttagagatta 35041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 4238151 - 4238237
Alignment:
Q  347 tggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgta 435  Q
    |||||| |||||||||||||||| |||||||||  |||        |||||||||  |||||||||||||||| |||||||||||||||    
T  4238151 tggaatcaagagtaattaatttaggggtattcagggaaaaaatt--aaatgtagagatgtattaaatgaagataactattttcaatgta 4238237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 757
Target Start/End: Complemental strand, 4728068 - 4728029
Alignment:
Q  718 acggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  4728068 acggattaaaataaaagtgattttgatataaaataattta 4728029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 713 - 768
Target Start/End: Complemental strand, 6429707 - 6429652
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||  |||||||||||| ||||||| |||| |||||||||| ||||||||||    
T  6429707 ttgttacaaattaaaataaaaatgattttcacataaaataatttagagattatttt 6429652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 768
Target Start/End: Complemental strand, 19170475 - 19170428
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||| || |||||| || ||||||||||    
T  19170475 gattaaaataaaagtgattttgactttgaataatatatagattatttt 19170428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 25458332 - 25458386
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| | |||||||||||| | |||||||||| |||||||||| |||||||    
T  25458332 gtttgttatgaattaaaataaaaataattttgacataaaataatttagagattat 25458386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 35041519 - 35041465
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||  |||||||||||| |||||||| ||| |||||||||| |||||||    
T  35041519 gtttgttacaaattaaaataaaaatgattttgccataaaataatttagagattat 35041465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 765
Target Start/End: Original strand, 19134645 - 19134686
Alignment:
Q  724 taaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||| |||| |||||||||| |||||||    
T  19134645 taaaataaaagtgattttcacataaaataatttagagattat 19134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 2e-95; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 16130707 - 16130404
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  16130707 tactccctccggtcctttttattagaaacaaaagtgaaaaaaaatttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 16130608  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcataga-annnnnnn 391  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||             
T  16130607 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaaaagtaattaatttaagggtattcatggattttttttt 16130508  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     ||||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  16130507 taaatgtagaggtgtattaaatgaagataactattttcaatgtatttccttgatcttgatgttttatctcttttgtttcttgtataaaggaccggaggga 16130408  T
Q  492 gtat 495  Q
    ||||    
T  16130407 gtat 16130404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 194 - 496
Target Start/End: Complemental strand, 5800629 - 5800329
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||||| | |||||||||||||||||||||||  |||       ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  5800629 tactccctcagttcctttttattagaaacaaaagtgggaatttttttggtcctttttataagaagattgaccaagtttcaagtatgtttgaagataaatt 5800530  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| ||||||  |||||||||||| |||||||||| |||||||||| |||             
T  5800529 tcatttgtgtccttatttattatgagagagaaaattaaaagtaaataagttagtggaataaagagaaattaatttaggggtattcat-gaattttttt-t 5800432  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5800431 aatatagaagtgtattaaatgaagatgactattttcaatgtatttccttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 5800332  T
Q  494 att 496  Q
    |||    
T  5800331 att 5800329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 189 - 495
Target Start/End: Original strand, 1553712 - 1554023
Alignment:
Q  189 tttattactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagc 287  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||       ||||||||||||||| || ||||||||| |||||||||||||||||||    
T  1553712 tttaatactccctccggtcctttttattagaaacaaaa-tgagaatttttgtggtcctttttataagaagtattgatcaaatttcaagtatgtttgaagc 1553810  T
Q  288 taaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannn 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||       
T  1553811 taaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagttgatggaataaagagtaattaatttaagggtatttatagaattt 1553910  T
Q  388 nnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttc------ttggtcttgatgttttatgtcttttgtttcttgtataaagg 481  Q
         ||||||||||||||||||||||||| ||||||||||||||||||||||      ||||| ||| |||||||||| |||  ||| |||||||||||    
