View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1642R-Insertion-6 (Length: 882)

Name: NF1642R-Insertion-6
Description: NF1642R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1642R-Insertion-6
NF1642R-Insertion-6
[»] chr7 (101 HSPs)
chr7 (8-512)||(35523072-35523569)
chr7 (541-813)||(6626169-6626436)
chr7 (536-817)||(8952553-8952826)
chr7 (541-808)||(38816381-38816639)
chr7 (541-808)||(21766511-21766774)
chr7 (541-817)||(47403990-47404260)
chr7 (541-817)||(23999924-24000195)
chr7 (9-170)||(35517805-35517970)
chr7 (541-817)||(41320480-41320749)
chr7 (541-763)||(44141412-44141629)
chr7 (541-808)||(35193467-35193729)
chr7 (536-817)||(19276781-19277060)
chr7 (541-817)||(10336123-10336391)
chr7 (544-763)||(26174621-26174836)
chr7 (541-730)||(18732641-18732827)
chr7 (541-806)||(17356750-17357015)
chr7 (541-732)||(39997647-39997835)
chr7 (556-802)||(47913137-47913381)
chr7 (605-817)||(39384851-39385058)
chr7 (541-730)||(36508256-36508442)
chr7 (541-665)||(39102987-39103112)
chr7 (542-665)||(24164017-24164141)
chr7 (541-659)||(21276556-21276674)
chr7 (541-802)||(21438246-21438501)
chr7 (542-668)||(24000205-24000331)
chr7 (541-665)||(31657421-31657545)
chr7 (541-665)||(48863287-48863411)
chr7 (533-665)||(6607631-6607763)
chr7 (541-646)||(6607824-6607931)
chr7 (541-665)||(10336404-10336528)
chr7 (541-665)||(24164270-24164394)
chr7 (541-665)||(31849440-31849558)
chr7 (541-665)||(31849683-31849807)
chr7 (541-665)||(36508067-36508191)
chr7 (541-665)||(39102802-39102926)
chr7 (536-665)||(6626453-6626582)
chr7 (556-665)||(47913407-47913516)
chr7 (536-652)||(1795658-1795774)
chr7 (541-665)||(19276642-19276766)
chr7 (541-665)||(21766797-21766920)
chr7 (536-665)||(31657674-31657803)
chr7 (541-665)||(38567501-38567626)
chr7 (541-665)||(38816240-38816364)
chr7 (562-665)||(39997897-39998000)
chr7 (541-646)||(2765244-2765349)
chr7 (700-801)||(6607786-6607884)
chr7 (541-665)||(26174877-26175002)
chr7 (556-659)||(2765079-2765182)
chr7 (715-817)||(18732781-18732880)
chr7 (556-665)||(8952435-8952542)
chr7 (536-665)||(21438527-21438656)
chr7 (715-807)||(38567641-38567731)
chr7 (715-802)||(21276460-21276545)
chr7 (734-817)||(24164177-24164258)
chr7 (561-665)||(35193341-35193445)
chr7 (605-665)||(44141696-44141756)
chr7 (556-665)||(47403866-47403977)
chr7 (715-817)||(36508203-36508302)
chr7 (606-665)||(41320406-41320465)
chr7 (536-591)||(48863505-48863560)
chr7 (446-504)||(29726801-29726859)
chr7 (710-802)||(1795594-1795684)
chr7 (556-665)||(38567752-38567863)
chr7 (536-659)||(1795438-1795561)
chr7 (606-665)||(21276374-21276433)
chr7 (607-646)||(21276499-21276538)
chr7 (446-505)||(23221393-23221452)
chr7 (607-646)||(31657569-31657608)
chr7 (607-646)||(38567648-38567687)
chr7 (715-817)||(39997787-39997886)
chr7 (446-509)||(44718810-44718873)
chr7 (736-817)||(2765191-2765270)
chr7 (541-591)||(18046047-18046097)
chr7 (612-646)||(24164171-24164205)
chr7 (446-504)||(25251511-25251569)
chr7 (450-504)||(27279405-27279459)
chr7 (535-646)||(39384709-39384819)
chr7 (612-665)||(17356676-17356729)
chr7 (446-503)||(23177943-23178000)
chr7 (446-491)||(26980951-26980996)
chr7 (535-591)||(5850834-5850890)
chr7 (715-763)||(31657562-31657609)
chr7 (734-801)||(31849590-31849656)
chr7 (469-505)||(42227806-42227842)
chr7 (444-491)||(15015240-15015287)
chr7 (460-499)||(24099242-24099281)
chr7 (446-505)||(38911300-38911359)
chr7 (556-591)||(41320385-41320420)
chr7 (606-640)||(5850814-5850848)
chr7 (606-652)||(6607849-6607895)
chr7 (612-646)||(18732931-18732965)
chr7 (616-646)||(31849588-31849618)
chr7 (456-502)||(41250051-41250097)
chr7 (446-504)||(43539106-43539164)
chr7 (734-763)||(2765141-2765170)
chr7 (451-492)||(19684226-19684267)
chr7 (446-503)||(21136832-21136888)
chr7 (446-503)||(34000263-34000320)
chr7 (446-503)||(39106666-39106723)
chr7 (476-505)||(40449329-40449358)
chr7 (469-502)||(45272336-45272369)
[»] chr4 (140 HSPs)
chr4 (533-817)||(49264013-49264291)
chr4 (541-817)||(1613944-1614213)
chr4 (541-802)||(47690445-47690701)
chr4 (541-817)||(31317261-31317529)
chr4 (541-817)||(18436793-18437061)
chr4 (541-817)||(321651-321920)
chr4 (541-817)||(16335196-16335468)
chr4 (541-801)||(5813930-5814185)
chr4 (541-817)||(41965144-41965413)
chr4 (541-808)||(43979277-43979539)
chr4 (541-763)||(42495933-42496151)
chr4 (541-817)||(40005555-40005822)
chr4 (541-763)||(15169165-15169383)
chr4 (541-763)||(13199196-13199414)
chr4 (541-763)||(53940412-53940630)
chr4 (541-735)||(45311454-45311645)
chr4 (541-663)||(32328322-32328444)
chr4 (534-763)||(35377657-35377882)
chr4 (541-665)||(8444660-8444784)
chr4 (541-665)||(46008550-46008674)
chr4 (541-668)||(23205947-23206073)
chr4 (541-763)||(42207991-42208209)
chr4 (541-665)||(51892918-51893042)
chr4 (536-665)||(28693180-28693308)
chr4 (541-763)||(51716124-51716344)
chr4 (541-665)||(42598913-42599036)
chr4 (541-665)||(1922497-1922621)
chr4 (536-659)||(32384196-32384319)
chr4 (606-817)||(11021375-11021581)
chr4 (551-807)||(29526397-29526645)
chr4 (541-665)||(45226293-45226416)
chr4 (541-802)||(919331-919586)
chr4 (536-665)||(30560584-30560716)
chr4 (541-763)||(52096569-52096786)
chr4 (541-665)||(44589282-44589405)
chr4 (541-652)||(40147566-40147676)
chr4 (536-646)||(43561998-43562108)
chr4 (535-665)||(51892660-51892790)
chr4 (710-808)||(15169090-15169186)
chr4 (541-668)||(16335059-16335186)
chr4 (541-665)||(23205702-23205825)
chr4 (541-665)||(13198976-13199100)
chr4 (710-817)||(13199113-13199217)
chr4 (710-817)||(40147488-40147592)
chr4 (541-665)||(40147354-40147477)
chr4 (541-668)||(42496212-42496339)
chr4 (541-665)||(46008910-46009032)
chr4 (561-663)||(41965427-41965529)
chr4 (541-659)||(45311199-45311317)
chr4 (536-665)||(47690290-47690419)
chr4 (536-665)||(321933-322061)
chr4 (612-668)||(11021590-11021646)
chr4 (541-665)||(29526252-29526376)
chr4 (541-665)||(35377945-35378069)
chr4 (541-665)||(39210542-39210666)
chr4 (541-665)||(49263877-49264001)
chr4 (607-789)||(46008698-46008874)
chr4 (446-505)||(52936642-52936701)
chr4 (535-665)||(1922748-1922878)
chr4 (541-654)||(888070-888183)
chr4 (607-664)||(45311441-45311498)
chr4 (605-665)||(15169009-15169069)
chr4 (605-665)||(44589093-44589153)
chr4 (541-665)||(45848559-45848682)
chr4 (605-665)||(52096826-52096886)
chr4 (715-817)||(32328204-32328304)
chr4 (715-817)||(45311325-45311424)
chr4 (607-665)||(40005484-40005542)
chr4 (541-645)||(45848387-45848492)
chr4 (536-665)||(919176-919304)
chr4 (605-665)||(8444914-8444974)
chr4 (556-668)||(32328079-32328191)
chr4 (715-802)||(51892816-51892901)
chr4 (606-661)||(31317546-31317601)
chr4 (536-591)||(32384093-32384148)
chr4 (534-628)||(15168909-15169003)
chr4 (446-504)||(47704583-47704641)
chr4 (442-504)||(48171878-48171940)
chr4 (616-665)||(18437073-18437122)
chr4 (612-665)||(28692998-28693051)
chr4 (734-806)||(45226189-45226260)
chr4 (606-659)||(53940665-53940718)
chr4 (715-802)||(1922638-1922723)
chr4 (715-813)||(23205841-23205936)
chr4 (533-589)||(44098770-44098826)
chr4 (734-817)||(45848465-45848546)
chr4 (710-817)||(51716323-51716427)
chr4 (607-646)||(1922645-1922684)
chr4 (734-808)||(8444820-8444893)
chr4 (533-628)||(8444980-8445075)
chr4 (607-646)||(13199166-13199205)
chr4 (607-646)||(15169135-15169174)
chr4 (607-646)||(32328258-32328297)
chr4 (541-596)||(43980130-43980185)
chr4 (607-646)||(45311378-45311417)
chr4 (606-665)||(51716439-51716498)
chr4 (607-646)||(51892855-51892894)
chr4 (605-663)||(43561874-43561932)
chr4 (612-646)||(44589219-44589253)
chr4 (612-662)||(45226117-45226167)
chr4 (450-504)||(50668345-50668399)
chr4 (451-512)||(684988-685049)
chr4 (612-665)||(1614224-1614277)
chr4 (533-634)||(5340130-5340231)
chr4 (607-652)||(13199191-13199236)
chr4 (607-652)||(15169160-15169205)
chr4 (607-644)||(40147543-40147580)
chr4 (734-802)||(43561959-43562026)
chr4 (613-646)||(45226232-45226265)
chr4 (541-590)||(49148170-49148219)
chr4 (446-491)||(50380851-50380896)
chr4 (446-507)||(51465338-51465399)
chr4 (446-499)||(53530010-53530063)
chr4 (448-505)||(56096207-56096264)
chr4 (541-589)||(10616465-10616513)
chr4 (448-500)||(34960163-34960215)
chr4 (456-512)||(46434754-46434810)
chr4 (445-504)||(8415497-8415556)
chr4 (607-646)||(8444809-8444848)
chr4 (536-579)||(10616572-10616615)
chr4 (460-507)||(27871377-27871424)
chr4 (536-591)||(31317587-31317642)
chr4 (445-492)||(34942425-34942472)
chr4 (734-789)||(44589194-44589247)
chr4 (541-588)||(45226018-45226065)
chr4 (541-591)||(12398703-12398753)
chr4 (450-504)||(35050544-35050598)
chr4 (450-488)||(37970192-37970230)
chr4 (447-505)||(39146644-39146702)
chr4 (446-504)||(39489607-39489665)
chr4 (446-496)||(40160799-40160849)
chr4 (541-591)||(53940704-53940754)
chr4 (446-491)||(6459939-6459984)
chr4 (456-505)||(22411775-22411824)
chr4 (446-491)||(32923245-32923290)
chr4 (450-487)||(40614404-40614441)
chr4 (448-505)||(41520957-41521014)
chr4 (468-509)||(42344615-42344656)
chr4 (535-596)||(51716479-51716540)
chr4 (460-505)||(54677240-54677285)
[»] chr6 (76 HSPs)
chr6 (535-817)||(9566183-9566460)
chr6 (536-817)||(33360590-33360865)
chr6 (534-802)||(6390067-6390330)
chr6 (534-817)||(16408734-16409014)
chr6 (541-808)||(33243318-33243581)
chr6 (541-808)||(32218845-32219110)
chr6 (541-802)||(5997346-5997603)
chr6 (536-817)||(10143350-10143628)
chr6 (541-802)||(12395817-12396074)
chr6 (541-802)||(21002771-21003027)
chr6 (541-817)||(583663-583936)
chr6 (541-763)||(33705804-33706023)
chr6 (536-762)||(22695778-22696001)
chr6 (536-730)||(605664-605857)
chr6 (535-665)||(5146815-5146944)
chr6 (561-802)||(2793188-2793422)
chr6 (541-665)||(21904868-21904992)
chr6 (541-665)||(6535410-6535536)
chr6 (535-665)||(17204148-17204278)
chr6 (541-652)||(14630816-14630928)
chr6 (607-763)||(21905096-21905249)
chr6 (536-646)||(33877787-33877897)
chr6 (541-665)||(605480-605604)
chr6 (541-665)||(9565999-9566123)
chr6 (541-665)||(21905345-21905469)
chr6 (710-817)||(22695694-22695798)
chr6 (541-665)||(33243172-33243296)
chr6 (541-665)||(33360450-33360574)
chr6 (710-817)||(14630902-14631005)
chr6 (543-665)||(32219131-32219254)
chr6 (541-665)||(17203868-17203992)
chr6 (536-665)||(6389910-6390039)
chr6 (535-665)||(10143208-10143337)
chr6 (541-665)||(2793037-2793161)
chr6 (561-665)||(16409027-16409131)
chr6 (710-817)||(21905228-21905332)
chr6 (541-665)||(22695558-22695682)
chr6 (541-646)||(3199500-3199602)
chr6 (541-665)||(6535665-6535790)
chr6 (536-665)||(33706087-33706216)
chr6 (541-665)||(5997196-5997320)
chr6 (541-665)||(16120404-16120528)
chr6 (605-665)||(33877965-33878025)
chr6 (715-813)||(605614-605710)
chr6 (606-665)||(14444888-14444947)
chr6 (561-665)||(583950-584054)
chr6 (541-665)||(12395666-12395790)
chr6 (715-817)||(6535553-6535652)
chr6 (541-665)||(14631017-14631140)
chr6 (534-596)||(3199303-3199365)
chr6 (616-665)||(21905023-21905072)
chr6 (607-652)||(21905209-21905254)
chr6 (607-652)||(22695772-22695817)
chr6 (710-817)||(3199416-3199520)
chr6 (606-665)||(3199346-3199405)
chr6 (607-646)||(6535560-6535599)
chr6 (607-646)||(14630914-14630953)
chr6 (446-505)||(23635715-23635774)
chr6 (467-505)||(2105927-2105965)
chr6 (612-646)||(21905245-21905279)
chr6 (561-630)||(1827079-1827148)
chr6 (616-665)||(2182195-2182244)
chr6 (469-505)||(4826314-4826350)
chr6 (456-504)||(24623319-24623367)
chr6 (446-509)||(1989040-1989102)
chr6 (446-505)||(12904318-12904377)
chr6 (541-588)||(16120574-16120621)
chr6 (607-646)||(22695747-22695786)
chr6 (445-495)||(1804098-1804148)
chr6 (446-504)||(13496117-13496175)
chr6 (446-504)||(25934810-25934868)
chr6 (446-504)||(26548252-26548310)
chr6 (451-489)||(26611057-26611095)
chr6 (446-499)||(6470623-6470676)
chr6 (446-507)||(24212538-24212599)
chr6 (446-499)||(28046185-28046238)
[»] chr1 (129 HSPs)
chr1 (541-817)||(28486623-28486894)
chr1 (536-808)||(23253474-23253741)
chr1 (541-802)||(1342586-1342843)
chr1 (541-802)||(1366305-1366561)
chr1 (541-817)||(38872513-38872784)
chr1 (541-808)||(28838104-28838367)
chr1 (541-801)||(47648011-47648267)
chr1 (541-817)||(50755799-50756070)
chr1 (541-817)||(44519481-44519749)
chr1 (541-817)||(38717329-38717601)
chr1 (541-817)||(45951045-45951315)
chr1 (541-665)||(5132429-5132553)
chr1 (541-808)||(17077476-17077739)
chr1 (541-756)||(6782569-6782780)
chr1 (541-763)||(36466127-36466346)
chr1 (535-802)||(40124935-40125199)
chr1 (533-665)||(2937064-2937195)
chr1 (536-817)||(14291249-14291523)
chr1 (533-763)||(37350935-37351163)
chr1 (541-808)||(14556162-14556423)
chr1 (535-789)||(32487029-32487278)
chr1 (533-802)||(36302581-36302846)
chr1 (541-665)||(47672230-47672354)
chr1 (541-817)||(38019108-38019375)
chr1 (541-808)||(30057076-30057338)
chr1 (536-665)||(2730993-2731123)
chr1 (541-663)||(49628379-49628502)
chr1 (534-665)||(32005464-32005593)
chr1 (536-652)||(5905032-5905148)
chr1 (535-665)||(36465933-36466063)
chr1 (536-665)||(39950230-39950360)
chr1 (536-665)||(38717616-38717745)
chr1 (541-665)||(1342435-1342559)
chr1 (541-665)||(5132617-5132741)
chr1 (541-665)||(17077329-17077453)
chr1 (556-665)||(25378893-25379002)
chr1 (535-663)||(29721374-29721502)
chr1 (563-664)||(39758976-39759077)
chr1 (563-664)||(39764330-39764431)
chr1 (541-665)||(6782847-6782971)
chr1 (710-817)||(25378778-25378882)
chr1 (541-665)||(28486908-28487031)
chr1 (541-665)||(45950906-45951030)
chr1 (541-665)||(47647861-47647985)
chr1 (541-596)||(44396397-44396452)
chr1 (541-659)||(37351225-37351343)
chr1 (535-665)||(39759207-39759336)
chr1 (536-665)||(23253323-23253452)
chr1 (541-665)||(32486862-32486987)
chr1 (556-652)||(2930979-2931075)
chr1 (541-763)||(7838801-7839018)
chr1 (678-817)||(29548662-29548795)
chr1 (605-665)||(52346471-52346531)
chr1 (536-652)||(25378686-25378804)
chr1 (561-663)||(30056950-30057053)
chr1 (536-663)||(36302426-36302553)
chr1 (541-665)||(49628130-49628252)
chr1 (700-817)||(5904954-5905067)
chr1 (541-591)||(29548584-29548634)
chr1 (715-808)||(39759095-39759186)
chr1 (715-808)||(39764449-39764540)
chr1 (556-665)||(2730755-2730863)
chr1 (605-665)||(29548809-29548869)
chr1 (606-665)||(1366588-1366647)
chr1 (536-665)||(5904811-5904941)
chr1 (563-665)||(15875100-15875202)
chr1 (541-659)||(52346232-52346350)
chr1 (541-639)||(39524272-39524372)
chr1 (612-665)||(47672045-47672098)
chr1 (734-817)||(2936948-2937029)
chr1 (605-665)||(40124848-40124908)
chr1 (734-817)||(47672112-47672193)
chr1 (715-817)||(2730877-2730976)
chr1 (450-509)||(4806792-4806851)
chr1 (541-665)||(14556019-14556142)
chr1 (606-665)||(29715457-29715516)
chr1 (541-591)||(4487041-4487091)
chr1 (446-504)||(13401598-13401656)
chr1 (446-500)||(15382825-15382879)
chr1 (563-665)||(50755682-50755784)
chr1 (434-491)||(5553016-5553073)
chr1 (710-763)||(25378747-25378799)
chr1 (541-665)||(28838388-28838513)
chr1 (710-763)||(44396257-44396309)
chr1 (561-665)||(44519363-44519467)
chr1 (607-646)||(2937001-2937040)
chr1 (446-509)||(3777719-3777782)
chr1 (607-646)||(5905007-5905046)
chr1 (607-646)||(25378790-25378829)
chr1 (607-646)||(32005615-32005654)
chr1 (448-515)||(35632902-35632969)
chr1 (715-817)||(39950377-39950476)
chr1 (607-646)||(39950384-39950423)
chr1 (607-646)||(49628320-49628359)
chr1 (541-591)||(1366633-1366683)
chr1 (541-806)||(29715539-29715796)
chr1 (606-652)||(38291297-38291343)
chr1 (541-646)||(38872813-38872919)
chr1 (443-505)||(52262167-52262229)
chr1 (715-808)||(52346366-52346457)
chr1 (607-652)||(29548672-29548717)
chr1 (715-788)||(49628296-49628366)
chr1 (612-664)||(7838683-7838735)
chr1 (715-763)||(32005608-32005655)
chr1 (535-591)||(47671997-47672053)
chr1 (607-646)||(2730930-2730969)
chr1 (456-491)||(3528484-3528519)
chr1 (458-505)||(16967195-16967242)
chr1 (446-505)||(17669646-17669705)
chr1 (446-509)||(23045192-23045255)
chr1 (607-646)||(29548703-29548742)
chr1 (541-588)||(32005713-32005760)
chr1 (446-509)||(32950758-32950821)
chr1 (607-646)||(39759102-39759141)
chr1 (607-646)||(39764456-39764495)
chr1 (607-646)||(44396258-44396297)
chr1 (615-646)||(47672165-47672196)
chr1 (446-504)||(3693798-3693856)
chr1 (446-504)||(10841901-10841959)
chr1 (446-508)||(30678811-30678873)
chr1 (446-504)||(33153882-33153940)
chr1 (470-512)||(42372799-42372841)
chr1 (446-504)||(43284032-43284090)
chr1 (541-583)||(52346543-52346585)
chr1 (612-665)||(14291536-14291588)
chr1 (446-491)||(16580814-16580859)
chr1 (446-503)||(34632170-34632227)
chr1 (607-652)||(44396283-44396328)
chr1 (447-504)||(50372363-50372420)
[»] chr3 (110 HSPs)
chr3 (541-789)||(47358323-47358566)
chr3 (536-817)||(40790807-40791080)
chr3 (535-817)||(11692152-11692429)
chr3 (541-808)||(16731922-16732183)
chr3 (544-817)||(51753901-51754169)
chr3 (536-817)||(21560938-21561215)
chr3 (533-808)||(33092029-33092302)
chr3 (541-806)||(40036649-40036906)
chr3 (535-802)||(19987832-19988097)
chr3 (535-763)||(27957654-27957877)
chr3 (541-763)||(29015721-29015940)
chr3 (541-817)||(34682420-34682691)
chr3 (541-665)||(21440971-21441095)
chr3 (541-665)||(49665581-49665706)
chr3 (536-763)||(16222473-16222698)
chr3 (536-665)||(44638411-44638540)
chr3 (541-763)||(51760960-51761178)
chr3 (541-663)||(47982616-47982738)
chr3 (541-663)||(47991903-47992025)
chr3 (541-663)||(48001190-48001312)
chr3 (541-663)||(48010477-48010599)
chr3 (541-646)||(35565376-35565481)
chr3 (536-652)||(44397923-44398039)
chr3 (541-808)||(55328444-55328703)
chr3 (541-652)||(23460944-23461055)
chr3 (535-646)||(29352627-29352738)
chr3 (535-730)||(38443509-38443700)
chr3 (541-646)||(3017254-3017360)
chr3 (536-652)||(40393681-40393797)
chr3 (541-665)||(51754183-51754307)
chr3 (606-813)||(54089979-54090183)
chr3 (541-652)||(31705206-31705317)
chr3 (561-665)||(27957483-27957587)
chr3 (541-665)||(38443320-38443444)
chr3 (556-668)||(44398159-44398271)
chr3 (541-665)||(47358153-47358277)
chr3 (541-665)||(54803037-54803161)
chr3 (710-817)||(40393603-40393707)
chr3 (541-663)||(16732206-16732328)
chr3 (710-807)||(23461029-23461124)
chr3 (534-665)||(34682275-34682408)
chr3 (535-665)||(40036930-40037060)
chr3 (541-730)||(51437192-51437377)
chr3 (710-817)||(44398044-44398148)
chr3 (535-665)||(51436995-51437125)
chr3 (541-591)||(54090169-54090219)
chr3 (535-665)||(3017456-3017588)
chr3 (710-817)||(3017340-3017444)
chr3 (605-665)||(11692444-11692504)
chr3 (605-665)||(21560865-21560925)
chr3 (605-665)||(29015981-29016041)
chr3 (541-665)||(54803290-54803414)
chr3 (613-763)||(26920653-26920798)
chr3 (561-663)||(29352427-29352530)
chr3 (715-817)||(38443456-38443555)
chr3 (446-504)||(2563930-2563988)
chr3 (556-665)||(21441223-21441333)
chr3 (541-663)||(35565045-35565166)
chr3 (715-808)||(49665473-49665564)
chr3 (533-659)||(52836847-52836972)
chr3 (534-663)||(54089836-54089966)
chr3 (710-763)||(31705291-31705343)
chr3 (612-665)||(51760864-51760917)
chr3 (541-665)||(16222763-16222887)
chr3 (607-663)||(35565251-35565307)
chr3 (734-817)||(35565323-35565404)
chr3 (605-665)||(40791093-40791153)
chr3 (605-665)||(47982429-47982489)
chr3 (605-665)||(47991716-47991776)
chr3 (605-665)||(48001003-48001063)
chr3 (605-665)||(48010290-48010350)
chr3 (541-665)||(55328725-55328848)
chr3 (715-817)||(51437139-51437238)
chr3 (605-663)||(49665396-49665454)
chr3 (612-665)||(26050562-26050615)
chr3 (710-817)||(29352544-29352647)
chr3 (607-646)||(23461041-23461080)
chr3 (607-646)||(31705303-31705342)
chr3 (607-646)||(40393656-40393695)
chr3 (710-761)||(44398013-44398063)
chr3 (607-646)||(49665518-49665557)
chr3 (612-663)||(52836674-52836725)
chr3 (715-801)||(52836753-52836837)
chr3 (541-591)||(44638624-44638674)
chr3 (448-502)||(47040898-47040952)
chr3 (446-503)||(29791777-29791834)
chr3 (605-665)||(40393527-40393586)
chr3 (464-504)||(41332719-41332759)
chr3 (607-646)||(3017352-3017391)
chr3 (715-817)||(21441111-21441210)
chr3 (606-665)||(23461147-23461205)
chr3 (607-646)||(44398056-44398095)
chr3 (715-817)||(47982503-47982602)
chr3 (715-817)||(47991790-47991889)
chr3 (715-817)||(48001077-48001176)
chr3 (607-646)||(54803184-54803223)
chr3 (451-489)||(4033426-4033464)
chr3 (607-641)||(21441118-21441152)
chr3 (541-591)||(23461191-23461241)
chr3 (447-505)||(28430566-28430624)
chr3 (458-504)||(33634511-33634557)
chr3 (717-763)||(35565246-35565291)
chr3 (450-504)||(43499883-43499937)
chr3 (607-645)||(44398025-44398063)
chr3 (740-817)||(48010364-48010439)
chr3 (612-646)||(52836791-52836825)
chr3 (455-504)||(31463494-31463543)
chr3 (451-508)||(43630416-43630473)
chr3 (445-494)||(53221958-53222007)
chr3 (468-509)||(53438692-53438733)
[»] chr5 (112 HSPs)
chr5 (543-817)||(17964787-17965057)
chr5 (541-817)||(2268394-2268664)
chr5 (541-817)||(26408775-26409047)
chr5 (533-808)||(25945475-25945745)
chr5 (541-789)||(5214269-5214513)
chr5 (541-817)||(18036222-18036495)
chr5 (541-817)||(38789952-38790221)
chr5 (541-808)||(8144820-8145082)
chr5 (541-818)||(20166065-20166337)
chr5 (535-789)||(4620838-4621086)
chr5 (541-817)||(23910437-23910710)
chr5 (535-665)||(11062345-11062475)
chr5 (541-817)||(8343045-8343310)
chr5 (541-730)||(39412155-39412341)
chr5 (536-789)||(15440518-15440764)
chr5 (612-817)||(23592621-23592820)
chr5 (535-763)||(4717008-4717229)
chr5 (541-807)||(22619597-22619843)
chr5 (541-663)||(18674136-18674258)
chr5 (556-807)||(13198030-13198279)
chr5 (536-665)||(18705780-18705909)
chr5 (536-652)||(38245040-38245156)
chr5 (541-665)||(34929541-34929663)
chr5 (541-665)||(3578002-3578127)
chr5 (536-665)||(23910293-23910422)
chr5 (561-665)||(16968971-16969075)
chr5 (541-665)||(18705526-18705650)
chr5 (541-665)||(20166352-20166476)
chr5 (541-665)||(26408640-26408764)
chr5 (541-665)||(31912936-31913059)
chr5 (541-663)||(9177147-9177269)
chr5 (535-665)||(27858385-27858515)
chr5 (541-802)||(973981-974236)
chr5 (556-665)||(25945347-25945456)
chr5 (557-802)||(5907413-5907653)
chr5 (535-665)||(30491890-30492024)
chr5 (536-665)||(39412405-39412534)
chr5 (536-665)||(5907258-5907386)
chr5 (561-665)||(8144696-8144800)
chr5 (541-665)||(15442905-15443029)
chr5 (533-665)||(16968709-16968841)
chr5 (561-665)||(22619470-22619574)
chr5 (541-665)||(23592483-23592607)
chr5 (710-817)||(38244962-38245066)
chr5 (605-802)||(13667522-13667714)
chr5 (541-659)||(8343321-8343439)
chr5 (541-763)||(2033741-2033960)
chr5 (541-665)||(4716821-4716945)
chr5 (541-665)||(11062604-11062728)
chr5 (561-665)||(17964672-17964776)
chr5 (612-806)||(21747811-21747999)
chr5 (541-665)||(973829-973954)
chr5 (536-665)||(31912701-31912830)
chr5 (536-665)||(32792361-32792490)
chr5 (715-817)||(18705664-18705763)
chr5 (710-800)||(27858545-27858633)
chr5 (715-817)||(39412295-39412394)
chr5 (535-628)||(2268224-2268317)
chr5 (612-665)||(5214552-5214605)
chr5 (612-665)||(38790235-38790288)
chr5 (561-665)||(3023420-3023521)
chr5 (734-817)||(18674021-18674102)
chr5 (605-665)||(32792615-32792675)
chr5 (605-665)||(38244890-38244950)
chr5 (715-817)||(11062491-11062590)
chr5 (606-665)||(13197948-13198007)
chr5 (715-801)||(16968856-16968940)
chr5 (605-668)||(18036505-18036568)
chr5 (734-808)||(30492057-30492130)
chr5 (541-639)||(9176961-9177059)
chr5 (541-652)||(27858607-27858717)
chr5 (607-802)||(5950522-5950712)
chr5 (606-663)||(30492156-30492213)
chr5 (605-665)||(2268323-2268383)
chr5 (715-806)||(3578144-3578233)
chr5 (607-646)||(18674074-18674113)
chr5 (607-646)||(18705717-18705756)
chr5 (607-646)||(23592674-23592713)
chr5 (607-646)||(32792553-32792592)
chr5 (446-505)||(37791164-37791223)
chr5 (607-646)||(38245015-38245054)
chr5 (605-659)||(3578250-3578304)
chr5 (537-591)||(13197908-13197962)
chr5 (450-504)||(29695020-29695074)
chr5 (612-646)||(30492051-30492085)
chr5 (612-646)||(31912874-31912908)
chr5 (606-663)||(18673949-18674006)
chr5 (607-652)||(23592699-23592744)
chr5 (450-491)||(24443114-24443155)
chr5 (469-509)||(3052303-3052343)
chr5 (715-763)||(32792552-32792599)
chr5 (607-646)||(3578151-3578190)
chr5 (607-646)||(11062498-11062537)
chr5 (607-646)||(16968863-16968902)
chr5 (446-505)||(22394036-22394095)
chr5 (607-646)||(27858582-27858621)
chr5 (446-505)||(30488926-30488985)
chr5 (450-504)||(689552-689606)
chr5 (446-504)||(1538810-1538868)
chr5 (733-763)||(3023589-3023619)
chr5 (612-646)||(3023590-3023624)
chr5 (612-646)||(4620756-4620790)
chr5 (541-591)||(5214597-5214647)
chr5 (446-508)||(18430998-18431060)
chr5 (446-492)||(29962359-29962405)
chr5 (446-492)||(30012393-30012439)
chr5 (446-508)||(37614425-37614487)
chr5 (612-665)||(2034026-2034079)
chr5 (448-493)||(12159414-12159459)
chr5 (476-505)||(29904452-29904481)
chr5 (734-763)||(31912873-31912902)
chr5 (446-491)||(42515808-42515853)
[»] scaffold0302 (2 HSPs)
scaffold0302 (541-817)||(14265-14535)
scaffold0302 (541-665)||(14128-14252)
[»] scaffold0651 (2 HSPs)
scaffold0651 (541-817)||(6169-6437)
scaffold0651 (536-661)||(6028-6152)
[»] chr2 (109 HSPs)
chr2 (536-817)||(18707662-18707938)
chr2 (541-802)||(32503982-32504240)
chr2 (535-817)||(970578-970854)
chr2 (541-817)||(33850594-33850864)
chr2 (533-763)||(11108599-11108825)
chr2 (541-817)||(2098295-2098566)
chr2 (541-817)||(14102575-14102847)
chr2 (541-756)||(3952111-3952324)
chr2 (536-763)||(32927904-32928129)
chr2 (541-763)||(18906927-18907146)
chr2 (533-762)||(4902790-4903016)
chr2 (541-754)||(9777171-9777382)
chr2 (546-763)||(32653822-32654037)
chr2 (541-817)||(4831116-4831390)
chr2 (541-808)||(42813878-42814143)
chr2 (535-808)||(14827495-14827762)
chr2 (541-763)||(41186252-41186468)
chr2 (541-801)||(7900263-7900520)
chr2 (534-665)||(11277991-11278122)
chr2 (541-763)||(25263545-25263759)
chr2 (541-646)||(40691399-40691504)
chr2 (541-749)||(5674199-5674403)
chr2 (541-817)||(28625466-28625738)
chr2 (541-665)||(34825685-34825809)
chr2 (541-665)||(430576-430698)
chr2 (541-730)||(45002967-45003152)
chr2 (533-668)||(33850448-33850583)
chr2 (536-665)||(3963308-3963440)
chr2 (541-730)||(39060409-39060593)
chr2 (556-668)||(970455-970567)
chr2 (541-665)||(18478579-18478703)
chr2 (541-665)||(34825970-34826094)
chr2 (541-665)||(40691570-40691694)
chr2 (534-665)||(42434934-42435066)
chr2 (541-665)||(42814242-42814366)
chr2 (534-665)||(4902619-4902749)
chr2 (534-665)||(4950017-4950147)
chr2 (541-646)||(18478379-18478484)
chr2 (621-817)||(25251588-25251772)
chr2 (541-665)||(430805-430929)
chr2 (541-665)||(8031305-8031429)
chr2 (541-665)||(32504267-32504391)
chr2 (710-817)||(32927821-32927925)
chr2 (541-665)||(8031074-8031199)
chr2 (535-646)||(19591660-19591771)
chr2 (541-665)||(11108410-11108534)
chr2 (605-665)||(11278250-11278310)
chr2 (533-665)||(14102860-14102992)
chr2 (541-665)||(14827782-14827906)
chr2 (536-665)||(3963051-3963180)
chr2 (541-663)||(32654105-32654226)
chr2 (541-665)||(4831404-4831528)
chr2 (605-665)||(18707591-18707651)
chr2 (734-817)||(40691476-40691557)
chr2 (606-665)||(2098580-2098639)
chr2 (541-652)||(16265670-16265780)
chr2 (606-665)||(32927749-32927808)
chr2 (710-806)||(18478464-18478558)
chr2 (612-665)||(25251522-25251575)
chr2 (612-665)||(28625751-28625804)
chr2 (715-802)||(3963207-3963292)
chr2 (605-665)||(18907210-18907270)
chr2 (458-509)||(43305906-43305957)
chr2 (541-591)||(32927713-32927763)
chr2 (534-591)||(2098625-2098682)
chr2 (607-648)||(4902788-4902829)
chr2 (607-648)||(4950186-4950227)
chr2 (713-762)||(4950188-4950236)
chr2 (541-665)||(41186531-41186656)
chr2 (612-665)||(42434751-42434804)
chr2 (605-665)||(7900546-7900606)
chr2 (541-640)||(9776974-9777074)
chr2 (607-646)||(430724-430763)
chr2 (456-503)||(3196571-3196618)
chr2 (734-808)||(11278155-11278228)
chr2 (607-646)||(25251641-25251680)
chr2 (607-646)||(32927874-32927913)
chr2 (541-668)||(39060654-39060781)
chr2 (541-648)||(45002848-45002954)
chr2 (541-591)||(18707496-18707546)
chr2 (446-504)||(29896296-29896354)
chr2 (607-648)||(3963244-3963285)
chr2 (710-755)||(16265652-16265696)
chr2 (448-505)||(19159944-19160001)
chr2 (607-652)||(32927899-32927944)
chr2 (446-515)||(40967362-40967431)
chr2 (734-817)||(42814147-42814229)
chr2 (715-763)||(430717-430764)
chr2 (476-516)||(14414882-14414922)
chr2 (456-504)||(24581019-24581067)
chr2 (450-502)||(31166111-31166163)
chr2 (715-802)||(39060547-39060632)
chr2 (715-763)||(45002966-45003013)
chr2 (607-646)||(8031223-8031262)
chr2 (536-591)||(16265583-16265638)
chr2 (446-508)||(3323687-3323749)
chr2 (605-659)||(9791487-9791541)
chr2 (612-646)||(11278149-11278183)
chr2 (446-500)||(12893250-12893304)
chr2 (446-500)||(37320523-37320577)
chr2 (446-492)||(41682401-41682447)
chr2 (717-802)||(42434831-42434914)
chr2 (450-504)||(44694693-44694747)
chr2 (457-503)||(45256141-45256187)
chr2 (612-665)||(3951993-3952046)
chr2 (446-507)||(7121759-7121820)
chr2 (607-652)||(34825835-34825880)
chr2 (471-504)||(35281213-35281246)
chr2 (450-491)||(41853370-41853411)
[»] scaffold0079 (2 HSPs)
scaffold0079 (541-817)||(57392-57664)
scaffold0079 (541-668)||(57674-57801)
[»] chr8 (87 HSPs)
chr8 (536-817)||(30794917-30795193)
chr8 (541-808)||(32538922-32539185)
chr8 (536-808)||(10837314-10837584)
chr8 (535-817)||(42216252-42216528)
chr8 (541-817)||(43857591-43857865)
chr8 (541-763)||(9855498-9855717)
chr8 (541-763)||(34181157-34181378)
chr8 (541-808)||(37405876-37406138)
chr8 (541-807)||(17696748-17697011)
chr8 (541-665)||(7050472-7050596)
chr8 (541-665)||(10495976-10496100)
chr8 (536-663)||(27696955-27697082)
chr8 (541-817)||(2056862-2057134)
chr8 (541-665)||(4528644-4528769)
chr8 (536-763)||(26695406-26695627)
chr8 (536-668)||(2705161-2705292)
chr8 (541-763)||(7229971-7230189)
chr8 (541-652)||(2232922-2233032)
chr8 (541-665)||(7050811-7050935)
chr8 (535-665)||(10495719-10495849)
chr8 (556-665)||(37406158-37406267)
chr8 (536-665)||(42216542-42216671)
chr8 (561-665)||(7678527-7678631)
chr8 (541-665)||(26695692-26695816)
chr8 (540-663)||(2056722-2056845)
chr8 (533-659)||(17696605-17696731)
chr8 (541-659)||(32923985-32924102)
chr8 (541-665)||(27696699-27696823)
chr8 (541-665)||(7678278-7678401)
chr8 (536-663)||(34181421-34181547)
chr8 (607-665)||(7050623-7050681)
chr8 (710-817)||(2232844-2232948)
chr8 (541-665)||(9855310-9855434)
chr8 (536-665)||(32923722-32923850)
chr8 (557-665)||(7230254-7230364)
chr8 (541-665)||(10837169-10837292)
chr8 (606-665)||(41441453-41441512)
chr8 (605-663)||(32538841-32538899)
chr8 (612-665)||(2232777-2232830)
chr8 (734-802)||(32923879-32923946)
chr8 (715-802)||(7050701-7050786)
chr8 (448-504)||(18422455-18422511)
chr8 (710-817)||(41441524-41441628)
chr8 (541-589)||(41441636-41441684)
chr8 (535-654)||(2705436-2705555)
chr8 (715-817)||(4528787-4528886)
chr8 (445-504)||(13284267-13284326)
chr8 (736-817)||(27696838-27696917)
chr8 (612-665)||(4528900-4528953)
chr8 (612-665)||(42686276-42686329)
chr8 (446-503)||(42932231-42932288)
chr8 (715-817)||(10495862-10495960)
chr8 (607-646)||(7050708-7050747)
chr8 (448-515)||(22257106-22257173)
chr8 (541-596)||(42686026-42686081)
chr8 (446-504)||(3650521-3650579)
chr8 (737-802)||(7678438-7678502)
chr8 (541-591)||(30794810-30794860)
chr8 (612-646)||(32923918-32923952)
chr8 (446-500)||(36919312-36919366)
chr8 (541-591)||(41441417-41441467)
chr8 (612-646)||(41441577-41441611)
chr8 (612-646)||(42686145-42686179)
chr8 (612-645)||(2232898-2232931)
chr8 (450-507)||(3456821-3456877)
chr8 (612-665)||(42686068-42686121)
chr8 (437-509)||(574376-574448)
chr8 (607-646)||(4528794-4528833)
chr8 (536-591)||(4528976-4529031)
chr8 (469-504)||(7147214-7147249)
chr8 (450-505)||(24202156-24202210)
chr8 (446-505)||(29293178-29293237)
chr8 (450-505)||(37141362-37141417)
chr8 (541-591)||(2232735-2232785)
chr8 (612-646)||(7678429-7678463)
chr8 (469-507)||(9070982-9071020)
chr8 (446-504)||(13357443-13357501)
chr8 (612-646)||(27696891-27696925)
chr8 (446-504)||(30417612-30417670)
chr8 (446-496)||(31085874-31085924)
chr8 (446-504)||(32115408-32115466)
chr8 (446-491)||(1877677-1877722)
chr8 (734-763)||(7678545-7678574)
chr8 (446-503)||(10982727-10982784)
chr8 (439-504)||(32421563-32421628)
chr8 (734-763)||(42686151-42686180)
chr8 (605-654)||(43857530-43857579)
[»] scaffold0044 (3 HSPs)
scaffold0044 (536-763)||(9727-9951)
scaffold0044 (606-665)||(9625-9684)
scaffold0044 (542-591)||(9590-9639)
[»] scaffold0275 (4 HSPs)
scaffold0275 (536-730)||(1264-1454)
scaffold0275 (715-817)||(1408-1507)
scaffold0275 (606-665)||(1522-1581)
scaffold0275 (556-591)||(1567-1602)
[»] scaffold0036 (2 HSPs)
scaffold0036 (541-817)||(16839-17109)
scaffold0036 (556-645)||(17142-17231)
[»] scaffold0170 (5 HSPs)
scaffold0170 (541-665)||(5512-5636)
scaffold0170 (715-817)||(5657-5756)
scaffold0170 (606-665)||(5770-5829)
scaffold0170 (535-591)||(5815-5871)
scaffold0170 (607-646)||(5664-5703)
[»] scaffold0045 (2 HSPs)
scaffold0045 (541-808)||(35337-35601)
scaffold0045 (535-659)||(35631-35755)
[»] scaffold0015 (2 HSPs)
scaffold0015 (536-761)||(49910-50131)
scaffold0015 (534-665)||(49713-49843)
[»] scaffold0825 (2 HSPs)
scaffold0825 (541-665)||(1177-1301)
scaffold0825 (607-651)||(1325-1369)
[»] scaffold0009 (3 HSPs)
scaffold0009 (541-665)||(58450-58574)
scaffold0009 (541-663)||(58707-58829)
scaffold0009 (715-817)||(58590-58689)
[»] scaffold0385 (1 HSPs)
scaffold0385 (536-730)||(12966-13156)
[»] scaffold1095 (1 HSPs)
scaffold1095 (536-596)||(22-82)
[»] scaffold0838 (1 HSPs)
scaffold0838 (541-665)||(5271-5395)
[»] scaffold0832 (1 HSPs)
scaffold0832 (541-665)||(5302-5426)
[»] scaffold0229 (1 HSPs)
scaffold0229 (541-654)||(24333-24447)
[»] scaffold0185 (3 HSPs)
scaffold0185 (535-663)||(8060-8188)
scaffold0185 (715-817)||(8205-8304)
scaffold0185 (607-646)||(8258-8297)
[»] scaffold0421 (1 HSPs)
scaffold0421 (605-663)||(3016-3074)
[»] scaffold0053 (1 HSPs)
scaffold0053 (450-503)||(14205-14258)
[»] scaffold0160 (1 HSPs)
scaffold0160 (446-504)||(22912-22970)


Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 101)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 8 - 512
Target Start/End: Complemental strand, 35523569 - 35523072
Alignment:
Q  8 agttactccacggctgtatgctaaccatgcagtcatgaaaactgccacgacggcagccgtaaggtgcagttgtggcctcatgccgatcgaagatagagtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35523569 agttactccacggctgtatgctaaccatgcagtcatgaaaactgccacgacggcagccgtaaggtgcagttgtggcctcatgccgatcgaagatagagtt 35523470  T
Q  108 ataggggagaatattgaaccaggtatattgtgcaccaaactctcttgttttttgctgctgatattatgcataagccaaagtatttcttttaataacaaaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35523469 ataggggagaatattgaaccaggtatattgtgcaccaaactctcttgttttgtgctgctgatattatgcataagccaaagtatttcttttaataacaaaa 35523370  T
Q  208 gttaggatatacattgttttnnnnnnnnnntatattactatataagttggtcatatgacgtgggtagaaaatagaatactaacttccagggtaaagtatt 307  Q
    ||||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35523369 gttaggatatacattgttttaaaaaaaaaa-atattagtatataagttggtcatatgacgtgggtagaaaatagaatactaacttccagggtaaagtatt 35523271  T
Q  308 aatttggtcaaaaaagaagtattaatttggtcaacnnnnnnnnnttttcaaggtaaagcattaatt---attattatttaatttaaaggatacatttcat 404  Q
    |||||||||||||||||||||||||||||||||||          || ||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  35523270 aatttggtcaaaaaagaagtattaatttggtcaacaaaaaaaaaattccaaggtaaagcattaattatcattattatttaatttaaaggatacatttcat 35523171  T
Q  405 actgttaataccatttaatagatgagtaatagatgtgcttatgagcttaattcagttgatataaacaatgtata--atatatgtaaggttcgaggttcaa 502  Q
    |||||||||| ||||           |||||||||| || ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  35523170 actgttaatatcatt-----------taatagatgtcctcatgagcttaattcagttgatataaacaatgtataatatatatataaggttcgaggttcaa 35523082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 541 - 813
Target Start/End: Original strand, 6626169 - 6626436
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  6626169 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 6626268  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| ||||| |||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  6626269 gtattggtccctctgttaaccttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 6626364  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| ||||| ||||| ||||    
T  6626365 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgccactccgttggttttt 6626436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 8952826 - 8952553
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||| |||||||||||||    
T  8952826 aaggtttaaatatgcctttagtgcttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaa 8952727  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| ||||    
T  8952726 tattggtattggtccctctattaactttctgttaaaaaaa--cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc 8952632  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
     ||||||||||||||||||||||||| | ||||| | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  8952631 -tgcactttgtaaaaatattgatatt-gatgcca-cgtggcgtgaaatgattgggccacgtggcactctgtt-ggttttgtgt 8952553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 38816639 - 38816381
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  38816639 ttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 38816540  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||         |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||  ||||||||    
T  38816539 gtattggtccctctgttaactttctgtt-aaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattg-gcccctgca 38816445  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||||||||     |||||||||||||| ||||||||||||| |||||    
T  38816444 ctttgtaaaaatattgatatt-ggtgccac----gcgtgaaatgattggaccacgtggcactccgttgg 38816381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 21766511 - 21766774
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  21766511 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 21766610  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| ||||||| |||||||||| ||          |||||||||||| |||||||| ||| | ||| ||||||||||||||||||||| | ||||||    
T  21766611 gtattggtccctctgttaactttctgttaataaaaaaacacaaaactatt-ggtattgg-tccttgcac-tttgtaaaaatattggtattggt-ccctgc 21766706  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||| || |||||    
T  21766707 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcagtccgttgg 21766774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 47404260 - 47403990
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  47404260 ttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacacttttttttttttggaattggtccctgcactttgtaaaaatattg 47404161  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||| | ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  47404160 gtattggtccctctattaactttgtgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgca 47404065  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || | |||||||||| ||||||||| ||||| ||| ||||||||||    
T  47404064 ctttgtaaaaatattgatatt-ggtgcca-cgtggcatgaaatgattgggccacgtgacactccgtt-ggttttgtgt 47403990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 23999924 - 24000195
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| || | |         |||||||||||||||| |||||||||||||||||||    
T  23999924 ttaaatatgtctttagtccttgcactttcatcagattttgacattggttcctaaatttttttttgtttggaattggtcccggcactttgtaaaaatattg 24000023  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     |||||||||||||||||||||||||||          ||||||| |||| |||||||| ||||| ||| ||||||||||||||||||||||| ||||||    
T  24000024 gtattgatccctctattaactttctattaaaaaaaaaacacaaaattatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattgat-ccctgc 24000119  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| ||||| ||| ||||||||||    
T  24000120 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgacactccgtt-ggttttgtgt 24000195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 35517970 - 35517805
Alignment:
Q  9 gttactccacggctgtatgctaaccatgcagtcatgaaaactgccacgacggcagccgtaaggtgcagttgtggcctcatgc-cgatcgaagatagagtt 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| | |||| ||||||||||||    
T  35517970 gttactccacggttgtatgctaaccatgcagtcatgaaaactgccacgatggccgccgtaaggtgcagttttggcctcatccacgattgaagatagagtt 35517871  T
Q  108 ataggggagaatattgaacca--ggtatat-tgtgcaccaaactctcttgttttttgctgctgata 170  Q
    |||||||||||| ||||||||  | ||||| ||||||||||||||||||||||| |||||||||||    
T  35517870 ataggggagaattttgaaccactgatatatatgtgcaccaaactctcttgttttgtgctgctgata 35517805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 41320749 - 41320480
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  41320749 ttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 41320650  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||| | ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | ||||||     
T  41320649 gtattggtccctctattaactttttgtt-aaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgcg 41320555  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || || ||||||||| ||||||||||||||| ||| ||||||||||    
T  41320554 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgcgaaatgattgggccacgtggcactccgtt-ggttttgtgt 41320480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 44141412 - 44141629
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  44141412 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 44141511  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     |||||||||||||||||||||||| ||         |||||||||||| |||||| | ||||| ||| |||||||||||||||||||| |  | |||||    
T  44141512 gtattgatccctctattaactttctgtt-aaaaaaaacacaaaactatt-ggtattag-tccctgcac-tttgtaaaaatattggtatt-agtctctgca 44141606  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||    
T  44141607 ctttgtaaaaatattgatattgg 44141629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 35193729 - 35193467
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||        ||||||||||||||| || |||||||||||||||||    
T  35193729 ttaaatatgcctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccttgtactttgtaaaaatattg 35193630  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||||||         |||||||||||| || ||||| ||||| ||| |||||||||||||||||||| |  | |||||    
T  35193629 gtattggtccctctattaactttctattaaaaaaaaacacaaaactatt-ggcattgg-tccctgcac-tttgtaaaaatattggtatt-agtctctgca 35193534  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||| ||| | || |||||||||||| ||||||||||||||| |||||    
T  35193533 ctttgtaaaaatattgatatt-ggtacca-cgtggcgtgaaatgattaggccacgtggcactccgttgg 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 19277060 - 19276781
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaa 634  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||    
T  19277060 aaggtttaaatatatctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaa 19276961  T
Q  635 atattgatattgatccctctattaactttctatt---nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattga 731  Q
    |||||||||||| |||||||||||||||||| ||             ||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||     
T  19276960 atattgatattggtccctctattaactttctgttaaaaaaaaaacaaacaaaactatt-ggtattgg-tccctgcac-tttataaaaatattggtattgg 19276864  T
Q  732 tcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    | ||| |||||||||||||||||||||||| ||||||| |||| | |||||||||| |||||||||||| || ||| ||||||||||    
T  19276863 t-cccagcactttgtaaaaatattgatatt-ggtgcca-catggcatgaaatgattgggccacgtggcattccgtt-ggttttgtgt 19276781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 10336123 - 10336391
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||| |||         |||||||||||||||||| |||||||||||||||||    
T  10336123 ttaaatatgtgttta-tccttgcactttcatcagattttgacattggtccctacagttttttttgtttggaattggtccctgtactttgtaaaaatattg 10336221  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||  |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  10336222 gtattcgtccctctattaactttctgttaaaaaaaa-cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 10336316  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    | ||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  10336317 ccttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 10336391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 544 - 763
Target Start/End: Original strand, 26174621 - 26174836
Alignment:
Q  544 aatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgata 643  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||||||||||| ||    
T  26174621 aatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaatattggta 26174720  T
Q  644 ttgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactt 743  Q
    ||| || |||  |||||||||| ||         ||||||||||||  ||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||    
T  26174721 ttggtcactcagttaactttctgttaaaaaaaaacacaaaactatt-tgtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgcactt 26174816  T
Q  744 tgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||    
T  26174817 tgtaaaaatattgatattgg 26174836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 541 - 730
Target Start/End: Original strand, 18732641 - 18732827
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  18732641 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 18732740  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||| ||||||| |||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  18732741 gtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 18732827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 806
Target Start/End: Complemental strand, 17357015 - 17356750
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaaaatat 638  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||          |||||||||| |||||||||||||||||||||||    
T  17357015 ttaaatatgtctttagttcctgcactttcatcagattttggcattgatccctacacttgtttttttgtttggaattagtccctgcactttgtaaaaatat 17356916  T
Q  639 tgatattgatccctctattaactttctattnnnnnnnnnca---caaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    || ||||||||||||| ||||| |||| ||          |   |||||||||||| ||||||| |||| |||||| |||||||||||||||||| || |    
T  17356915 tggtattgatccctctgttaaccttctgttaaaaaaaaaaaatacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtctc 17356819  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
     ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||||||    
T  17356818 -tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactctgtt 17356750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 732
Target Start/End: Original strand, 39997647 - 39997835
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||        ||||||||||||||| ||||||||||||||||||||    
T  39997647 ttaaatatgtctttagtctttgcactttcatcagattttgacattggcccctacacttttttttgtttggaattggtccttgcactttgtaaaaatattg 39997746  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||||    
T  39997747 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattgat 39997835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 556 - 802
Target Start/End: Original strand, 47913137 - 47913381
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaatt--ggtccctgcactttgtaaaaatattgatattgatccctc 653  Q
    |||||||||||||||||||||||||||||||||||| ||||        ||||||||||  |||||||||||||||||||||||||| ||||| ||| ||    
T  47913137 gtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaatttcggtccctgcactttgtaaaaatattggtattggtccttc 47913236  T
Q  654 tattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaat 752  Q
    |||||||||||| ||          |||||||||||||| |||| || |||| |||||| |||||||||||||||||| |||| ||||||||||||||||    
T  47913237 tattaactttctgttaaaaaaaaaacacaaaactattgg-tatttgt-ccctgcacttt-gtaaaaatattggtattggtccc-tgcactttgtaaaaat 47913332  T
Q  753 attgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||  |||||| | || |||||||||||| ||||| |||||||||    
T  47913333 attgatatt-tgtgcca-cgtggcgtgaaatgattgggccatgtggcactc 47913381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 605 - 817
Target Start/End: Complemental strand, 39385058 - 39384851
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccc 703  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||          |||||||||| | |||||||| ||||    
T  39385058 gtttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaacta-tcggtattgg-tccc 39384961  T
Q  704 tacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    | ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| | || |||||||||||| || ||||||||||||    
T  39384960 tgcac-tttgtaaaaatattggtattggt-ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactc 39384865  T
Q  803 tgttgggttttgtgt 817  Q
     ||| ||||||||||    
T  39384864 cgtt-ggttttgtgt 39384851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 541 - 730
Target Start/End: Complemental strand, 36508442 - 36508256
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||| |||| ||||        ||||||||||||||||||||||||||||||||||||    
T  36508442 ttaaatatgcctttagtccttgtactttcatcagattttggtattgatccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 36508343  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  36508342 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 36508256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 39103112 - 39102987
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  39103112 ttaaatatgcctttagtcctagcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 39103013  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||||||||||||||||    
T  39103012 ggtattggtccctctattaactttct 39102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 542 - 665
Target Start/End: Original strand, 24164017 - 24164141
Alignment:
Q  542 taaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||         || |||||||||||||||||||||||||||||||||    
T  24164017 taaatatgtctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtctggaattggtccctgcactttgtaaaaatattg 24164116  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || |||||||||||||||    
T  24164117 gtattggtcactctattaactttct 24164141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 659
Target Start/End: Complemental strand, 21276674 - 21276556
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  21276674 ttaaatatgtctttagtccctgcactttcataagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 21276575  T
Q  641 atattgatccctctattaa 659  Q
     ||||||||||||| ||||    
T  21276574 gtattgatccctctgttaa 21276556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 541 - 802
Target Start/End: Original strand, 21438246 - 21438501
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||    
T  21438246 ttaaatatgtcttta-tccctgcactttcatcagattttggcattggtccctacattttttttt-tttggaattggtccctgcactttgtaaaaatattg 21438343  T