T  1553911 tttt-aaatgtagaagtgtattaaatgaagttgactattttcaatgtattttcttggtgttggtgttggtgttttatgtttttgtttttttgtataaagg 1554009  T
Q  482 accggagggagtat 495  Q
    || |||||||||||    
T  1554010 actggagggagtat 1554023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 208 - 484
Target Start/End: Complemental strand, 35050483 - 35050208
Alignment:
Q  208 ctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgccctt 307  Q
    ||||||||||||||||||||| ||||       ||| ||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  35050483 ctttttattagaaacaaaagtgagaatttttttggttctttttataaaaagatcgatcaagtttcaagtatgtctgaagctaaatttcatttgtgtcctt 35050384  T
Q  308 attgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgta 407  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||           |||||||||||||||    
T  35050383 attgattatgagagagaatattaaaagtaagtaagttgatgaaataaagagtaattaatttaagggtatacata-ttttttttttaaatgtagaagtgta 35050285  T
Q  408 ttaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggacc 484  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  35050284 ttaaatgaagatgactattttcaatgtattttcttgatgttgatgttttatgtcttttgtttcttgtataaaggacc 35050208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 16130157 - 16129850
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  16130157 tactccctccggtcctttttattagaaacaaaagtgaaaaaaaatttggtcctttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 16130058  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcataga-----annn 387  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||| ||             
T  16130057 ttcatttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaaaagtaattaatttaggggtattcatggattttttttt 16129958  T
Q  388 nnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccgga 487  Q
         ||||||| | ||||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  16129957 tttttaaatgtaaaggtgtattaaatgaagataactattttcaatgtatttccttgattttgatgttttatgtcttttgtttcttgtataaaggaccgga 16129858  T
Q  488 gggagtat 495  Q
    ||||||||    
T  16129857 gggagtat 16129850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 194 - 494
Target Start/End: Original strand, 30222693 - 30222992
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| |||||||||||||||||||||||||||| | ||||       | || |||||||||| |||||||||||||||||| ||||||||| |||||| |    
T  30222693 tactacctccggtcctttttattagaaacaaaaatgagaatttttttgatcatttttataagaagattgatcaagtttcaaatatgtttgatgctaaaat 30222792  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||  |        |    
T  30222793 tcatttgtgttcttattgattatgaaagagaatattaaaagtaagtaagttgatggattaaagagtaattaatttaaggatattcata-tacttttttta 30222891  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||| ||||||||||||    
T  30222892 aatgtagaagtatattaaatgaagatgactattttcaatgtattttcttggtgttgatattttatgtcttttgttttttatataaagaaccggagggagt 30222991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 194 - 495
Target Start/End: Original strand, 27654606 - 27654905
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||||||||||| |||||| ||||||| |||||    
T  27654606 tactccctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaaatattgatcaagttttaagtatctttgaagttaaat 27654705  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| || || |||            
T  27654706 ttcatttgtgcccttatttattat--gagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggttttaatggaattttctt- 27654802  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  27654803 aaatatagaggtgtattaaatgaagattactattttcaatgtatttccttggtcttgatgttttatgtcttttgtttcttatataaaggatcggagggag 27654902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 194 - 496
Target Start/End: Complemental strand, 40988261 - 40987959
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagt-aagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaa 291  Q
    ||||||||||||||||||||||||||||||||||| ||          ||||||||||||||| |  ||||| ||||||| ||||||||||||| |||||    
T  40988261 tactccctccggtcctttttattagaaacaaaagtgaattttttttttggtcctttttataagaaatattgaccaagttttaagtatgtttgaaactaaa 40988162  T
Q  292 tttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnn 391  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||           
T  40988161 tttcatttgtgcccttatttattatgagaga--atattaaaagtaagtaagttggcggaataaagagtaattaatttaggggtattcattgaattttttt 40988064  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  40988063 taaatgtagaggtgtattaaatgaagataactattttcaatgtatttccttggtcctgatgttttatgtcttttgtttcttgtataaaggaccggaggaa 40987964  T
Q  492 gtatt 496  Q
    |||||    
T  40987963 gtatt 40987959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 194 - 495
Target Start/End: Complemental strand, 45192765 - 45192466
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    |||| |||||||||||||||||||||||||||||| ||||       | ||||||||||||| |||||||| ||||||| | ||| ||| | |||||| |    
T  45192765 tactacctccggtcctttttattagaaacaaaagtgagaatttttttgatcctttttataagaagattgattaagtttctaatattttttatgctaaaat 45192666  T
Q  294 tcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnnaa 393  Q
    |||||||||  |||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||        |    
T  45192665 tcatttgtgttcttattaattatgagacagaatattaaaaataagtaagttgatggaataaagagtaattaatttaagggtattcatggaattttttt-a 45192567  T
Q  394 aatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagt 493  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||||||| |||    
T  45192566 aatgtagaagtatattaaatgaagatgactattttcaatgtattttcttgatgttgatg-tttatgtcttttgtttcttgtataaagaaccggaggaagt 45192468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 193 - 427
Target Start/End: Complemental strand, 27333132 - 27332899
Alignment:
Q  193 ttactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaat 292  Q
    ||||| |||||||||||||||||||||||||||||| ||||       ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  27333132 ttacttcctccggtcctttttattagaaacaaaagtgagaatttttttggtcctttttataagaagattgatcaagttttaagtatgtttgaagctaaat 27333033  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||            
T  27333032 ttcatttgtacccttattgattatgagagaaaatattaaaagtaagtaagttaatggaataaagagtaattaatttaagggtatttatagaattttttt- 27332934  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattt 427  Q
    |||| ||||||||||||||||||||||||||||||    
T  27332933 aaatatagaagtgtattaaatgaagatgactattt 27332899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 276 - 496
Target Start/End: Original strand, 27846418 - 27846638
Alignment:
Q  276 tatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggta 375  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||  ||||||| | |||||||||||||||| ||    
T  27846418 tatgtttgaagttaaatttcatttgtacccttatttattatgagagataatattaaaagtaagtaagttggtggaatagatagtaattaatttaaggata 27846517  T
Q  376 ttcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgta 475  Q
    ||||| |||        ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  27846518 ttcatggaattgtttttaaatgtagaagtgtattaaatgaagataactattttcaaagtatttccttggtcctgatgttttatgtcttttgtttcttgta 27846617  T
Q  476 taaaggaccggagggagtatt 496  Q
    ||| ||||| |||||||||||    
T  27846618 taagggaccagagggagtatt 27846638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 194 - 503
Target Start/End: Original strand, 34546650 - 34546958
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||||| | ||||||||||||||||| |||||| ||||        ||| |||||||||  |  ||||||||||||| |||||||||||||||||| |    
T  34546650 tactcccttccgtcctttttattagaaataaaagtgagaattttttttgtcttttttataaaaaatattgatcaagttttaagtatgtttgaagctaa-t 34546748  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    ||||||| |||||||||| ||||||||| |  ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||            
T  34546749 ttcatttctgcccttatttattatgagaaa--atattaaaagtaagtaagttggtggaataaagagtaattaatttaggggtattcat-gaatttttttt 34546845  T
Q  393 --aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggg 490  Q
      ||||||| | ||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34546846 ttaaatgtaaaggtgcattaaatgaagataactattttcaatgtatttccttggtcctgatgttttatgtcttttgtttcttgtataaaggaccggaggg 34546945  T
Q  491 agtattttttgtt 503  Q
    |||| ||||||||    
T  34546946 agtaatttttgtt 34546958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 260 - 496
Target Start/End: Complemental strand, 4813878 - 4813644
Alignment:
Q  260 ttgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagt 359  Q
    |||| ||| ||| |||| || ||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||  |||||| || |||    
T  4813878 ttgaccaatttttaagtgtgcttgaaactaaatttcatttgtgcccttatttattatgagaaggaatattaaaagtaagtaagttggtggaatgaaaagt 4813779  T
Q  360 aattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatg 459  Q
    ||||||||||| ||||||||| |||        ||||| ||| ||||||||||||||||| |||||||| ||||||||| |||||||||  || ||||||    
T  4813778 aattaatttaaaggtattcatggaaaactatttaaatggagaggtgtattaaatgaagataactatttttaatgtatttccttggtctt--tgatttatg 4813681  T
Q  460 tcttttgtttcttgtataaaggaccggagggagtatt 496  Q
    | ||||||||||| |||||||||||||||||||||||    
T  4813680 tattttgtttcttatataaaggaccggagggagtatt 4813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 308 - 488
Target Start/End: Original strand, 35428415 - 35428598
Alignment:
Q  308 attgattatgagagagaatattaaaagtaagtaagtttat----ggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaag 403  Q
    |||||||||||||||||| |||||||||||||||||| ||    |||||||||||||||||||||||||||||||||| ||       ||||| ||||||    