Q  641 atattgatccctctattaactttctattnnnnnnnnnc-acaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    |||||| ||||||| |||||||||| ||           ||||||  ||||| |||| || |||| |||||| ||||||||||| |||||| |||  |||    
T  21438344 atattggtccctctgttaactttctgttaaaaaaaaaatacaaaaagattgg-tattagt-ccctgcacttt-gtaaaaatattagtattggtcca-tgc 21438439  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| | ||  ||||||||||| |||||||||||||||    
T  21438440 actttgtaaaaatattgatatt-ggtgcca-cgtggtgtgaaatgattgggccacgtggcactc 21438501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 542 - 668
Target Start/End: Complemental strand, 24000331 - 24000205
Alignment:
Q  542 taaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattga 641  Q
    ||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||     
T  24000331 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattgg 24000232  T
Q  642 tattgatccctctattaactttctatt 668  Q
    ||||| ||||||| |||||||||||||    
T  24000231 tattggtccctctgttaactttctatt 24000205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 31657421 - 31657545
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||| | |||||||||||||||||||| ||||||| || ||||        ||||||||||| ||||||||||||||||||||||||    
T  31657421 ttaaatatgcctttagttcctgcactttcatcagattttgtcattggttcctacacttttttttgtttggaattgatccctgcactttgtaaaaatattg 31657520  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||| ||||| ||||    
T  31657521 gtattgatccctctgttaaccttct 31657545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 48863287 - 48863411
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||         ||||||||||| ||| ||||||||||||||||||||    
T  48863287 ttaaatatgcctttagtccctgcactttcctcagattttggcattggtccctacatttttttttgtttggaattgatccatgcactttgtaaaaatattg 48863386  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  48863387 gtattggtccctctgttaactttct 48863411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 533 - 665
Target Start/End: Original strand, 6607631 - 6607763
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||| |||| || |||| |||||||||||| ||||||||||||||||||  |||        |||||| |||| ||||||||||||||||    
T  6607631 ataaaggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaa 6607730  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||| ||||||||||    
T  6607731 aaatattggtattggtccctctgttaactttct 6607763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 646
Target Start/End: Complemental strand, 6607931 - 6607824
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac--nnnnnnnngtttggaattggtccctgcactttgtaaaaatat 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||| |||||||||||||||||||||||||||    
T  6607931 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacactttgtaaaaatattggtattggtccctgcactttgtaaaaatat 6607832  T
Q  639 tgatattg 646  Q
    ||||||||    
T  6607831 tgatattg 6607824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 10336528 - 10336404
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||| |||||  |||        |||||| |||||||||||||||||||||||||||||    
T  10336528 ttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 10336429  T
Q  641 atattgatccctctattaactttct 665  Q
     |||||||| |||| ||||||||||    
T  10336428 gtattgatctctctgttaactttct 10336404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 24164394 - 24164270
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| | |||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  24164394 ttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 24164295  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  24164294 gtattggtccctctgttaactttct 24164270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 31849440 - 31849558
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||    
T  31849440 ttaaatatgcatttagtccctgcactttcatcagattttggcattggtccctacatttt------tttggaattggtccctgcactttgtaaaaatattg 31849533  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||  ||||||| ||||||||||    
T  31849534 gtattcgtccctctgttaactttct 31849558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 31849807 - 31849683
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||| |||||||||||||||||    
T  31849807 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgtactttgtaaaaatattg 31849708  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  31849707 gtattggtccctctgttaactttct 31849683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 36508067 - 36508191
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||||| ||||||||||||||||||||||||| ||  |||        |||||| |||||||||||||||||||||||||||||    
T  36508067 ttaaatgtgtcattggtccttgtactttcatcagattttggcattggtacctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 36508166  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  36508167 gtattggtccctctgttaactttct 36508191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 39102802 - 39102926
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||| |  |||        |||||| |||||||||||||||||||||||||||||    
T  39102802 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 39102901  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  39102902 gtattggtccctctgttaactttct 39102926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 6626582 - 6626453
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||| ||||||||||||||||||  |||        |||||| ||||||| ||||||||||||||||    
T  6626582 aaggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcacttttttttgtttggcattggtcactgcactttgtaaaaa 6626483  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  6626482 tattggtattggtccctctgttaactttct 6626453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 47913516 - 47913407
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||| ||||||||||||||||||||| ||||| |||||||     
T  47913516 gtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtctctgcactttgtaaaaatattggtattggtccctctg 47913417  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  47913416 ttaactttct 47913407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 652
Target Start/End: Complemental strand, 1795774 - 1795658
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||| |||||||||   |||||||||||||||||||||||| ||||| |||         |||||||||||||| ||| ||||||||||||    
T  1795774 aagggttaaatatatctttagtctcagcactttcatcagattttggcattagtccctacatttttttttgtttggaattggtctctgtactttgtaaaaa 1795675  T
Q  636 tattgatattgatccct 652  Q
    |||||||||||||||||    
T  1795674 tattgatattgatccct 1795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 19276642 - 19276766
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||  |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  19276642 ttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcactttattttgtttggcattggtccctgcactttgtaaaaatattg 19276741  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  19276742 gtattggtccctctgttaactttct 19276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 21766920 - 21766797
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| || ||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  21766920 ttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaaaatattg 21766822  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  21766821 gtattggtccctctgttaactttct 21766797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 31657803 - 31657674
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||| ||||| |||||||||||  |||        |||||| ||||||||||||||||||||||||    
T  31657803 aaggtttaaatgtgtcattggtccctgcactttcatcaaattttagcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 31657704  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| |||||||  |||||||||    
T  31657703 tattggtattggtccctctgctaactttct 31657674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 38567501 - 38567626
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||| ||| |||||||| ||||||||||||||||| ||||         ||||||||||| ||| || ||||||||||||||||    
T  38567501 ttaaatatgcctttagtcctcgcattttcatcatattttggcattggtccctacactttttttttgtttggaattgatccatgtactttgtaaaaatatt 38567600  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| | ||||||||||||||||    
T  38567601 ggtattggttcctctattaactttct 38567626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 38816240 - 38816364
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| ||| |||||||||||||||||||||||||    
T  38816240 ttaaatgtgtcattggtccctgcactttcatcagattttggaattggtccctgcacttttttttgtttggcattagtccctgcactttgtaaaaatattg 38816339  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||| ||| ||||||||||    
T  38816340 gtattggtccatctgttaactttct 38816364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 562 - 665
Target Start/End: Complemental strand, 39998000 - 39997897
Alignment:
Q  562 gcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaact 661  Q
    ||||||||||||||||||||||||||| |   |||        |||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  39998000 gcactttcatcagattttggcattggttcatgcacttttttttgtttggcattggaccctgcactttgtaaaaatattggtattgatccctctgttaact 39997901  T
Q  662 ttct 665  Q
    ||||    
T  39997900 ttct 39997897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 646
Target Start/End: Complemental strand, 2765349 - 2765244
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||         |||||||||| ||| ||||||||||||||||||||    
T  2765349 ttaaatatgtctttagtccttgcactttcatcaaattttgacattggt-cctacactttttttttgtttggaatttgtctctgcactttgtaaaaatatt 2765251  T
Q  640 gatattg 646  Q
    |||||||    
T  2765250 gatattg 2765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 700 - 801
Target Start/End: Complemental strand, 6607884 - 6607786
Alignment:
Q  700 tccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggc 798  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||| ||| |||||||||||    
T  6607884 tccctacacttt-gtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaataattgggccacgtggc 6607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 26175002 - 26174877
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||||   |||         |||||| |||| |||||||||||||||||||||||    
T  26175002 ttaaatgtgtcatttgtccctgcactttcatcagattttggcattggtccttgcactttttttttgtttggcattgatccctgcactttgtaaaaatatt 26174903  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||||| ||||||||||    
T  26174902 ggtattggtccctctgttaactttct 26174877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 659
Target Start/End: Original strand, 2765079 - 2765182
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| ||||||||||||||||||||| |||||| ||  |||        |||||  ||||||||||||||||||||||||||||||||||| |||||||     
T  2765079 gtccctgcactttcatcagattttggtattggttcctgcacttttttttgtttgacattggtccctgcactttgtaaaaatattgatattggtccctctg 2765178  T
Q  656 ttaa 659  Q
    ||||    
T  2765179 ttaa 2765182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 18732781 - 18732880
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  18732781 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 18732876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 8952435 - 8952542
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||||||||||||||| ||||||||||  |||        |||||| ||||||||||||||||||| ||||||||| ||||| |||||||     
T  8952435 gtccctgcactttcatcagattttg-cattggtccctgcacttttttttgtttggcattggtccctgcactttgt-aaaatattggtattggtccctctg 8952532  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  8952533 ttaactttct 8952542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 21438656 - 21438527
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| ||  ||| |||||||||||||||||||||||||||||||  |||        |||||  | ||||||||| ||||||||||||    
T  21438656 aaggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgccactggtccctgtactttgtaaaaa 21438557  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||| ||| ||||||||||    
T  21438556 tattggtattggtccttctgttaactttct 21438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 38567641 - 38567731
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttg 807  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||||    
T  38567641 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttg 38567731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 802
Target Start/End: Complemental strand, 21276545 - 21276460
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  21276545 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 21276460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 817
Target Start/End: Original strand, 24164177 - 24164258
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  24164177 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 24164258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 35193341 - 35193445
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||| ||||||||||||||||||  |||        |||||| |||||| |||||||||||||||||||||  ||||| ||||||| ||||     
T  35193341 tgcactttcatcggattttggcattggtccctgcacttttttttgtttggcattggttcctgcactttgtaaaaatattagtattggtccctctgttaat 35193440  T
Q  661 tttct 665  Q
    |||||    
T  35193441 tttct 35193445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 44141756 - 44141696
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||    
T  44141756 gtttggcattggtccctgtactttgtaaaaatattggtattggtccctctgttaactttct 44141696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 47403866 - 47403977
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnng--tttggaattggtccctgcactttgtaaaaatattgatattgatccctc 653  Q
    |||| |||||||||||||||||||||||||| ||||  |||        |  ||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  47403866 gtccctgcactttcatcagattttggcattgatccctgcactttcatcggattttggtattggtccctgcattttgtaaaaatattggtattggtccctc 47403965  T
Q  654 tattaactttct 665  Q
    | ||||||||||    
T  47403966 tgttaactttct 47403977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 36508302 - 36508203
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgat-tggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||  ||||||||||||||| ||| ||||||    
T  36508302 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtgtcgtgaaatgatggggccacgtggcactccgtt-ggtttt 36508207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 41320406 - 41320465
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||| |||||    
T  41320406 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaattttct 41320465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 591
Target Start/End: Complemental strand, 48863560 - 48863505
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| |||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  48863560 aaggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccc 48863505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 29726801 - 29726859
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| |||||||| || |||||||||||||||||| |||||||| |||||||||    
T  29726801 tgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggttcaaac 29726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 802
Target Start/End: Complemental strand, 1795684 - 1795594
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||  ||||| ||||||| |||| | |||||||||| ||||||||| |||||    
T  1795684 tttgtaaaaatattgatattgatccc-tgcactttgtaaaaatatatatatt-ggtgcca-catggcatgaaatgattgggccacgtgacactc 1795594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 38567863 - 38567752
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnng--tttggaattggtccctgcactttgtaaaaatattgatattgatccctc 653  Q
    |||| |||||||||||||||||||||||||||||||  |||        |  ||||  ||||||||||||| ||||||||||||||| ||||  ||||||    
T  38567863 gtccctgcactttcatcagattttggcattggtccctgcacttttatcagattttgacattggtccctgcattttgtaaaaatattggtattagtccctc 38567764  T
Q  654 tattaactttct 665  Q
    | ||||||||||    
T  38567763 tgttaactttct 38567752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 536 - 659
Target Start/End: Original strand, 1795438 - 1795561
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||| ||||||| ||||||||   |||        |||||| |||| |||||||||||||||||||    
T  1795438 aaggtttaaatgtgtcattggtccctgcactttcatcaaattttggaattggtccatgcacttttttttgtttggcattgatccctgcactttgtaaaaa 1795537  T
Q  636 tattgatattgatccctctattaa 659  Q
    ||||| ||||| || |||| ||||    
T  1795538 tattggtattggtcactctgttaa 1795561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 21276374 - 21276433
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| |||||||  |||||||||    
T  21276374 tttggcattggtctctgcactttgtaaaaatattggtattggtccctctgctaactttct 21276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 21276538 - 21276499
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  21276538 ttggtattggtccctgcactttgtaaaaatattgatattg 21276499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 23221393 - 23221452
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||| ||||||| || | |||||| ||||||||||||||||||| ||||||||||    
T  23221393 tgagcttaactcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaact 23221452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 31657569 - 31657608
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  31657569 ttggtattggtccctgcactttgtaaaaatattgatattg 31657608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 38567648 - 38567687
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38567648 ttggtattggtccctgcactttgtaaaaatattgatattg 38567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 39997787 - 39997886
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| | ||||| | || |||||||||||| ||||| ||||||||| ||| ||||||    
T  39997787 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-gatgcca-cgtggcgtgaaatgattgggccatgtggcactccgtt-ggtttt 39997882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 44718873 - 44718810
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    |||| |||| ||| |||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  44718873 tgagtttaactcaattgatataaacaatatataatatatgcaagattcggggttcaaacttcga 44718810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 817
Target Start/End: Complemental strand, 2765270 - 2765191
Alignment:
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| ||||| ||| ||||||||||    
T  2765270 ctgcactttgtaaaaatattgatatt-ggtgcca-cgtgacgtgaaatgattgggccacgtgccactccgtt-ggttttgtgt 2765191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 18046047 - 18046097
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  18046047 ttaaatatgtgattagtccctgcactttcatcaaattttggcattggtccc 18046097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 24164171 - 24164205
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  24164171 attggtccctgcactttgtaaaaatattgatattg 24164205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 25251511 - 25251569
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||| ||||||||||| ||||||||| ||||||| | |||||||||    
T  25251511 tgagcttaactcagttggtataaacaatgcataatatatataaggtttggggttcaaac 25251569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 27279459 - 27279405
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||| |||||||  |||| |||||||||||||||||||||||| |||||||||||    
T  27279459 cttagttcagttagtatagacaatgtataatatatgtaaggtttgaggttcaaac 27279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 646
Target Start/End: Original strand, 39384709 - 39384819
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| || ||| |||| || |||| ||||||||||||||||||||||||| |||||  |||        |||||| |||||||| ||||||||||||||    
T  39384709 aaaggtttgaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttt-gtttggcattggtccttgcactttgtaaaa 39384807  T
Q  635 atattgatattg 646  Q
    |||||| |||||    
T  39384808 atattggtattg 39384819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 17356676 - 17356729
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||  |||||||||    
T  17356676 attggtccctgcactttgtaaaaatattggtattggtccttctgctaactttct 17356729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 23177943 - 23178000
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    |||||||||||| ||||||||||| ||||||||||||||  |||||| | ||||||||    
T  23177943 tgagcttaattcggttgatataaataatgtataatatatacaaggttagtggttcaaa 23178000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 26980996 - 26980951
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  26980996 tgagcttaactcagttgatatgaacaatgtatattatatgtaaggt 26980951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 535 - 591
Target Start/End: Complemental strand, 5850890 - 5850834
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||| |||||| |||| || |||| | |||||||||||||||||||||||||||||    
T  5850890 aaaggtttaaatgtgtcgttggtccatacactttcatcagattttggcattggtccc 5850834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 763
Target Start/End: Original strand, 31657562 - 31657609
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  31657562 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg 31657609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 734 - 801
Target Start/End: Original strand, 31849590 - 31849656
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcact 801  Q
    |||||||||||||||||||||||||||| ||||||| | ||  ||||||||||| ||||||||||||||    
T  31849590 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggtgtgaaatgattgggccacgtggcact 31849656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 42227842 - 42227806
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||| ||||||||||||||||||||||||||||||    
T  42227842 acaatgcataatatatgtaaggttcgaggttcaaact 42227806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 491
Target Start/End: Original strand, 15015240 - 15015287
Alignment:
Q  444 tatgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  15015240 tatgagcttaactcagttgataagaacaatgcataatatatgtaaggt 15015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Complemental strand, 24099281 - 24099242
Alignment:
Q  460 ttgatataaacaatgtataatatatgtaaggttcgaggtt 499  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  24099281 ttgatataaacaatgcataatatatgtaaggttcggggtt 24099242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 38911300 - 38911359
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||| |||||||||| | ||||||||||||||||| |||||| || |||| ||||    
T  38911300 tgagcttaactcagttgataaagacaatgtataatatatgcaaggtttgaagttcgaact 38911359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 591
Target Start/End: Original strand, 41320385 - 41320420
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| |||||||||||||||||||||||||||||||    
T  41320385 gtccctgcactttcatcagattttggcattggtccc 41320420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 606 - 640
Target Start/End: Complemental strand, 5850848 - 5850814
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||| |||||||||||||||||||||||||||||    
T  5850848 tttggcattggtccctgcactttgtaaaaatattg 5850814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 6607895 - 6607849
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    ||||| |||||||||| |||||||||||||||||| ||||| |||||    
T  6607895 tttggcattggtccctacactttgtaaaaatattggtattggtccct 6607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 18732965 - 18732931
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||||||||||||||||||||||||||| |||||    
T  18732965 attggtccctgcactttgtaaaaatattggtattg 18732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 616 - 646
Target Start/End: Original strand, 31849588 - 31849618
Alignment:
Q  616 gtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||    
T  31849588 gtccctgcactttgtaaaaatattgatattg 31849618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 456 - 502
Target Start/End: Complemental strand, 41250097 - 41250051
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaa 502  Q
    ||||||||||  |||||||||||||||||| ||||| ||||||||||    
T  41250097 tcagttgataagaacaatgtataatatatgcaaggtccgaggttcaa 41250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 43539164 - 43539106
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||  ||||||||||  ||||||| |||||||||||||||| || |||||||||    
T  43539164 tgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaac 43539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 763
Target Start/End: Original strand, 2765141 - 2765170
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||||||||    
T  2765141 ccctgcactttgtaaaaatattgatattgg 2765170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 19684267 - 19684226
Alignment:
Q  451 ttaattcagttgatataaacaatgtataatatatgtaaggtt 492  Q
    |||| |||||||||||| |||||| |||||||||||||||||    
T  19684267 ttaactcagttgatatagacaatgcataatatatgtaaggtt 19684226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 21136832 - 21136888
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||| ||||||| |||  ||||||||||||||||| |||||| ||||||||||    
T  21136832 tgagcttaactcagttggtatggacaatgtataatatatgcaaggtt-gaggttcaaa 21136888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 34000263 - 34000320
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||| ||||||||||   | |||| ||||||||||||||||||| ||||||||    
T  34000263 tgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttcaaa 34000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 39106723 - 39106666
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    |||| |||||| ||||||||| || |||| |||| ||||| |||||||||||||||||    
T  39106723 tgagtttaattaagttgatatgaataatgcataaaatatgcaaggttcgaggttcaaa 39106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 505
Target Start/End: Complemental strand, 40449358 - 40449329
Alignment:
Q  476 ataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||||||||||||||||||||||||    
T  40449358 ataatatatgtaaggttcgaggttcaaact 40449329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 502
Target Start/End: Complemental strand, 45272369 - 45272336
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaa 502  Q
    ||||||||| ||||||||||||||||||||||||    
T  45272369 acaatgtatgatatatgtaaggttcgaggttcaa 45272336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 140)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 533 - 817
Target Start/End: Complemental strand, 49264291 - 49264013
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||        ||||| |||||||||||| |||||||||    
T  49264291 ataaaggtttaaatatgtctttcgtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgtaattggtccctgtactttgtaa 49264192  T
Q  633 aaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    |||||||| ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |    
T  49264191 aaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggt 49264095  T
Q  733 cccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  49264094 ccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 49264013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 1613944 - 1614213
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  1613944 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 1614043  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  1614044 gtattggtccctctattaactttctgttaaaaaaaa-cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 1614138  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  1614139 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 1614213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 47690701 - 47690445
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||||| ||||||||||||||||||    
T  47690701 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaatattg 47690602  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||||||||||| ||||| |||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||  |||| ||||    
T  47690601 gtattgatccctctgttaaccttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattagtccc-tgca 47690506  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  47690505 ctttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggccacgtggcactc 47690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 31317261 - 31317529
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  31317261 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaatattg 31317359  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||||||||||||||  |         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| |  ||||||    
T  31317360 gtattggtccctctattaactttct-gtaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-tcctgca 31317454  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  31317455 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 31317529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 18436793 - 18437061
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  18436793 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaatattg 18436891  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||         |||||||||||||| ||||| | |||| |||||| |||||||||||||||||| |||| ||||    
T  18436892 gtattggtccctctgttaactttctgttaaaaaaaa-cacaaaactattgg-tattgat-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 18436986  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||| ||| ||||||||||    
T  18436987 ctttgtaaaaatattgatatt-ggtgcca-catgacgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 18437061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 321651 - 321920
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||         |||||| ||||||||||||||||||||||||||||    
T  321651 ttaaatatgtttttagtccttacactttcatcagattttggcattggtccctacacttttttttatttggagttggtccctgcactttgtaaaaatattg 321750  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||||||         |||||||||||| | |||||||| ||| ||| ||||||||||||||| ||||| | |||||||    
T  321751 gtattggtccctctattaactttctatt-aaaaaaaacacaaaactatt-gatattggtt-cctgcac-tttgtaaaaatattgatattggt-ccctgca 321845  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  321846 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 321920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 16335468 - 16335196
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  16335468 ttaaatatgtatttagtccttacactttcatcatattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 16335369  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||||||||| ||           |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||    
T  16335368 gtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tg 16335273  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||||| ||| ||||||||||    
T  16335272 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccatgtggcactccgtt-ggttttgtgt 16335196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 801
Target Start/End: Complemental strand, 5814185 - 5813930
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  5814185 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 5814086  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||||||||||| |||||||||| ||         |||||||||||| | |||| | ||||| ||| |||||||||||||| ||||| |  |||||||    
T  5814085 gtattgatccctctgttaactttctgttaaaaaaaaacacaaaactatt-gatattag-tccctgcac-tttgtaaaaatattagtatt-agtccctgca 5813990  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcact 801  Q
    ||||||||||||||||||||| ||||||| | ||  ||||||||||| ||||||||||||||    
T  5813989 ctttgtaaaaatattgatatt-ggtgcca-cgtggtgtgaaatgattgggccacgtggcact 5813930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 41965144 - 41965413
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||    
T  41965144 ttaaatatgtctttaatccttgcactttcatcagattttggcattggtccctacattttttttt-tttggaattggtccctgcactttgtaaaaatattg 41965242  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
    |||||| | ||| |||||||||||| ||         || ||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  41965243 atattggttcctttattaactttctgttaaaaaaaaacagaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 41965338  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||| ||||||||||    
T  41965339 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactccgtt-ggttttgtgt 41965413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 43979277 - 43979539
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  43979277 ttaaatatgtctttaatccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 43979376  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||| ||||| ||          |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | ||||||    
T  43979377 gtattggtccctctattaattttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgc 43979472  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||| |||||||||||||| |||| || | || |||||||||||| ||||||||||||||| |||||    
T  43979473 actttgt-aaaatattgatatt-ggtgtca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 43979539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 42495933 - 42496151
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  42495933 ttaaatatgtctttagtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 42496032  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||||||||||| |||||||||||||          ||||||||||| |||||| | ||||  ||||||| ||||||||||||||||| | |||||||    
T  42496033 gtattgatccctctgttaactttctattaaaaaaaaatacaaaactatt-ggtattag-tccccgcactttt-taaaaatattggtattggt-ccctgca 42496128  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||| ||||||||||    
T  42496129 ctttgtaaaaattttgatattgg 42496151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 40005822 - 40005555
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||    
T  40005822 ttaaatatacctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaatattg 40005724  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | || ||||    
T  40005723 gtattggtccctctattaactttctgtt-aaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccttgca 40005629  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
     |||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| ||||||||| ||||||||||    
T  40005628 -tttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgacactctgtt-ggttttgtgt 40005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 15169383 - 15169165
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||         ||||||||||||||||||||||||||||||||||||    
T  15169383 ttaaatatgtctttagtcctggcactttcatcagattttggcgttggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaatattg 15169284  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         | |||||||||| ||| |||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  15169283 gtattggtccctctattaactttctgttaaaaaaaaacgcaaaactatt-ggtgttgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgca 15169188  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||| ||||||    
T  15169187 ctttgtaaaaatattggtattgg 15169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 13199414 - 13199196
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  13199414 ttaaatatacctttaatccttgcactttcatcagattttggcattggtccctacacttatttttgtttggaattgatccctgcactttgtaaaaatattg 13199315  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||| |||||||||||| ||          ||||||||||| |||||||| ||||| || |||||||||||||||||||||| | |||||||    
T  13199314 gtattggtccctttattaactttctgttaaaaaaaaatacaaaactatt-ggtattgg-tccctgca-ttttgtaaaaatattggtattggt-ccctgca 13199219  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||| ||||||    
T  13199218 ctttgtaaaaatattggtattgg 13199196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 53940412 - 53940630
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||| |||  | ||        ||||||||||||||| ||||||||||||||||||||    
T  53940412 ttaaatatgtctttagtccttgcacttttatcagattttgacattgatccatatacttttttttgtttggaattggtccatgcactttgtaaaaatattg 53940511  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||| |||||||||| | ||         |||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||| ||||    
T  53940512 gtattggtccctttattaactttttttttaaaaaaaacacaaaactattgg-tattggt-ccctacacttt-gtaaaaatattggtattggtccc-tgca 53940607  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||    
T  53940608 ctttgtaaaaatattgatattgg 53940630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 541 - 735
Target Start/End: Complemental strand, 45311645 - 45311454
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||         ||||||||||||||||||||||||||||||||||||    
T  45311645 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccttacatttttttttgtttggaattggtccctgcactttgtaaaaatattg 45311546  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
     ||||| |||||||||||||||||  ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  45311545 gtattggtccctctattaactttccgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggtccc 45311454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 32328444 - 32328322
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  32328444 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 32328345  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||||||||||||    
T  32328344 gtattggtccctctattaacttt 32328322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 534 - 763
Target Start/End: Original strand, 35377657 - 35377882
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||||||  ||||||||||||||||| |||||||||||| ||||||||| ||||        ||||||||||||||| |||||||||||||    
T  35377657 taaaggtttaaatatgcgtttagtccttgcacttttatcagattttggtattggtccctacacttttttttgtttggaattggtccttgcactttgtaaa 35377756  T
Q  634 aatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    ||||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| |||||  || |||||||||||||| |||||| |     
T  35377757 aatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgtac-tttgtaaaaatattagtattggt- 35377852  T
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    || | |||||||||||||||||||||||||    
T  35377853 ccatacactttgtaaaaatattgatattgg 35377882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 8444660 - 8444784
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||        ||||| ||||||||||| ||||||||||||||||||    
T  8444660 ttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctacactttgtaaaaatattg 8444759  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||||||||||||||    
T  8444760 gtattgatccctctattaactttct 8444784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 46008550 - 46008674
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||| ||||||||||||||||||||    
T  46008550 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccttgcactttgtaaaaatattg 46008649  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  46008650 gtattggtccctctattaactttct 46008674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 23206073 - 23205947
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||         |||||||||||||||||||||||||||||||||||    
T  23206073 ttaaatatgtctttagtcctttcactttcatcagattttggcattagtccctacacttttttta-tttggaattggtccctgcactttgtaaaaatattg 23205975  T
Q  641 atattgatccctctattaactttctatt 668  Q
     |||||||||||||||||||||||||||    
T  23205974 gtattgatccctctattaactttctatt 23205947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 42208209 - 42207991
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||| | ||||        ||||||||||| ||||||||||||||||||||||||    
T  42208209 ttaaatatgcctttaatccctgcactttcatcagattttggcattggtctctacacttttttttgtttggaattgatccctgcactttgtaaaaatattg 42208110  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||         |||||||||||| ||||||   ||| | ||| |||||||||||||||||||| || |||||||    
T  42208109 gtattggtccctctgttaactttctgttaaaaaaaaccacaaaactatt-ggtatt-aatccttgcac-tttgtaaaaatattggtattaat-ccctgca 42208014  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||    
T  42208013 ctttgtaaaaatattgatattgg 42207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 51893042 - 51892918
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||| ||||||||||||||||||    
T  51893042 ttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctacactttgtaaaaatattg 51892943  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  51892942 gtattggtccctctgttaactttct 51892918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 28693308 - 28693180
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||        ||||||||||||||| ||||| |||||||||    
T  28693308 aaggtttaaatatgtctttagtccttgcactttcatcagattttgtcattggtccctacacttttttttgtttggaattggtccttgcac-ttgtaaaaa 28693210  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||||||||||||||    
T  28693209 tattggtattggtccctctattaactttct 28693180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 51716124 - 51716344
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgac-acnnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||           ||||||||||| ||| |||||||||||||||||||    
T  51716124 ttaaatatgtctttagtccttgcactttcatcaaattttggcattggtccctactttttttttttgtttggaattgatccttgcactttgtaaaaatatt 51716223  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| ||||||| |||||||||| ||          |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||    
T  51716224 ggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctg 51716319  T
Q  739 cactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||| ||||||    
T  51716320 cactttgtaaaaatattggtattgg 51716344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 42598913 - 42599036
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  42598913 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattgatccctgcactttgtaaaaatattg 42599011  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  42599012 gtattggtccctctgttaactttct 42599036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 1922497 - 1922621
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||        ||||||||||||| | |||||||| |||||||||||    
T  1922497 ttaaatatgcctttagtccttgcactttcatcagattttggcattggttcctacacttctttttgtttggaattggttcatgcactttataaaaatattg 1922596  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  1922597 gtattggtccctctattaactttct 1922621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 536 - 659
Target Start/End: Complemental strand, 32384319 - 32384196
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||        |||||||||||||||||||||||||||||||    
T  32384319 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactttgtaaaaa 32384220  T
Q  636 tattgatattgatccctctattaa 659  Q
    ||||| ||||| || |||| ||||    
T  32384219 tattggtattggtctctctgttaa 32384196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 606 - 817
Target Start/End: Original strand, 11021375 - 11021581
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaa-ctattgggtattggttccct 704  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||  |         ||||||| ||||||| ||||||| ||||    
T  11021375 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctattaattttctgataaaaaaaaacacaaaaactattgg-tattggt-ccct 11021472  T
Q  705 acacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactct 803  Q
     |||||| |||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||     
T  11021473 gcacttt-gtaaaaatattggtattggtccc-tacactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactcc 11021568  T
Q  804 gttgggttttgtgt 817  Q
    ||| ||||||||||    
T  11021569 gtt-ggttttgtgt 11021581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 551 - 807
Target Start/End: Complemental strand, 29526645 - 29526397
Alignment:
Q  551 ctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatcc 650  Q
    |||||||||||||| |||||||||||||||| |||| |||| ||||        |||||||||||||| ||||||||||||||||||||| ||| | |||    
T  29526645 ctttagtccttgcattttcatcagattttggtattgatccctacacttttttt-gtttggaattggtctctgcactttgtaaaaatattggtatcggtcc 29526547  T
Q  651 ctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaa 750  Q
    ||||||||| ||||| ||         |||||||||||| | |||| || |||  |||||| |||||||||||||||||| |||| ||||||||||||||    
T  29526546 ctctattaattttctgttaaaaaaaa-cacaaaactatttg-tattagt-cccggcacttt-gtaaaaatattggtattggtccc-tgcactttgtaaaa 29526452  T
Q  751 atattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttg 807  Q
    ||||||||||||| ||||||  || || ||||||||||| ||||||||||||||||||    
T  29526451 atattgatattgg-tgccacg-tggcg-gaaatgattgggccacgtggcactctgttg 29526397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 45226416 - 45226293
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  45226416 ttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaatattg 45226318  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  45226317 gtattggttcctctgttaactttct 45226293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 919586 - 919331
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| | | | || ||| ||||||||||||||||| |||| ||||        |||||||||| |||||| ||||||||||||||||||    
T  919586 ttaaatatgtctttaattcctacatttttatcagattttggcattgatccctacacttatttttgtttggaattagtccctccactttgtaaaaatattg 919487  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     |||||||| |||| |||||||||| ||         ||||||| |||| | |||| || |||| |||||| |||||||||||||||||| |||| ||||    
T  919486 gtattgatctctctgttaactttctgttaaaaaaaa-cacaaaattattag-tattagt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 919392  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    ||||||||||||||||||||| ||||||| ||||  ||||||||||| ||||||||| |||||    
T  919391 ctttgtaaaaatattgatatt-ggtgcca-catggtgtgaaatgattgggccacgtgacactc 919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 30560716 - 30560584
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn---gtttggaattggtccctgcactttgtaa 632  Q
    |||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||||           ||||||||||||||||||||||||||||    
T  30560716 aaggcttaaatatgtctttagttcctgcactttcatcatattttggcattggtcccaacactttttttttttgtttggaattggtccctgcactttgtaa 30560617  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||| ||||||||||    
T  30560616 aaatattggtattggtccctctgttaactttct 30560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 52096569 - 52096786
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||        ||||||||||||||||| ||||||||||||||||||    
T  52096569 ttaaatatgtctttagtccctgcattttcatcagattttggcattggtccatacactttattttgtttggaattggtccctacactttgtaaaaatattg 52096668  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||| | | |||||||||| ||         ||||||||| ||  ||||||| ||||| ||| ||||||||| ||||||||||| | |||||||    
T  52096669 gtattggtccttttgttaactttctgtt-aaaaaaaacacaaaact-tttagtattgg-tccctgcac-tttgtaaaattattggtattggt-ccctgca 52096763  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||| ||||| ||||||    
T  52096764 ctttgtaaaactattggtattgg 52096786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 44589405 - 44589282
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||| |||| ||||        ||||||||||||||| ||||||||||||||||||||    
T  44589405 ttaaatatgtctttagtccttgtacttccatcagattttagcattgatccctacacttttttttgtttggaattggtcc-tgcactttgtaaaaatattg 44589307  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||| ||||||||||||||    
T  44589306 gtattggtccttctattaactttct 44589282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 40147676 - 40147566
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||        |||||||||||||| |||||||||||||||||||||    
T  40147676 ttaaatatgtctttagaccttgcactttcatcagattttggcattggtccctgcac-tttttttgtttggaattggtctctgcactttgtaaaaatattg 40147578  T
Q  641 atattgatccct 652  Q
     ||||| |||||    
T  40147577 gtattggtccct 40147566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 536 - 646
Target Start/End: Complemental strand, 43562108 - 43561998
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||| ||||        ||||||||||||||||| |||||||||||||    
T  43562108 aaggtttaaatatgcctttagtccctgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtcccttcactttgtaaaaa 43562009  T
Q  636 tattgatattg 646  Q
    ||||| |||||    
T  43562008 tattggtattg 43561998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 51892660 - 51892790
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||    
T  51892660 aaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 51892759  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| || |||| ||||||||||    
T  51892760 atattggtattggtctctctgttaactttct 51892790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 710 - 808
Target Start/End: Complemental strand, 15169186 - 15169090
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||||||||    
T  15169186 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactctgttgg 15169090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 541 - 668
Target Start/End: Original strand, 16335059 - 16335186
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||| ||||||||||||||||||||||||    
T  16335059 ttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttcgtttggcattgatccctgcactttgtaaaaatattg 16335158  T
Q  641 atattgatccctctattaactttctatt 668  Q
     ||||| ||||||| |||||||| ||||    
T  16335159 gtattggtccctctgttaactttatatt 16335186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 23205702 - 23205825
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||  |||||||||||||||||||||||||||||    
T  23205702 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttt-gtttgacattggtccctgcactttgtaaaaatattg 23205800  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||| ||||||||||    
T  23205801 gtattgatccctctgttaactttct 23205825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 13198976 - 13199100
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||         ||||| ||||||||||||||||| |||||||||||    
T  13198976 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttatttggcattggtccctgcactttttaaaaatattg 13199075  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  13199076 gtattggtccctctgttaactttct 13199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 13199217 - 13199113
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  13199217 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 13199122  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  13199121 gttttgtgt 13199113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 40147592 - 40147488
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||||| | || |||||||||||| ||||||||||||||||||| |    