T  35428415 attgattatgagagagaaaattaaaagtaagtaagttgattgatggaataaagagtaattaatttaagggtattcata-aaaatttttaaaatatagaag 35428513  T
Q  404 tgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggag 488  Q
     || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||    
T  35428514 cgtgttaaatgaagatgactattttcaatgtattttcttgatgttgatgttttatgtcttttgtttcttttataaatgaccggag 35428598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 245 - 459
Target Start/End: Original strand, 36834287 - 36834495
Alignment:
Q  245 ctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtt 344  Q
    ||||||||||| | |||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||   |||||||||||||||||||||||||    
T  36834287 ctttttataagaaaattgattaaatttcaagtatgtttgaagctaaatttcatttgtacccttatttattat--aagagaatattaaaagtaagtaagtt 36834384  T
Q  345 tatggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttgg 444  Q
      |||||||||||||||||||||||  |||||||||  ||        ||||||||||||||||||||| |||||||||||||| |||||||||  ||||    
T  36834385 ggtggaataaagagtaattaattta--ggtattcatgaaatttttt--aaatgtagaagtgtattaaataaagatgactatttttaatgtatttctttgg 36834480  T
Q  445 tcttgatgttttatg 459  Q
    ||||||| |||||||    
T  36834481 tcttgatattttatg 36834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 9411731 - 9411909
Alignment:
Q  197 tccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaatttc 295  Q
    |||||||||||| ||||||||||||||||||| | ||       ||||||||||||||| |  ||||| |||||||||||||| ||||||| ||||||||    
T  9411731 tccctccggtccattttattagaaacaaaagtgaaaatttttttggtcctttttataagaaatattgaccaagtttcaagtatatttgaagttaaatttc 9411830  T
Q  296 atttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggt 374  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  9411831 acttgtgcccttatttattatgagagagaatattaaaagtaagtaagttggtggaataaagagtaattaatttaggggt 9411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 259 - 469
Target Start/End: Complemental strand, 23933446 - 23933236
Alignment:
Q  259 attgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatatt-aaaagtaagtaagtttatggaataaaga 357  Q
    ||||| ||| |||||| | ||||||||| ||||||||||||||||||||||| |||||  ||||||||||| |||| |||| |||||  | |||| ||||    
T  23933446 attgaccaattttcaaatgtgtttgaagttaaatttcatttgtgcccttatttattatatgagagaatattaaaaaataagaaagttggtagaatcaaga 23933347  T
Q  358 gtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgtttta 457  Q
    |||||||||||| |||||||||| |||        ||||||||| || ||||||| ||| || | ||||||||||||||||| |||||||||||| ||||    
T  23933346 gtaattaatttaggggtattcat-gaaaaaaaattaaatgtagaggtatattaaaagaaaataattattttcaatgtatttttttggtcttgatgattta 23933248  T
Q  458 tgtcttttgttt 469  Q
    ||||||||||||    
T  23933247 tgtcttttgttt 23933236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 193 - 497
Target Start/End: Complemental strand, 13879236 - 13878943
Alignment:
Q  193 ttactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||||||||| ||||||||||||||||||||||| | |        ||||||||||| ||| ||||||||||||||| |||           ||||||    
T  13879236 ttactccctccgatcctttttattagaaacaaaagtgaaattttttttggtcctttttacaagaagattgatcaagtttaaag-----------ctaaat 13879148  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaa---nnnnn 389  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||| ||||||  ||||| |||||||||||||||||| ||||||||| |||            
T  13879147 ttcatttgtgcccttatttattatgagatagaatattaatagtaaataagttggtggaagaaagagtaattaatttaa-ggtattcat-gaatttttttt 13879050  T
Q  390 nnaaaatgtaga---agtgtattaaatgaagatgactattttcaatgtattttcttggtctt-gatgttttatgtcttttgtttcttgtataaaggaccg 485  Q
       |||||||||   |||||||||||||||||||||||||    |||||||| |||||| || |||||||||||| |||||||||||||||||| |||      
T  13879049 tttaaatgtagaagtagtgtattaaatgaagatgactatt----atgtatttccttggttttcgatgttttatgt-ttttgtttcttgtataaaagactc 13878955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 347 - 494
Target Start/End: Original strand, 35121301 - 35121446
Alignment:
Q  347 tggaataaagagtaattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtc 446  Q
    |||||||||||| |||||||||||||||||||||  |         |||||| |||||||||||||||||||||||||||| ||||||||||| || |||    
T  35121301 tggaataaagaggaattaatttaagggtattcatgaatttttttttaaatgt-gaagtgtattaaatgaagatgactatttccaatgtatttt-ttagtc 35121398  T
Q  447 ttgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  35121399 ttgatgttttatgtcttttgttttttgtataaaggatcggagggagta 35121446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 194 - 316
Target Start/End: Original strand, 35121171 - 35121293
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtagattgatcaagtttcaagtatgtttgaagctaaatt 293  Q
    ||||||| ||| || ||||||||||||||||| ||  |||       ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  35121171 tactccccccgatcatttttattagaaacaaatgtgcgaatttttttggtcctttttataagaagattgaccaagtttcaagtatgtttgaagcaaaatt 35121270  T
Q  294 tcatttgtgcccttattgattat 316  Q
    ||||||||||||||||| |||||    
T  35121271 tcatttgtgcccttatttattat 35121293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 9412283 - 9412356
Alignment:
Q  421 actattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggagta 494  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | | |||||||||||    
T  9412283 actattttcaatgtatttccttggtcttgatgttttatgtcttttatttcttgtataaggaatcggagggagta 9412356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 704 - 765
Target Start/End: Complemental strand, 33813486 - 33813425
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  33813486 agggtccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 33813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 704 - 765
Target Start/End: Complemental strand, 33872956 - 33872895
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  33872956 agggtccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 33872895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 287 - 489
Target Start/End: Original strand, 11907972 - 11908172
Alignment:
Q  287 ctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaann 386  Q
    |||||||||||||||| | ||||| ||||||||||||  |||||||| ||| ||||||  |||||| ||||||||||||| ||| ||||||||| |||      
T  11907972 ctaaatttcatttgtgtctttatttattatgagagag--tattaaaaataaataagttggtggaatcaagagtaattaatgtaaaggtattcatggaaga 11908069  T
Q  387 nnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatg-tcttttgtttcttgtataaaggaccg 485  Q
          ||||||| |   |||||||||||| ||    |||||||||||||||||||| |||| ||| |||||| | |||||||||||||| | |||| ||    
T  11908070 aattt-aaatgtacagaagtattaaatgaaaatagtcattttcaatgtattttcttgatcttaatgatttatgtttttttgtttcttgtaaagaggatcg 11908168  T
Q  486 gagg 489  Q
    ||||    
T  11908169 gagg 11908172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 6614478 - 6614424
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  6614478 gtttgttacagattaaaataaaagtgattttgacataaaataatttaaagattat 6614424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 47793195 - 47793249
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  47793195 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 47793249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 700 - 765
Target Start/End: Original strand, 6844325 - 6844390
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  6844325 attaagggcccgtttgttacagattaaaataaaagtgattttgacataaaataatttagagattat 6844390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 704 - 765
Target Start/End: Original strand, 33240946 - 33241007
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||    
T  33240946 agggtccgtttgttatggattaaaataaaagtgattttgacataaaataatttagagattat 33241007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 702 - 763
Target Start/End: Complemental strand, 42834826 - 42834765
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  42834826 taagggaccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 42834765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 700 - 765
Target Start/End: Original strand, 47795798 - 47795863
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| | ||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  47795798 attaagggcccgtttgttacggattaaaataaaagtgattttgatataaaataatttatagattat 47795863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 717 - 768
Target Start/End: Original strand, 42429472 - 42429523
Alignment:
Q  717 tacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  42429472 tacggattaaaataaaagtgattttgacataaaataatttagagattatttt 42429523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 33674853 - 33674907
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  33674853 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattat 33674907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 714 - 768
Target Start/End: Complemental strand, 43115173 - 43115119
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  43115173 tgttatggattaaaataaaagtaattttgacataaaataatttaaagattatttt 43115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 47794812 - 47794758
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  47794812 gtttgttacggattaaaataaaagtgattttgacataaaataaattagagattat 47794758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 704 - 765
Target Start/End: Complemental strand, 43326182 - 43326121
Alignment:
Q  704 agggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||| |||||| |||||||||||||||||||||||| |||| |||||||||| |||||||    