T  40147592 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgata-taggtgcca-cgtggcgtgaaatgattgggccacgtggcactctgtt-g 40147497  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  40147496 gttttgtgt 40147488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 40147354 - 40147477
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||||||||||    
T  40147354 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttt-gtttggaattggtccctgcactttgtaaaaatattg 40147452  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || || | ||||||||||    
T  40147453 gtattggtctctttgttaactttct 40147477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 42496339 - 42496212
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||| || |||||||||||||||||    
T  42496339 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgtactttgtaaaaatattg 42496240  T
Q  641 atattgatccctctattaactttctatt 668  Q
     ||||| ||||||| |||| ||||||||    
T  42496239 gtattggtccctctgttaaatttctatt 42496212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 46009032 - 46008910
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  46009032 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttt--gtttggtattggtccctgcactttgtaaaaatattg 46008935  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  46008934 gtattggttcctctgttaactttct 46008910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 561 - 663
Target Start/End: Complemental strand, 41965529 - 41965427
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||||||||||||||   ||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  41965529 tgcactttcatcagattttggcattggtccctgtacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaac 41965430  T
Q  661 ttt 663  Q
    |||    
T  41965429 ttt 41965427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 659
Target Start/End: Original strand, 45311199 - 45311317
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| || |||||||||| |||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  45311199 ttaaatgtgtcattggtccctgtactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 45311298  T
Q  641 atattgatccctctattaa 659  Q
     ||||||||||||| ||||    
T  45311299 gtattgatccctctgttaa 45311317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 47690290 - 47690419
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||| ||||| |||||||||||||  |||        |||||| ||||||||||||||||||||||||    
T  47690290 aaggtttaaatgtgtcattggtccctgcactttcattagattatggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 47690389  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| |||||||  |||||||||    
T  47690390 tattggtattggtccctctgctaactttct 47690419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 322061 - 321933
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||| | ||||||||||||||||||||||||    
T  322061 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttt-gtttcgcattggtccctgcactttgtaaaaa 321963  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    |||||  |||| ||||||| ||||||||||    
T  321962 tattggcattggtccctctgttaactttct 321933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 612 - 668
Target Start/End: Complemental strand, 11021646 - 11021590
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttctatt 668  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  11021646 attggtccctgcactttgtaaaaatattggtattggtccctctattaactttctatt 11021590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 29526252 - 29526376
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||  |  |||         ||||  ||||||| |||||||||||||||||||||    
T  29526252 ttaaatgtgtctttggtccttgcactttcatcagattttggcattggtttctgcacttttttttatttgacattggtctctgcactttgtaaaaatattg 29526351  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  29526352 gtattggtccctctgttaactttct 29526376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 35378069 - 35377945
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||| ||||||||||||||||||||||||||   ||        |||||| |||||||| ||||||||||||||||||||    
T  35378069 ttaaatgtgtcattggtccctgcaatttcatcagattttggcattggtccctgtacttttttttgtttggtattggtccatgcactttgtaaaaatattg 35377970  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  35377969 gtattggtccctctgttaactttct 35377945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 39210666 - 39210542
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||| |||||||||||||| || ||||        ||||||  |||||||||||||||||||||||||| |    
T  39210666 ttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtacctacacttttttttgtttggcgttggtccctgcactttgtaaaaatatcg 39210567  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  39210566 gtattggtccctctgttaactttct 39210542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 49263877 - 49264001
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||| |||||||||||||||||||  |||        |||||| |||| ||| ||||||||||||||||||||    
T  49263877 ttaaatgtgtcattggtccctgcactttcattagattttggcattggtccctgcacttttttttgtttggcattgatccttgcactttgtaaaaatattg 49263976  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  49263977 gtattggtccctctgttaactttct 49264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 607 - 789
Target Start/End: Original strand, 46008698 - 46008874
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctac 706  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |          | |||||||||| ||||||||  |||| |    
T  46008698 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgtaaaaaaaaaacccaaaactatt-ggtattgg-gccctgc 46008795  T
Q  707 acttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
    || ||||| ||||||||||||||  | ||||||| |||||||||||||||||||| ||||||||   | ||||||||||||||    
T  46008796 ac-tttgt-aaaatattggtatttgt-ccctgcaatttgtaaaaatattgatatt-ggtgccacgtgggcgtgaaatgattgg 46008874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 52936642 - 52936701
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  52936642 tgagcttaactcagttgatagaaacaatgtataatatatgtaaggtttgaggttcaaact 52936701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 665
Target Start/End: Complemental strand, 1922878 - 1922748
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || ||||||||| |||||||| ||||||||||||||  |  |||        |||||| |||||||| ||||||||||||||    
T  1922878 aaaggtttaaatgtgtcattggtccttgcattttcatcatattttggcattggtttctgcacttttttttgtttggcattggtccttgcactttgtaaaa 1922779  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    ||||||  |||| ||||||||||||||||||    
T  1922778 atattggcattggtccctctattaactttct 1922748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 654
Target Start/End: Original strand, 888070 - 888183
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||| |||||||||||||||||||||   |||        |||||| |||||||||||||||||||||||||||||    
T  888070 ttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 888169  T
Q  641 atattgatccctct 654  Q
     ||||| |||||||    
T  888170 gtattggtccctct 888183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 45311498 - 45311441
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttc 664  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  45311498 ttggtattggtccctgcactttgtaaaaatattggtattggtccctctattaactttc 45311441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 15169009 - 15169069
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  15169009 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 15169069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 44589093 - 44589153
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  44589093 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 44589153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 45848682 - 45848559
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||  ||||||||||||||||||||||||||||||  ||         |||||| |||||||||| ||||||||||||||||||    
T  45848682 ttaaatgtgtcattggtcccagcactttcatcagattttggcattggtccctgca-ttttttttgtttggtattggtccctacactttgtaaaaatattg 45848584  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  45848583 gtattggtccctctgttaactttct 45848559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 52096886 - 52096826
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  52096886 gtttggcattgatccctgcactttgtaaaaatattggtattgatccctctgttaactttct 52096826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 32328304 - 32328204
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||  || |||||||| ||| ||||||||||||||| ||| ||||||    
T  32328304 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgccacgctggcgtgaaataattgggccacgtggcactccgtt-ggtttt 32328208  T
Q  814 gtgt 817  Q
    ||||    
T  32328207 gtgt 32328204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 45311424 - 45311325
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  45311424 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 45311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 607 - 665
Target Start/End: Original strand, 40005484 - 40005542
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  40005484 ttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 40005542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 645
Target Start/End: Original strand, 45848387 - 45848492
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngttt-ggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||  || |||          ||| |||||||||||||||||||||||||||||||    
T  45848387 ttaaatatggttttagttcttgcactttcatcagattttggcattggctcctacattttttttttttttggaattggtccctgcactttgtaaaaatatt 45848486  T
Q  640 gatatt 645  Q
    ||||||    
T  45848487 gatatt 45848492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 919176 - 919304
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| |  |||        |||||  |||||||| || ||||||||||||    
T  919176 aaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtctctgcac-tttttttgtttgacattggtccttgtactttgtaaaaa 919274  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| || |||| ||||||||||    
T  919275 tattggtattggtctctcttttaactttct 919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 8444974 - 8444914
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  8444974 gtttggcattggtccctgcactttgtaaaaatattggtattggcccctctgttaactttct 8444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 556 - 668
Target Start/End: Original strand, 32328079 - 32328191
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| ||||||||||||||||||||||||||||| |  |||        |||||  |||||||| |||||||||||||||||||| ||||| |  ||||     
T  32328079 gtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttgacattggtccttgcactttgtaaaaatattggtattggtttctctg 32328178  T
Q  656 ttaactttctatt 668  Q
    |||||||||||||    
T  32328179 ttaactttctatt 32328191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 802
Target Start/End: Complemental strand, 51892901 - 51892816
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  51892901 aaaattattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 51892816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 661
Target Start/End: Complemental strand, 31317601 - 31317546
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaact 661  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  31317601 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaact 31317546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 591
Target Start/End: Original strand, 32384093 - 32384148
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  32384093 aaggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccc 32384148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 628
Target Start/End: Original strand, 15168909 - 15169003
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcacttt 628  Q
    |||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||    
T  15168909 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 15169003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 47704583 - 47704641
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||| ||| || ||||||||||||||||||||||||||||| ||||    
T  47704583 tgagcttaactcagttggtatgaataatgtataatatatgtaaggttcgaggtttaaac 47704641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 442 - 504
Target Start/End: Original strand, 48171878 - 48171940
Alignment:
Q  442 cttatgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||| ||||||| || | ||||||||||||||||| ||||||| ||||||||||    
T  48171878 cttatgagcttaactcagttggtagagacaatgtataatatatgcaaggttctaggttcaaac 48171940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 616 - 665
Target Start/End: Complemental strand, 18437122 - 18437073
Alignment:
Q  616 gtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  18437122 gtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 18437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 28692998 - 28693051
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||||| |||||||||||||||||| ||||| || |||||||||||||||    
T  28692998 attggtccctacactttgtaaaaatattggtattggtctctctattaactttct 28693051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 734 - 806
Target Start/End: Complemental strand, 45226260 - 45226189
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| || ||||||||||||||||    
T  45226260 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactctgtt 45226189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 659
Target Start/End: Complemental strand, 53940718 - 53940665
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaa 659  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  53940718 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaa 53940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 802
Target Start/End: Original strand, 1922638 - 1922723
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||| ||||    
T  1922638 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggtactc 1922723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 813
Target Start/End: Complemental strand, 23205936 - 23205841
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||  |||||| | || |||||||||||| ||||||||||||||| ||||| ||||    
T  23205936 aaaactattggtattggtcc--tgcactttgtaaaaatattgatatt-agtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttggttttt 23205841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 533 - 589
Target Start/End: Complemental strand, 44098826 - 44098770
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtc 589  Q
    ||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||    
T  44098826 ataaaggtttaaatatgtcattagtccctgcactttcaccatattttggcattggtc 44098770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 817
Target Start/End: Original strand, 45848465 - 45848546
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||||||||  |||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  45848465 ccctgcactttgtaaaaatattgatatt-agtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 45848546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 51716323 - 51716427
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |  | ||| ||||||||||||||||||||| ||||||| | || |||||||||||| |||||| |||||||| ||| |    
T  51716323 tttgtaaaaatattggtattggtgtc-tgccctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacatggcactccgtt-g 51716418  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  51716419 gttttgtgt 51716427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 1922645 - 1922684
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  1922645 ttggtattggtccctgcactttgtaaaaatattgatattg 1922684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 734 - 808
Target Start/End: Original strand, 8444820 - 8444893
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||||| |||||    
T  8444820 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccatgtggcactccgttgg 8444893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 533 - 628
Target Start/End: Complemental strand, 8445075 - 8444980
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcacttt 628  Q
    ||||||| |||||| |||| || |||| |||||||| ||||||||||||||||||||||  |||        |||||| |||||||||||||||||    
T  8445075 ataaaggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 8444980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 13199205 - 13199166
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  13199205 ttggtattggtccctgcactttgtaaaaatattgatattg 13199166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 15169174 - 15169135
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  15169174 ttggtattggtccctgcactttgtaaaaatattgatattg 15169135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 32328297 - 32328258
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32328297 ttggtattggtccctgcactttgtaaaaatattgatattg 32328258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 43980185 - 43980130
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||||| ||||    
T  43980185 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctacac 43980130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 45311417 - 45311378
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  45311417 ttggtattggtccctgcactttgtaaaaatattgatattg 45311378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 51716498 - 51716439
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||||||||| |||||||||||||||||| ||||  ||||||| ||||||||||    
T  51716498 tttggcattggtccctacactttgtaaaaatattggtattagtccctctgttaactttct 51716439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 51892894 - 51892855
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  51892894 ttggtattggtccctgcactttgtaaaaatattgatattg 51892855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 43561874 - 43561932
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    |||||| ||||||||||||| ||||||||||||||| ||||| ||||| | ||||||||    
T  43561874 gtttggcattggtccctgcattttgtaaaaatattggtattggtccctatgttaacttt 43561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 44589253 - 44589219
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  44589253 attggtccctgcactttgtaaaaatattgatattg 44589219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 662
Target Start/End: Original strand, 45226117 - 45226167
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactt 662  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| |||||||    
T  45226117 attgatccctgcactttgtaaaaatattggtattggtccctctgttaactt 45226167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 50668345 - 50668399
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||| ||| ||||||  ||||||||||||||||||| |||||||||    
T  50668345 cttaattcagttggtatgaacaatacataatatatgtaaggttcggggttcaaac 50668399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 512
Target Start/End: Complemental strand, 685049 - 684988
Alignment:
Q  451 ttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcgatca 512  Q
    |||||||||||| ||| ||||||| ||| ||||||||||| | ||||||||||| |||||||    
T  685049 ttaattcagttggtatgaacaatgcatattatatgtaaggcttgaggttcaaacctcgatca 684988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 1614277 - 1614224
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||| |||||||||||||||||||| ||||| || |||| ||||||||||    
T  1614277 attggtccttgcactttgtaaaaatattggtattggtctctctgttaactttct 1614224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 634
Target Start/End: Complemental strand, 5340231 - 5340130
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||||||| |||||||| |||||||||  |  |||||||||||||||||  |||        |||||| ||||||||||||||||| |||    
T  5340231 ataaaggcttaaatatgtgtttagtccctgcactttcgcctaattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttctaa 5340132  T
Q  633 aa 634  Q
    ||    
T  5340131 aa 5340130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 13199236 - 13199191
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  13199236 ttggtattggtccctgcactttgtaaaaatattggtattggtccct 13199191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 15169205 - 15169160
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  15169205 ttggtattggtccctgcactttgtaaaaatattggtattggtccct 15169160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 644
Target Start/End: Complemental strand, 40147580 - 40147543
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatat 644  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40147580 ttggtattggtccctgcactttgtaaaaatattgatat 40147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 802
Target Start/End: Complemental strand, 43562026 - 43561959
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| |||||||||||||||||| |||| ||||||| |||| |||||||||||| |||||||||||||||    
T  43562026 cccttcactttgtaaaaatattggtatt-ggtgcca-catgacgtgaaatgattgggccacgtggcactc 43561959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 646
Target Start/End: Complemental strand, 45226265 - 45226232
Alignment:
Q  613 ttggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||||||||||||||||||||||||||||||||    
T  45226265 ttggtccctgcactttgtaaaaatattgatattg 45226232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 590
Target Start/End: Original strand, 49148170 - 49148219
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcc 590  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||||||||    
T  49148170 ttaaatatgtcattagtccctgcactttcaccatattttggcattggtcc 49148219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 50380896 - 50380851
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  50380896 tgagcttaattcagttggtatgaacaatgcataatatatgtaaggt 50380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 507
Target Start/End: Original strand, 51465338 - 51465399
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    ||||||||||||||||| |||  |||||| ||||||||||||||| ||| ||||| ||||||    
T  51465338 tgagcttaattcagttggtatggacaatgcataatatatgtaagggtcggggttcgaacttc 51465399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 53530010 - 53530063
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggtt 499  Q
    ||||||||| |||||| ||| |||||||| |||||||||||||||| |||||||    
T  53530010 tgagcttaactcagttaataaaaacaatgcataatatatgtaaggtccgaggtt 53530063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 56096207 - 56096264
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||| ||||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  56096207 agcttaactcagttgataaggacaatgcataatatatgtaaggttcgtggttcaaact 56096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 541 - 589
Target Start/End: Original strand, 10616465 - 10616513
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtc 589  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||    
T  10616465 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtc 10616513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 448 - 500
Target Start/End: Complemental strand, 34960215 - 34960163
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttc 500  Q
    ||||||| ||||||| ||||||||||| ||||||||| |||| ||||||||||    
T  34960215 agcttaactcagttggtataaacaatgcataatatatataagattcgaggttc 34960163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 456 - 512
Target Start/End: Complemental strand, 46434810 - 46434754
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcgatca 512  Q
    ||||||||||   |||||| ||||||||||||||||| |||||||||||| ||||||    
T  46434810 tcagttgataaggacaatgcataatatatgtaaggtttgaggttcaaactccgatca 46434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 8415556 - 8415497
Alignment:
Q  445 atgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||||||||||||| |||  |||||| |||||||||||||| | | ||||||||||    
T  8415556 atgagcttaattcagttggtatggacaatgcataatatatgtaagatccaaggttcaaac 8415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 8444809 - 8444848
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  8444809 ttggtattagtccctgcactttgtaaaaatattgatattg 8444848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 579
Target Start/End: Complemental strand, 10616615 - 10616572
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagatttt 579  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||    
T  10616615 aaggcttaaatatgtctttagtccctgcactttcattagatttt 10616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 27871424 - 27871377
Alignment:
Q  460 ttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    |||||| | ||||||||||||||||| ||||| |||||||||||||||    
T  27871424 ttgatagagacaatgtataatatatgcaaggtccgaggttcaaacttc 27871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 591
Target Start/End: Complemental strand, 31317642 - 31317587
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| |||||| |||| || |||  |||||||||||||||||||||||||||||||    
T  31317642 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccc 31317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 492
Target Start/End: Complemental strand, 34942472 - 34942425
Alignment:
Q  445 atgagcttaattcagttgatataaacaatgtataatatatgtaaggtt 492  Q
    ||||||||| |||||||| || | ||||||||||||||||||||||||    
T  34942472 atgagcttagttcagttggtagagacaatgtataatatatgtaaggtt 34942425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 789
Target Start/End: Complemental strand, 44589247 - 44589194
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
    |||||||||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  44589247 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgg 44589194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 45226018 - 45226065
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggt 588  Q
    ||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  45226018 ttaaatatgcctttagtcactccactttcatcagattttggcattggt 45226065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 12398753 - 12398703
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||| ||||    
T  12398753 ttaaatatgtctttagtccttgcactttcaccaatttttggtattgatccc 12398703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 35050598 - 35050544
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||| |||  ||||| |||||||||||||||||| || ||||||||    
T  35050598 cttaattcagttggtatgtacaatttataatatatgtaaggtttgaagttcaaac 35050544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 488
Target Start/End: Complemental strand, 37970230 - 37970192
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaa 488  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  37970230 cttaattcagttggtataaaaaatgtataatatatgtaa 37970192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 447 - 505
Target Start/End: Original strand, 39146644 - 39146702
Alignment:
Q  447 gagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||| |||||||||||  |||||| |||||||| ||||||||||  |||||||||    
T  39146644 gagcttaactcagttgatatggacaatgcataatataagtaaggttcggagttcaaact 39146702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 39489607 - 39489665
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||||||||||  ||||||  ||| |||||| |||||||| |||||||||    
T  39489607 tgagcttaattcagttgataggaacaatacatagtatatgcaaggttcggggttcaaac 39489665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 496
Target Start/End: Original strand, 40160799 - 40160849
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgag 496  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||| ||||    
T  40160799 tgagcttaattcagttggtatagacaacgcataatatatgtaaggtccgag 40160849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 53940754 - 53940704
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||| ||||||||||||||||||||||    
T  53940754 ttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccc 53940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #133
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 6459984 - 6459939
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||| |||||||||||  |||||| ||||||||||||||||    
T  6459984 tgagcttaactcagttgatatggacaatgcataatatatgtaaggt 6459939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #134
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 22411775 - 22411824
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||| |||  |||||| ||||||||||||||||||| ||||||||||    
T  22411775 tcagttggtatggacaatgcataatatatgtaaggttcggggttcaaact 22411824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #135
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 32923290 - 32923245
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  32923290 tgagcttaactcagttggtatgaacaatgcataatatatgtaaggt 32923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #136
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 487
Target Start/End: Original strand, 40614404 - 40614441
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgta 487  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  40614404 cttaattcagttgttatgaacaatgtataatatatgta 40614441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #137
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 41520957 - 41521014
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||| ||||||| || | |||||| |||||||||| ||||||| |||||||||||    
T  41520957 agcttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaact 41521014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #138
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 42344656 - 42344615
Alignment:
Q  468 aacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    |||||||||||||||||| ||||| |||||||||||| ||||    
T  42344656 aacaatgtataatatatgcaaggtccgaggttcaaacatcga 42344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #139
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 596
Target Start/End: Complemental strand, 51716540 - 51716479
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    ||||| |||||| |||  || |||| ||||||||||| ||||||||||||||||||| ||||    
T  51716540 aaaggtttaaatgtgttattggtccctgcactttcattagattttggcattggtccctacac 51716479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #140
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 505
Target Start/End: Original strand, 54677240 - 54677285
Alignment:
Q  460 ttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||  |||||| ||||||||||||||||||||| ||||||||    
T  54677240 ttgatatggacaatgcataatatatgtaaggttcgagattcaaact 54677285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 1e-59; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 535 - 817
Target Start/End: Complemental strand, 9566460 - 9566183
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||        |||||||||| |||| ||||||||||||||    
T  9566460 aaaggtttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaatttgtccatgcactttgtaaaa 9566361  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    ||||||||||||||||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| ||    
T  9566360 atattgatattgatccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtc 9566264  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    || ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  9566263 cc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 9566183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 33360865 - 33360590
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||        ||||||||||||||||| |||||||||||||    
T  33360865 aaggtttaaatatgtctttagtcgttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaa 33360766  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||||||||||| |||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| ||||    
T  33360765 tattggtattgatccctctgttaactttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc 33360669  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgggttttgtgt 817  Q
     |||||||||||||||||||| |||||| | ||||  || |||||||||||||| ||||||||||||| ||| ||||||||||    
T  33360668 -tgcactttgtaaaaatattggtattgg-tcccact-tggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 33360590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 534 - 802
Target Start/End: Complemental strand, 6390330 - 6390067
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||    
T  6390330 taaaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaa 6390231  T
Q  634 aatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    ||||||| ||||||||||| | ||||| |||| ||         |||||||||||| |||||||| ||||| ||| |||||||||| |||||||||| |     
T  6390230 aatattggtattgatccctttgttaaccttctgttaaaaaacaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaaaattggtattggt- 6390135  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||||||| | ||||||| | || |||||||||||| |||||||||||||||    
T  6390134 ccctgcactttgtaaaaatattgata-tcggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 6390067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 534 - 817
Target Start/End: Original strand, 16408734 - 16409014
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||||||  ||||||| |||||||||||||| ||||||||||||||||| ||||        |||||||||||||||||||||||||||||    
T  16408734 taaaggtttaaatatgcatttagtctttgcactttcatcatattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaa 16408833  T
Q  634 aatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    ||||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| |||  |||||||||||||||||||| |     
T  16408834 aatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-cttgtaaaaatattggtattggt- 16408929  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt----ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| | ||||| | || ||||||||||||    ||||||||||||||| ||| ||||||||||    
T  16408930 ccctgcactttgtaaaaatattgatatt-gctgcca-cgtggcgtgaaatgattggggggccacgtggcactccgtt-ggttttgtgt 16409014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 33243581 - 33243318
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||    
T  33243581 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttttttggaattggtccctgcactttgtaaaaatattg 33243482  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| |           |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |||    
T  33243481 gtattggtccctctattaactttctgtaaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 33243386  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||| ||||||| | || || ||||||||| ||||||||||||||| |||||    
T  33243385 actttgtaaaaatattgatatt-ggtgcca-cgtggcgagaaatgattgggccacgtggcactccgttgg 33243318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 32218845 - 32219110
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  32218845 ttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttcttttgtttggaattggtccctgcactttgtaaaaatatt 32218944  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
    | || || |||||||||||||||||| ||           |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |    
T  32218945 ggtactggtccctctattaactttctgttaaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-t 32219040  T
Q  738 gcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||| |||||||| |||||    
T  32219041 gcactttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggccacatggcactccgttgg 32219110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 5997603 - 5997346
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  5997603 ttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 5997504  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    | ||||||||||| | ||||| |||| ||         |||||||||||||| ||||||| |||| |||||| ||||||||||||| |||| |||| |||    
T  5997503 ggtattgatccctttgttaaccttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggcattggtccc-tgc 5997408  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||| ||||| ||||||| | || |||||||||||| |||||||||||||||    
T  5997407 actttgtaaaaatatttatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 5997346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 10143628 - 10143350
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||  |||||||||| |||||||||||||||||| |||||||||| ||||        |||||||||||||||||||||||||||||||    
T  10143628 aaggtttaaatatgcttttagtccttacactttcatcagattttgtcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 10143529  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnn---cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    ||||| ||||| ||||||| |||||||||| ||            |||||||||||||| ||||||| ||||||||||| ||||||||||| |||||| |    
T  10143528 tattggtattggtccctctgttaactttctgttaaaaaaaaaaaacacaaaactattgg-tattggt-ccctacacttt-gtaaaaatattagtattggt 10143432  T
Q  733 cccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
     || ||||||||||||||||||| ||||| ||||||| |||| |||||||||||| ||||||||||||||| ||| ||||||||||    
T  10143431 acc-tgcactttgtaaaaatatttatatt-ggtgcca-catggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 10143350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 12396074 - 12395817
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||         |||||  ||||||||||||||||||||||||||||    
T  12396074 ttaaatatgtctttagtccttgcactttaatcagattttggcattggtccctacactttttttttgtttgacattggtccctgcactttgtaaaaatatt 12395975  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    | ||||| ||||||| |||||||||| ||         |||||||||||| |||||| | ||||| ||| ||||||||||||||||||||| | |||| |    
T  12395974 ggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-ggtatt-gatccctgcac-tttgtaaaaatattggtattggt-ccctac 12395879  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  12395878 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 12395817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 541 - 802
Target Start/End: Original strand, 21002771 - 21003027
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||| ||||||||||||||||||||    
T  21002771 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacatttttttgtttggaattgatccatgcactttgtaaaaatattg 21002870  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||  ||          |||||||||||| |||||||||  ||| ||| |||| |||||||||||||||| | | ||||    
T  21002871 gtattggtccctctattaactttcagttaaaaaaaaaacacaaaactatt-ggtattggt--cctgcac-tttgaaaaaatattggtattggt-ctctgc 21002965  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| |||||    
T  21002966 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgacactc 21003027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 583663 - 583936
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaaaatat 638  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||          ||||||||||||||||||||||||||||||||||    
T  583663 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctgcacttttttttttgtttggaattggtccctgcactttgtaaaaatat 583762  T
Q  639 tgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
    || ||||| |||||||||||||||| | ||           ||| ||||||| |||||||| ||||| ||| ||||||||||||||||||||| | ||||    
T  583763 tggtattggtccctctattaactttatgttaaaaaaaaaaaacacaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccct 583858  T
Q  738 gcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgat-tggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||||  |||||| | || |||||||||||  ||||||||||||||| ||| ||||||||||    
T  583859 gcactttgtaaaaatattgatatt-agtgcca-cgtggcgtgaaatgatcgggccacgtggcactccgtt-ggttttgtgt 583936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 33705804 - 33706023
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  33705804 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaatattg 33705903  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| ||||||| ||| ||| || ||          || |||||||||||   || | ||||| ||| ||||||||||||||||||||| | ||||||    
T  33705904 gtattggtccctctgttagcttcctgttaaaaaaaaaacataaaactattgg--tttaggtccctgcac-tttgtaaaaatattggtattggt-ccctgc 33705999  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||    
T  33706000 actttgtaaaaatattgatattgg 33706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 536 - 762
Target Start/End: Complemental strand, 22696001 - 22695778
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||| | ||||        |||||||||||||||||||||||||||||||    
T  22696001 aaggtttaaatatgcctttagtccttgcactttcattagattttggcattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaaa 22695902  T
Q  636 tattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    ||||  ||||| |||||||||||||||||| ||          |||||||||| | |||||||| ||||| ||| ||||||||| ||||||||||| | |    
T  22695901 tatttgtattggtccctctattaactttctgttaaaaaaaaaacacaaaacta-taggtattgg-tccctgcac-tttgtaaaattattggtattggt-c 22695806  T
Q  735 cctgcactttgtaaaaatattgatattg 762  Q
    |||||||||||||||||||||| |||||    
T  22695805 cctgcactttgtaaaaatattggtattg 22695778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 536 - 730
Target Start/End: Complemental strand, 605857 - 605664
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaa 633  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||          |||||||||||||||||||||||||||||    
T  605857 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttttgtttggaattggtccctgcactttgtaaa 605758  T
Q  634 aatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
    ||||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  605757 aatattggtattggtccctctattaactttctgtttaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 605664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 5146815 - 5146944
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||        ||||||||||| |||| |||||||||||||    
T  5146815 aaaggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccctacacttttttttgtttggaattgatccc-gcactttgtaaaa 5146913  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||||||||||||||    
T  5146914 atattggtattggtccctctattaactttct 5146944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 561 - 802
Target Start/End: Complemental strand, 2793422 - 2793188
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||  |||||||||| ||||        ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2793422 tgcactttcatcagattttaacattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaatattggtattgatccctctattaac 2793323  T
Q  661 tttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatat 760  Q
     |||| ||          | ||||||||| ||||||||| |  |||   ||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  2793322 cttctgttaaaaaaaaa-ataaaactatt-ggtattggtcctgtac---tttgtaaaaatattggtattggt-ccctgcactttgtaaaaatattgatat 2793229  T
Q  761 tgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    | | ||||| | || |||||||||||| |||||||||||||||    
T  2793228 t-gatgcca-cgtggcgtgaaatgattgggccacgtggcactc 2793188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 21904868 - 21904992
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||         |||||||||||||| |||||||||||||||||||||    
T  21904868 ttaaatatgtctttagtccttgcactttcatcagattttggtattagtccctacaattttttttgtttggaattggtctctgcactttgtaaaaatattg 21904967  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| |||||||||||| |||||    
T  21904968 gtattggtccctctattaattttct 21904992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 6535410 - 6535536
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgaca--cnnnnnnnngtttggaattggtccctgcactttgtaaaaatat 638  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||           |||||||||||||||||||| |||||||||||||    
T  6535410 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacatttttttttttgtttggaattggtccctgcaatttgtaaaaatat 6535509  T
Q  639 tgatattgatccctctattaactttct 665  Q
    || ||||| ||||||| ||||||||||    
T  6535510 tggtattggtccctctgttaactttct 6535536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 535 - 665
Target Start/End: Complemental strand, 17204278 - 17204148
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||| ||||| ||||| ||||        ||||||||||||||||| ||||||||||||    
T  17204278 aaaggcttaaatatatctttagtccctgcactttcatcagattttagcattcgtccctacactttattttgtttggaattggtccctacactttgtaaaa 17204179  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||| ||||||||||    
T  17204178 atattggtattggtccctctgttaactttct 17204148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 541 - 652
Target Start/End: Original strand, 14630816 - 14630928
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  14630816 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 14630915  T
Q  640 gatattgatccct 652  Q
    | ||||| |||||    
T  14630916 ggtattggtccct 14630928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 607 - 763
Target Start/End: Original strand, 21905096 - 21905249
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttcccta 705  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||          |||||||||||||| ||||||| ||||     
T  21905096 ttggtattggtccctgcactttgtaaaaatattggtattggtccctctattaattttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctg 21905193  T
Q  706 cacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  21905194 cacttt-gtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatattgg 21905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 536 - 646
Target Start/End: Original strand, 33877787 - 33877897
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||        ||||||||||||||  |||||||||||||||    
T  33877787 aaggtttaaatatgcctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttggaattggtcagtgcactttgtaaaaa 33877886  T
Q  636 tattgatattg 646  Q
    |||||||||||    
T  33877887 tattgatattg 33877897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 605480 - 605604
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||||  |||        |||||| |||||||||||||||||||| ||||||||    
T  605480 ttaaatgtgtcattggtccttgcacttccatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtataaatattg 605579  T
Q  641 atattgatccctctattaactttct 665  Q
    |||||| ||||||| ||||||||||    
T  605580 atattggtccctctgttaactttct 605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 9565999 - 9566123
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  9565999 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 9566098  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  9566099 gtattggtccctctgttaactttct 9566123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 21905469 - 21905345
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  21905469 ttaaatgtgtcattggtccctgcactttcatcagattttgccattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 21905370  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||| ||||||||||    
T  21905369 gtattgatccctctgttaactttct 21905345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 22695798 - 22695694
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  22695798 tttgtaaaaatattggtattgatccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactcggtt-g 22695703  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  22695702 gttttgtgt 22695694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 33243172 - 33243296
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||| ||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  33243172 ttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 33243271  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  33243272 gtattggtccctctgttaactttct 33243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 33360450 - 33360574
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  33360450 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaatattg 33360549  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  33360550 gtattggtacctctgttaactttct 33360574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 14630902 - 14631005
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattggccacgtggcactctgttggg 809  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||| |||||||||||| ||| ||    
T  14630902 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattggtcacgtggcactccgtt-gg 14630997  T
Q  810 ttttgtgt 817  Q
    ||||||||    
T  14630998 ttttgtgt 14631005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 543 - 665
Target Start/End: Complemental strand, 32219254 - 32219131
Alignment:
Q  543 aaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgat 642  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| |    
T  32219254 aaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaatattggt 32219155  T
Q  643 attgat-ccctctattaactttct 665  Q
    |||| | |||||| ||||||||||    
T  32219154 attggtcccctctgttaactttct 32219131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 17203868 - 17203992
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  17203868 ttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 17203967  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| |||| |||||    
T  17203968 gtattggtccctctgttaattttct 17203992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 6389910 - 6390039
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||||||||||  |||||||||  |||        |||||| ||||||||||||||||||||||||    
T  6389910 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 6390009  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| |||||||  |||||||||    
T  6390010 tattggtattggtccctctgctaactttct 6390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 10143208 - 10143337
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| | || || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||    
T  10143208 aaaggtttaaatgtctcattggtccctgcactttcatcagattttggcattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaaa 10143306  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| | ||||| ||||||||||    
T  10143307 atattggtattggttcctctgttaactttct 10143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 2793037 - 2793161
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||| |||||||||||||||||  |||        |||||| |||||||| ||||||||||||||||||||    
T  2793037 ttaaatgtgtcattggtccctgcactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaatattg 2793136  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| |||||||  |||||||||    
T  2793137 gtattggtccctctgctaactttct 2793161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 561 - 665
Target Start/End: Complemental strand, 16409131 - 16409027
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||| ||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| | ||||| |||||    
T  16409131 tgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggttcctctgttaac 16409032  T
Q  661 tttct 665  Q
    |||||    
T  16409031 tttct 16409027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 21905228 - 21905332