T  43326182 agggtccgtttgtcacggattaaaataaaagtgattttcacataaaataatttagagattat 43326121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 705 - 765
Target Start/End: Original strand, 11981580 - 11981640
Alignment:
Q  705 gggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||| ||||||| | |||||||||||||||||||||||||| |||||||||| |||||||    
T  11981580 gggtccgtttgttgcagattaaaataaaagtgattttgacataaaataatttagagattat 11981640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 711 - 763
Target Start/End: Original strand, 43114633 - 43114685
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  43114633 gtttgatacggattaaaataaaagtgattttgacataaaataatttagagatt 43114685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 764
Target Start/End: Original strand, 47795749 - 47795801
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaagatta 764  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  47795749 tttgttacggattaaaataaaagtgattttaacataaaataatttagagatta 47795801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 700 - 763
Target Start/End: Original strand, 39842656 - 39842718
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||| |||||    
T  39842656 attaagggtccgtttgttacg-attaaaataaaaatgattttgacataaaataatttagagatt 39842718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 757
Target Start/End: Original strand, 6941241 - 6941287
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||    
T  6941241 gtttgttacggattaaaataaaagtgattttgacgtaaaataattta 6941287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 10338376 - 10338322
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||| |||||||    
T  10338376 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagattat 10338322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 24686063 - 24686117
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||    
T  24686063 gtttgttacggattaaaataaaagtaattttgacatacaataatttagagattat 24686117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 47795712 - 47795658
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||    
T  47795712 gtttgttacggattaaaataaaaatgattttcacataaaataatttagagattat 47795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 713 - 757
Target Start/End: Original strand, 10065983 - 10066027
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  10065983 ttgttacagattaaaataaaagtgattttgacataaaataattta 10066027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 49480444 - 49480392
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||| |||||    
T  49480444 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagatt 49480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 713 - 768
Target Start/End: Original strand, 8298421 - 8298476
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| ||||||||| ||||||||||||| || ||||||||| ||||||||||    
T  8298421 ttgttacgaattaaaatataagtgattttgaccttcaataatttagagattatttt 8298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 757
Target Start/End: Complemental strand, 11335868 - 11335822
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||    
T  11335868 gtttgttacgtattaaaataaaagtgattttgatataaaataattta 11335822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 757
Target Start/End: Complemental strand, 11493887 - 11493841
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataattta 757  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||    
T  11493887 gtttgttacgtattaaaataaaagtgattttgatataaaataattta 11493841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 700 - 742
Target Start/End: Original strand, 12016764 - 12016806
Alignment:
Q  700 attaagggtcagtttgttacggattaaaataaaagtgattttg 742  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  12016764 attaagggcccgtttgttacggattaaaataaaagtgattttg 12016806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 45807860 - 45807914
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| |||||||||||||||| ||||||| || |||||||||| |||||||    
T  45807860 gtttgttatggattaaaataaaagtaattttgatataaaataatttagagattat 45807914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 49243654 - 49243708
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| ||||||||||||||||||||||||  | |||||||||| |||||||    
T  49243654 gtttgttatggattaaaataaaagtgattttgatgtaaaataatttagagattat 49243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 6319238 - 6319181
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||| |||||||||||||| | |||||||||  |||||||||| ||||||||||    
T  6319238 gtttgttatggattaaaataaaaataattttgacacgaaataatttagagattatttt 6319181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 47796695 - 47796643
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||| |||||||||||||| ||||| |||| |||||||||| |||||    
T  47796695 gtttgttacgaattaaaataaaagttatttttacataaaataatttagagatt 47796643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 759
Target Start/End: Complemental strand, 20472731 - 20472684
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaa 759  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  20472731 tttgtcacggagcaaaataaaagtgattttgacattgaataatttaaa 20472684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 759
Target Start/End: Original strand, 20558817 - 20558864
Alignment:
Q  712 tttgttacggattaaaataaaagtgattttgacattaaataatttaaa 759  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  20558817 tttgtcacggagcaaaataaaagtgattttgacattgaataatttaaa 20558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 707 - 754
Target Start/End: Original strand, 23658945 - 23658992
Alignment:
Q  707 gtcagtttgttacggattaaaataaaagtgattttgacattaaataat 754  Q
    ||||||||||| | |||| |||||||||||||||| ||||||||||||    
T  23658945 gtcagtttgttgcagatttaaataaaagtgatttttacattaaataat 23658992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 763
Target Start/End: Original strand, 26271825 - 26271872
Alignment:
Q  716 ttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||||||||||||||||  |||||||||| |||||||||| |||||    
T  26271825 ttacggattaaaataaaagcaattttgacataaaataatttagagatt 26271872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 52404394 - 52404339
Alignment:
Q  711 gtttgttacggatt-aaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||||| ||| ||||||||| |||||||||||| |||||||||| |||||||    
T  52404394 gtttgttacgtatttaaaataaaaatgattttgacataaaataatttagagattat 52404339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 713 - 763
Target Start/End: Complemental strand, 45296973 - 45296923
Alignment:
Q  713 ttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||| |||||||||||||||||||| || || |||||||||| |||||    
T  45296973 ttgttacagattaaaataaaagtgatttcgatataaaataatttagagatt 45296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 702 - 768
Target Start/End: Complemental strand, 46675922 - 46675856
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    |||||||  ||| |||| |||||||||| |||||||||||||| | ||||||| || ||||||||||    
T  46675922 taagggtatgttcgttaaggattaaaattaaagtgattttgacgtaaaataatatatagattatttt 46675856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 765
Target Start/End: Original strand, 6318792 - 6318833
Alignment:
Q  724 taaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    ||||||| ||||||||||||||| |||||||||| |||||||    
T  6318792 taaaatagaagtgattttgacataaaataatttagagattat 6318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 763
Target Start/End: Complemental strand, 7562060 - 7562023
Alignment:
Q  726 aaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  7562060 aaataaaagtgattttgacataaaataatttagagatt 7562023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 721 - 762
Target Start/End: Original strand, 35187751 - 35187792
Alignment:
Q  721 gattaaaataaaagtgattttgacattaaataatttaaagat 762  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  35187751 gattaaaatataagtgattttaacattaaataatttagagat 35187792  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 714 - 771
Target Start/End: Complemental strand, 45059296 - 45059239
Alignment:
Q  714 tgttacggattaaaataaaagtgattttgacattaaataatttaaagattattttgta 771  Q
    ||||| || ||||| ||||| ||||||||||||| ||||||||| | |||||||||||    
T  45059296 tgttatggtttaaagtaaaattgattttgacattgaataatttagatattattttgta 45059239  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 47796769 - 47796712
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattatttt 768  Q
    ||||||||| ||||||||||||||||| |||||| || ||| ||||| | ||||||||    
T  47796769 gtttgttacagattaaaataaaagtgactttgaccttgaatgatttagatattatttt 47796712  T

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Target: scaffold0067 (Bit Score: 143; Significance: 1e-74; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 194 - 496
Target Start/End: Original strand, 6703 - 7007
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||| |||||||||||||||||||||||||||| | ||       |||| |||||||||| |  ||||| ||||||||||||||||||||||||||||    
T  6703 tactccatccggtcctttttattagaaacaaaagttaaaaaaaatttggtcatttttataagaaatattgaccaagtttcaagtatgtttgaagctaaat 6802  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatag-aannnnnnn 391  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||| ||           
T  6803 ttcatttgtgcgcttatttattatgagaaagaatattaaaagtaagtaagttggtagaataaagagtaattaatttaaggatattcatagaaaaaaaaat 6902  T
Q  392 aaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggaggga 491  Q