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  21905228 tttgtaaaaatattgatattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 21905323  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  21905324 gttttgtgt 21905332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 22695558 - 22695682
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| |||||||| ||||||||||||||||||||    
T  22695558 ttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaatattg 22695657  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  22695658 gtattggttcctctgttaactttct 22695682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 646
Target Start/End: Complemental strand, 3199602 - 3199500
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||| |||          ||| ||||||||||||||||||||| |||||||||    
T  3199602 ttaaatatgtctttagtccttacacttttatcagattttggcattggtccctaca---tttttttttttgaattggtccctgcactttgtgaaaatattg 3199506  T
Q  641 atattg 646  Q
     |||||    
T  3199505 gtattg 3199500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 6535790 - 6535665
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  ||          |||||| ||||||||||||||||||||||||||||    
T  6535790 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcattttttttttgtttggcattggtccctgcactttgtaaaaatatt 6535691  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||| | ||||||||||    
T  6535690 ggtattggtccctttgttaactttct 6535665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 33706216 - 33706087
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||||||||||||||| ||| |  |||        |||||| |||||||||| |||||||||||||    
T  33706216 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtctctgcacttttttttgtttggcattggtccctacactttgtaaaaa 33706117  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||| ||||||    
T  33706116 tattggtattggtccctctgttagctttct 33706087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 5997196 - 5997320
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||| |||||||||||||||||   ||        |||||| |||||||||||||||||||||||||||||    
T  5997196 ttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgtacttttttttgtttggcattggtccctgcactttgtaaaaatattg 5997295  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||  |||||||  |||||||||    
T  5997296 gtattagtccctctgctaactttct 5997320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 16120404 - 16120528
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||| || |||||||||||   |||        |||||| |||||||||||||||||||||||||||||    
T  16120404 ttaaatgtgtcattggtccctgcactttcatcagacttcggcattggtccttgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 16120503  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || |||| ||||||||||    
T  16120504 gtattggtctctctgttaactttct 16120528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 33878025 - 33877965
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  33878025 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 33877965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 813
Target Start/End: Complemental strand, 605710 - 605614
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||||| ||||    
T  605710 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttggttttt 605614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 14444947 - 14444888
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  14444947 tttggtattggtccctacactttgtaaaaatattggtattggtccctctattaactttct 14444888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 561 - 665
Target Start/End: Complemental strand, 584054 - 583950
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    ||||||||||| ||||||||||||| |||||  |||        |||||| ||| ||||||||||||||||||||||||  ||||| ||||||| |||||    
T  584054 tgcactttcattagattttggcattcgtcccagcacttttttttgtttggcattagtccctgcactttgtaaaaatattagtattggtccctctgttaac 583955  T
Q  661 tttct 665  Q
    |||||    
T  583954 tttct 583950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 12395666 - 12395790
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||| |||||||||||||||||||||   |||         ||||  |||| ||||||||||||||||||||||||    
T  12395666 ttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcacttttttttatttgacattgatccctgcactttgtaaaaatattg 12395765  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  12395766 gtattggtccctctgttaactttct 12395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 6535553 - 6535652
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | ||  ||||||||||| ||||||||||||||| ||| ||||||    
T  6535553 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggtgtgaaatgattgggccacgtggcactccgtt-ggtttt 6535648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 14631140 - 14631017
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||| || |  |||        |||||| |||| || |||||||||||||||||||||    
T  14631140 ttaaatgtgtcattggtccctgcactttcatcagattttggcattgatctctgcacttttttt-gtttggcattgatctctgcactttgtaaaaatattg 14631042  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  14631041 gtattggtccctctgttaactttct 14631017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 596
Target Start/End: Original strand, 3199303 - 3199365
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    |||||| |||||| |||| || |||| ||||||||||||||||||||||||||||||| ||||    
T  3199303 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctacac 3199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 616 - 665
Target Start/End: Original strand, 21905023 - 21905072
Alignment:
Q  616 gtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  21905023 gtccttgcactttgtaaaaatattggtattggtccctctattaactttct 21905072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 652
Target Start/End: Original strand, 21905209 - 21905254
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  21905209 ttggtattggtccctgcactttgtaaaaatattgatattggtccct 21905254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 22695817 - 22695772
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  22695817 ttggtattggtccctgcactttgtaaaaatattggtattgatccct 22695772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 3199520 - 3199416
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||| ||||||||||||||| | |  ||||||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||| |    
T  3199520 tttgtgaaaatattggtattggttcg-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggacacgtggcactccgtt-g 3199425  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  3199424 gttttgtgt 3199416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 3199346 - 3199405
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||||||||| |||||||||||||||||| ||||  ||||||| ||||||||||    
T  3199346 tttggcattggtccctacactttgtaaaaatattggtattagtccctctgttaactttct 3199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 6535560 - 6535599
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6535560 ttggtattggtccctgcactttgtaaaaatattgatattg 6535599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 14630914 - 14630953
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14630914 ttggtattggtccctgcactttgtaaaaatattgatattg 14630953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 505
Target Start/End: Complemental strand, 23635774 - 23635715
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||  |||||||||||| |||||| |||||||||||||||||||  |||||||||    
T  23635774 tgagcttatctcagttgatatatacaatgcataatatatgtaaggttcggagttcaaact 23635715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 505
Target Start/End: Original strand, 2105927 - 2105965
Alignment:
Q  467 aaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  2105927 aaacaatgcataatatatgtaaggttcgaggttcaaact 2105965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 21905245 - 21905279
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  21905245 attggtccctgcactttgtaaaaatattgatattg 21905279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 630
Target Start/End: Original strand, 1827079 - 1827148
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgt 630  Q
    |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||    
T  1827079 tgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgt 1827148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 665
Target Start/End: Complemental strand, 2182244 - 2182195
Alignment:
Q  616 gtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||||||||||||||||||||| |||| ||||| | ||||||||||    
T  2182244 gtccctgcactttgtaaaaatattgacattggtccctttgttaactttct 2182195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 505
Target Start/End: Original strand, 4826314 - 4826350
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4826314 acaatgcataatatatgtaaggttcgaggttcaaact 4826350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 24623367 - 24623319
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||||||  |||||| ||||||||||||||||||| |||||||||    
T  24623367 tcagttgatatggacaatgcataatatatgtaaggttcggggttcaaac 24623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 1989102 - 1989040
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||| ||||||| ||| | ||||| ||||||||||||||||| ||||||||||| ||||    
T  1989102 tgagcttaactcagttggtatga-caatgcataatatatgtaaggtttgaggttcaaacctcga 1989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Complemental strand, 12904377 - 12904318
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||  ||||||||||| ||||||| |||||||||| ||||||||  |||||||||    
T  12904377 tgagcttacctcagttgatatgaacaatgcataatatatgcaaggttcggagttcaaact 12904318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Complemental strand, 16120621 - 16120574
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggt 588  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||    
T  16120621 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 16120574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 22695786 - 22695747
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  22695786 ttggtattgatccctgcactttgtaaaaatattgatattg 22695747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 1804098 - 1804148
Alignment:
Q  445 atgagcttaattcagttgatataaacaatgtataatatatgtaaggttcga 495  Q
    |||| ||||| |||||||||||| ||| |||||||||||||||||| ||||    
T  1804098 atgaacttaactcagttgatatacacattgtataatatatgtaaggatcga 1804148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 13496117 - 13496175
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||||||| ||||||| |||||||||| ||||| ||  ||||||||    
T  13496117 tgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaac 13496175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 25934810 - 25934868
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||  ||||||||| | ||||||| |||||||||||||| |||| |||||||||    
T  25934810 tgagcttagatcagttgatttgaacaatgaataatatatgtaagattcggggttcaaac 25934868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 26548252 - 26548310
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||| ||  ||| |||||||||||||||||| |||||||| |||||||||    
T  26548252 tgagcttaactcaattagtatgaacaatgtataatatatgcaaggttcggggttcaaac 26548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 451 - 489
Target Start/End: Complemental strand, 26611095 - 26611057
Alignment:
Q  451 ttaattcagttgatataaacaatgtataatatatgtaag 489  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  26611095 ttaattcagttgatatgaacaatgcataatatatgtaag 26611057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 6470676 - 6470623
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggtt 499  Q
    ||||||||| |||||||||| | |||||| |||||||||||||| |||| ||||    
T  6470676 tgagcttaactcagttgataaagacaatgcataatatatgtaagtttcggggtt 6470623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 24212599 - 24212538
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    ||||||||| |||||||||||  |||||| ||||||||||||| ||  | ||||||||||||    
T  24212599 tgagcttaactcagttgatatggacaatgcataatatatgtaatgtatggggttcaaacttc 24212538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 499
Target Start/End: Complemental strand, 28046238 - 28046185
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggtt 499  Q
    |||||||| ||||||||||| | |||||| |||||||||| |||||| ||||||    
T  28046238 tgagcttagttcagttgataaagacaatgcataatatatgcaaggtttgaggtt 28046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 2e-58; HSPs: 129)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 28486623 - 28486894
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  28486623 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 28486722  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | ||||||    
T  28486723 gtattggtccctctattaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgc 28486818  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||||  |||||||||||| ||| ||||||||||    
T  28486819 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattggaacacgtggcactccgtt-ggttttgtgt 28486894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 536 - 808
Target Start/End: Complemental strand, 23253741 - 23253474
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||||||    
T  23253741 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaaaa 23253642  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| |||||||||||||||||||||         ||||||| |||| |||||||| ||||| ||| ||||||||||||||||||||| | ||    
T  23253641 tattggtattggtccctctattaactttctattaaaaaaaaacacaaaattatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-cc 23253546  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||| |||||||| |||||    
T  23253545 ctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacatggcactccgttgg 23253474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 1342843 - 1342586
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  1342843 ttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 1342744  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |||    
T  1342743 gtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 1342648  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  1342647 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 1342586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 541 - 802
Target Start/End: Original strand, 1366305 - 1366561
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  1366305 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 1366404  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    | ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| ||||||||||||||||||  |||||||    
T  1366405 ggtattggtccctctattaactttctgttaaaaaaaa-cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattgg-cccctgc 1366499  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  1366500 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 1366561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 38872513 - 38872784
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  38872513 ttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 38872612  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||||||||| ||||| || ||||| ||| ||||||||||||||||||||| | ||||||    
T  38872613 gtattggtccctctattaactttctgttaaaaaaaaaacacaaaactatt-ggtatcgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgc 38872708  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| |||| || | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  38872709 actttgtaaaaatattgatatt-ggtgtca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 38872784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 28838104 - 28838367
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||| ||||||||||||||||||||||    
T  28838104 ttaaatatctctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggttcctgcactttgtaaaaatattg 28838203  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| ||||||| |||||||||| ||          ||||||||| |||| ||||||| |||| |||||| |||||||||||||||||| |||| |||    
T  28838204 gtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactgttgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 28838299  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||||||||    
T  28838300 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactctgttgg 28838367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 541 - 801
Target Start/End: Complemental strand, 47648267 - 47648011
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||| |||||||||||||||||    
T  47648267 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgtactttgtaaaaatattg 47648168  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||| ||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |||    
T  47648167 gtattggtccctctattaactttctgttaaaaaaaaaacacaaagctattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 47648072  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcact 801  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||    
T  47648071 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcact 47648011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 50756070 - 50755799
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||    
T  50756070 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaaaatattg 50755971  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||  ||||||| |||||||||| ||          |||||||||||||| ||| ||| |||| |||||| |||||||||||||||||| |||| |||    
T  50755970 gtattagtccctctgttaactttctgttaaaaaaaaaacacaaaactattgg-tatcggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 50755875  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  50755874 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 50755799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 44519749 - 44519481
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||         |||| ||||||||||||||||||||||||||||||    
T  44519749 ttaaatatgtctttaatccttgcactttcatcagattttggtattggtccctacactttttttt-tttgtaattggtccctgcactttgtaaaaatattg 44519651  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  44519650 gtattggtccctctattaactttctgttaaaaaaaa-cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgca 44519556  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||||| ||| ||||||||||    
T  44519555 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccatgtggcactccgtt-ggttttgtgt 44519481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 38717329 - 38717601
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  38717329 ttaaatatgcctttagtccttgtactttcatcagattttagcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 38717428  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| | |||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||    
T  38717429 ggtattggttcctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tg 38717524  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  38717525 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 38717601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 45951315 - 45951045
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||| || ||||        ||||||||||||||||||||||||||||||||||||    
T  45951315 ttaaatacgcctttagtctttgcactttcatcagattttggcattggttcctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 45951216  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||| |  ||||| |    
T  45951215 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatatt-agtccctgta 45951120  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||| ||||||||||    
T  45951119 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactccgtt-ggttttgtgt 45951045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 5132429 - 5132553
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  5132429 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 5132528  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||||||||||||||    
T  5132529 gtattgatccctctattaactttct 5132553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 17077739 - 17077476
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||         |||||||||||||| ||||||||||||||||||||    
T  17077739 ttaaatatgcctttagtccttgcactttcatcagattttgacattggtccctacactttttttttgtttggaattggtctctgcactttgtaaaaatatt 17077640  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| |||||||||||||||||| ||          |||||||||||| | ||||||| || | |||||| |||||||||||||||||| |||| ||    
T  17077639 ggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattag-tattggt-ccatgcacttt-gtaaaaatattggtattggtccc-tg 17077544  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||||||| |||||   || ||||||||||||||| ||||||||||| |||||    
T  17077543 cactttgtaaaaatattgatattgg-tgccatg-tggcgtgaaatgattggctacgtggcactccgttgg 17077476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 756
Target Start/End: Original strand, 6782569 - 6782780
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  6782569 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgatccctgcactttgtaaaaatattg 6782668  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||| ||||| ||         ||||||||||||  ||||||||| ||| ||| ||||||||||||||||||||| | |||||||    
T  6782669 gtattggtccctctattaattttctgttaaaaaaaaacacaaaactatt-agtattggtt-cctgcac-tttgtaaaaatattggtattggt-ccctgca 6782764  T
Q  741 ctttgtaaaaatattg 756  Q
    |||| |||||||||||    
T  6782765 ctttctaaaaatattg 6782780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 36466346 - 36466127
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||         ||||||||||| |||||| |||||||||||||||||    
T  36466346 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattgatccctgtactttgtaaaaatattg 36466247  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||||||||| |||||||| ||||| ||| |||||| |||||||||||||| | ||||||    
T  36466246 gtattggtccctctattaactttctgttaaaaataaaacacaaaactatt-ggtattgg-tccctgcac-tttgtagaaatattggtattggt-ccctgc 36466151  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||    
T  36466150 actttgtaaaaatattgatattgg 36466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 535 - 802
Target Start/End: Complemental strand, 40125199 - 40124935
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||        |||||||||| | |||||||||||||||||    
T  40125199 aaaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattagcccctgcactttgtaaaa 40125100  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncaca--aaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    |||||| ||||||||| ||| ||||| |||| ||          |||  |||||||||| ||||||| |||| |||||| |||||||||||||||||| |    
T  40125099 atattggtattgatccatctgttaaccttctgttaaaaaaaaaaacagaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggt 40125003  T
Q  733 cccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactc 802  Q
    ||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||| |||||||||||||    
T  40125002 ccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattggaccacgtggcactc 40124935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 533 - 665
Target Start/End: Complemental strand, 2937195 - 2937064
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||    
T  2937195 ataaaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaa 2937097  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||||||||||||||    
T  2937096 aaatattggtattggtccctctattaactttct 2937064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 536 - 817
Target Start/End: Original strand, 14291249 - 14291523
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||  |||||||||||||||||||| ||||||||  ||||||||| ||||        ||||||||||| |||||||||||||||||||    
T  14291249 aaggtttaaatatgcatttagtccttgcactttcattagattttgatattggtccctacacttttttttgtttggaattgatccctgcactttgtaaaaa 14291348  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| |||||||||||||||||| ||         |||||||||||| | |||||| ||||| ||| ||||||||||||||||||||| | ||    
T  14291349 tattggtattggtccctctattaactttctgtt-aaaaaaaacacaaaactatt-gatattgg-tccctgcac-tttgtaaaaatattggtattggt-cc 14291443  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||| | |||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  14291444 ctgtattttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 14291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 533 - 763
Target Start/End: Original strand, 37350935 - 37351163
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||    
T  37350935 ataaaggtttaaatatgcctttaatccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaa 37351034  T
Q  633 aaatattgatattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
    |||||||| ||||| |  ||||||||||||||| ||           |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||    
T  37351035 aaatattggtattggtttctctattaactttctgttaaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattg 37351131  T
Q  731 atcccctgcactttgtaaaaatattgatattgg 763  Q
     | || |||||||||||||||||||||||||||    
T  37351132 gt-ccatgcactttgtaaaaatattgatattgg 37351163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 14556423 - 14556162
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  14556423 ttaaatatatctttagtccctgcactttcatcagattttggcatttgtccctacacttttttttgtttggaattgatccctgcactttgtaaaaatattg 14556324  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||||||||||| |||||||||| ||         ||| |||||||| |||||| | |||||  || |||||||||||||||||||| |  |||||||    
T  14556323 gtattgatccctctgttaactttctgtt-aaaaaaaacaccaaactatt-ggtattag-tccctgtac-tttgtaaaaatattggtatt-agtccctgca 14556229  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||||||| | ||  ||||||||||||| ||||||||||||| |||||    
T  14556228 ctttgtaaaaatattgatatt-ggtgcca-cgtggtgtgaaatgattggaccacgtggcactccgttgg 14556162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 535 - 789
Target Start/End: Complemental strand, 32487278 - 32487029
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||| |||||||||    
T  32487278 aaaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacacttatttttgtttggaattggtccctgcaatttgtaaaa 32487179  T
Q  635 atattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    |||||| ||||||||||||| ||||| |||| ||          |||||||||||| |||| ||| ||||| ||  ||||||||||||||||||||| |     
T  32487178 atattggtattgatccctctgttaaccttctgttaaaaaaaaaacacaaaactatt-ggtactgg-tccctgca-gtttgtaaaaatattggtattggt- 32487083  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
    || ||||||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  32487082 ccatgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgg 32487029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 533 - 802
Target Start/End: Complemental strand, 36302846 - 36302581
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| || |||         ||||||||||||||| || |||||||||    
T  36302846 ataaaggcttaaatatgcctttagtccctgcactttcatcagattttggcattggttcctacatttttttttgtttggaattggtccttgtactttgtaa 36302747  T
Q  633 aaatattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattga 731  Q
    |||||||| ||||||||||||| |||||||||| ||          |||||||||||| |||||| | ||||||||| |||||||||||||| ||||||     
T  36302746 aaatattggtattgatccctctgttaactttctgttaaaaaaaaaacacaaaactatt-ggtattag-tccctacac-tttgtaaaaatattagtattgg 36302650  T
Q  732 tcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    | | |||||||||||||||||||||||||| ||||||||  ||  ||||||||||| |||||||||||||||    
T  36302649 t-ctctgcactttgtaaaaatattgatatt-ggtgccacgttg-tgtgaaatgattgggccacgtggcactc 36302581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 47672354 - 47672230
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  47672354 ttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 47672255  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  47672254 gtattggtccctctattaactttct 47672230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 38019375 - 38019108
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  38019375 ttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacacatttttttgtttgaaattggtccctgcactttgtaaaaatattg 38019276  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||   ||| |           |||||||||||| |||||||| |||||  || ||||||||||||||||||||| | || ||||    
T  38019275 gtattggtccctctatta--gttc-aaaaaaaaaaaacacaaaactatt-ggtattgg-tccctgtac-tttgtaaaaatattggtattggt-ccttgca 38019183  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||| | ||| ||||||||||    
T  38019182 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcacaccgtt-ggttttgtgt 38019108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 30057338 - 30057076
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||         ||||||||||| || |||||||||||||||||||||    
T  30057338 ttaaatatgcctttagtcattgcactttcatcagattttggcattggtccct-caattttttttgtttggaattgatctctgcactttgtaaaaatattg 30057240  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||||||||||| |||||||| | ||           |||||||||||||| |||||||  ||| |||||| |||||||||||||||||| |||| ||    
T  30057239 gtattgatccctctgttaactttgtgttaaaaaaaaaagcacaaaactattgg-tattggt--cctgcacttt-gtaaaaatattggtattggtccc-tg 30057145  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgg 808  Q
    ||||||||||||||||||| ||||| || |||  || ||||||||||| || |||||||||||||||||||    
T  30057144 cactttgtaaaaatattgacattgg-tgtcacg-tggcgtgaaatgatcgggccacgtggcactctgttgg 30057076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 2731123 - 2730993
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||         |||||||||||||||||||| |||||||||    
T  2731123 aaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctacactttttttttgtttggaattggtccctgcattttgtaaaa 2731024  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||| ||||||||||    
T  2731023 atattggtattggtccctctcttaactttct 2730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 49628502 - 49628379
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||         |||||||||| ||||||||||||||||||||||||    
T  49628502 ttaaatatctctttagtccttgcactttcattagattttggcattggtccctacactttttttttgtttggaattagtccctgcactttgtaaaaatatt 49628403  T
Q  640 gatattgatccctctattaacttt 663  Q
    | ||||| ||||||||||||||||    
T  49628402 ggtattggtccctctattaacttt 49628379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 32005464 - 32005593
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||        ||||| |||||||||||||||||||||||    
T  32005464 taaaggtttaaatatgtctttagtcctt-cactttcatcagattttagcattggtccttacacttttttt-gtttgaaattggtccctgcactttgtaaa 32005561  T
Q  634 aatattgatattgatccctctattaactttct 665  Q
    ||||||||||||  ||||||||||||||||||    
T  32005562 aatattgatattagtccctctattaactttct 32005593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 536 - 652
Target Start/End: Complemental strand, 5905148 - 5905032
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||| ||||||||||||     
T  5905148 aaggtttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaac 5905049  T
Q  636 tattgatattgatccct 652  Q
    ||||| ||||| |||||    
T  5905048 tattggtattggtccct 5905032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 36465933 - 36466063
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| ||||||||||||||||||||  |||||||||  |||        |||||| |||||||||||||||||||||||    
T  36465933 aaaggtttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 36466032  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||| ||||||||||    
T  36466033 atattggtattgatccctctgttaactttct 36466063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 39950230 - 39950360
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnng-tttggaattggtccctgcactttgtaaaa 634  Q
    |||| |||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||          ||| |||||||||||||||||||||||||    
T  39950230 aaggtttaaatatgtctttagtctttacactttcatcagattttggtattggtccctacactttttttttatttagaattggtccctgcactttgtaaaa 39950329  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||| ||| ||||||||||    
T  39950330 atattggtattgatccatctgttaactttct 39950360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 38717745 - 38717616
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||||||||||||||||||||   |||        |||||| ||||||||||||||||||||||||    
T  38717745 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccctgcactttgtaaaaa 38717646  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  38717645 tattggtattggtccctctgttaactttct 38717616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 1342435 - 1342559
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||| ||||||||||||||||||||||||    
T  1342435 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaaaaatattg 1342534  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  1342535 gtattggtccctctgttaactttct 1342559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 5132741 - 5132617
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  5132741 ttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 5132642  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  5132641 gtattggtccctctgttaactttct 5132617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 17077329 - 17077453
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||||||||||||||||| |||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  17077329 ttaaatgtgtcattggtccttgcactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 17077428  T
Q  641 atattgatccctctattaactttct 665  Q
     |||| ||| |||| ||||||||||    
T  17077429 gtattaatctctctgttaactttct 17077453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 25379002 - 25378893
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| ||||||||||||||||||||||||||||| |  |||        |||||| ||||||||||||||||||||||||||||| ||||| |||||||     
T  25379002 gtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattgttattggtccctctg 25378903  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  25378902 ttaactttct 25378893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 535 - 663
Target Start/End: Complemental strand, 29721502 - 29721374
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||| || ||||         ||||| |||||||||||||||||||||||    
T  29721502 aaaggcttaaatatgtctctagtccctgcactttcatcagattttggcattggttcctacactttttttttgtttgcaattggtccctgcactttgtaaa 29721403  T
Q  634 aatattgatattgatccctctattaacttt 663  Q
    |||||| |||||| | ||||| ||||||||    
T  29721402 aatattaatattggt-cctctgttaacttt 29721374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 664
Target Start/End: Original strand, 39758976 - 39759077
Alignment:
Q  563 cactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactt 662  Q
    |||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  39758976 cactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactt 39759075  T
Q  663 tc 664  Q
    ||    
T  39759076 tc 39759077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 664
Target Start/End: Original strand, 39764330 - 39764431
Alignment:
Q  563 cactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactt 662  Q
    |||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  39764330 cactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactt 39764429  T
Q  663 tc 664  Q
    ||    
T  39764430 tc 39764431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 6782971 - 6782847
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||  |||        |||||| |||||||| ||||||||| ||||||||||    
T  6782971 ttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgcaaaaatattg 6782872  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  6782871 gtattggttcctctgttaactttct 6782847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 25378778 - 25378882
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  25378778 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 25378873  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  25378874 gttttgtgt 25378882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 28487031 - 28486908
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||| ||||||||||||||  |||        |||||| |||||||| ||||||||||||||||||||    
T  28487031 ttaaatgtgtcattggtccctgcactttcatcagatattggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaatattg 28486932  T
Q  641 atattgatccctctattaactttct 665  Q
    |||||| |||||| |||||||||||    
T  28486931 atattggtccctc-attaactttct 28486908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 45950906 - 45951030
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||  |||||||||||||||||||||||||||||    
T  45950906 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactttgtaaaaatattg 45951005  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || |||| ||||||||||    
T  45951006 gtattggtctctctgttaactttct 45951030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 47647861 - 47647985
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||| |  |||        || ||| |||||||||||||||||||||||||||||    
T  47647861 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtatggcattggtccctgcactttgtaaaaatattg 47647960  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  47647961 gtattggtccctctgttaactttct 47647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 44396452 - 44396397
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44396452 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 44396397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 659
Target Start/End: Complemental strand, 37351343 - 37351225
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||||   |||        |||||| |||||||| ||| ||||||||||||||||    
T  37351343 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccatgcgctttgtaaaaatattg 37351244  T
Q  641 atattgatccctctattaa 659  Q
    |||||||||||||| ||||    
T  37351243 atattgatccctctgttaa 37351225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 535 - 665
Target Start/End: Complemental strand, 39759336 - 39759207
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||||||||||||||||| ||||||||||||  |||        |||||| |||| ||||||||||||||||||    
T  39759336 aaaggtttaaatgtgtcattggtccctgcactttcatcagattt-ggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaaaa 39759238  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||| ||||||||||    
T  39759237 atattggtattggtccctctgttaactttct 39759207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 23253323 - 23253452
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || ||||||  ||||||||||||||||||||||||||||  |||        |||||| ||| |||| |||||||||||||||    
T  23253323 aaggtttaaatgtgtcattggtccttcaactttcatcagattttggcattggtccctgcacttttttttgtttggcattagtccatgcactttgtaaaaa 23253422  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  23253423 tattggtattggtccctctgttaactttct 23253452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 32486862 - 32486987
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||||||||  ||          |||||| ||||||||||||||||||||||||||||    
T  32486862 ttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgcagtttttttttgtttggcattggtccctgcactttgtaaaaatatt 32486961  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| |||||||  |||||||||    
T  32486962 ggtattggtccctctgctaactttct 32486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 652
Target Start/End: Original strand, 2930979 - 2931075
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  2930979 gtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccct 2931075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 7839018 - 7838801
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||  |  |||||||||||||||||||||||||| | ||||        ||||| ||||||||| | |||| | | |||||||||    
T  7839018 ttaaatatgtctttagtctataaactttcatcagattttggcattggtctctacactttattttgtttgaaattggtccatacactatatcaaaatattg 7838919  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||         ||||||||||||  ||||||| ||||||||| ||||||||| ||||||||||| |  | || |    
T  7838918 gtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-agtattgg-tccctacac-tttgtaaaattattggtattggt--cttgaa 7838824  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||| ||||||||||||    
T  7838823 ctttgtaaaactattgatattgg 7838801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 678 - 817
Target Start/End: Original strand, 29548662 - 29548795
Alignment:
Q  678 cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccg 777  Q
    |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| | ||||||||||||||||||||||| | ||||| | || ||    
T  29548662 cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tacactttgtaaaaatattgatatt-gttgcca-cgtggcg 29548755  T
Q  778 tgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||| ||||||||||||||| ||| ||||||||||    
T  29548756 tgaaatgattgggccacgtggcactccgtt-ggttttgtgt 29548795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 52346531 - 52346471
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  52346531 gtttggaattggtccatgcactttgtaaaaatattggtattggtccctctattaactttct 52346471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 536 - 652
Target Start/End: Original strand, 25378686 - 25378804
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtt--tggaattggtccctgcactttgtaaa 633  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||          |  ||| ||||||||||||||||||||||    
T  25378686 aaggtttaaatatgtctttagtctttgcactttcatcagattttggcattggtccctgcactttgtaaaaatattggtattggtccctgcactttgtaaa 25378785  T
Q  634 aatattgatattgatccct 652  Q
    ||||||| ||||| |||||    
T  25378786 aatattggtattggtccct 25378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 561 - 663
Target Start/End: Original strand, 30056950 - 30057053
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaa 659  Q
    ||||||||||||||||||||||||||||||| ||||         |||||| |||||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  30056950 tgcactttcatcagattttggcattggtccctacactttttttttgtttggcattggtccttgcactttgtaaaaatattggtattggtccctctgttaa 30057049  T
Q  660 cttt 663  Q
    ||||    
T  30057050 cttt 30057053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 536 - 663
Target Start/End: Original strand, 36302426 - 36302553
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||||||||||||||||||||   |||        |||||| ||||||||||| ||||||||||||    
T  36302426 aaggtttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccatgcacttttttttgtttggcattggtccctgtactttgtaaaaa 36302525  T
Q  636 tattgatattgatccctctattaacttt 663  Q
    ||||| ||||| | ||||| ||||||||    
T  36302526 tattggtattggttcctctgttaacttt 36302553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 49628130 - 49628252
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||| || |||| ||||||||||||||||||||||||| |||||  |||        |||||  |||||||||||||||||||||||||||||    
T  49628130 ttaaatatgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttt-gtttgacattggtccctgcactttgtaaaaatattg 49628228  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||||||||||||||    
T  49628229 gtattggt-cctctattaactttct 49628252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 700 - 817
Target Start/End: Complemental strand, 5905067 - 5904954
Alignment:
Q  700 tccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattg-gccacgtggc 798  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||| |||| || | || ||||||||||||| ||||||||||    
T  5905067 tccctacacttt-gtaaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgtca-cgtggcgtgaaatgattgagccacgtggc 5904972  T
Q  799 actctgttgggttttgtgt 817  Q
    |||| ||| ||||||||||    
T  5904971 actccgtt-ggttttgtgt 5904954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 29548584 - 29548634
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29548584 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccc 29548634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 715 - 808
Target Start/End: Original strand, 39759095 - 39759186
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  39759095 aaaactattggtattgatccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 39759186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 715 - 808
Target Start/End: Original strand, 39764449 - 39764540
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  39764449 aaaactattggtattgatccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 39764540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 2730755 - 2730863
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||| ||||||||||||||||||||||  |||        |||||  ||||||||||||||||||||||||||||| ||||| |||||||     
T  2730755 gtccctgcacttttatcagattttggcattggtccctgcacttttttt-gtttgacattggtccctgcactttgtaaaaatattggtattggtccctctg 2730853  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  2730854 ttaactttct 2730863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 29548869 - 29548809
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  29548869 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 29548809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 1366647 - 1366588
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  1366647 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 1366588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 5904811 - 5904941
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcaga-ttttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    |||| |||||| |||| || |||| |||||||| |||||| ||||||||||||||||  |||        |||||| |||||||| ||||||||||||||    
T  5904811 aaggtttaaatgtgtcattggtccctgcacttttatcagaattttggcattggtccctgcacttttttttgtttggcattggtccatgcactttgtaaaa 5904910  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||  ||||||||||    
T  5904911 atattggtattggtccctcggttaactttct 5904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 563 - 665
Target Start/End: Complemental strand, 15875202 - 15875100
Alignment:
Q  563 cactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactt 662  Q
    |||||| ||||||||||||||||||||||  |||        |||||  |||||||||||||||||||||||||||||  |||| ||||||| |||||||    
T  15875202 cacttttatcagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactttgtaaaaatattggcattggtccctctgttaactt 15875103  T
Q  663 tct 665  Q
    |||    
T  15875102 tct 15875100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 541 - 659
Target Start/End: Original strand, 52346232 - 52346350
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||  || |||| |||||||||||||||||||||||||||||||  |||        |||||  ||||||| |||||||||||||||||||||    
T  52346232 ttaaatatgttattggtccatgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtctctgcactttgtaaaaatattg 52346331  T
Q  641 atattgatccctctattaa 659  Q
     ||||  ||||||| ||||    
T  52346332 gtattagtccctctgttaa 52346350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 39524272 - 39524372
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac--nnnnnnnngtttggaattggtccctgcactttgtaaaaatat 638  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||          ||||||||||||||||||||||||||||||||||    
T  39524272 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttttgtttggaattggtccctgcactttgtaaaaatat 39524371  T
Q  639 t 639  Q
    |    
T  39524372 t 39524372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 47672045 - 47672098
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  47672045 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 47672098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 817
Target Start/End: Complemental strand, 2937029 - 2936948
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  2937029 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 2936948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 40124848 - 40124908
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||||||  |||||||||    
T  40124848 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgctaactttct 40124908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 817
Target Start/End: Complemental strand, 47672193 - 47672112
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  47672193 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 47672112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 2730976 - 2730877
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| || |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  2730976 aaaactattggtattggtccc-tgtactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 2730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 4806851 - 4806792
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||||||| || | |||||||||||||||||||||||| ||||||||||| ||||    
T  4806851 cttaattcagttggtagagacaatgtataatatatgtaaggtttgaggttcaaacctcga 4806792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 14556019 - 14556142
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||| ||||  |||        |||||| |||||||| || |||||||||||||||||    
T  14556019 ttaaatgtgtcattggtccctgcactttcatcagattttgacattgatccctgcacttttttt-gtttggcattggtccttgtactttgtaaaaatattg 14556117  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  14556118 gtattggtccctctgttaactttct 14556142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 29715457 - 29715516
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||    
T  29715457 tttggcattggtccctgtactttgtaaaaatattggtattggtccctctgttaactttct 29715516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 4487091 - 4487041
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  4487091 ttaaatatgtctttactccttgcactttcatcagatttttacattggtccc 4487041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 13401598 - 13401656
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||| ||||||||||| | |||||| ||||||||||||||||||| |||||||||    
T  13401598 tgagcttagttcagttgatagagacaatgcataatatatgtaaggttcggggttcaaac 13401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 15382879 - 15382825
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttc 500  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||    
T  15382879 tgagcttaactcagttgatatgaacaatgtataatatatgcaaggtccgaggttc 15382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 665
Target Start/End: Original strand, 50755682 - 50755784
Alignment:
Q  563 cactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactt 662  Q
    |||||||||||||||||||||||||||||   ||        |||| | ||||||||||||||||| ||||||||||| ||||| || |||| |||||||    
T  50755682 cactttcatcagattttggcattggtccctgtacttttttttgtttagcattggtccctgcactttataaaaatattggtattggtctctctgttaactt 50755781  T
Q  663 tct 665  Q
    |||    
T  50755782 tct 50755784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 434 - 491
Target Start/End: Complemental strand, 5553073 - 5553016
Alignment:
Q  434 tagatgtgcttatgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||| ||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  5553073 tagatgtccttgtgggcttaactcagttgatatgaacaatgtataatatatgtaaggt 5553016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 25378747 - 25378799
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||    
T  25378747 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattggtattgg 25378799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 28838513 - 28838388
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||    |||         |||||| ||||||||||||||||||||||||||||    
T  28838513 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctatgcactttttttttgtttggcattggtccctgcactttgtaaaaatatt 28838414  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||| |  |||||||||    
T  28838413 ggtattggtccctatgataactttct 28838388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 763
Target Start/End: Complemental strand, 44396309 - 44396257
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  44396309 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattaatattgg 44396257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 44519363 - 44519467
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||| ||||||||||||||||||||||||||  ||         |||||| |||| ||| |||||||||||||||||||  ||||| ||||||| |||||    
T  44519363 tgcattttcatcagattttggcattggtccctgcatttttttttgtttggcattgatccttgcactttgtaaaaatattagtattggtccctctgttaac 44519462  T
Q  661 tttct 665  Q
    |||||    
T  44519463 tttct 44519467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 2937040 - 2937001
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  2937040 ttggcattggtccctgcactttgtaaaaatattgatattg 2937001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 3777719 - 3777782
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||| |||||||||||  | ||||||||||||||  |||||||||||||||||| ||||    
T  3777719 tgagcttaactcagttgatatggataatgtataatatatacaaggttcgaggttcaaacctcga 3777782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 5905046 - 5905007
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5905046 ttggtattggtccctgcactttgtaaaaatattgatattg 5905007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 25378790 - 25378829
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  25378790 ttggtattggtccctgcactttgtaaaaatattgatattg 25378829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 32005615 - 32005654
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32005615 ttggtattggtccctgcactttgtaaaaatattgatattg 32005654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 448 - 515
Target Start/End: Original strand, 35632902 - 35632969
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcgatcatca 515  Q
    |||||| ||||||||||||  |||||| ||||||||| ||||||| |||||||||| |||| ||||||    
T  35632902 agcttatttcagttgatatggacaatgcataatatatataaggtttgaggttcaaatttcggtcatca 35632969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 39950377 - 39950476
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||   || |||||||||||| || |||||||||||| ||| ||||||    
T  39950377 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-tttggcgtgaaatgattgggtcacgtggcactccgtt-ggtttt 39950472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 39950384 - 39950423
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  39950384 ttggtattggtccctgcactttgtaaaaatattgatattg 39950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 49628359 - 49628320
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  49628359 ttggtattggtccctgcactttgtaaaaatattgatattg 49628320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 1366683 - 1366633
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  1366683 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 1366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 806
Target Start/End: Complemental strand, 29715796 - 29715539
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||| |||| ||||||||| |||||||||||||||||||| |||| ||| | ||||        |||| |||||| |||||| ||||||||||||||||     
T  29715796 ttaactatgcctttagtccctgcactttcatcagattttgacattagtctctacacttttttttgttttgaattgatccctgtactttgtaaaaatatta 29715697  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| || || | |||||||||| ||         ||||||  |    |||||| || |||| ||||||  ||||||||||||||||| ||   ||||    
T  29715696 gtattggtctctttgttaactttctgttaaaaaaaaacacaaactt----ggtattagt-ccctgcacttta-taaaaatattggtattggtcaa-tgca 29715604  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    ||||||||||||||||||||| |||| || | ||  ||||||||||| |||||||||||||||||||    
T  29715603 ctttgtaaaaatattgatatt-ggtgtca-cgtggtgtgaaatgattgggccacgtggcactctgtt 29715539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 652
Target Start/End: Complemental strand, 38291343 - 38291297
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  38291343 tttggcattggtccctgcactttgtaaaaatattggtattggtccct 38291297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 646
Target Start/End: Complemental strand, 38872919 - 38872813
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||         |||||| |||||||||||||||| |||||||||||    
T  38872919 ttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcactttttttttgtttggcattggtccctgcacttcgtaaaaatatt 38872820  T
Q  640 gatattg 646  Q
    | |||||    
T  38872819 ggtattg 38872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 52262229 - 52262167
Alignment:
Q  443 ttatgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||||||| ||||||| ||| ||||||| |||| ||||| || ||||||||||||||||    
T  52262229 ttatgagcttaactcagttggtatgaacaatgcataaaatatgcaaagttcgaggttcaaact 52262167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 715 - 808
Target Start/End: Complemental strand, 52346457 - 52346366
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||| ||||||||||| |||| |||| ||||||||||||||| |||| ||||||| | || |||||||||||| ||||||| |||||||||||||    
T  52346457 aaaactattggtattggtccc-tgcattttgtaaaaatattggtatt-ggtgcca-cgtggcgtgaaatgattgggccacgcggcactctgttgg 52346366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 652
Target Start/End: Original strand, 29548672 - 29548717
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  29548672 ttggtattggtccctgcactttgtaaaaatattggtattggtccct 29548717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 788
Target Start/End: Complemental strand, 49628366 - 49628296
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattg 788  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||    
T  49628366 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtgacgtgaaatgattg 49628296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 664
Target Start/End: Original strand, 7838683 - 7838735
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttc 664  Q
    ||||||||||||| ||||||||||||||| ||||| || |||| |||||||||    
T  7838683 attggtccctgcattttgtaaaaatattggtattggtctctctgttaactttc 7838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 763
Target Start/End: Original strand, 32005608 - 32005655
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  32005608 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg 32005655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 535 - 591
Target Start/End: Original strand, 47671997 - 47672053
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||| |||||| |||| || |||| |||||||||||||||||| ||||||||||||    
T  47671997 aaaggtttaaatgtgtcattggtccctgcactttcatcagatttaggcattggtccc 47672053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 2730969 - 2730930
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  2730969 ttggtattggtccctgtactttgtaaaaatattgatattg 2730930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 491
Target Start/End: Complemental strand, 3528519 - 3528484
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggt 491  Q
    |||||||||| |||||||||||||||||||||||||    
T  3528519 tcagttgatagaaacaatgtataatatatgtaaggt 3528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 505
Target Start/End: Complemental strand, 16967242 - 16967195
Alignment:
Q  458 agttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||    
T  16967242 agttgatatggacaatgcataatatatgcaaggttcgaggttcaaact 16967195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 17669646 - 17669705
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||| | ||||||||||   ||||||||||||||||| |||||||| ||||||||||    
T  17669646 tgagcttgactcagttgatagggacaatgtataatatatgcaaggttcggggttcaaact 17669705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 23045192 - 23045255
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||| || ||| |||| ||||||| |||||||||||||||| ||  |||||||||||||    
T  23045192 tgagcttaactccgttaatatgaacaatgcataatatatgtaaggtccggagttcaaacttcga 23045255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 29548703 - 29548742
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  29548703 ttggtattggtccctacactttgtaaaaatattgatattg 29548742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Complemental strand, 32005760 - 32005713
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggt 588  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||    
T  32005760 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 32005713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 32950821 - 32950758
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||| ||||||| ||||||||||| |||||||||| ||||| ||  |||||||| ||||    
T  32950821 tgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagttcaaacctcga 32950758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 39759102 - 39759141
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  39759102 ttggtattgatccctgcactttgtaaaaatattgatattg 39759141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 39764456 - 39764495
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  39764456 ttggtattgatccctgcactttgtaaaaatattgatattg 39764495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 44396297 - 44396258
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  44396297 ttggtattggtccctgcactttgtaaaaatattaatattg 44396258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 646
Target Start/End: Complemental strand, 47672196 - 47672165
Alignment:
Q  615 ggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||||||||||||||||||||||||||||||    
T  47672196 ggtccctgcactttgtaaaaatattgatattg 47672165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 3693856 - 3693798
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||  |||||||||||| |||| | ||||||||||||||||  |||||||||||    
T  3693856 tgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttcaaac 3693798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 10841901 - 10841959
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| |||||||||||  |||||| ||||||||| ||||||| ||| |||||||    
T  10841901 tgagcttaactcagttgatatggacaatgcataatatatataaggtttgagattcaaac 10841959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 30678873 - 30678811
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcg 508  Q
    ||||||||| ||||||| ||   |||||| ||||||||||||||||||  |||||||||||||    
T  30678873 tgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttcaaacttcg 30678811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 33153940 - 33153882
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||| ||   |||||| |||||||||||||||| ||||||||||||    
T  33153940 tgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaac 33153882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 512
Target Start/End: Original strand, 42372799 - 42372841
Alignment:
Q  470 caatgtataatatatgtaaggttcgaggttcaaacttcgatca 512  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  42372799 caatgcataatatatgtaaggttataggttcaaacttcgatca 42372841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 43284090 - 43284032
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||  || | |||||||||||||||||||||||| | |||||||||    
T  43284090 tgagcttaactcagttagtagagacaatgtataatatatgtaaggtttgtggttcaaac 43284032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 583
Target Start/End: Complemental strand, 52346585 - 52346543
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggca 583  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  52346585 ttaaatatgcttttagtccttgtactttcatcagattttggca 52346543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 14291588 - 14291536
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||| ||||||||||    
T  14291588 attggtctctgcactttgtaaaaatattggtattggt-cctctgttaactttct 14291536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 16580859 - 16580814
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||||||||||| |||  ||||||||||||||||| |||||    
T  16580859 tgagcttaattcagttggtatggacaatgtataatatatgcaaggt 16580814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 34632170 - 34632227
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||  ||||||| |||| ||||||||||||||||| ||| | |||||||||||    
T  34632170 tgagcttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaa 34632227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #128
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 44396328 - 44396283
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  44396328 ttggtattggtcactgcactttgtaaaaatattggtattggtccct 44396283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #129
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 504
Target Start/End: Complemental strand, 50372420 - 50372363
Alignment:
Q  447 gagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||  ||||||||||||||||||| ||||||||| | ||||  |||||||||||    
T  50372420 gagcttagctcagttgatataaacaatgcataatatatatcaggtctgaggttcaaac 50372363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 2e-57; HSPs: 110)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 541 - 789
Target Start/End: Complemental strand, 47358566 - 47358323
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  47358566 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 47358467  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||||||   |||||||||||||||| | |||||||    
T  47358466 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcactttgtaaaaaatattggtattggt-ccctgca 47358370  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  47358369 ctttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgg 47358323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 536 - 817
Target Start/End: Original strand, 40790807 - 40791080
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||||||    
T  40790807 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaa 40790905  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||| | ||    
T  40790906 tattggtattggtccctctattaactttctgtt-aaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttataaaaatattggtattggt-cc 40791000  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||| || ||||||||| |||||| ||||||||||    
T  40791001 ctgcactttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggtcacgtggcattctgtt-ggttttgtgt 40791080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 535 - 817
Target Start/End: Original strand, 11692152 - 11692429
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||        ||||||||||||||||||||||||||||||    
T  11692152 aaaggtttaaatatgcctttagtccttgcactttcatcagattttgacattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaa 11692251  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    |||||| ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| ||    
T  11692252 atattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtc 11692348  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    || ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  11692349 cc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 11692429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 16731922 - 16732183
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||         |||| ||||||||| |||||||||||||||||||||    
T  16731922 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgttttgaattggtctctgcactttgtaaaaatattg 16732020  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     |||||||||||||||||||||||||||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  16732021 gtattgatccctctattaactttctattaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgca 16732116  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||||||| | || | |||||||||| ||||||||||||||| |||||    
T  16732117 ctttgtaaaaatattgatatt-ggtgcca-cgtggcatgaaatgattgggccacgtggcactccgttgg 16732183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 544 - 817
Target Start/End: Original strand, 51753901 - 51754169
Alignment:
Q  544 aatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgata 643  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||        |||||||||||| ||||||||||||||||||||||| ||    
T  51753901 aatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggcccctgcactttgtaaaaatattggta 51754000  T
Q  644 ttgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcact 742  Q
    ||| |||||||||||||||||| ||          |||||||||||||| ||||||| | || || |||||||||||||||||||||| |||| ||||||    
T  51754001 ttggtccctctattaactttctgttaaaaaaagaacacaaaactattgg-tattggt-ctctgca-ttttgtaaaaatattggtattggtccc-tgcact 51754096  T
Q  743 ttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||| ||||||||  || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  51754097 ttgtaaaaatattgatatt-ggtgccacgttg-cgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 51754169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 21561215 - 21560938
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaa 634  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||    
T  21561215 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaa 21561116  T
Q  635 atattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    |||||| ||||| |||||||||||||||||| ||          |||||||||||| | |||||| ||||| ||| |||||||||||  |||||||| |     
T  21561115 atattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactatt-gttattgg-tccctgcac-tttgtaaaaattatggtattggt- 21561020  T
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    | |||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  21561019 ctctgcactttgtaaaaatattgatatt-ggtgcca-cgtgacgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 21560938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 533 - 808
Target Start/End: Original strand, 33092029 - 33092302
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgta 631  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||         ||||||||||||||| |||||||||||    
T  33092029 ataaaggtttaaatatgtctttagtccttgcactttcatcagtttttggcattggtccctacactttttttttgtttggaattggtccttgcactttgta 33092128  T
Q  632 aaaatattgatattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtatt 729  Q
    ||||||||| ||||| |||||||||||||||||| ||           |||||||||||| |||||||| ||||  ||| ||||||||||||||||||||    
T  33092129 aaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactatt-ggtattgg-tccccgcac-tttgtaaaaatattggtatt 33092225  T
Q  730 gatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    | | | |||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||||| |||||    
T  33092226 ggt-cactgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattcggccatgtggcactccgttgg 33092302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 541 - 806
Target Start/End: Original strand, 40036649 - 40036906
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||        |||||||||||||||||||||||| |||||||||||    
T  40036649 ttaaatatgtctttagtccttgcactttcattagattttgatattggtccctacacttttttttgtttggaattggtccctgcactttataaaaatattg 40036748  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||          ||| ||||||||| |||||||||| | |||||| ||||||||||| |||||| |||| ||||    
T  40036749 gtattggtccctctcttaactttctgttaaaaaaa---acacaactattgg-tattggttcc-tgcacttt-gtaaaaatattagtattggtccc-tgca 40036841  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    |||||||||||||||| |||| ||||||| |||| |||||||||||| |||||||||||||||||||    
T  40036842 ctttgtaaaaatattggtatt-ggtgcca-catggcgtgaaatgattgggccacgtggcactctgtt 40036906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 535 - 802
Target Start/End: Original strand, 19987832 - 19988097
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||         ||||| ||||||||||||||||||||||||    
T  19987832 aaaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacatgtttttttgtttgaaattggtccctgcactttgtaaaa 19987931  T
Q  635 atattgatattgatccctctattaactttctatt---nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattga 731  Q
    |||||||||||| ||||||| |||||||||| ||            |||||||||||| |||||| | ||||| ||| |||||||||||||| ||||||     
T  19987932 atattgatattggtccctctgttaactttctgttaaaaaaaaaaaacacaaaactatt-ggtattag-tccctgcac-tttgtaaaaatattagtattgg 19988028  T
Q  732 tcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    | |||||||||||||||||||||||||||| | ||||| | ||  ||||||||||| |||||||||||||||    
T  19988029 t-ccctgcactttgtaaaaatattgatatt-gatgcca-cgtggtgtgaaatgattgggccacgtggcactc 19988097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 535 - 763
Target Start/End: Complemental strand, 27957877 - 27957654
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||          ||| |||||||||| ||||||||||||||    
T  27957877 aaaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttttttagaattggtccatgcactttgtaaaa 27957779  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    |||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||| ||| ||||||||||| | |    
T  27957778 atattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgttaaactattggtattggt-c 27957683  T
Q  735 cctgcactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||||||||    
T  27957682 cctgcactttgtaaaaatattgatattgg 27957654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 29015721 - 29015940
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||         |||| ||||||||||||||||||||||||||||||    
T  29015721 ttaaatatgtctttagtccttgcactttcattagattttgacattggtccctacacttttttttatttgtaattggtccctgcactttgtaaaaatattg 29015820  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| ||||||| |||||||||| ||          |||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||| ||||||    
T  29015821 gtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactatt-gatattgg-tccctgcac-tttgtaaaaatattggtattgat-ccctgc 29015916  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    | ||||||||||||||||||||||    
T  29015917 aatttgtaaaaatattgatattgg 29015940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 34682691 - 34682420
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||          |||||||||||||| ||||||||||||||||||||    
T  34682691 ttaaatatgtctttagtccttgcatttttatcagattttggcattgatccctacatttttttttatttggaattggtcc-tgcactttgtaaaaatattg 34682593  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||||||||| ||           |||||||||||||| ||||| | |||| |||||| |||||||||||||||||| |||| ||    
T  34682592 gtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattgg-tattgct-ccctgcacttt-gtaaaaatattggtattggtccc-tg 34682497  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||||| |||||   || |||||||||||||| ||||||||||||| ||| ||||||||||    
T  34682496 cactttgtaaaaatattgatattgg-tgccatg-tggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 34682420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 21440971 - 21441095
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||        ||||||||||||||||||||||||||||||||||||    
T  21440971 ttaaatatgtctttaatccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 21441070  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  21441071 gtattggtccctctattaactttct 21441095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 49665706 - 49665581
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||         |||||||||||||||||||||||||||||||||||    
T  49665706 ttaaatatgtctttagtccttgcactttcatcagattttggcattggcccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 49665607  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||||||||||||||||    
T  49665606 ggtattggtccctctattaactttct 49665581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 536 - 763
Target Start/End: Original strand, 16222473 - 16222698
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  16222473 aaggcttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaa 16222571  T
Q  636 tattgatattgatccctctattaactttctatt---nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    ||||| ||||| ||||||| |||||||||| ||            |||||||||||| | |||| | ||||| ||| ||||||||||||||||||||| |    
T  16222572 tattggtattggtccctctgttaactttctgttaaaaaaaaaatacacaaaactatt-gatattag-tccctgcac-tttgtaaaaatattggtattggt 16222668  T
Q  733 cccctgcactttgtaaaaatattgatattgg 763  Q
     ||||||||||||||||||||||||||||||    
T  16222669 -ccctgcactttgtaaaaatattgatattgg 16222698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 44638411 - 44638540
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||        ||||||||||||||| |||||||||||||||    
T  44638411 aaggtttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccatgcactttgtaaaaa 44638510  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| || |||||||||||||||    
T  44638511 tattggtattggtctctctattaactttct 44638540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 51761178 - 51760960
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||| ||||||||||| |||||  |||        |||||| || ||||||||||||||||||||||||||    
T  51761178 ttaaatgtgtcattggtccctgcactttcatcatattttggcattagtccctgcacttttttttgtttggcatcggtccctgcactttgtaaaaatattg 51761079  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||| | || ||||    
T  51761078 gtattggtccctctattaactttctgttcaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttataaaaatattggtattggt-ccatgca 51760983  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||    
T  51760982 ctttgtaaaaatattgatattgg 51760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 47982738 - 47982616
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||        ||||| ||||||||| ||||||||||||||||||||    
T  47982738 ttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaatattg 47982639  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||||||||||||    
T  47982638 gtattggtccctctattaacttt 47982616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 47992025 - 47991903
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||        ||||| ||||||||| ||||||||||||||||||||    
T  47992025 ttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaatattg 47991926  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||||||||||||    
T  47991925 gtattggtccctctattaacttt 47991903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 48001312 - 48001190
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||        ||||| ||||||||| ||||||||||||||||||||    
T  48001312 ttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaatattg 48001213  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||||||||||||    
T  48001212 gtattggtccctctattaacttt 48001190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 48010599 - 48010477
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||        ||||| ||||||||| ||||||||||||||||||||    
T  48010599 ttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaatattg 48010500  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||||||||||||    
T  48010499 gtattggtccctctattaacttt 48010477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 541 - 646
Target Start/End: Complemental strand, 35565481 - 35565376
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||        ||||| ||||||||||||||||||||||||||||||    
T  35565481 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 35565382  T
Q  641 atattg 646  Q
    ||||||    
T  35565381 atattg 35565376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 536 - 652
Target Start/End: Original strand, 44397923 - 44398039
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  44397923 aaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 44398022  T
Q  636 tattgatattgatccct 652  Q
    ||||| ||||| |||||    
T  44398023 tattggtattggtccct 44398039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 55328444 - 55328703
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||| |||         |||||||||||||||||||| ||||||||||||||     
T  55328444 ttaaatatgcctttagtccttacactttcatcagattttgacattggtccctaca-ttttttttgtttggaattggtccctgcattttgtaaaaatattc 55328542  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||| |||||||||| | ||         |||||||||||||| ||||||| | || |||||| |||||||||||||||||| |||  ||||    
T  55328543 gtattggtccctttattaacttt-tgttaaaaaaaa-cacaaaactattgg-tattggt-ctctgcacttt-gtaaaaatattggtattggtcca-tgca 55328636  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||| ||||| |||||    
T  55328637 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgacactccgttgg 55328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 541 - 652
Target Start/End: Original strand, 23460944 - 23461055
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  23460944 ttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 23461043  T
Q  641 atattgatccct 652  Q
     ||||| |||||    
T  23461044 gtattggtccct 23461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 535 - 646
Target Start/End: Complemental strand, 29352738 - 29352627
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||| |||||||||||||||    
T  29352738 aaaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtctctgcactttgtaaaa 29352639  T
Q  635 atattgatattg 646  Q
    |||||| |||||    
T  29352638 atattggtattg 29352627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 535 - 730
Target Start/End: Complemental strand, 38443700 - 38443509
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||  ||||||| |||||||||||||||||||||| ||||||||| ||||        ||||||||||||||||||||||||||||||    
T  38443700 aaaggtttaaatatgcatttagtcattgcactttcatcagattttggtattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaa 38443602  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
    |||||| ||||| ||| |||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  38443601 atattggtattggtccttctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 38443509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 646
Target Start/End: Original strand, 3017254 - 3017360
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttc-atcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||        ||||| |||||||||||||||||||||||||||||    
T  3017254 ttaaatatgtctttagtccttgcactttcgatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatatt 3017353  T
Q  640 gatattg 646  Q
    | |||||    
T  3017354 ggtattg 3017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 536 - 652
Target Start/End: Complemental strand, 40393797 - 40393681
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||        ||||| ||||||||| |||||||||||||||    
T  40393797 aaggtttaaatatgtctttagtcctcgcacttttatcagattttggcattggtcccaacacttttttttgtttgaaattggtccatgcactttgtaaaaa 40393698  T
Q  636 tattgatattgatccct 652  Q
    ||||| ||||| |||||    
T  40393697 tattggtattggtccct 40393681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 51754307 - 51754183
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  51754307 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 51754208  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  51754207 gtattggtccctctgttaactttct 51754183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 606 - 813
Target Start/End: Complemental strand, 54090183 - 54089979
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccc 703  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||           |||||||||||| |||||||| ||||    
T  54090183 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactatt-ggtattgg-tccc 54090086  T
Q  704 tacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    | ||| |||||||||||||||||  || | || ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||| ||||||    
T  54090085 tgcac-tttgtaaaaatattggtggtggt-ccatgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtagcactc 54089990  T
Q  803 tgttgggtttt 813  Q
     ||||| ||||    
T  54089989 cgttggttttt 54089979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 652
Target Start/End: Original strand, 31705206 - 31705317
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| |||  ||||        ||||||||||||||||||||||||||||||||||||    
T  31705206 ttaaatatgcctttagtccttgcactttcatcagattttgacattgatccatacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 31705305  T
Q  641 atattgatccct 652  Q
     ||||| |||||    
T  31705306 gtattggtccct 31705317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 27957483 - 27957587
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  27957483 tgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaac 27957582  T
Q  661 tttct 665  Q
    |||||    
T  27957583 tttct 27957587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 38443320 - 38443444
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||||||||||| |||||||||||||||||||| |  |||        |||||| |||||||||||||||||||||||||||||    
T  38443320 ttaaatgtgtcattggtccttgcacttttatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 38443419  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  38443420 gtattggtccctctgttaactttct 38443444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 668
Target Start/End: Complemental strand, 44398271 - 44398159
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||||||||||||||||||||| ||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| |||||||     
T  44398271 gtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctg 44398172  T
Q  656 ttaactttctatt 668  Q
    |||||||||||||    
T  44398171 ttaactttctatt 44398159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 47358153 - 47358277
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  ||         |||||| |||||||||||||||||||||||||||||    
T  47358153 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcaattttttttgtttggcattggtccctgcactttgtaaaaatattg 47358252  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  47358253 gtattggtccctctgttaactttct 47358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 54803037 - 54803161
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||| ||||||||| ||| |||||||||| |||||||||||  |||        ||||||||||||||| ||||||||||||||||||||    
T  54803037 ttaaatatgcctttggtccttgcatttttatcagatttttgcattggtccctccacttttttttgtttggaattggtccatgcactttgtaaaaatattg 54803136  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  54803137 gtattggtccctctgttaactttct 54803161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 40393707 - 40393603
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  40393707 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 40393612  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  40393611 gttttgtgt 40393603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 16732328 - 16732206
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||||||||||||||||| || |||||||||||| |  |||        |||||| ||||||||||||||||| |||||||||||    
T  16732328 ttaaatgtgtcattggtccttgcactttcatcaaatgttggcattggtctctgcacttttttttgtttggcattggtccctgcactttataaaaatattg 16732229  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||||||||||| ||||||||    
T  16732228 gtattgatccctctgttaacttt 16732206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 710 - 807
Target Start/End: Original strand, 23461029 - 23461124
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttg 807  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||||    
T  23461029 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttg 23461124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 34682275 - 34682408
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgta 631  Q
    |||||| |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||          |||||| ||||||||||||||||||||    
T  34682275 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttttgtttggcattggtccctgcactttgta 34682374  T
Q  632 aaaatattgatattgatccctctattaactttct 665  Q
    ||||||||| ||||| ||||||| ||||||||||    
T  34682375 aaaatattggtattggtccctctgttaactttct 34682408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 535 - 665
Target Start/End: Complemental strand, 40037060 - 40036930
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||| |||||||| |||||||||||||||||  |||        |||||| |||||||||| ||||||||||||    
T  40037060 aaaggtttaaatgtgtcattggtccctgcattttcatcaaattttggcattggtccctgcacttttttttgtttggcattggtccctacactttgtaaaa 40036961  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||| ||||||||||    
T  40036960 atattggtattggtccctctgttaactttct 40036930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 730
Target Start/End: Complemental strand, 51437377 - 51437192
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||| | |||||||||||||  ||||||||||||||| || ||||        ||||||||||||||| ||||||||||||||||||||    
T  51437377 ttaaatatgtctttaattcttgcactttcattggattttggcattggttcctacacttttttttgtttggaattggtcc-tgcactttgtaaaaatattg 51437279  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||  ||||||| | |||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  51437278 gtattagtccctctgtgaactttctgttaagaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 51437192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 44398044 - 44398148
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  44398044 tttgtaaaaatattggtattagtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 44398139  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  44398140 gttttgtgt 44398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 51436995 - 51437125
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||||||| |||||||||||  |||||| ||  |||        |||||| |||||||||||||||||||||||    
T  51436995 aaaggtttaaatgtgtcattggtccctgcactttaatcagattttgatattggttcctgcacttttttttgtttggcattggtccctgcactttgtaaaa 51437094  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||||||| ||||||||||    
T  51437095 atattggtattggtccctctgttaactttct 51437125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 54090219 - 54090169
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54090219 ttaaatatgtctttagtccttgcactttcattagattttggcattggtccc 54090169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 535 - 665
Target Start/End: Complemental strand, 3017588 - 3017456
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaa 632  Q
    ||||| |||||| |||| || |||| |||| ||||||||||||||||||||||||||  |||          |||||| |||||| ||||||||||||||    
T  3017588 aaaggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcacttttttttttgtttggcattggttcctgcactttgtaa 3017489  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||| ||||||||||    
T  3017488 aaatattggtattggtccctctgttaactttct 3017456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 710 - 817
Target Start/End: Original strand, 3017340 - 3017444
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||| |||||||| ||| |    
T  3017340 tttgtaaaaatattggtattggtcac-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacatggcactccgtt-g 3017435  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  3017436 gttttgtgt 3017444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 11692504 - 11692444
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  11692504 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 11692444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 21560865 - 21560925
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  21560865 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 21560925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 29016041 - 29015981
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  29016041 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 29015981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 54803414 - 54803290
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||| |||||||||||| |||| ||||  |||        |||||| |||||||||||||||||||||||||||||    
T  54803414 ttaaatgtgtcattggtccctgcacttttatcagattttggtattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 54803315  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || |||| ||||||||||    
T  54803314 gtattggtctctctgttaactttct 54803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 763
Target Start/End: Original strand, 26920653 - 26920798
Alignment:
Q  613 ttggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacactttt 712  Q
    ||||||| |||||||||||||||||||| ||||| | ||||| |||||||||| ||          ||||||||||||| ||||||| |||| ||  |||    
T  26920653 ttggtccatgcactttgtaaaaatattggtattggttcctctgttaactttctgttaaaaaaat--acaaaactattgg-tattggt-ccctgcaacttt 26920748  T
Q  713 gtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  26920749 gtaaaaatattggtattggtcct-tgcactttgtaaaaatattggtattgg 26920798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 663
Target Start/End: Original strand, 29352427 - 29352530
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaa 659  Q
    |||||||||||||||||||||||||||||||  |||         |||||| |||||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  29352427 tgcactttcatcagattttggcattggtccctgcactttttttttgtttggtattggtccttgcactttgtaaaaatattggtattggtccctctgttaa 29352526  T
Q  660 cttt 663  Q
    ||||    
T  29352527 cttt 29352530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 38443555 - 38443456
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  38443555 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 38443460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 2563930 - 2563988
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  2563930 tgagcttaactcagttgataaaaataatgaataatatatgtaaggttcgaggttcaaac 2563988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 21441333 - 21441223
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatattgatattgatccctct 654  Q
    |||| |||||||||||||||||||||||||||||||  |||         |||||| |||||||||| |||||||||||||||||| ||||  |||||||    
T  21441333 gtccctgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctacactttgtaaaaatattggtatttgtccctct 21441234  T
Q  655 attaactttct 665  Q
     ||||||||||    
T  21441233 gttaactttct 21441223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 541 - 663
Target Start/End: Original strand, 35565045 - 35565166
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| | |||||||||||||||||||||||||||||  ||         ||| || |||||||||||||||||||||||||||||    
T  35565045 ttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcatttttttttgtt-ggcattggtccctgcactttgtaaaaatattg 35565143  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||| ||||||||    
T  35565144 gtattggtccctctgttaacttt 35565166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 715 - 808
Target Start/End: Complemental strand, 49665564 - 49665473
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  49665564 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 49665473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 533 - 659
Target Start/End: Complemental strand, 52836972 - 52836847
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| ||||||||| ||||||||||| |||||| ||||||||||| ||||||| || |||         ||||| |||||||| |||||||||||||    
T  52836972 ataaaggtttaaatatgcctttagtccttacacttttatcagattttgacattggttcctaca-ttttttttgtttgaaattggtctctgcactttgtaa 52836874  T
Q  633 aaatattgatattgatccctctattaa 659  Q
    |||||||| ||||| ||| ||| ||||    
T  52836873 aaatattggtattggtccatctgttaa 52836847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 534 - 663
Target Start/End: Original strand, 54089836 - 54089966
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttg-taa 632  Q
    |||||| |||||| |||| || ||||  ||||||| ||||||||||||||||| ||||  |||        |||||| |||||||||||||||||| |||    
T  54089836 taaaggtttaaatgtgtcattggtccccgcacttttatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgttaa 54089935  T
Q  633 aaatattgatattgatccctctattaacttt 663  Q
    |||||||| ||||| ||||||| ||||||||    
T  54089936 aaatattggtattggtccctctgttaacttt 54089966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 31705291 - 31705343
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  31705291 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatattgg 31705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 51760864 - 51760917
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  51760864 attggtccctgcactttgtaaaaatattggtattgatccatctgttaactttct 51760917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 16222887 - 16222763
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| | |||||||||||||||||||||||||||||  |||        |||||| | |||||| || |||||| ||||||||||    
T  16222887 ttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcacttttttctgtttggcactggtccatgtactttgaaaaaatattg 16222788  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  16222787 gtattggtccctctgttaactttct 16222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 607 - 663
Target Start/End: Original strand, 35565251 - 35565307
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  35565251 ttggtattggtccctgcactttgtaaaaatattggtattggtccctctgttaacttt 35565307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 817
Target Start/End: Complemental strand, 35565404 - 35565323
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  35565404 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 35565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 40791153 - 40791093
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||| ||||||||||| ||||| ||||||| ||||||||||    
T  40791153 gtttggcattggtccctgcactttataaaaatattggtattggtccctctgttaactttct 40791093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 47982429 - 47982489
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||    
T  47982429 gtttggcattggtccctacactttgtaaaaatattggtattggtccctctgttaactttct 47982489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 47991716 - 47991776
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||    
T  47991716 gtttggcattggtccctacactttgtaaaaatattggtattggtccctctgttaactttct 47991776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 48001003 - 48001063
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||    
T  48001003 gtttggcattggtccctacactttgtaaaaatattggtattggtccctctgttaactttct 48001063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 48010290 - 48010350
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||    
T  48010290 gtttggcattggtccctacactttgtaaaaatattggtattggtccctctgttaactttct 48010350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 55328848 - 55328725
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| ||||||| |||||||||||||||||||| ||||||||  | ||          ||||| ||||||| |||||||||||||||||||||    
T  55328848 ttaaatgtgtcattagtccctgcactttcatcagattttgacattggtcttg-catttttttttttttggcattggtctctgcactttgtaaaaatattg 55328750  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  55328749 gtattggtccctctgttaactttct 55328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 51437238 - 51437139
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||| || |||  || |||||||||||||| ||||||||||||| ||| ||||||    
T  51437238 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg-tgtcacg-tggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 51437143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 49665396 - 49665454
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||    
T  49665396 gtttggcattggtccctgcactttgtaaaaatattggtattggtccatctgttaacttt 49665454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 26050562 - 26050615
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||    
T  26050562 attggtcccttcactttgtaaaaatattggtattggtccctctgttaactttct 26050615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 29352647 - 29352544
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| || | |||||||||||||||||||| |||| |||||   | || |||||||||||| ||||||||||||||| ||| |    
T  29352647 tttgtaaaaatattggtattggtctc-tgcactttgtaaaaatattgctatt-ggtgc--acgtggcgtgaaatgattgggccacgtggcactccgtt-g 29352553  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  29352552 gttttgtgt 29352544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 23461041 - 23461080
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  23461041 ttggtattggtccctgcactttgtaaaaatattgatattg 23461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 31705303 - 31705342
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  31705303 ttggtattggtccctgcactttgtaaaaatattgatattg 31705342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 40393695 - 40393656
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  40393695 ttggtattggtccctgcactttgtaaaaatattgatattg 40393656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 761
Target Start/End: Original strand, 44398013 - 44398063
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatatt 761  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  44398013 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattggtatt 44398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 49665557 - 49665518
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  49665557 ttggtattggtccctgcactttgtaaaaatattgatattg 49665518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 612 - 663
Target Start/End: Original strand, 52836674 - 52836725
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||    
T  52836674 attggtccctgcactttgtaaaaatgttggtattggtccctctgttaacttt 52836725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 801
Target Start/End: Complemental strand, 52836837 - 52836753
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcact 801  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||| ||||||    
T  52836837 aaaactattgatattgatccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgcggcact 52836753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 44638674 - 44638624