     |||||||||  |||||||||||||||| |||||||||||||||||| |||  |||| |||||||||||||||||||||||| |||||| | |||| |||    
T  6903 taaatgtagagatgtattaaatgaagataactattttcaatgtatttccttaatcttaatgttttatgtcttttgtttcttgaataaagaatcggatgga 7002  T
Q  492 gtatt 496  Q
    |||||    
T  7003 gtatt 7007  T

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Target: scaffold0008 (Bit Score: 142; Significance: 5e-74; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 194 - 496
Target Start/End: Complemental strand, 258509 - 258216
Alignment:
Q  194 tactccctccggtcctttttattagaaacaaaagtaagaannnnnnnggtcctttttataagtag-attgatcaagtttcaagtatgtttgaagctaaat 292  Q
    |||||| |||||||||||||||||||||||||||| ||||       ||||||||||||||| |  ||||| ||||||| |||||||||||||| |||||    
T  258509 tactccatccggtcctttttattagaaacaaaagtgagaattttttaggtcctttttataagaaatattgaccaagttttaagtatgtttgaagttaaat 258410  T
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtattcatagaannnnnnna 392  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||         |||||||||||||| |||| || || |||       |    
T  258409 ttcatttgtgcctttatttattatgagagagaatattaaaattaagtaagttta---------gagtaattaatttaggggtgttgatggaattttctta 258319  T
Q  393 aaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 492  Q
    || | |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  258318 aa-tatagaggtgtattaaatgaagattactattttcaatgtatttccttggtcttgatgttttatgtcttttgtttcttgtataaaggaccggagggag 258220  T

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Target: scaffold0057 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 260 - 495
Target Start/End: Original strand, 30477 - 30711
Alignment:
Q  260 ttgatcaagtttcaagtatgtttgaagctaaatttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagt 359  Q
    |||| ||| |||||||| ||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||   ||||| ||||||    
T  30477 ttgaccaattttcaagtttgtttgaaattaaatttcatttgtgcccttatttattatgagagacaatattaaaagtaagtaagttggcggaatcaagagt 30576  T
Q  360 aattaatttaagggtattcatagaannnnnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatg 459  Q
    |||||||||| ||||||| || |||        ||||| ||| ||||||||||| || || |||||||||||||||||| || |||||||||| ||||||    
T  30577 aattaatttaggggtatttatggaaaaaattt-aaatgcagaggtgtattaaattaaaataactattttcaatgtatttcctcggtcttgatgatttatg 30675  T
Q  460 tcttttgtttcttgtataaaggaccggagggagtat 495  Q
    |||||||||||||  | |||| || |||||||||||    
T  30676 tcttttgtttcttagaaaaagcacaggagggagtat 30711  T

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Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 293 - 472
Target Start/End: Complemental strand, 30919 - 30741
Alignment:
Q  293 ttcatttgtgcccttattgattatgagagagaatattaaaagtaagtaagtttatggaataaagagtaattaatttaagggtatt-----catagaannn 387  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||  ||    ||||| |||||||||||||||| |||||||     ||| |||       
T  30919 ttcatgtgcgcccttatttattatgagagagaatattaaaagtatgttggt----ggaatcaagagtaattaatttaggggtattgtattcatggaaaaa 30824  T
Q  388 nnnnaaaatgtagaagtgtattaaatgaagatgactattttcaatgtattttcttggtcttgatgttttatgtcttttgtttctt 472  Q
        ||| ||| || || |||||| |||| || |||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  30823 atttaaa-tgttgaggtatattaa-tgaaaataactattttcaatttatttccttggtcttgatgatttatgtcttttgtttctt 30741  T

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Target: scaffold0224 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 702 - 763
Target Start/End: Complemental strand, 21907 - 21846
Alignment:
Q  702 taagggtcagtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    |||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21907 taagggaccgtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 71586 - 71532
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagattat 765  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||    
T  71586 gtttgttatggattaaaataaaagtgattttgacataaaataatttagagattat 71532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000006; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 106275 - 106224
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatttaaagatt 763  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||| |||||    
T  106275 gtttgttacagattaaa-taaaagtgattttgacataaaataatttagagatt 106224  T

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Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 711 - 755
Target Start/End: Original strand, 205121 - 205165
Alignment:
Q  711 gtttgttacggattaaaataaaagtgattttgacattaaataatt 755  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||    
T  205121 gtttgttacggattaaaatgatagtgattttgacataaaataatt 205165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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