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  44638674 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 44638624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 47040952 - 47040898
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaa 502  Q
    |||||| |||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  47040952 agcttagttcagttgatatgaacaatgcataatgtatgtaaggttcggggttcaa 47040898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 29791777 - 29791834
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    |||| |||| |||||||||| |||||||  ||||||||||||||||| ||||||||||    
T  29791777 tgagtttaactcagttgatagaaacaatacataatatatgtaaggtttgaggttcaaa 29791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 40393527 - 40393586
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||| ||||||||||||||||||||| ||||| | ||||| ||||||||||    
T  40393527 gtttggcattggtctctgcactttgtaaaaatattggtattggt-cctctgttaactttct 40393586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 41332759 - 41332719
Alignment:
Q  464 tataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  41332759 tataaacaatatataatatatgtaaggtttgaggttcaaac 41332719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 3017352 - 3017391
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  3017352 ttggtattggtcactgcactttgtaaaaatattgatattg 3017391  T

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Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 21441111 - 21441210
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||| |||  || ||| |||| |||||||||||| |||||||||| |||| ||| ||||||    
T  21441111 aaaattattggtattggtccc-tgcactttgtaaaaatattgaaatt-tgtacca-catggcgtgaaatgattgggccacgtggtactccgtt-ggtttt 21441206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 23461205 - 23461147
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||| || ||||||||||    
T  23461205 tttggcattggtccctgcacttagtaaaaatattggtattga-ccccctgttaactttct 23461147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 44398056 - 44398095
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  44398056 ttggtattagtccctgcactttgtaaaaatattgatattg 44398095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 47982602 - 47982503
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  || |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||| || ||| ||||||    
T  47982602 aaaactattggtattggtcct-tgtactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcattccgtt-ggtttt 47982507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 47991889 - 47991790
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  || |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||| || ||| ||||||    
T  47991889 aaaactattggtattggtcct-tgtactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcattccgtt-ggtttt 47991794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 48001176 - 48001077
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  || |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||| || ||| ||||||    
T  48001176 aaaactattggtattggtcct-tgtactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcattccgtt-ggtttt 48001081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 54803184 - 54803223
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  54803184 ttggtattggtccatgcactttgtaaaaatattgatattg 54803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 451 - 489
Target Start/End: Original strand, 4033426 - 4033464
Alignment:
Q  451 ttaattcagttgatataaacaatgtataatatatgtaag 489  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  4033426 ttaattcagttgatatgaacaatgcataatatatgtaag 4033464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 607 - 641
Target Start/End: Original strand, 21441118 - 21441152
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattga 641  Q
    |||| ||||||||||||||||||||||||||||||    
T  21441118 ttggtattggtccctgcactttgtaaaaatattga 21441152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 23461241 - 23461191
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| | |||||||||||||||||||||||||||||    
T  23461241 ttaaatgtgtcattggtccctacactttcatcagattttggcattggtccc 23461191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 447 - 505
Target Start/End: Complemental strand, 28430624 - 28430566
Alignment:
Q  447 gagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||||||||||| ||  ||||||| |||||||||| |||||  ||||||||||||    
T  28430624 gagcttaattcagttggtacgaacaatgcataatatatgcaaggtctgaggttcaaact 28430566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 458 - 504
Target Start/End: Original strand, 33634511 - 33634557
Alignment:
Q  458 agttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||||    
T  33634511 agttggtataaataatatataatatatgtaaggttcggggttcaaac 33634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 763
Target Start/End: Original strand, 35565246 - 35565291
Alignment:
Q  717 aaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||    
T  35565246 aaatattggtattggtccc-tgcactttgtaaaaatattggtattgg 35565291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 43499883 - 43499937
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||||||| || |||| |||| ||||||||||| || |||||||||    
T  43499883 cttaattcagttgatatcaataatgcataaaatatgtaaggtccgtggttcaaac 43499937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 607 - 645
Target Start/End: Original strand, 44398025 - 44398063
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatatt 645  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  44398025 ttggtattggtccctgcactttgtaaaaatattggtatt 44398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 740 - 817
Target Start/End: Complemental strand, 48010439 - 48010364
Alignment:
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||| || ||| ||||||||||    
T  48010439 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcattccgtt-ggttttgtgt 48010364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 52836825 - 52836791
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||||||||||||||||||||||||||||||    
T  52836825 attgatccctgcactttgtaaaaatattgatattg 52836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 31463494 - 31463543
Alignment:
Q  455 ttcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||| ||| |||| ||||||||||||||||  |||||||||||    
T  31463494 ttcagttgatagaaataatgcataatatatgtaaggtctgaggttcaaac 31463543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 508
Target Start/End: Complemental strand, 43630473 - 43630416
Alignment:
Q  451 ttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcg 508  Q
    |||| ||| ||| ||| ||||||| ||||||||||||||||| |||||||||| ||||    
T  43630473 ttaactcaattggtatgaacaatgcataatatatgtaaggtttgaggttcaaatttcg 43630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 53221958 - 53222007
Alignment:
Q  445 atgagcttaattcagttgatataaacaatgtataatatatgtaaggttcg 494  Q
    |||| ||||| ||||||||||   ||||||||||||||||||||||||||    
T  53221958 atgaacttaactcagttgataaggacaatgtataatatatgtaaggttcg 53222007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 53438733 - 53438692
Alignment:
Q  468 aacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    |||||||||||||||||||||| || ||| ||||||||||||    
T  53438733 aacaatgtataatatatgtaagatttgagtttcaaacttcga 53438692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 4e-56; HSPs: 112)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 543 - 817
Target Start/End: Complemental strand, 17965057 - 17964787
Alignment:
Q  543 aaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgat 642  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||| |    
T  17965057 aaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattggt 17964958  T
Q  643 attgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
    |||| |||||||||||||||||||||           |||||||||||| | ||||||| ||||||||||| |||||||||||||||||| |||| ||||    
T  17964957 attggtccctctattaactttctattaaaaaaaaaaacacaaaactattag-tattggt-ccctacacttt-gtaaaaatattggtattggtccc-tgca 17964862  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  17964861 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 17964787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 2268664 - 2268394
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||        ||||||||||| ||| ||||||||||||||||||||    
T  2268664 ttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattgatccttgcactttgtaaaaatattg 2268565  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
    |||||| |||||||||||||||||| ||         |||||||||||||  ||||||| |||| |||||| |||||||||||||||||| || | ||||    
T  2268564 atattggtccctctattaactttctgttaaaaaaaaacacaaaactattgt-tattggt-ccctgcacttt-gtaaaaatattggtattggtctc-tgca 2268469  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  2268468 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 2268394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 26409047 - 26408775
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  26409047 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 26408948  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||| ||| | ||           |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |     
T  26408947 gtattggtccctctattaattttttgttaaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tc 26408852  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  26408851 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 26408775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 533 - 808
Target Start/End: Complemental strand, 25945745 - 25945475
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||        ||||||||||||||| ||||||||||||    
T  25945745 ataaaggtttaaatacgcctttagtccttgcactttcatcagattttggcattggtccctatacttttttttgtttggaattggtccttgcactttgtaa 25945646  T
Q  633 aaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    |||||||| ||||| |||||||||||| ||||| ||         |||||||||||||| ||||| | |||| |||||| |||||||||||||||||| |    
T  25945645 aaatattggtattggtccctctattaaatttctgttaaaaaaaaacacaaaactattgg-tattgat-ccctgcacttt-gtaaaaatattggtattggt 25945549  T
Q  733 cccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||| ||||||||||||||||||||||||| ||||||| |  | |||||||||||| ||||||||||||||| |||||    
T  25945548 ccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgcggcgtgaaatgattgggccacgtggcactccgttgg 25945475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 541 - 789
Target Start/End: Original strand, 5214269 - 5214513
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  5214269 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 5214368  T
Q  641 atattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||||||||| ||           |||||||||||| |||||||| ||||| ||| |||||||||||||| |||||| | |||||    
T  5214369 gtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattcgtattggt-ccctg 5214464  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
     |||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  5214465 aactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgg 5214513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 18036222 - 18036495
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  18036222 ttaaaaatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 18036321  T
Q  641 atattgatccctctattaactttctatt---nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
     ||||| |||||||||||||||||| ||            |||||||||||| | |||||| ||||| ||| ||||||||||||||||||||| | ||||    
T  18036322 gtattggtccctctattaactttctgttaaaaaaaaaaaacacaaaactatt-gctattgg-tccctgcac-tttgtaaaaatattggtattggt-ccct 18036417  T
Q  738 gcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||| |||||||   || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  18036418 gcactttgtaaaaatattgatatt-ggtgcca-tgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 18036495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 38789952 - 38790221
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  38789952 ttaaatattcctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 38790051  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||| |  || ||||||||||||||||||||| |  ||||||    
T  38790052 gtattggtccctctattaactttctgtt-aaaaaaaacacaaaactatt-ggtattgg-tccgtgtac-tttgtaaaaatattggtattggt-tcctgca 38790146  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  38790147 ctttgtaaaaatattgatatt-ggtgcca-cgtgacgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 38790221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 8145082 - 8144820
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |         ||||||||||| |||||||| |||||||||||||||    
T  8145082 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctatatttttttttgtttggaattgatccctgcattttgtaaaaatattg 8144983  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||| | ||||| ||||||   |||||||||||||||| | |||||||    
T  8144982 gtattggtccctctattaactttctgtt-aaaaaaaacacaaaactatt-ggtattag-tccctgcactttgtaaaaaatattggtattggt-ccctgca 8144887  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  8144886 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 8144820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 541 - 818
Target Start/End: Original strand, 20166065 - 20166337
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||        |||||||||| |||| ||||||||||||||||||||    
T  20166065 ttaaatatgcctttagttcttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattagtccatgcactttgtaaaaatattg 20166164  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||  ||||||| |||||||||||||          |||||||||||||| ||||||| |||| |||||| |||||||||||| ||||| |||| |||    
T  20166165 gtattagtccctctgttaactttctattaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattgatattggtccc-tgc 20166260  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgtg 818  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |||||||||||    
T  20166261 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgtg 20166337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 535 - 789
Target Start/End: Complemental strand, 4621086 - 4620838
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||| ||||||||||||||    
T  4621086 aaaggtttaaatatgcttttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccatgcactttgtaaaa 4620987  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    |||||| ||||| ||| ||| |||||||||| ||         |||||||||||| |||||||| ||| | ||| ||||||||||||||||||||| | |    
T  4620986 atattggtattggtccatctgttaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccttgcac-tttgtaaaaatattggtattggt-c 4620891  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
    ||||||||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  4620890 cctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgg 4620838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 23910710 - 23910437
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||| |||||||||||    
T  23910710 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttataaaaatattg 23910611  T
Q  641 atattgatccctctattaactttctatt---nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
     ||| | |||||||||||||||| | ||            |||||||||||| |||||||| ||| | ||| ||||||||||||||||||||| | || |    
T  23910610 gtatcggtccctctattaactttttgttaaaaaaaaaaaacacaaaactatt-ggtattgg-tccatgcac-tttgtaaaaatattggtattggt-cctt 23910515  T
Q  738 gcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||| ||||||| | || |||||||||||| |||||| |||||||| ||| ||||||||||    
T  23910514 gcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacatggcactccgtt-ggttttgtgt 23910437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 11062345 - 11062475
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||    
T  11062345 aaaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 11062444  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| ||| ||||||||||||||    
T  11062445 atattggtattggtccatctattaactttct 11062475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 8343045 - 8343310
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||          |||||||||||||||||||||||||||||||||||    
T  8343045 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca--tttttttttttggaattggtccctgcactttgtaaaaatattg 8343142  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||| ||         |||  ||||||| |||||||||  ||| ||| |||||||||||||||| |||| | || ||||    
T  8343143 gtattggtccctctgttaactttctgttaaaaaaaaacac--aactatt-ggtattggt--cctgcac-tttgtaaaaatattggaattggt-ccttgca 8343235  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| |||| || | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  8343236 ctttgtaaaaatattgatatt-ggtgtca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 8343310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 541 - 730
Target Start/End: Original strand, 39412155 - 39412341
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  39412155 ttaaatatgtatttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 39412254  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  39412255 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 39412341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 536 - 789
Target Start/End: Original strand, 15440518 - 15440764
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||        ||||| |||| || |||||||||||||||||    
T  15440518 aaggtttaaatatgtatttagtccttgcacttttatcagattttggtattggtccctacacttttttttgtttgaaatttgttcctgcactttgtaaaaa 15440617  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| || || |||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| ||||    
T  15440618 tattggtattggtctctatattaactttctgttaaaaaaaa-cacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc 15440713  T
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg 789  Q
     ||||||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  15440714 -tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgg 15440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 612 - 817
Target Start/End: Complemental strand, 23592820 - 23592621
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttt 711  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||| ||         |||||||||||||| ||||||| |||| ||||||    
T  23592820 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt 23592723  T
Q  712 tgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggt 810  Q
     |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |||    
T  23592722 -gtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggt 23592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 535 - 763
Target Start/End: Complemental strand, 4717229 - 4717008
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||||||| |||    
T  4717229 aaaggcttaaatatgcctttagtccctgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctgcactttgtgaaa 4717130  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    |||||||||||| ||||||| |||||||| | ||         ||||||| |||| ||||||||  |||| ||| ||||||||||||||||||||| | |    
T  4717129 atattgatattggtccctctgttaactttatgtt--aaaaaaacacaaaagtatt-ggtattgg-accctgcac-tttgtaaaaatattggtattggt-c 4717036  T
Q  735 cctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||| |||||||||||||||||    
T  4717035 cctgcactttg-aaaaatattgatattgg 4717008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 807
Target Start/End: Complemental strand, 22619843 - 22619597
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         ||| |||||||||||||||||||||||||||||||    
T  22619843 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacactttttt---ttttgaattggtccctgcactttgtaaaaatattg 22619747  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| ||||                  |||||||||||| |||||||| ||||  ||| ||||||||||||||||||||| | |||||||    
T  22619746 gtattggtccctctgttaa------------aaaaaacacaaaactatt-ggtattgg-tcccagcac-tttgtaaaaatattggtattggt-ccctgca 22619663  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttg 807  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||||    
T  22619662 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttg 22619597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 18674258 - 18674136
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||    
T  18674258 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacttttttttttgtttggaattggtccctgcactttgtaaaaatattg 18674159  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| || |||||||||||||    
T  18674158 gtattggtctctctattaacttt 18674136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 556 - 807
Target Start/End: Complemental strand, 13198279 - 13198030
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatattgatattgatccctct 654  Q
    ||||||||||||||||||||||||||||||||||||  |||         |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  13198279 gtccttgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgtaaaaatattgatattggtccctct 13198180  T
Q  655 attaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaata 753  Q
    ||||||||||| ||          |||||||||||| |||||| ||||| | ||| ||||| ||||||||||||||| | |||||||||||||||||||     
T  13198179 attaactttctgttaaaaaaaaaacacaaaactatt-ggtatt-gttccttgcac-tttgtcaaaatattggtattggt-ccctgcactttgtaaaaatg 13198084  T
Q  754 ttgatattgggtgccaccatgccgtgaaatgattg--gccacgtggcactctgttg 807  Q
    || ||||| ||||||| | || | |||||||||||  |||||||||||||| ||||    
T  13198083 ttaatatt-ggtgcca-cgtggcatgaaatgattggtgccacgtggcactccgttg 13198030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 18705909 - 18705780
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||||||||||| |||||||||||||| ||||||| |||||||   | ||        |||||||||||||||||||||||||||||||    
T  18705909 aaggtttaaatatgtctttagtctttgcactttcatcaaattttggtattggtcgttatacttttttttgtttggaattggtccctgcactttgtaaaaa 18705810  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||    
T  18705809 tattggtattgatccctctattaactttct 18705780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 536 - 652
Target Start/End: Complemental strand, 38245156 - 38245040
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||        |||||||||||||||||||||||||||||||    
T  38245156 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactttgtaaaaa 38245057  T
Q  636 tattgatattgatccct 652  Q
    ||||| ||||| |||||    
T  38245056 tattggtattggtccct 38245040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 34929541 - 34929663
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||          |||||||||||||||||||||||| ||||||||||    
T  34929541 ttaaatatgtctttagtccttgcactttcatcagattttgacattgatccctacatttttttt--tttggaattggtccctgcactttgcaaaaatattg 34929638  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  34929639 gtattggtccctctattaactttct 34929663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 3578002 - 3578127
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngt-ttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||         | ||||||||||||||| |||||||||||||||||    
T  3578002 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttttattggaattggtccctccactttgtaaaaatatt 3578101  T
Q  640 gatattgatccctctattaactttct 665  Q
    | || || ||||||| ||||||||||    
T  3578102 ggtactggtccctctcttaactttct 3578127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 23910293 - 23910422
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||||||||||| |||||||||| ||||        |||||| ||||||||||||||||||||||||    
T  23910293 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggcattggtccctgcactttgtaaaaa 23910392  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  23910393 tattggtattggtccctctgttaactttct 23910422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 561 - 665
Target Start/End: Complemental strand, 16969075 - 16968971
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  16969075 tgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattgatccctctgttaac 16968976  T
Q  661 tttct 665  Q
    |||||    
T  16968975 tttct 16968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 18705526 - 18705650
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  18705526 ttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 18705625  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||| ||||||||||    
T  18705626 gtattgatccctctgttaactttct 18705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 20166476 - 20166352
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  20166476 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 20166377  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  20166376 gtattggtccctctgttaactttct 20166352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 26408640 - 26408764
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  26408640 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 26408739  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  26408740 gtattggtccctctgttaactttct 26408764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 31913059 - 31912936
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||| | |||         ||||||||||||||| ||||||||||||||||||||    
T  31913059 ttaaatatgcctttagtccttgcacttttatcagattttagcattggtctctaca-ttttttttgtttggaattggtccatgcactttgtaaaaatattg 31912961  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  31912960 gtattggtccctctattaactttct 31912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 9177269 - 9177147
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||| |||||||| | ||||||||||||| ||||||||||||||||| ||||        ||||||||||||||||| |||||||||||||||||     
T  9177269 ttaaatatatctttagttcctgcactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctccactttgtaaaaatattt 9177170  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||| ||||||||    
T  9177169 gtattggtccctctgttaacttt 9177147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 27858385 - 27858515
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        ||| || |||||||||||||||||||||||    
T  27858385 aaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgttaggcattggtccctgcactttgtaaaa 27858484  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||| || |||||||||||||||    
T  27858485 atattggtattggtctctctattaactttct 27858515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 541 - 802
Target Start/End: Complemental strand, 974236 - 973981
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttgg-aattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||          |||   ||||||||  || ||||||||||||||||    
T  974236 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccctacattttttttttttttttaattggtc--tgtactttgtaaaaatatt 974139  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    | ||||||||||||| ||||| |||| ||          ||| ||||||||| | ||||| |||| |||||| ||||||||| |||||||| |||  |||    
T  974138 ggtattgatccctctgttaaccttctgttaaaaaaaaaaacacaactattggtt-ttggt-ccctgcacttt-gtaaaaataatggtattggtcca-tgc 974043  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  974042 actttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggccacgtggcactc 973981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 556 - 665
Target Start/End: Original strand, 25945347 - 25945456
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| |||||||     
T  25945347 gtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctg 25945446  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  25945447 ttaactttct 25945456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 802
Target Start/End: Complemental strand, 5907653 - 5907413
Alignment:
Q  557 tccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctat 656  Q
    |||||||||||| |||| ||||||||||||||||| |||         ||||  ||||||||| |||| ||||||||||||||| |||||||| |||| |    
T  5907653 tccttgcacttttatcaaattttggcattggtccctaca-ttttttttgtttaaaattggtccttgcattttgtaaaaatattggtattgatctctctgt 5907555  T
Q  657 taactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatatt 755  Q
    ||||||||| ||          |||||||||||||| ||||||| | || |||||| |||||||||||||||||| |||| |||| ||||||||||||||    
T  5907554 taactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ctctgcacttt-gtaaaaatattggtattggtccc-tgcattttgtaaaaatatt 5907459  T
Q  756 gatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||| ||||||| | || |||||||||||| |||||||||||||||    
T  5907458 gatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 5907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 30491890 - 30492024
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac----nnnnnnnngtttggaattggtccctgcactttgt 630  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||            |||| |||||| || |||||||||||    
T  30491890 aaaggtttaaatatgtctttagtccttgcacttttatcagatttttgcattggtccctacacttttttttttttgtttagaattgatctctgcactttgt 30491989  T
Q  631 aaaaatattgatattgatccctctattaactttct 665  Q
    |||||||||| ||||| | ||||||||||||||||    
T  30491990 aaaaatattggtattggttcctctattaactttct 30492024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 39412534 - 39412405
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| ||| ||||||| ||||||||||||    
T  39412534 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcatttgtccctgtactttgtaaaaa 39412435  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  39412434 tattggtattggtccctctgttaactttct 39412405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 5907258 - 5907386
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||| |||||||||||||||||  |||        |||||| ||||||||||||||||||||||||    
T  5907258 aaggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaaaa 5907356  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| ||||||| ||||||||||    
T  5907357 tattggtattggtccctctgttaactttct 5907386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 8144696 - 8144800
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||| ||||||||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  8144696 tgcacttttatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaac 8144795  T
Q  661 tttct 665  Q
    |||||    
T  8144796 tttct 8144800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 15443029 - 15442905
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||||||||   |||        |||||| |||||||||||||||||||||||||||||    
T  15443029 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 15442930  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||| ||| ||||||||||    
T  15442929 gtattggtccttctgttaactttct 15442905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 533 - 665
Target Start/End: Original strand, 16968709 - 16968841
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||||||  ||||||| || |||||| ||||||||||| |||||||||| ||||        ||||||||||||||||| |||||| |||    
T  16968709 ataaaggtttaaatatgcttttagtctttacacttttatcagattttgacattggtccctacacttttttttgtttggaattggtcccttcactttataa 16968808  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| | | ||||||||||||||    
T  16968809 aaatattggtattggttcttctattaactttct 16968841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 22619470 - 22619574
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    |||||||||||||||||||||||||| ||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  22619470 tgcactttcatcagattttggcattgttccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaac 22619569  T
Q  661 tttct 665  Q
    |||||    
T  22619570 tttct 22619574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 23592483 - 23592607
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||  |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  23592483 ttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 23592582  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  23592583 gtattggtccctctgttaactttct 23592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 38245066 - 38244962
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||  |||||||||||| ||||||||||||||| ||| |    
T  38245066 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cattgcgtgaaatgattgggccacgtggcactccgtt-g 38244971  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  38244970 gttttgtgt 38244962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 605 - 802
Target Start/End: Complemental strand, 13667714 - 13667522
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccct 704  Q
    ||||||| ||||||||| |||||||| ||||||||||||||| ||||||| |||| ||||| ||         ||||||||||||||  ||| || | ||    
T  13667714 gtttggagttggtccctacactttgtgaaaatattgatattggtccctctgttaattttctgttaaaaaaaaacacaaaactattggc-attagt-ctct 13667617  T
Q  705 acacttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
     |||||| |||||||||||||||||| | |  ||||||||||||||||||||||||| ||| ||| | ||||||||||||||| |||||||||||||||    
T  13667616 gcacttt-gtaaaaatattggtattggttca-tgcactttgtaaaaatattgatatt-ggtacca-cgtgccgtgaaatgattgggccacgtggcactc 13667522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 659
Target Start/End: Complemental strand, 8343439 - 8343321
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||| ||  |||        |||||| |||||||||||||||||||||||||||||    
T  8343439 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 8343340  T
Q  641 atattgatccctctattaa 659  Q
     ||||| ||||||| ||||    
T  8343339 gtattggtccctctgttaa 8343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 2033741 - 2033960
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgaca-cnnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |||           ||| |||||||| |||||||||||||||||||||    
T  2033741 ttaaatatgcctttagtccttgcactttcatcagattttggcattggttcctacatttttttttctttttgaattggt-cctgcactttgtaaaaatatt 2033839  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| |||||||||||| ||| | ||          ||||||| |||| || ||||| ||| | ||| ||||||||||||||||||||| | |||||    
T  2033840 ggtattggtccctctattaattttatgttaaaaaaaacacacaaaattatt-ggcattgg-tccttgcac-tttgtaaaaatattggtattggt-ccctg 2033935  T
Q  739 cactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||| |||||||    
T  2033936 cactttgtaaaaatattaatattgg 2033960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 4716821 - 4716945
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| | ||||||||||||| ||||| |||||||||  |||        |||||| |||||||| || |||||||||||||||||    
T  4716821 ttaaatgtgtcattggtcccttcactttcatcagaatttggtattggtccctgcacttttttttgtttggcattggtccatgtactttgtaaaaatattg 4716920  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||||||||||||||||||||||    
T  4716921 gtattgatccctctattaactttct 4716945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 11062728 - 11062604
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||| ||||| || |||| ||||||||||||||||||||| |||||||||  |||         ||||| ||||||||||||||||||||||||||||     
T  11062728 ttaaacatgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttctttggcattggtccctgcactttgtaaaaatatta 11062629  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  11062628 gtattggtccctctgttaactttct 11062604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 17964672 - 17964776
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    ||||||||||||||||||| |||||||||||  |||        |||||| |||||||||||||||||||| |||||||| ||||| ||||||| |||||    
T  17964672 tgcactttcatcagatttttgcattggtccctgcacttttttttgtttggcattggtccctgcactttgtataaatattggtattggtccctctgttaac 17964771  T
Q  661 tttct 665  Q
    |||||    
T  17964772 tttct 17964776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 612 - 806
Target Start/End: Complemental strand, 21747999 - 21747811
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttt 711  Q
    |||||| |||||||||||||||||||||| ||||| ||| ||| |||||||||| ||         |||||||||||| |||||| | ||||| ||| ||    
T  21747999 attggttcctgcactttgtaaaaatattggtattggtccatctcttaactttctgtt-aaaaaaaacacaaaactatt-ggtattag-tccctgcac-tt 21747904  T
Q  712 tgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    |||||||||||| |||||||| || |||||||| |||||||||||||||| | ||||| | ||  ||||||||||| |||||||||||||||||||    
T  21747903 tgtaaaaatattagtattgat-ccttgcactttataaaaatattgatatt-gatgcca-cgtggtgtgaaatgattgggccacgtggcactctgtt 21747811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 973829 - 973954
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| ||||||||||||| |||||||||||||||||  |||         |||||| ||||||||||||||||||||||||||||    
T  973829 ttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgtaaaaatatt 973928  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| |||||||  |||||||||    
T  973929 ggtattggtccctctgctaactttct 973954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 31912701 - 31912830
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| |||| || |  ||         |||||| ||||||||||||||||||||||||    
T  31912701 aaggtttaaatatgtctttgatccttgcactttcatcagattttggtattgatctctgcatttttttttgtttggcattggtccctgcactttgtaaaaa 31912800  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| | | ||| ||||||||||    
T  31912801 tattggtattggttcttctgttaactttct 31912830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 32792361 - 32792490
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||| |||| ||||||||||||||| |  |||        |||||| ||||||||||||||||||||||||    
T  32792361 aaggtttaaatgtgtcattggtccctgcacttttatcaaattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 32792460  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| || |||| ||||||||||    
T  32792461 tattggtattggtctctctgttaactttct 32792490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 18705763 - 18705664
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  18705763 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattaggccacgtggcactccgtt-ggtttt 18705668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 710 - 800
Target Start/End: Complemental strand, 27858633 - 27858545
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcac 800  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||    
T  27858633 tttgtaaaaatattggtattggtccc-tgcattttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcac 27858545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 39412295 - 39412394
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  39412295 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 39412390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 628
Target Start/End: Original strand, 2268224 - 2268317
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcacttt 628  Q
    ||||| |||||| |||| ||||||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||    
T  2268224 aaaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 2268317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 5214605 - 5214552
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  5214605 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 5214552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 38790288 - 38790235
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  38790288 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 38790235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 561 - 665
Target Start/End: Original strand, 3023420 - 3023521
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    ||||||||||||||||||||| |||||||||  |||         ||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||||    
T  3023420 tgcactttcatcagattttggtattggtccctgcactttttt---tttggcattggtccctgtactttgtaaaaatattggtattgatcactctgttaac 3023516  T
Q  661 tttct 665  Q
    |||||    
T  3023517 tttct 3023521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 817
Target Start/End: Complemental strand, 18674102 - 18674021
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  18674102 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 18674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 32792675 - 32792615
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  32792675 gtttggaattgatccctgcattttgtaaaaatattggtattggttcctctattaactttct 32792615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 38244890 - 38244950
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||| |||||    
T  38244890 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaaatttct 38244950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 11062491 - 11062590
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  11062491 aaaattattggtattggtcca-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 11062586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 13197948 - 13198007
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  13197948 tttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttct 13198007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 801
Target Start/End: Original strand, 16968856 - 16968940
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcact 801  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||  | || |||||||||||| ||||||||||||||    
T  16968856 aaaactattggtattgatccc-tgcactttgtaaaaatattgatatt-ggtgcc-gcgtggcgtgaaatgattgggccacgtggcact 16968940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 668
Target Start/End: Complemental strand, 18036568 - 18036505
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctatt 668  Q
    |||||| |||||||||| |||||||||||||||||| ||||| || |||| |||||||||||||    
T  18036568 gtttggcattggtccctacactttgtaaaaatattggtattggtctctctgttaactttctatt 18036505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 734 - 808
Target Start/End: Original strand, 30492057 - 30492130
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattg-gccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||||||| ||||||| | || ||||||||||||| |||||||||||||| |||||    
T  30492057 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgagccacgtggcactccgttgg 30492130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 9176961 - 9177059
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| |||| |||||||||||||||||||||||    
T  9176961 ttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttgtttttgtttggcattgatccctgcactttgtaaaaatatt 9177059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 27858717 - 27858607
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||| |||||||||||||||| |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  27858717 ttaaatgtgtcattggtccctgcattttcatcagattttggtattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaaaatattg 27858619  T
Q  641 atattgatccct 652  Q
     ||||| |||||    
T  27858618 gtattggtccct 27858607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 802
Target Start/End: Original strand, 5950522 - 5950712
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctac 706  Q
    |||| |||||||||| |||||| ||||||||||| ||| | ||||||| |||||||||| ||         ||||||||||||  ||||||| ||||| |    
T  5950522 ttggcattggtccctacactttataaaaatattggtatcggtccctctgttaactttctgttaaaaaaatacacaaaactatt-agtattgg-tccctgc 5950619  T
Q  707 acttttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    || ||||||||  ||||||||||| | || |||||||||||||| ||||| |||| ||||||| | || ||||| |||||| |||||||||||||||    
T  5950620 ac-tttgtaaagttattggtattggt-ccatgcactttgtaaaactattggtatt-ggtgcca-cgtggcgtgagatgattaggccacgtggcactc 5950712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 663
Target Start/End: Complemental strand, 30492213 - 30492156
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    ||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||    
T  30492213 tttggcattggtccctacactttgtaaaaatattggtattggtccctctgttaacttt 30492156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 2268323 - 2268383
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||| | | ||||||||||    
T  2268323 gtttggcattggtccctgcactttgtaaaaatattggtattggtccatttgttaactttct 2268383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 806
Target Start/End: Original strand, 3578144 - 3578233
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    |||| ||||||||||| |||| |||||||||||||||||||| |||| ||||||| | || |||||||||||| || ||||||||||||||||    
T  3578144 aaaactattggtattggtccc-tgcactttgtaaaaatattggtatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactctgtt 3578233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 18674113 - 18674074
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18674113 ttggcattggtccctgcactttgtaaaaatattgatattg 18674074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 18705756 - 18705717
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18705756 ttggtattggtccctgcactttgtaaaaatattgatattg 18705717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 23592713 - 23592674
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  23592713 ttggtattggtccctgcactttgtaaaaatattgatattg 23592674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 32792592 - 32792553
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32792592 ttggtattggtccctgcactttgtaaaaatattgatattg 32792553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 446 - 505
Target Start/End: Complemental strand, 37791223 - 37791164
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||| |||||||| || |||||| | |||||||||| |||||||||||||||||||    
T  37791223 tgagcttagttcagttggtagaaacaacgcataatatatgcaaggttcgaggttcaaact 37791164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 38245054 - 38245015
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38245054 ttggtattggtccctgcactttgtaaaaatattgatattg 38245015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 659
Target Start/End: Complemental strand, 3578304 - 3578250
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaa 659  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||    
T  3578304 gtttggcattggtccctgcactttgtaaaaatattggtattggtctctctgttaa 3578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 13197908 - 13197962
Alignment:
Q  537 aggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||| ||||    
T  13197908 aggattaaatgtgtcattggtccatgcactttcatcagattttggcattgatccc 13197962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 29695020 - 29695074
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||| |||||||||||  |||||| ||||||||||||||||||| |||||||||    
T  29695020 cttaactcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaac 29695074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 30492051 - 30492085
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  30492051 attggtccctgcactttgtaaaaatattgatattg 30492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 31912908 - 31912874
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  31912908 attggtccctgcactttgtaaaaatattgatattg 31912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 18673949 - 18674006
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    ||||| ||| ||||||||||||||||||||||||| ||||| | ||||| ||||||||    
T  18673949 tttggcattcgtccctgcactttgtaaaaatattggtattggttcctctgttaacttt 18674006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 23592744 - 23592699
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  23592744 ttggtattggtccctgcactttgtaaaaatattggtattggtccct 23592699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 24443155 - 24443114
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  24443155 cttaattcagttgatataaacaatgcataatatatataaggt 24443114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 469 - 509
Target Start/End: Original strand, 3052303 - 3052343
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  3052303 acaatgtataatatatgcaaggttcgaggttcaaacctcga 3052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 763
Target Start/End: Complemental strand, 32792599 - 32792552
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  32792599 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg 32792552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 3578151 - 3578190
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  3578151 ttggtattggtccctgcactttgtaaaaatattggtattg 3578190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 11062498 - 11062537
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  11062498 ttggtattggtccatgcactttgtaaaaatattgatattg 11062537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 16968863 - 16968902
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  16968863 ttggtattgatccctgcactttgtaaaaatattgatattg 16968902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 22394036 - 22394095
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||  |||||||||||  |||||| |||||||||||||| | |||||||||||||    
T  22394036 tgagcttagctcagttgatatggacaatgcataatatatgtaagatccgaggttcaaact 22394095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 27858621 - 27858582
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  27858621 ttggtattggtccctgcattttgtaaaaatattgatattg 27858582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 30488926 - 30488985
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    |||||||| |||||||||||| ||||||| |||||||||  |||||| | ||||||||||    
T  30488926 tgagcttagttcagttgatatgaacaatgcataatatatacaaggtttggggttcaaact 30488985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 689552 - 689606
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||| |||||||||||  ||||||||||||||||||||| || || ||||||||    
T  689552 cttaactcagttgatatggacaatgtataatatatgtaagatttgatgttcaaac 689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 1538868 - 1538810
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||| ||| ||||||||| | |||||||||| ||||| ||||||||||||    
T  1538868 tgagcttaactcaattggtataaacaacgcataatatatgcaaggtccgaggttcaaac 1538810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 733 - 763
Target Start/End: Complemental strand, 3023619 - 3023589
Alignment:
Q  733 cccctgcactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||||||||||    
T  3023619 cccctgcactttgtaaaaatattgatattgg 3023589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 3023624 - 3023590
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||| |||||||||||||||||||||||||||||    
T  3023624 attggcccctgcactttgtaaaaatattgatattg 3023590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 4620756 - 4620790
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||||| |||||||||||||||||||||||||||    
T  4620756 attggtcgctgcactttgtaaaaatattgatattg 4620790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 591
Target Start/End: Complemental strand, 5214647 - 5214597
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  5214647 ttaaatgtgtcattggtccatgcactttcatcagattttgacattggtccc 5214597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 18431060 - 18430998
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcg 508  Q
    ||||||||| |||||| ||||  ||||||||||||||||||||  | | ||||||||||||||    
T  18431060 tgagcttaactcagttaatatggacaatgtataatatatgtaaaatccaaggttcaaacttcg 18430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 29962359 - 29962405
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggtt 492  Q
    ||||||||  |||||||||| ||||||||||||||||||| ||||||    
T  29962359 tgagcttagctcagttgatagaaacaatgtataatatatgcaaggtt 29962405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 30012439 - 30012393
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggtt 492  Q
    ||||||||  |||||||||| ||||||||||||||||||| ||||||    
T  30012439 tgagcttagctcagttgatagaaacaatgtataatatatgcaaggtt 30012393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 37614487 - 37614425
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcg 508  Q
    ||||||||  ||||||| || | |||| | |||||||||| ||||||||||||||||||||||    
T  37614487 tgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaacttcg 37614425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 2034079 - 2034026
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||| |||||| ||||||||||||||||| ||||| ||||||  ||||||||||    
T  2034079 attgatccctgtactttgtaaaaatattggtattggtccctcagttaactttct 2034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 12159459 - 12159414
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttc 493  Q
    ||||||| ||||||| || | |||||||||||||||||||||||||    
T  12159459 agcttaactcagttggtagagacaatgtataatatatgtaaggttc 12159414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 505
Target Start/End: Original strand, 29904452 - 29904481
Alignment:
Q  476 ataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||||||||||||||||||||||||    
T  29904452 ataatatatgtaaggttcgaggttcaaact 29904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #111
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 763
Target Start/End: Complemental strand, 31912902 - 31912873
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||||||||    
T  31912902 ccctgcactttgtaaaaatattgatattgg 31912873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #112
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 491
Target Start/End: Original strand, 42515808 - 42515853
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||||||||||| |||  |||||| ||||||||||||||||    
T  42515808 tgagcttaattcagttggtatggacaatgcataatatatgtaaggt 42515853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 111; Significance: 1e-55; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 14535 - 14265
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  14535 ttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 14436  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||||| ||||||| |||| |||||| |||||| ||||||||||| |||| ||||    
T  14435 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaagtattggtattggtccc-tgca 14340  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  14339 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 14265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 14128 - 14252
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  14128 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 14227  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  14228 gtattggtccctctgttaactttct 14252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 6437 - 6169
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  6437 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaatattg 6339  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| |          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| | || ||||    
T  6338 gtattggtccctctattaactttctgt-aaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggttcc-tgca 6244  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  6243 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 6169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 536 - 661
Target Start/End: Original strand, 6028 - 6152
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||  ||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  6028 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctacacttttttt-gtttggaattggtccctgcactttgtaaaaa 6126  T
Q  636 tattgatattgatccctctattaact 661  Q
    ||||| ||||| ||||||| ||||||    
T  6127 tattggtattggtccctctgttaact 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 109)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 18707938 - 18707662
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||        ||||||||||| ||| |||||||||||||||    
T  18707938 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtctctacacttttttttgtttggaattgatccttgcactttgtaaaaa 18707839  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    ||||| ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||    
T  18707838 tattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtcc 18707742  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    | ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  18707741 c-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 18707662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 541 - 802
Target Start/End: Original strand, 32503982 - 32504240
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||||||||||    
T  32503982 ttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 32504081  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| ||    
T  32504082 ggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tg 32504177  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  32504178 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 32504240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 535 - 817
Target Start/End: Complemental strand, 970854 - 970578
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||    
T  970854 aaaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaa 970755  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    |||||| ||||| |||||||||||||||||| ||         |||||||||||| |||||||| |||||  || |||||||||||||||||||| |  |    
T  970754 atattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgaac-tttgtaaaaatattggtatt-agtc 970659  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||| ||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  970658 cctgcacttcgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 33850864 - 33850594
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||        ||||||||||||||||||||||||||||||||||||    
T  33850864 ttaaatatgcatttagtccttgcactttcatcagattttggcattggcccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 33850765  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||||| |||||  || |||||||||||||||||||| |  |||||||    
T  33850764 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgaac-tttgtaaaaatattggtatt-agtccctgca 33850669  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||| ||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  33850668 cttcgtaaaaatattgatatt-ggtgcca-cgtgtcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 33850594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 533 - 763
Target Start/End: Complemental strand, 11108825 - 11108599
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||        |||| |||||||||||||||||||||||    
T  11108825 ataaaggcttaaatatatctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttagaattggtccctgcactttgtaa 11108726  T
Q  633 aaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    |||||||| ||||| ||||||| |||||||||| ||         |||||||||||| |||||| | ||||| ||| |||||||||||||| ||||||||    
T  11108725 aaatattggtattggtccctctcttaactttctgttaaaaaaaaacacaaaactatt-ggtattag-tccctgcac-tttgtaaaaatattagtattgat 11108629  T
Q  733 cccctgcactttgtaaaaatattgatattgg 763  Q
     ||||||||||||||||||||||||||||||    
T  11108628 -ccctgcactttgtaaaaatattgatattgg 11108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 2098295 - 2098566
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||| ||||||||| || ||||||||||||||| |||||||||| ||||        |||||| |||||||| ||||||||||||||||||||    
T  2098295 ttaaatatgtcattagtccttacattttcatcagattttgacattggtccctacactttcttttgtttggtattggtccatgcactttgtaaaaatattg 2098394  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     |||||||| ||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||| |||    
T  2098395 gtattgatctctctattaactttctcttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tgc 2098490  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||| |||||| || || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  2098491 actttgtaaaaatattgatatt-ggtgcc-ccgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 2098566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 14102575 - 14102847
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  14102575 ttaaatatgtctttagtcctcgaacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 14102674  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| ||||||| |||||||||| ||           ||||||| | |||| ||||||| |||| |||||| |||||||||||||||||| |||| ||    
T  14102675 gtattggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgttgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtccc-tg 14102770  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||| || ||||||||||    
T  14102771 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactctatt-ggttttgtgt 14102847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 541 - 756
Target Start/End: Complemental strand, 3952324 - 3952111
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||        ||||| ||||||||||||||||||||||||||||||    
T  3952324 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 3952225  T
Q  641 atattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     |||||||||||||||||||||||| ||           || ||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||    
T  3952224 gtattgatccctctattaactttctgttaaaaaaaaaaacagaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctg 3952129  T
Q  739 cactttgtaaaaatattg 756  Q
    ||||||||||||||||||    
T  3952128 cactttgtaaaaatattg 3952111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 536 - 763
Target Start/End: Complemental strand, 32928129 - 32927904
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  32928129 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 32928030  T
Q  636 tattgatattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatc 733  Q
    ||||| ||||| ||||||| |||||||||| ||           ||||||| | || |||||||| ||||| ||| ||||||||||||||||||||| |     
T  32928029 tattggtattggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgtt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt- 32927934  T
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||| ||||||    
T  32927933 ccctgcactttgtaaaaatattggtattgg 32927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 18906927 - 18907146
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||||| ||||||||||||||||||    
T  18906927 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaatattg 18907026  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| ||||||| |||||||||| ||          |||||||||||| |||||||| ||||| ||| ||||||||| ||||||||||| | ||||||    
T  18907027 gtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaattattggtattggt-ccctgc 18907122  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    ||||||||||| ||||| ||||||    
T  18907123 actttgtaaaactattggtattgg 18907146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 533 - 762
Target Start/End: Complemental strand, 4903016 - 4902790
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        ||||||||||||||||||||||||||||    
T  4903016 ataaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggaattggtccctgcactttgtaa 4902917  T
Q  633 aaatattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattga 731  Q
    |||||| | ||||| ||||||| |||||||||| ||          |||||||||||||| ||||||| |||| |||||| ||||||||||||||||||     
T  4902916 aaatatcggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattgg 4902820  T
Q  732 tcccctgcactttgtaaaaatattgatattg 762  Q
    |||| ||||||||||||||||||||||||||    
T  4902819 tccc-tgcactttgtaaaaatattgatattg 4902790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 541 - 754
Target Start/End: Complemental strand, 9777382 - 9777171
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  9777382 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 9777283  T
Q  641 atattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||| ||| | ||          |||||||||||| |||||||| ||||| ||||||   |||||||||||||||||| | || |    
T  9777282 gtattgctccctctattaattttatgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcactttgtaaaaaatattggtattgat-ctctac 9777186  T
Q  740 actttgtaaaaatat 754  Q
    |||||||||||||||    
T  9777185 actttgtaaaaatat 9777171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 546 - 763
Target Start/End: Original strand, 32653822 - 32654037
Alignment:
Q  546 tatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatatt 645  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||| ||||    
T  32653822 tatgcctttcgtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattggtatt 32653921  T
Q  646 gatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgcactt 743  Q
    | ||||||| |||||||||| ||           ||||||| | || |||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||    
T  32653922 ggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgtt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgcactt 32654017  T
Q  744 tgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||    
T  32654018 tgtaaaaatattgatattgg 32654037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 4831116 - 4831390
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn---gtttggaattggtccctgcactttgtaaaaata 637  Q
    ||||| |||||||||||||||||||||||||||| |||||  ||||||||| ||||           ||||||| |||||||||||||||||||||||||    
T  4831116 ttaaacatgtctttagtccttgcactttcatcaggttttgatattggtccctacactttttttttttgtttggagttggtccctgcactttgtaaaaata 4831215  T
Q  638 ttgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccc 736  Q
    ||| ||||| |||||||||||||||||| ||          ||||||| |||||| ||||| | |||| |||||| |||||||||||||||||| ||||     
T  4831216 ttggtattggtccctctattaactttctgttaacaaaaaaacacaaaattattgg-tattgat-ccctgcacttt-gtaaaaatattggtattggtccc- 4831311  T
Q  737 tgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  4831312 tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 4831390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 42813878 - 42814143
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||         |||||||||||||||| ||||||||||||||||||    
T  42813878 ttaaatatgtttttagtccttgcactttcatcagattttgacattggtccctacactttttttttgtttggaattggtcccagcactttgtaaaaatatt 42813977  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| |||||||||||||||||| ||           | ||||||||| |||||||| ||||| ||| ||||||||||||| ||||||| | |||||    
T  42813978 ggtattggtccctctattaactttctgttaaaaaaaaaaaaaaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatataggtattggt-ccctg 42814073  T
Q  739 cactttgt-aaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||| ||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  42814074 cactttgtaaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 42814143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 535 - 808
Target Start/End: Original strand, 14827495 - 14827762
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||        ||||| ||||||||||||||||||||||||    
T  14827495 aaaggtttaaatatgcctttagtccttgcactttcatcagattttggtatttgtccctacacttttttttgtttgaaattggtccctgcactttgtaaaa 14827594  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
     ||||  ||||| |||| ||||||||||||| ||         |||||||||||| |||||| | ||||| ||| |||||||||||||| |||||| | |    
T  14827595 gtattagtattggtcccgctattaactttctgtt-aaaaaaaacacaaaactatt-ggtatt-gctccctgcac-tttgtaaaaatattagtattggt-c 14827689  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||||||||   ||||| | || |||||||||||| ||||||||||||||| |||||    
T  14827690 cctgcactttgtaaaaatattgatatt-attgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 14827762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 41186252 - 41186468
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||        ||||| ||||||||||||||||||||||||||||||    
T  41186252 ttaaatatgtctttggtccatgcactttcatcagattttggcattggtctctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 41186351  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| ||||||| |||||||||||||         |||||||||||| |||||| | || || ||| ||||||||||||||||||||| | |||| ||    
T  41186352 gtattggtccctctgttaactttctatt--aaaaaaacacaaaactatt-ggtattag-tctctgcac-tttgtaaaaatattggtattgct-ccctaca 41186445  T
Q  741 ctttgtaaaaatattgatattgg 763  Q
    |||||||||||||||| ||||||    
T  41186446 ctttgtaaaaatattgttattgg 41186468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 541 - 801
Target Start/End: Original strand, 7900263 - 7900520
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||        ||||||||||||||| ||||||||||||||||||||    
T  7900263 ttaaatatatctttagtccctgcactttcatcagattttagcattggtccctacacttttttttgtttggaattggtcc-tgcactttgtaaaaatattg 7900361  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn---cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
     ||||| ||||||| |||| ||||| ||            |||||||||||||| |||| || || | |||||| |||||||||||||||||| |||| |    
T  7900362 gtattggtccctctgttaattttctgttaaaaaaaaaaaacacaaaactattgg-tattagt-ccatgcacttt-gtaaaaatattggtattggtccc-t 7900457  T
Q  738 gcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcact 801  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||||||||||| ||||||||||||    
T  7900458 gcactttgtaaaaatattgatatt-ggtgcca-catggtgtgaaatgattggaccacgtggcact 7900520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 11277991 - 11278122
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||| | ||        |||| |||||| |||||||||||||||||    
T  11277991 taaaggtttaaatatgtttttagtccttgcactttcatcagattttagcattagtccctaaacttttttttgtttagaattgatccctgcactttgtaaa 11278090  T
Q  634 aatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||||||    
T  11278091 aatattgatattgatccctctattaactttct 11278122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 25263759 - 25263545
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaaaatat 638  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||          ||||||||||||||| ||||||||||||||||||    
T  25263759 ttaaatatgcttttagtccttgcactttcatcagattttggcattggtccctacacttttttttttgtttggaattggtccatgcactttgtaaaaatat 25263660  T
Q  639 tgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    || ||||| ||||||| |||||||||| ||         |||||||||||| ||||||| |        | ||||||||||||||||||||| | |||||    
T  25263659 tggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-ggtattgat--------cctttgtaaaaatattggtattggt-ccctg 25263570  T
Q  739 cactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||||    
T  25263569 cactttgtaaaaatattgatattgg 25263545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 646
Target Start/End: Original strand, 40691399 - 40691504
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||    
T  40691399 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaatattg 40691498  T
Q  641 atattg 646  Q
    ||||||    
T  40691499 atattg 40691504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 541 - 749
Target Start/End: Complemental strand, 5674403 - 5674199
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||        |||||||||||| |||||||||||||||||||||||    
T  5674403 ttaaatatgtctttagttcttgcacttttatcagattttagcattggtccctacacttttttttgtttggaattggcccctgcactttgtaaaaatattg 5674304  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
      || | ||||||  |||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  5674303 gcatcggtccctccgttaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctgca 5674208  T
Q  741 ctttgtaaa 749  Q
    |||||||||    
T  5674207 ctttgtaaa 5674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 28625466 - 28625738
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaaaatat 638  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||| |||||  |||          |||||| |||||||| ||||||||||||||||||    
T  28625466 ttaaatatgtctttactccctgcactttcatcggattttggcattagtccctgcacttttttttttgtttggcattggtccatgcactttgtaaaaatat 28625565  T
Q  639 tgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    |  ||| |||||||| ||||| ||||| ||         |||||||||||||| ||||||| |||| |||||| ||| |||||||||||||| |||| ||    
T  28625566 tcgtatcgatccctcaattaattttctgttaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtacaaatattggtattggtccc-tg 28625661  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || ||| |||||||| ||||||||||||||| ||| ||||||||||    
T  28625662 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtaaaatgattgggccacgtggcactccgtt-ggttttgtgt 28625738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 34825685 - 34825809
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||        ||||||||||||||||| |||||| |||||||||||    
T  34825685 ttaaatatgtctttagtctctgcactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctacactttataaaaatattg 34825784  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  34825785 gtattggtccctctgttaactttct 34825809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 430576 - 430698
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||| |||||||||    
T  430576 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgt-aaaatattg 430673  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| || |||| || |||||||    
T  430674 gtattggtctctctcttgactttct 430698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 730
Target Start/End: Complemental strand, 45003152 - 45002967
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||  ||||        ||||| ||||||||| ||||||||||||||||||||    
T  45003152 ttaaatatgcgtttagtccttgcactttcatcaaattttggcattggtccatacacttgtttttgtttgaaattggtcc-tgcactttgtaaaaatattg 45003054  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||| || ||||||||||||||||||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  45003053 gtattggtctctctattaactttctattaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 45002967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 533 - 668
Target Start/End: Original strand, 33850448 - 33850583
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||| |||  || |||| |||||||||||||||||||||||||| ||||  |||        |||||| |||||||||||||||||||||    
T  33850448 ataaaggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaa 33850547  T
Q  633 aaatattgatattgatccctctattaactttctatt 668  Q
    |||||||| ||||| ||||||| |||||||||||||    
T  33850548 aaatattggtattggtccctctgttaactttctatt 33850583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 3963440 - 3963308
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggca-ttggtcccgacacnnnnnnnngtttggaa--ttggtccctgcactttgtaa 632  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||        ||| ||||  | ||||||||||||||||||    
T  3963440 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcatttggtccctacacttttttttgttgggaaattgggtccctgcactttgtaa 3963341  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||||||||||| ||||| ||||    
T  3963340 aaatattggtattgatccctctgttaaccttct 3963308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 541 - 730
Target Start/End: Original strand, 39060409 - 39060593
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||  |||         |||||||||||||| ||||||||||||| ||||||    
T  39060409 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccctgcacttttttttttttggaattggtccatgcactttgtaaacatattg 39060508  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
     ||||| ||| ||| |||||||||| ||         |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||    
T  39060509 gtattggtccatctgttaactttctgtt--aaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattg 39060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 668
Target Start/End: Original strand, 970455 - 970567
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    |||| |||||||||||||||||||||||||| ||||  |||        |||||| ||||||||||||||||||||||||||||| ||||| |||||||     
T  970455 gtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattggtattggtccctctg 970554  T
Q  656 ttaactttctatt 668  Q
    |||||||||||||    
T  970555 ttaactttctatt 970567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 18478703 - 18478579
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| || ||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  18478703 ttaaatgtgtcattggtccctggactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 18478604  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  18478603 gtattggtccctctgttaactttct 18478579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 34826094 - 34825970
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  34826094 ttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaatattg 34825995  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  34825994 gtattggtccctctgttaactttct 34825970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 40691694 - 40691570
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||| ||||||||||||||||||||    
T  40691694 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccatgcactttgtaaaaatattg 40691595  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  40691594 gtattggtccctctgttaactttct 40691570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 534 - 665
Target Start/End: Complemental strand, 42435066 - 42434934
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgt-aa 632  Q
    |||||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||| |||| ||| ||    
T  42435066 taaaggcttaaatatgtcattagtctctgcactttcatcagattttggcattggtccctacactttattttgtttggaattgatccctacactatgtaaa 42434967  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||| ||||||||||    
T  42434966 aaatattggtattggtccctctgttaactttct 42434934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 42814366 - 42814242
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||||||| |||||  |||        |||||| |||||||||||||||||||||||||||||    
T  42814366 ttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 42814267  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  42814266 gtattggtccctctgttaactttct 42814242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 4902619 - 4902749
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| ||||||||||||||||||||||    
T  4902619 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttgtcattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaa 4902717  T
Q  634 aatattgatattgatccctctattaactttct 665  Q
    ||||||| ||||| ||||||| ||||||||||    
T  4902718 aatattgttattggtccctctgttaactttct 4902749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 4950017 - 4950147
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| ||||||||||||||||||||||    
T  4950017 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaa 4950115  T
Q  634 aatattgatattgatccctctattaactttct 665  Q
    ||||||| ||||| ||||||| ||||||||||    
T  4950116 aatattgttattggtccctctgttaactttct 4950147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 541 - 646
Target Start/End: Original strand, 18478379 - 18478484
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||| |||| ||||||||||||||| |||| ||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  18478379 ttaaatatgcctttagtccctgcattttcatcagattttgacattagtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 18478478  T
Q  641 atattg 646  Q
     |||||    
T  18478479 gtattg 18478484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 621 - 817
Target Start/End: Complemental strand, 25251772 - 25251588
Alignment:
Q  621 tgcactttgtaaaaatattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaat 720  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||| ||         |||||||||||||| ||||| | |        |||||||||||    
T  25251772 tgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattgg-tattgatcc--------tttgtaaaaat 25251682  T
Q  721 attggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  25251681 attggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 25251588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 430929 - 430805
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||  |||||||| ||||||||||||||||||||    
T  430929 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccttgcactttgtaaaaatattg 430830  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  430829 gtattggtccctctgttaactttct 430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 8031429 - 8031305
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||||||| ||||||||||||||| ||||||||||  |||        |||||| ||||||||||| |||||||||||||||||    
T  8031429 ttaaatgtgtcattggtccttgcattttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgtactttgtaaaaatattg 8031330  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  8031329 gtattggtccctctgttaactttct 8031305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 32504391 - 32504267
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||  |||| ||||||||||||||||||||||||    
T  32504391 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattgatccctgcactttgtaaaaatattg 32504292  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  32504291 gtattggtccctctgttaactttct 32504267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 32927925 - 32927821
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| |    
T  32927925 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtgacgtgaaatgattgggccacgtggcactccgtt-g 32927830  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  32927829 gttttgtgt 32927821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 8031074 - 8031199
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac--nnnnnnnngtttggaattggtccctgcactttgtaaaaatat 638  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||          ||||||||||||| ||||||||||||||||||||    
T  8031074 ttaaatatgtctttagtccttgcactttcatcagattttgacattggtccatacacttttttttttgtttggaattggt-cctgcactttgtaaaaatat 8031172  T
Q  639 tgatattgatccctctattaactttct 665  Q
    || ||||  ||||||| | ||||||||    
T  8031173 tggtattagtccctctgtgaactttct 8031199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 535 - 646
Target Start/End: Complemental strand, 19591771 - 19591660
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||| |||||||||| || || ||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||    
T  19591771 aaaggcttaaacatgtctttagcccctgtactttcatcagattttgtcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 19591672  T
Q  635 atattgatattg 646  Q
    ||| || |||||    
T  19591671 atactggtattg 19591660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 11108410 - 11108534
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| | |||||||||||||||||||||||| ||||  |||        |||||| ||||||||||| |||||||||||||||||    
T  11108410 ttaaatgtgtcattggtccctacactttcatcagattttggcattgatccctgcacttttttacgtttggcattggtccctgtactttgtaaaaatattg 11108509  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||||||||||||||    
T  11108510 gtattggttcctctattaactttct 11108534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 11278310 - 11278250
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11278310 gtttggcattggtccctgcactttgtaaaaatattggtattgatccctctgttaactttct 11278250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 665
Target Start/End: Complemental strand, 14102992 - 14102860
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    |||||||  ||||| |||| || |||| ||||||||||||| |||||| |||||||| |  |||        |||||| |||||||||||||||||||||    
T  14102992 ataaaggtataaatgtgtcattggtccctgcactttcatcaaattttgacattggtctctgcacttttttttgtttggcattggtccctgcactttgtaa 14102893  T
Q  633 aaatattgatattgatccctctattaactttct 665  Q
    |||||||| ||||| ||||||| ||||||||||    
T  14102892 aaatattggtattggtccctctgttaactttct 14102860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 14827906 - 14827782
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||  ||         |||||  || ||||||||||||||||||||||||||    
T  14827906 ttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcagttttttttgtttgacatcggtccctgcactttgtaaaaatattg 14827807  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| | ||||| ||||||||||    
T  14827806 gtattggttcctctgttaactttct 14827782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 3963051 - 3963180
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||| |||||||| |||||| ||||||||||  |||        |||||| ||||||||||||||||||||||||    
T  3963051 aaggtttaaatgtgtcattggtccctgcattttcatcaaattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 3963150  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| |||||||  |||||||||    
T  3963151 tattggtattggtccctctgctaactttct 3963180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 32654226 - 32654105
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||  |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  32654226 ttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcacttttttt-gtttggcattggtccctgcactttgtaaaaatattg 32654128  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||| ||||||||    
T  32654127 gtattggtccctctgttaacttt 32654105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 4831528 - 4831404
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||| |||||| |||| |||||  |||        |||||| ||||||||||||||||||||||||||||     
T  4831528 ttaaatgtgtcattggtccctgcactttcatcatattttgacatttgtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatatta 4831429  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  4831428 gtattggtccctctgttaactttct 4831404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 18707591 - 18707651
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  18707591 gtttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 18707651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 734 - 817
Target Start/End: Original strand, 40691476 - 40691557
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  40691476 ccctgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactctgtt-ggttttgtgt 40691557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 2098639 - 2098580
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  2098639 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 2098580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 16265780 - 16265670
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||||||||||||||| |||||||||||||||||  |||| |||  |||         ||||||||||||| ||||||||||||||||||||||    
T  16265780 ttaaatatgtctttagtccttgtactttcatcagattttgatattgatccttacatttctttttgtttggaattggt-cctgcactttgtaaaaatattg 16265682  T
Q  641 atattgatccct 652  Q
     ||||| |||||    
T  16265681 gtattggtccct 16265670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 32927749 - 32927808
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  32927749 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 32927808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 710 - 806
Target Start/End: Original strand, 18478464 - 18478558
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgtt 806  Q
    ||||||||||||||||||||| | || |||||||||||||||||||| |||| ||||||| | || |||||||||||| ||||||||| |||||||||    
T  18478464 tttgtaaaaatattggtattggttcc-tgcactttgtaaaaatattggtatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgtcactctgtt 18478558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 25251522 - 25251575
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  25251522 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 25251575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 28625804 - 28625751
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  28625804 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 28625751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 802
Target Start/End: Complemental strand, 3963292 - 3963207
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| | ||||| | || |||||||||||| |||||||||||||||    
T  3963292 aaaactattggtattgatccc-tgcactttgtaaaaatattgatatt-gatgcca-cgtggcgtgaaatgattgggccacgtggcactc 3963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 18907270 - 18907210
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| |||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  18907270 gtttggcattggttcctgcactttgtaaaaatattggtattggtccctctgttaactttct 18907210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 43305957 - 43305906
Alignment:
Q  458 agttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  43305957 agttaatagaaacaatgtataatatatataaggttcgaggttcaaacttcga 43305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 32927713 - 32927763
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  32927713 ttaaatatgtcattggtccctgcactttcatcagattttggcattggtccc 32927763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 591
Target Start/End: Complemental strand, 2098682 - 2098625
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  2098682 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 2098625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 4902829 - 4902788
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgat 648  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  4902829 ttggtattggtccctgcactttgtaaaaatattgatattgat 4902788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 4950227 - 4950186
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgat 648  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  4950227 ttggtattggtccctgcactttgtaaaaatattgatattgat 4950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 713 - 762
Target Start/End: Complemental strand, 4950236 - 4950188
Alignment:
Q  713 gtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattg 762  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4950236 gtaaaaatattggtattggtccc-tgcactttgtaaaaatattgatattg 4950188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 41186656 - 41186531
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||         |||| | | ||||||||| ||||||||||||||||    
T  41186656 ttaaatgtgtcgttggtccctgcactttcatcagattttgacattggtccctgcactttttttttgttttgcactggtccctgtactttgtaaaaatatt 41186557  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||||| ||||||||||    
T  41186556 ggtattggtccctctgttaactttct 41186531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 42434751 - 42434804
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||| |||||    
T  42434751 attggtccctgcactttgtaaaaatattggtattggtccctctgttaattttct 42434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 665
Target Start/End: Complemental strand, 7900606 - 7900546
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||| ||||||| |||| |||||    
T  7900606 gtttggcattggtccctgtactttgtaaaaatattgctattggtccctctgttaattttct 7900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 640
Target Start/End: Original strand, 9776974 - 9777074
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||         |||||| |||||||||||||||||||| |||||||    
T  9776974 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgtataaatatt 9777073  T
Q  640 g 640  Q
    |    
T  9777074 g 9777074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 430724 - 430763
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  430724 ttggtattggtccctgcactttgtaaaaatattgatattg 430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 456 - 503
Target Start/End: Original strand, 3196571 - 3196618
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  3196571 tcagttgatatgaacaatgcataatatatgtaaggttcgagattcaaa 3196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 734 - 808
Target Start/End: Original strand, 11278155 - 11278228
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||| ||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  11278155 ccctgcactttgtaaaaatattaatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 11278228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 25251680 - 25251641
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  25251680 ttggtattggtccctgcactttgtaaaaatattgatattg 25251641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 32927913 - 32927874
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32927913 ttggtattggtccctgcactttgtaaaaatattgatattg 32927874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 39060781 - 39060654
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||| ||| ||||||||||| ||||||||||  |||        |||||| ||| |||| ||||||||||||||||||||    
T  39060781 ttaaatgtgtcattggtccctgcaattttatcagattttgacattggtccctgcacttttttttgtttggcattagtccatgcactttgtaaaaatattg 39060682  T
Q  641 atattgatccctctattaactttctatt 668  Q
     ||||| | ||||| |||||| ||||||    
T  39060681 gtattggttcctctgttaactatctatt 39060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 541 - 648
Target Start/End: Original strand, 45002848 - 45002954
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||| ||||||||||||||||||||||||  |||        ||||| ||||||| |||| |||||||||||||||||    
T  45002848 ttaaatgtgtcattggtccctgcactctcatcagattttggcattggtccctgcacttttttttgtttgaaattggt-cctgtactttgtaaaaatattg 45002946  T
Q  641 atattgat 648  Q
     |||||||    
T  45002947 gtattgat 45002954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 18707496 - 18707546
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  18707496 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 18707546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 29896354 - 29896296
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||| ||||||||||||||| |||||||| |||||||||| |||||| | |||||||||    
T  29896354 tgagtttaattcagttgatagaaacaatgcataatatatgcaaggtttggggttcaaac 29896296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 3963285 - 3963244
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgat 648  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  3963285 ttggtattgatccctgcactttgtaaaaatattgatattgat 3963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 755
Target Start/End: Complemental strand, 16265696 - 16265652
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatatt 755  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  16265696 tttgtaaaaatattggtattggtccc-tgcactttgtaaaaatatt 16265652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 19159944 - 19160001
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||  |||||||||    
T  19159944 agcttaactcagttgatatgaacaatgcataatatatgcaaggttcggagttcaaact 19160001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 652
Target Start/End: Complemental strand, 32927944 - 32927899
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||    
T  32927944 ttggtattggtccctgcactttgtaaaaatattggtattggtccct 32927899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 515
Target Start/End: Complemental strand, 40967431 - 40967362
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcgatcatca 515  Q
    ||||||||| ||||||||||   |||||| |||||||||| |||||| ||||||||||| |||| |||||    
T  40967431 tgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcgaccatca 40967362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 734 - 817
Target Start/End: Original strand, 42814147 - 42814229
Alignment:
Q  734 ccctgcactttgt-aaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||| ||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  42814147 ccctgcactttgtaaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 42814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 763
Target Start/End: Original strand, 430717 - 430764
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  430717 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg 430764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 516
Target Start/End: Complemental strand, 14414922 - 14414882
Alignment:
Q  476 ataatatatgtaaggttcgaggttcaaacttcgatcatcat 516  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  14414922 ataatatatgtaaggttcgaggttcaaactccgaccatcat 14414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 24581067 - 24581019
Alignment:
Q  456 tcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||| ||| |||||||| |||||||||| ||||||||||||||||||    
T  24581067 tcagttcataaaaacaatgcataatatatgcaaggttcgaggttcaaac 24581019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 450 - 502
Target Start/End: Complemental strand, 31166163 - 31166111
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaa 502  Q
    |||||||||||||||| | | ||||||||||||||||||||| | ||||||||    
T  31166163 cttaattcagttgatagagataatgtataatatatgtaaggtccaaggttcaa 31166111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 802
Target Start/End: Original strand, 39060547 - 39060632
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| ||||||||||| |||| |||||||||||||||||||| |||| ||||||| | || |||||||||||| ||||||||| |||||    
T  39060547 aaaactattggtattggtccc-tgcactttgtaaaaatattggtatt-ggtgcca-cgtggcgtgaaatgattgggccacgtgacactc 39060632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 763
Target Start/End: Complemental strand, 45003013 - 45002966
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgg 763  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  45003013 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattgg 45002966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 8031223 - 8031262
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  8031223 ttggtattggtccctgcgctttgtaaaaatattgatattg 8031262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 591
Target Start/End: Original strand, 16265583 - 16265638
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| |||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  16265583 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccc 16265638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 3323687 - 3323749
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcg 508  Q
    |||| |||||||| || |||  ||||||| |||||||||||||  ||||||||||||||||||    
T  3323687 tgagattaattcaatttataagaacaatgaataatatatgtaaaattcgaggttcaaacttcg 3323749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 605 - 659
Target Start/End: Complemental strand, 9791541 - 9791487
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaa 659  Q
    |||||| |||||||||| |||||| ||||||||||| ||||| ||| ||||||||    
T  9791541 gtttggcattggtccctacactttataaaaatattggtattggtccatctattaa 9791487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 11278149 - 11278183
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||| ||||||    
T  11278149 attggtccctgcactttgtaaaaatattaatattg 11278183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 12893304 - 12893250
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttc 500  Q
    ||||||||  ||||||||||  |||||||||||||||||||||||| | ||||||    
T  12893304 tgagcttagctcagttgataagaacaatgtataatatatgtaaggtccaaggttc 12893250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 37320577 - 37320523
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttc 500  Q
    ||||||||| ||||||| || | |||||| |||||||||| ||||||||||||||    
T  37320577 tgagcttaactcagttggtaaagacaatgcataatatatgcaaggttcgaggttc 37320523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 41682447 - 41682401
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggtt 492  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  41682447 tgagcttaactcagttggtataaataatgcataatatatgtaaggtt 41682401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 802
Target Start/End: Complemental strand, 42434914 - 42434831
Alignment:
Q  717 aaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||| || | |||||||||||||||||||| |||| ||||||| | || ||||| |||||| |||||||||||||||    
T  42434914 aaatattggtattggtcac-tgcactttgtaaaaatattggtatt-ggtgcca-cgtggcgtgagatgattgggccacgtggcactc 42434831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 44694693 - 44694747
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||| |||||||||||| |||||| |||||||||| |||| ||| |||||||||    
T  44694693 cttaactcagttgatatagacaatgcataatatatgcaaggctcggggttcaaac 44694747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 503
Target Start/End: Complemental strand, 45256187 - 45256141
Alignment:
Q  457 cagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||||    
T  45256187 cagttgatagaaagaatgtataatatatgtaagatccgaggttcaaa 45256141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 3951993 - 3952046
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||| ||||||||||||||||||||  ||||| ||| ||| ||||||||||    
T  3951993 attggtctctgcactttgtaaaaatattagtattggtccatctgttaactttct 3952046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 7121820 - 7121759
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    |||| |||| ||| ||||||||||||||| |||| ||||  || ||||||||||||||||||    
T  7121820 tgagtttaactcaattgatataaacaatgcataaaatatacaaagttcgaggttcaaacttc 7121759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 652
Target Start/End: Original strand, 34825835 - 34825880
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccct 652  Q
    |||| ||||||||||||||||||||||| ||||| ||||| |||||    
T  34825835 ttggtattggtccctgcactttgtaaaattattggtattggtccct 34825880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 504
Target Start/End: Complemental strand, 35281246 - 35281213
Alignment:
Q  471 aatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||||||||| ||||||||||||||||||    
T  35281246 aatgtataatatatgcaaggttcgaggttcaaac 35281213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 491
Target Start/End: Original strand, 41853370 - 41853411
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||| |||| |||||||||||||| ||||||||||||||||    
T  41853370 cttaactcagctgatataaacaatgcataatatatgtaaggt 41853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 57392 - 57664
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  57392 ttaaatatgtatttagtccttacactttcatcatattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 57491  T
Q  641 atattgatccctctattaactttctatt--nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||||||||| ||           |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |||||    
T  57492 gtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ccctg 57587  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||||| ||| ||||||||||    
T  57588 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccatgtggcactccgtt-ggttttgtgt 57664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 57801 - 57674
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||| ||||||||||||||||||||||||    
T  57801 ttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttcgtttggcattgatccctgcactttgtaaaaatattg 57702  T
Q  641 atattgatccctctattaactttctatt 668  Q
     ||||| ||||||| |||||||| ||||    
T  57701 gtattggtccctctgttaactttatatt 57674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 87)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 536 - 817
Target Start/End: Complemental strand, 30795193 - 30794917
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||        ||||||||||||||| |||||||||||||||    
T  30795193 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgacccctacacttttttttgtttggaattggtccttgcactttgtaaaaa 30795094  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    ||||| ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||    
T  30795093 tattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggtcc 30794997  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
      | ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||||||    
T  30794996 a-tacactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggttttgtgt 30794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 808
Target Start/End: Complemental strand, 32539185 - 32538922
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||        ||||||||||| ||| ||||||||||||||||||||    
T  32539185 ttaaatatgtctttagtccttgcactttcatcagattttggtattggttccaacacttttttttgtttggaattgatccatgcactttgtaaaaatattg 32539086  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn-cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
     ||||| |||||||||||||||||| ||          |||||||||||||| ||||||| ||||  ||||| |||||||||||||||||| |||| |||    
T  32539085 gtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgg-tattggt-ccctgtacttt-gtaaaaatattggtattggtccc-tgc 32538990  T
Q  740 actttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| |||||    
T  32538989 actttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttgg 32538922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 536 - 808
Target Start/End: Complemental strand, 10837584 - 10837314
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaa 634  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||         ||||| ||||||||||||||||||||||||    
T  10837584 aaggtttaaatatgtctttagtccttgcacttttatcagattttggcattggtccctacactttttttttgtttgaaattggtccctgcactttgtaaaa 10837485  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgat 732  Q
    |||||| ||||| || ||||||||||||||| ||           |||||||||||||| ||||||| |||| |||||| |||||||||||||||||| |    
T  10837484 atattggtattggtctctctattaactttctgttacaaaaaaaaacacaaaactattgg-tattggt-ccctgcacttt-gtaaaaatattggtattggt 10837388  T
Q  733 cccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||| |||||||| |||||    
T  10837387 ccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacatggcactccgttgg 10837314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 535 - 817
Target Start/End: Original strand, 42216252 - 42216528
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||||||||| |||||||||||| |||| |||||||||||||| || ||||        |||| ||||||||||  |||||||||||||    
T  42216252 aaaggtttaaatatgtctttaatccttgcacttttatcatattttggcattggttcctacacttttttttgtttagaattggtcctcgcactttgtaaaa 42216351  T
Q  635 atattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    |||||| ||||| |||||||||||||||||| ||         |||||||||||||  ||||||| |||| || |||||||||||||||||||||| |||    
T  42216352 atattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattga-tattggt-ccctgca-ttttgtaaaaatattggtattggtcc 42216448  T
Q  735 cctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    | ||||||||||||||||||||||||| ||||||| | || | |||||||||| ||||||||||||||| ||| ||||||||||    
T  42216449 c-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcatgaaatgattgggccacgtggcactccgtt-ggttttgtgt 42216528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 43857865 - 43857591
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||     
T  43857865 ttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatatta 43857766  T
Q  641 atattgatccctctattaactttctatt----nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccc 736  Q
     ||||| |||||||||||||||||| ||             |||||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | | |    
T  43857765 gtattggtccctctattaactttctgttaaaaaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-ctc 43857670  T
Q  737 tgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||| ||||||| | ||| ||||||||||    
T  43857669 tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccatgtggcacaccgtt-ggttttgtgt 43857591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 763
Target Start/End: Complemental strand, 9855717 - 9855498
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||         ||||||||||| ||||| |||||||||||||||||    
T  9855717 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttttttttgtttggaattgatccctacactttgtaaaaatatt 9855618  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    | ||||| ||||||| |||||||||| ||         |||||||||||| |||||| | ||||| ||| ||||||||||||||||||||| | ||||||    
T  9855617 ggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-ggtatttg-tccctgcac-tttgtaaaaatattggtattggt-ccctgc 9855522  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||    
T  9855521 actttgtaaaaatattgatattgg 9855498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 34181157 - 34181378
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  34181157 ttaaatatttctttagtcctcgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 34181256  T
Q  641 atattgatccctctattaactttctat---tnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccct 737  Q
     ||||||||||||||||||||||||||             ||||||||| || |||||||| |||||  || ||||||||||||||||||||| | ||||    
T  34181257 gtattgatccctctattaactttctataaaaaaaaaaaaacacaaaact-tttggtattgg-tccctgtac-tttgtaaaaatattggtattggt-ccct 34181352  T
Q  738 gcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||||    
T  34181353 gcactttgtaaaaatattgatattgg 34181378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 37405876 - 37406138
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||         |||||||||||||| ||||||||||||||||||||    
T  37405876 ttaaatatgcctttagttcttacactttcatcagattttggcattggtccctacactttttttt-tttggaattggtccttgcactttgtaaaaatattg 37405974  T
Q  641 atattgatccctctattaactttctattnnnnnnnnn--cacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
     ||||| |||||||||||||||||| ||           |||||||||||||| |||||||  ||| |||||| |||||||||||||||||| |||| ||    
T  37405975 gtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattgg-tattggt--cctgcacttt-gtaaaaatattggtattggtccc-tg 37406069  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||||||||||| ||||||| | || | |||||||||| ||||||||||||||| |||||    
T  37406070 cactttgtaaaaatattgatatt-ggtgcca-cgtggcttgaaatgattgggccacgtggcactccgttgg 37406138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 541 - 807
Target Start/End: Complemental strand, 17697011 - 17696748
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||| ||||||||||||||||||||    
T  17697011 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacactttttttttgtttggaattggtcactgcactttgtaaaaatatt 17696912  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
      ||||| || ||||||||||||||| ||          |||||||||||| |||||||| ||| | ||| ||| ||||||||||||||||  | |||||    
T  17696911 agtattggtctctctattaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccttgcac-tttataaaaatattggtattcgt-ccctg 17696816  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttg 807  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||||    
T  17696815 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgttg 17696748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 7050472 - 7050596
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  7050472 ttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 7050571  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  7050572 gtattggtccctctattaactttct 7050596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 10496100 - 10495976
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||| ||||||||||||||||||||||||    
T  10496100 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaatattg 10496001  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  10496000 gtattggtccctctgttaactttct 10495976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 536 - 663
Target Start/End: Complemental strand, 27697082 - 27696955
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  27697082 aaggtttaaatatgtctttagtccttgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 27696983  T
Q  636 tattgatattgatccctctattaacttt 663  Q
    ||||| ||||| ||| ||||||||||||    
T  27696982 tattggtattggtccatctattaacttt 27696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 817
Target Start/End: Complemental strand, 2057134 - 2056862
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||         ||||| |||||||||||| ||||||||||||||||    
T  2057134 ttaaatatacctttagtccttgcattttcatcagattttggcattggtccctacactttttttttgtttgaaattggtccctgtactttgtaaaaatatt 2057035  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
    | ||||| |||||||||||||||||| ||          |||||||||||| |||||||| |||||  || ||||||||||||||||||||| | || |     
T  2057034 ggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tccctgtac-tttgtaaaaatattggtattggt-ccata 2056939  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||| ||||||||||    
T  2056938 cactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactccgtt-ggttttgtgt 2056862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 4528644 - 4528769
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaat-att 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||| |||| |||||||||||| |||    
T  4528644 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtctctgccctttgtaaaaataatt 4528743  T
Q  640 gatattgatccctctattaactttct 665  Q
    | ||||| ||||||||||||||||||    
T  4528744 ggtattggtccctctattaactttct 4528769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 536 - 763
Target Start/End: Original strand, 26695406 - 26695627
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||        ||||||||||||||||| |||||||||||||    
T  26695406 aaggcttaaatatgtctttagtccatccactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaa 26695505  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||| | ||||||| |||||||||| ||          ||||||||||| | |||||| ||||||||| ||||||||| ||||||||||| | ||    
T  26695506 tattggtatcggtccctctgttaactttctgttaaaaaaag--acaaaactatt-gatattgg-tccctacac-tttgtaaaattattggtattggt-cc 26695599  T
Q  736 ctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||| ||||| ||||||    
T  26695600 ctgcactttgtaaaactattggtattgg 26695627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 536 - 668
Target Start/End: Original strand, 2705161 - 2705292
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||        ||||||||||||||| |||||||||||||||    
T  2705161 aaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctatac-tttttttgtttggaattggtccatgcactttgtaaaaa 2705259  T
Q  636 tattgatattgatccctctattaactttctatt 668  Q
    ||||| ||||| ||||||| |||||||||||||    
T  2705260 tattggtattggtccctctgttaactttctatt 2705292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 541 - 763
Target Start/End: Original strand, 7229971 - 7230189
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn-gtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||| |||| ||||         ||||||||||| |||||||| ||||||||||||||    
T  7229971 ttaaatatgtctttagtccctgcacttttatcagattttggtattgatccctacactttttttttgtttggaattgatccctgcattttgtaaaaatatt 7230070  T
Q  640 gatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgc 739  Q
    ||||||| ||||||| |||||||| | ||         |||||||||||| |||||| | ||||| ||| ||||||||||||||||||||| | ||||||    
T  7230071 gatattggtccctctgttaactttttgtt-aaaaaaaacacaaaactatt-ggtattag-tccctgcac-tttgtaaaaatattggtattggt-ccctgc 7230165  T
Q  740 actttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||    
T  7230166 actttgtaaaaatattgatattgg 7230189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 2233032 - 2232922
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||        |||||||||||||| |||||||||||||||||||||    
T  2233032 ttaaatatgtctttagtccttgcactttcattagcttttggcattggtccctacac-attttttgtttggaattggtctctgcactttgtaaaaatattg 2232934  T
Q  641 atattgatccct 652  Q
    |||||| |||||    
T  2232933 atattggtccct 2232922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 7050935 - 7050811
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||| |||||||||||||||||    
T  7050935 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgaactttgtaaaaatattg 7050836  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  7050835 gtattggtccctctgttaactttct 7050811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 10495719 - 10495849
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| ||||||||||| ||  ||| |||||||||||||||||||| ||||||||||  |||        |||||| |||||||||||||||||||||||    
T  10495719 aaaggtttaaatatgtcattgatccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 10495818  T
Q  635 atattgatattgatccctctattaactttct 665  Q
    |||||| ||||  ||||||| ||||||||||    
T  10495819 atattggtattagtccctctgttaactttct 10495849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 556 - 665
Target Start/End: Complemental strand, 37406267 - 37406158
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctcta 655  Q
    ||||||||||||| ||||||||||||||||||||||  |||        |||||| |||||||| |||||||||||||||||||| ||||| |||||||     
T  37406267 gtccttgcactttgatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaatattggtattggtccctctg 37406168  T
Q  656 ttaactttct 665  Q
    ||||||||||    
T  37406167 ttaactttct 37406158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 536 - 665
Target Start/End: Complemental strand, 42216671 - 42216542
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||| ||||||||||||||||||  |||        |||||| ||||||| ||||||||||||||||    
T  42216671 aaggtttaaatgtgtcattggtccctgcactttcatcggattttggcattggtccctgcactttttttagtttggcattggtctctgcactttgtaaaaa 42216572  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| || |||||||||||||||    
T  42216571 tattggtattggtcactctattaactttct 42216542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 561 - 665
Target Start/End: Complemental strand, 7678631 - 7678527
Alignment:
Q  561 tgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaac 660  Q
    ||||||||||||| |||||||||||||||||  |||        |||||| ||||||||||||||||||||||||||||||||||| |||||||  ||||    
T  7678631 tgcactttcatcaaattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattgatattggtccctctgctaac 7678532  T
Q  661 tttct 665  Q
    |||||    
T  7678531 tttct 7678527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Complemental strand, 26695816 - 26695692
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| ||||||||||||||||||||| |||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  26695816 ttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttgtttttgtttggtattggtccctgcactttgtaaaaatattg 26695717  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||| | ||||||||||    
T  26695716 gtattggtccctttgttaactttct 26695692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 663
Target Start/End: Original strand, 2056722 - 2056845
Alignment:
Q  540 attaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||| |||| || |||| |||||||||||||||||||||||||||| ||  |||        |||||| ||||||||||||||||||||||||||||    
T  2056722 attaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcactattttttgtttggcattggtccctgcactttgtaaaaatatt 2056821  T
Q  640 gatattgatccctctattaacttt 663  Q
    || |||| ||||| | ||||||||    
T  2056822 gaaattggtccctttgttaacttt 2056845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 533 - 659
Target Start/End: Original strand, 17696605 - 17696731
Alignment:
Q  533 ataaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaa 632  Q
    ||||||| |||||| |||| || |||| |||||||||||||||||||| ||||||||||  |||        |||||| ||||||| |||||||||||||    
T  17696605 ataaaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtcactgcactttgtaa 17696704  T
Q  633 aaatattgatattgatccctctattaa 659  Q
    |||||||| ||||| ||||||| ||||    
T  17696705 aaatattggtattggtccctctgttaa 17696731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 541 - 659
Target Start/End: Complemental strand, 32924102 - 32923985
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||        ||||||||||| ||| ||||||||||||||||||||    
T  32924102 ttaaatatgcctttagtccctgcactttcatcagattttgacattggtccctacac-ttcttttgtttggaattgatccatgcactttgtaaaaatattg 32924004  T
Q  641 atattgatccctctattaa 659  Q
      |||||| ||||| ||||    
T  32924003 gcattgattcctctgttaa 32923985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 27696699 - 27696823
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        ||||||  ||||||| ||||||||||||||||||||    
T  27696699 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggccttggtccttgcactttgtaaaaatattg 27696798  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| | ||||||||    
T  27696799 gtattggtccctctgtcaactttct 27696823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 7678278 - 7678401
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||| || | ||||        |||||||||||||| |||||||||||||||||||||    
T  7678278 ttaaatatgtctttagtctctgcatttttatcagattttggcattgatctctacacttttttt-gtttggaattggtctctgcactttgtaaaaatattg 7678376  T
Q  641 atattgatccctctattaactttct 665  Q
      |||||||||||| ||||| ||||    
T  7678377 gcattgatccctctgttaaccttct 7678401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 536 - 663
Target Start/End: Complemental strand, 34181547 - 34181421
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| ||||||||||||||||| ||||||    
T  34181547 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttataaaaa 34181448  T
Q  636 tattgatattgatccctctattaacttt 663  Q
    || || ||||| ||||||| ||||||||    
T  34181447 ta-tggtattggtccctctgttaacttt 34181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 607 - 665
Target Start/End: Original strand, 7050623 - 7050681
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  7050623 ttggtattggtccctgcactttgtaaaaatattggtattggtccctctattaactttct 7050681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 2232948 - 2232844
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgg 808  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||  |||||| | || |||||||||||| ||||||||||||||| ||| |    
T  2232948 tttgtaaaaatattgatattggtccc-tgcactttgtaaaaatattgatatt-agtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-g 2232853  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  2232852 gttttgtgt 2232844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 9855310 - 9855434
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| || ||||||||||||||||||||||||||||  |||        |||||| ||||||| ||| |||||||||||||||||    
T  9855310 ttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtctctgtactttgtaaaaatattg 9855409  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||| ||||||    
T  9855410 gtattggtccctctgttagctttct 9855434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 536 - 665
Target Start/End: Original strand, 32923722 - 32923850
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| |||||| |||| || |||| ||||||||||||||||||||||||||||| |  |||        |||||| |||| |||||||||||||||||||    
T  32923722 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttt-gtttggcattgatccctgcactttgtaaaaa 32923820  T
Q  636 tattgatattgatccctctattaactttct 665  Q
    ||||| ||||| |||||||  |||||||||    
T  32923821 tattggtattggtccctctgctaactttct 32923850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 665
Target Start/End: Complemental strand, 7230364 - 7230254
Alignment:
Q  557 tccttgcactttcatcagattttggcattggtcccgacacnnnnnnnn--gtttggaattggtccctgcactttgtaaaaatattgatattgatccctct 654  Q
    |||||||||||||||||||||||||||||| ||||  |||          |||||| ||||||||||| ||||||||||||||||| |||||||| ||||    
T  7230364 tccttgcactttcatcagattttggcattgatccctgcacttttttttttgtttggcattggtccctgtactttgtaaaaatattggtattgatctctct 7230265  T
Q  655 attaactttct 665  Q
     ||||||||||    
T  7230264 gttaactttct 7230254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 10837169 - 10837292
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  10837169 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaatattg 10837267  T
Q  641 atattgatccctctattaactttct 665  Q
     ||| | || || | ||||||||||    
T  10837268 gtatcggtctctatgttaactttct 10837292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 41441453 - 41441512
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  41441453 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 41441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 32538841 - 32538899
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  32538841 gtttggtattggtctctgcactttgtaaaaatattgatattggtccctctgttaacttt 32538899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 2232777 - 2232830
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  2232777 attggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 2232830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 734 - 802
Target Start/End: Complemental strand, 32923946 - 32923879
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  32923946 ccctgcactttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggccacgtggcactc 32923879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 802
Target Start/End: Original strand, 7050701 - 7050786
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||||||||    
T  7050701 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactc 7050786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 18422511 - 18422455
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||| | |||||||    
T  18422511 agcttaattcagttgatagaaacaatgcataatatatgtaaggttcgggattcaaac 18422455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 710 - 817
Target Start/End: Complemental strand, 41441628 - 41441524
Alignment:
Q  710 tttgtaaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgg 808  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| || |||  || |||||||||||||| ||||||||||||| ||| |    
T  41441628 tttgaaaaaatattagtattggtccc-tgcactttgtaaaaatattgatattgg-tgtcacg-tggcgtgaaatgattgggccacgtggcactccgtt-g 41441533  T
Q  809 gttttgtgt 817  Q
    |||||||||    
T  41441532 gttttgtgt 41441524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 541 - 589
Target Start/End: Complemental strand, 41441684 - 41441636
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtc 589  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  41441684 ttaaatatgtctttagtccttgcactttcatgagattttggtattggtc 41441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 654
Target Start/End: Complemental strand, 2705555 - 2705436
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| ||  ||| |||||||||||||||||||||||||||||||  |||        |||||  |||||||| | ||||||||||||    
T  2705555 aaaggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccatacactttgtaaaa 2705456  T
Q  635 atattgatattgatccctct 654  Q
    |||||| ||||| |||||||    
T  2705455 atattggtattggtccctct 2705436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 4528787 - 4528886
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||| ||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  4528787 aaaactattggtattggtccc-tgcacttagtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 4528882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 13284326 - 13284267
Alignment:
Q  445 atgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  13284326 atgagtttaactcagttgatatgaacaatgtataatatatataaggtttgaggttcaaac 13284267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 736 - 817
Target Start/End: Complemental strand, 27696917 - 27696838
Alignment:
Q  736 ctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||| ||| ||||||||||| ||| ||||||||||    
T  27696917 ctgcactttgtaaaaatattgatatt-ggtgcca-catggcgtgaaatgattgggctacgtggcactccgtt-ggttttgtgt 27696838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 4528953 - 4528900
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  4528953 attggtccctgcactttgtaaaaatattagtattggtccctctgttaactttct 4528900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 612 - 665
Target Start/End: Complemental strand, 42686329 - 42686276
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||    
T  42686329 attggtccatgcactttgtaaaaatattggtattggtccctctgttaactttct 42686276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 42932288 - 42932231
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    |||| ||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  42932288 tgagtttagttcacttggtataaacaatgtataatatatgtaaggtttgaggttcaaa 42932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 10495960 - 10495862
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||  ||||||||||||||||||||||||| ||||||| | || | |||||||||| ||||||||||||||| ||| ||||||    
T  10495960 aaaactattggtattggtcc--tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcatgaaatgattgggccacgtggcactccgtt-ggtttt 10495866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 7050708 - 7050747
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7050708 ttggtattggtccctgcactttgtaaaaatattgatattg 7050747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 448 - 515
Target Start/End: Complemental strand, 22257173 - 22257106
Alignment:
Q  448 agcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcgatcatca 515  Q
    ||||||| ||| |||| | ||| ||||||| |||||||||||||||| |||||||||| |||||||||    
T  22257173 agcttaactcaattgacaaaaataatgtatgatatatgtaaggttcggggttcaaactccgatcatca 22257106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 42686026 - 42686081
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    ||||||||||| ||||||  |||||||||||||||||||| |||||||||| ||||    
T  42686026 ttaaatatgtcattagtctctgcactttcatcagattttgacattggtccctacac 42686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 3650521 - 3650579
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||| || ||| |||| ||||||||||||||||||| |||||||||    
T  3650521 tgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaac 3650579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 737 - 802
Target Start/End: Original strand, 7678438 - 7678502
Alignment:
Q  737 tgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactc 802  Q
    ||||||||||||||||||||||||| ||| ||||| || |||||||||||| |||||||||||||||    
T  7678438 tgcactttgtaaaaatattgatatt-ggtaccacc-tggcgtgaaatgattgggccacgtggcactc 7678502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 30794810 - 30794860
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  30794810 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 30794860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 32923952 - 32923918
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  32923952 attggtccctgcactttgtaaaaatattgatattg 32923918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 36919312 - 36919366
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttc 500  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||||||| ||||||    
T  36919312 tgagcttaactcagttggtaagaacaatgtataatatatgtaaggttcaaggttc 36919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 41441417 - 41441467
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  41441417 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 41441467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 41441611 - 41441577
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  41441611 attggtccctgcactttgtaaaaatattgatattg 41441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 42686145 - 42686179
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||||||||||||||||||||||||||||||    
T  42686145 attggtccctgcactttgtaaaaatattgatattg 42686179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 645
Target Start/End: Complemental strand, 2232931 - 2232898
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatatt 645  Q
    ||||||||||||||||||||||||||||||||||    
T  2232931 attggtccctgcactttgtaaaaatattgatatt 2232898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 3456877 - 3456821
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  3456877 cttaactcaattgatatgaacaatgcataatatatgtaaggttcg-ggttcaaacttc 3456821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 665
Target Start/End: Original strand, 42686068 - 42686121
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    |||||||||| |||||||||||||||||||||||| | ||| | ||||||||||    
T  42686068 attggtccctacactttgtaaaaatattgatattggttcctttgttaactttct 42686121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 509
Target Start/End: Original strand, 574376 - 574448
Alignment:
Q  437 atgtgcttatgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaacttcga 509  Q
    |||| ||| ||||||||  |||||||||||| |||||| |||||||||||||||| ||  |||| ||||||||    
T  574376 atgtccttgtgagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaacttcga 574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 4528794 - 4528833
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  4528794 ttggtattggtccctgcacttagtaaaaatattgatattg 4528833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 591
Target Start/End: Complemental strand, 4529031 - 4528976
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||| |||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  4529031 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccc 4528976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 504
Target Start/End: Complemental strand, 7147249 - 7147214
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||||||||||||||||||||| |||||||||    
T  7147249 acaatgtataatatatgtaaggttcgtggttcaaac 7147214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 24202156 - 24202210
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||||||| ||||||||||  ||||||||| ||||||||| ||||||||||    
T  24202156 cttaattcagttggtataaacaatacataatatatataaggttcg-ggttcaaact 24202210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 505
Target Start/End: Original strand, 29293178 - 29293237
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||| |||||| ||||| ||||| ||||||||||||||||| ||  |||||||||    
T  29293178 tgagcttaactcagttaatatagacaatatataatatatgtaaggtccggagttcaaact 29293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 505
Target Start/End: Original strand, 37141362 - 37141417
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaact 505  Q
    ||||||||||||| |||  |||||| |||||||||| |||||||| ||||||||||    
T  37141362 cttaattcagttggtatggacaatgcataatatatgcaaggttcggggttcaaact 37141417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 2232735 - 2232785
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    |||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  2232735 ttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccc 2232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Original strand, 7678429 - 7678463
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    |||||||| ||||||||||||||||||||||||||    
T  7678429 attggtccttgcactttgtaaaaatattgatattg 7678463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 9070982 - 9071020
Alignment:
Q  469 acaatgtataatatatgtaaggttcgaggttcaaacttc 507  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  9070982 acaatgtataatatatgtaaggtccgaggttcgaacttc 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 13357501 - 13357443
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||| ||||||| |||  |||||| |||||||||| ||||| ||||||||||||    
T  13357501 tgagcttaactcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaac 13357443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 646
Target Start/End: Complemental strand, 27696925 - 27696891
Alignment:
Q  612 attggtccctgcactttgtaaaaatattgatattg 646  Q
    ||||||| |||||||||||||||||||||||||||    
T  27696925 attggtctctgcactttgtaaaaatattgatattg 27696891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 30417670 - 30417612
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    ||||||||  ||||||| |||| ||||||||||||||||| | |||||| |||||||||    
T  30417670 tgagcttagctcagttggtatagacaatgtataatatatgcatggttcggggttcaaac 30417612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 496
Target Start/End: Complemental strand, 31085924 - 31085874
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgag 496  Q
    ||||||||  ||||||||||| ||||||||||||| |||||||||| ||||    
T  31085924 tgagcttagctcagttgatatgaacaatgtataatgtatgtaaggtccgag 31085874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 32115466 - 32115408
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||| ||| ||||||| ||||  |||||| ||||||||||||||||||| |||||||||    
T  32115466 tgagtttagttcagttaatatggacaatgcataatatatgtaaggttcggggttcaaac 32115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 1877722 - 1877677
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggt 491  Q
    ||||||||| |||||||||||| |||||| |||||||||| |||||    
T  1877722 tgagcttaactcagttgatatagacaatgcataatatatgcaaggt 1877677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 763
Target Start/End: Complemental strand, 7678574 - 7678545
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||||||||    
T  7678574 ccctgcactttgtaaaaatattgatattgg 7678545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 10982727 - 10982784
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||| ||||||| |||  ||||| ||||||||||| |||||||| ||||||||    
T  10982727 tgagcttaactcagttggtatggacaatatataatatatgcaaggttcggggttcaaa 10982784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 504
Target Start/End: Original strand, 32421563 - 32421628
Alignment:
Q  439 gtgcttatgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||| ||||||||| ||||||| |||  ||||| ||||||||||| ||||| || |||||||||    
T  32421563 gtgcttgtgagcttaactcagttggtatggacaatatataatatatgcaaggtccggggttcaaac 32421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 763
Target Start/End: Original strand, 42686151 - 42686180
Alignment:
Q  734 ccctgcactttgtaaaaatattgatattgg 763  Q
    ||||||||||||||||||||||||||||||    
T  42686151 ccctgcactttgtaaaaatattgatattgg 42686180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 654
Target Start/End: Original strand, 43857530 - 43857579
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctct 654  Q
    |||||| ||||||| ||| ||||||||||||||||| ||||| |||||||    
T  43857530 gtttggcattggtctctgtactttgtaaaaatattggtattggtccctct 43857579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 90; Significance: 5e-43; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 536 - 763
Target Start/End: Complemental strand, 9951 - 9727
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  9951 aaggtttaaatatgcctttaatccttgcacttttatcagattttggcattggtccctacaccattttttgtttggaattggtccctgcactttgtaaaaa 9852  T
Q  636 tattgatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcc 734  Q
    ||||| ||||| |||||||||||||||||| ||           | ||||||||| |||||||| ||||| ||| ||||||||||||||||||||| | |    
T  9851 tattggtattggtccctctattaactttctgttaaaaaaaaaatagaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattggt-c 9756  T
Q  735 cctgcactttgtaaaaatattgatattgg 763  Q
    |||||||||||||||||||||||||||||    
T  9755 cctgcactttgtaaaaatattgatattgg 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 665
Target Start/End: Original strand, 9625 - 9684
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  9625 tttggcattggtccctgcactttgtaaaaatattggtattagtccctctgttaactttct 9684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 9590 - 9639
Alignment:
Q  542 taaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  9590 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 88; Significance: 8e-42; HSPs: 4)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 536 - 730
Target Start/End: Original strand, 1264 - 1454
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||    
T  1264 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 1363  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
    ||||| ||||||| |||||||||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||||||||| |||||    
T  1364 tattggtattgat-cctctattaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattgatattg 1454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 1408 - 1507
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| |||||||||| |||| ||| ||||||    
T  1408 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggtactccgtt-ggtttt 1503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 1581 - 1522
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| |||| ||||||||||||||||||||| || ||||| | ||||| ||||||||||    
T  1581 tttggcattgatccctgcactttgtaaaaataatgttattggttcctctgttaactttct 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 591
Target Start/End: Complemental strand, 1602 - 1567
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1602 gtccttgcactttcatcagattttggcattgatccc 1567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 541 - 817
Target Start/End: Original strand, 16839 - 17109
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||||| | |||          |||||||||| ||||||||||||||||||||||||    
T  16839 ttaaatatgtctttagtccttacacttttatcagattttgacattggtctctacatttttttttttttggaattgatccctgcactttgtaaaaatattg 16938  T
Q  641 atattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctgca 740  Q
     ||||| |||||||||||||||||| ||         |||||||||||| |||||| | ||||| ||| ||||||||||||||||||||| | |||| ||    
T  16939 gtattggtccctctattaactttctgttaaaaaaaaacacaaaactatt-ggtatttg-tccctgcac-tttgtaaaaatattggtattggt-ccctaca 17034  T
Q  741 ctttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggttttgtgt 817  Q
    ||||||||||||||||||||| ||||||| | || |||||||||||| || |||||||||||| ||| ||||||||||    
T  17035 ctttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggtcacgtggcactccgtt-ggttttgtgt 17109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 645
Target Start/End: Complemental strand, 17231 - 17142
Alignment:
Q  556 gtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattgatatt 645  Q
    |||| ||||||||||| |||||||||||||||||||  |||        |||||  ||||||||||||||||||||||||||||| ||||    
T  17231 gtccctgcactttcattagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactttgtaaaaatattggtatt 17142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 85; Significance: 5e-40; HSPs: 5)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 5512 - 5636
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  5512 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 5611  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||| ||||||||||||    
T  5612 gtattggtccctgtattaactttct 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 5657 - 5756
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  5657 aaaactattggtattggtccc-tgcactttgtaaaaatattgatatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 5829 - 5770
Alignment:
Q  606 tttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaactttct 665  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  5829 tttggcattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttct 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 591
Target Start/End: Complemental strand, 5871 - 5815
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtccc 591  Q
    ||||| |||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  5871 aaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 5815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Original strand, 5664 - 5703
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5664 ttggtattggtccctgcactttgtaaaaatattgatattg 5703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 541 - 808
Target Start/End: Original strand, 35337 - 35601
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac-nnnnnnnngtttggaattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||         |||||||||||||||||||||||||||||||||||    
T  35337 ttaaatatgtctttaatccttgcactttcatcagattttggcattggtcactacactttttttttgtttggaattggtccctgcactttgtaaaaatatt 35436  T
Q  640 gatattgatccctctattaactttctatt-nnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatcccctg 738  Q
      ||||| ||| |||||||||||||| ||          |||||||||||| |||||||| || ||  || ||||||||||||||||||||| | || ||    
T  35437 agtattggtccatctattaactttctgttaaaaaaaaaacacaaaactatt-ggtattgg-tctctggac-tttgtaaaaatattggtattggt-ccatg 35532  T
Q  739 cactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgat-tggccacgtggcactctgttgg 808  Q
    |||||||||||| |||||||||| ||||||| |||| |||||||||||  ||||||||||||||| |||||    
T  35533 cactttgtaaaactattgatatt-ggtgcca-catggcgtgaaatgatggggccacgtggcactccgttgg 35601  T

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Target: scaffold0045; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 659
Target Start/End: Complemental strand, 35755 - 35631
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||| |||| || |||| |||||||||||||||||||||||||| ||||  |||        |||||  |||||||||||||||||||||||    
T  35755 aaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttgacattggtccctgcactttgtaaaa 35656  T
Q  635 atattgatattgatccctctattaa 659  Q
    |||||| ||||| ||||||| ||||    
T  35655 atattggtattggtccctctgttaa 35631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 536 - 761
Target Start/End: Complemental strand, 50131 - 49910
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||        ||||||||||||||| | |||||||||||||    
T  50131 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccatacactttgtaaaaa 50032  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattgatccc 735  Q
    ||||| ||||| ||||||| |||||||||| ||         |||||||||||| |||||||| ||||| ||| ||||||||| |||||||||| |  ||    
T  50031 tattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaattattggtatt-agtcc 49936  T
Q  736 ctgcactttgtaaaaatattgatatt 761  Q
     |||||||||||||| ||||| ||||    
T  49935 atgcactttgtaaaactattggtatt 49910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 665
Target Start/End: Original strand, 49713 - 49843
Alignment:
Q  534 taaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaa 633  Q
    |||||| |||||| |||| || |||| ||||||||||||||||||||| |||||||||  ||          ||||| ||||||||||||||||||||||    
T  49713 taaaggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcattttttttt-tttggcattggtccctgcactttgtaaa 49811  T
Q  634 aatattgatattgatccctctattaactttct 665  Q
    ||||||| ||||| ||||||| |||| |||||    
T  49812 aatattggtattggtccctctgttaaatttct 49843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 1177 - 1301
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||        ||||| ||||||||||||||||||||||||||||||    
T  1177 ttaaatatgcctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttgaaattggtccctgcactttgtaaaaatattg 1276  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||||||||||||||    
T  1277 gtattggtccctctattaactttct 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 651
Target Start/End: Original strand, 1325 - 1369
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattgatccc 651  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  1325 ttggtattggtccctgcactttgtaaaaatattggtattggtccc 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 73; Significance: 7e-33; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 58450 - 58574
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||        ||||||||||||||||||||||||||||||||||||    
T  58450 ttaaatatgtctttagtccttgcactttcatcaaattttgacattggtccttacacttttttttgtttggaattggtccctgcactttgtaaaaatattg 58549  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  58550 gtattggtccctcttttaactttct 58574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 541 - 663
Target Start/End: Complemental strand, 58829 - 58707
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||  |||        |||||| |||||||||||||||||||||||||||||    
T  58829 ttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaatattg 58730  T
Q  641 atattgatccctctattaacttt 663  Q
     ||||| ||||||| ||||||||    
T  58729 gtattggtccctctgttaacttt 58707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 817
Target Start/End: Original strand, 58590 - 58689
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgatt-ggccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| |||||||||||||||||||  |||| ||||||| | || |||||||||||| ||||||||||||||| ||| ||||||    
T  58590 aaaactattggtattggtccc-tgcactttgtaaaaatattagtatt-ggtgcca-cgtggcgtgaaatgattgggccacgtggcactccgtt-ggtttt 58685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 536 - 730
Target Start/End: Original strand, 12966 - 13156
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaa 635  Q
    |||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||        |||||||||||||||||||| ||||||||||    
T  12966 aaggcttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacacttttttt-gtttggaattggtccctgcagtttgtaaaaa 13064  T
Q  636 tattgatattgatccctctattaactttctattnnnnnnnnncacaaaactattgggtattggttccctacacttttgtaaaaatattggtattg 730  Q
    ||||| ||||| ||||||| |||||||| | ||         |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||    
T  13065 tattggtattggtccctctcttaactttatgttaaaaaaaaacacaaaactatt-ggtattgg-tccctgcac-tttgtaaaaatattggtattg 13156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 596
Target Start/End: Complemental strand, 82 - 22
Alignment:
Q  536 aaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacac 596  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  82 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac 22  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 5271 - 5395
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| ||   ||||        ||||||||||||||||| |||||||||||||||||     
T  5271 ttaaatatgtctttagttcatgcactttcatcagattttagcattgatctttacactttattttgtttggaattggtccctacactttgtaaaaatatta 5370  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  5371 gtattggtccctctgttaactttct 5395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 541 - 665
Target Start/End: Original strand, 5302 - 5426
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaaatattg 640  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||| ||   ||||        ||||||||||||||||| |||||||||||||||||     
T  5302 ttaaatatgtctttagttcatgcactttcatcagattttagcattgatctttacactttattttgtttggaattggtccctacactttgtaaaaatatta 5401  T
Q  641 atattgatccctctattaactttct 665  Q
     ||||| ||||||| ||||||||||    
T  5402 gtattggtccctctgttaactttct 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 541 - 654
Target Start/End: Complemental strand, 24447 - 24333
Alignment:
Q  541 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttgg-aattggtccctgcactttgtaaaaatatt 639  Q
    ||||||||| |||||||||| |||||||||||| |||| |||||||||||| ||||        | |||| |||||||||||||||||||||||||||||    
T  24447 ttaaatatgcctttagtcctggcactttcatcaaatttgggcattggtccctacacttttttttggttgggaattggtccctgcactttgtaaaaatatt 24348  T
Q  640 gatattgatccctct 654  Q
    | ||||| |||||||    
T  24347 ggtattggtccctct 24333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 663
Target Start/End: Original strand, 8060 - 8188
Alignment:
Q  535 aaaggattaaatatgtctttagtccttgcactttcatcagattttggcattggtcccgacacnnnnnnnngtttggaattggtccctgcactttgtaaaa 634  Q
    ||||| |||||||||||  | |||| |||||||||||||||||||| |||||||||   |||        |||||| |||||||| ||||||||||||||    
T  8060 aaaggtttaaatatgtcactggtccctgcactttcatcagattttgacattggtccttgcacttttttttgtttggcattggtccttgcactttgtaaaa 8159  T
Q  635 atattgatattgatccctctattaacttt 663  Q
    |||||| ||||| ||||||| ||||||||    
T  8160 atattggtattggtccctctgttaacttt 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 715 - 817
Target Start/End: Complemental strand, 8304 - 8205
Alignment:
Q  715 aaaaatattggtattgatcccctgcactttgtaaaaatattgatattgggtgccaccatgccgtgaaatgattgg-ccacgtggcactctgttgggtttt 813  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||| | ||||  || |||||||||| ||| ||||||||||||| ||| ||||||    
T  8304 aaaactattggtattggtccc-tgcactttgtaaaaatattgatattggtt-ccacg-tggcgtgaaatgactgggccacgtggcactccgtt-ggtttt 8209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 607 - 646
Target Start/End: Complemental strand, 8297 - 8258
Alignment:
Q  607 ttggaattggtccctgcactttgtaaaaatattgatattg 646  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  8297 ttggtattggtccctgcactttgtaaaaatattgatattg 8258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 663
Target Start/End: Original strand, 3016 - 3074
Alignment:
Q  605 gtttggaattggtccctgcactttgtaaaaatattgatattgatccctctattaacttt 663  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  3016 gtttggcattggtccttgcactttgtaaaaatattggtattgatccctctattaacttt 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 14205 - 14258
Alignment:
Q  450 cttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaa 503  Q
    ||||||||||||||||  ||||||  ||||||||||||||||| ||||||||||    
T  14205 cttaattcagttgatagtaacaatacataatatatgtaaggtttgaggttcaaa 14258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 22912 - 22970
Alignment:
Q  446 tgagcttaattcagttgatataaacaatgtataatatatgtaaggttcgaggttcaaac 504  Q
    |||||||| || ||||||||| ||||||| |||| ||||| ||||| ||||||||||||    
T  22912 tgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttcaaac 22970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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