View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16430_high_5 (Length: 327)

Name: NF16430_high_5
Description: NF16430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16430_high_5
NF16430_high_5
[»] chr8 (60 HSPs)
chr8 (14-323)||(10939239-10939538)
chr8 (168-267)||(11569422-11569521)
chr8 (191-267)||(27754433-27754509)
chr8 (196-266)||(32840951-32841022)
chr8 (169-263)||(11185228-11185322)
chr8 (191-265)||(12851205-12851279)
chr8 (125-267)||(14949827-14949971)
chr8 (191-267)||(35643952-35644029)
chr8 (191-267)||(5088881-5088957)
chr8 (191-266)||(7918412-7918487)
chr8 (191-266)||(13459674-13459749)
chr8 (147-235)||(20672733-20672823)
chr8 (125-255)||(1929990-1930129)
chr8 (205-267)||(8629499-8629561)
chr8 (195-298)||(30191073-30191178)
chr8 (191-252)||(10383914-10383975)
chr8 (214-308)||(16162812-16162908)
chr8 (191-244)||(41606891-41606944)
chr8 (191-267)||(778418-778494)
chr8 (201-253)||(779040-779092)
chr8 (191-255)||(2458543-2458607)
chr8 (201-253)||(3254264-3254316)
chr8 (122-158)||(9928192-9928228)
chr8 (191-267)||(30918142-30918217)
chr8 (122-162)||(32506993-32507033)
chr8 (191-267)||(37822624-37822699)
chr8 (194-249)||(9835883-9835938)
chr8 (125-164)||(12224991-12225030)
chr8 (125-164)||(26215435-26215474)
chr8 (228-267)||(26771332-26771371)
chr8 (129-164)||(26820142-26820177)
chr8 (125-164)||(29699193-29699232)
chr8 (194-268)||(34849135-34849210)
chr8 (204-267)||(41442418-41442481)
chr8 (125-164)||(42597340-42597379)
chr8 (191-261)||(2235627-2235697)
chr8 (193-235)||(3600735-3600777)
chr8 (122-164)||(4558734-4558776)
chr8 (191-306)||(6950351-6950468)
chr8 (225-267)||(11188120-11188162)
chr8 (125-163)||(11188248-11188286)
chr8 (193-235)||(14339602-14339644)
chr8 (122-164)||(40728510-40728552)
chr8 (191-298)||(44236755-44236864)
chr8 (122-163)||(3945210-3945251)
chr8 (131-164)||(4762456-4762489)
chr8 (194-254)||(9956791-9956852)
chr8 (194-247)||(30389131-30389184)
chr8 (227-268)||(31716190-31716231)
chr8 (223-267)||(2487973-2488017)
chr8 (201-257)||(4390252-4390308)
chr8 (194-254)||(7111300-7111360)
chr8 (125-165)||(7714181-7714221)
chr8 (191-267)||(9700030-9700106)
chr8 (201-265)||(11770978-11771042)
chr8 (201-267)||(28763406-28763474)
chr8 (227-267)||(29168021-29168061)
chr8 (209-249)||(30947446-30947486)
chr8 (194-261)||(33808335-33808403)
chr8 (191-308)||(39551131-39551250)
[»] chr5 (50 HSPs)
chr5 (169-298)||(2568665-2568796)
chr5 (168-254)||(13604827-13604913)
chr5 (195-262)||(499701-499768)
chr5 (171-254)||(10125696-10125779)
chr5 (192-267)||(35963271-35963346)
chr5 (206-267)||(39248143-39248204)
chr5 (191-267)||(12459966-12460042)
chr5 (191-255)||(17258860-17258924)
chr5 (191-238)||(33533533-33533580)
chr5 (168-267)||(21768160-21768261)
chr5 (194-267)||(29925873-29925947)
chr5 (122-164)||(35135754-35135796)
chr5 (166-263)||(4619711-4619808)
chr5 (195-267)||(3977341-3977413)
chr5 (231-308)||(11104974-11105053)
chr5 (168-248)||(36638753-36638833)
chr5 (125-164)||(7096219-7096258)
chr5 (191-254)||(11707084-11707147)
chr5 (125-164)||(12407753-12407792)
chr5 (191-254)||(15003492-15003555)
chr5 (201-268)||(15405976-15406043)
chr5 (228-267)||(16457943-16457982)
chr5 (125-164)||(29117022-29117061)
chr5 (125-164)||(33459027-33459066)
chr5 (125-164)||(40048372-40048411)
chr5 (201-266)||(1464985-1465051)
chr5 (125-163)||(13224368-13224406)
chr5 (191-261)||(34690902-34690972)
chr5 (169-267)||(37611180-37611278)
chr5 (169-267)||(37787910-37788008)
chr5 (191-253)||(41112877-41112939)
chr5 (125-162)||(12460094-12460131)
chr5 (169-254)||(17368683-17368768)
chr5 (125-158)||(18704133-18704166)
chr5 (201-242)||(33458925-33458966)
chr5 (125-162)||(34117627-34117664)
chr5 (186-267)||(37690601-37690682)
chr5 (166-267)||(38033992-38034093)
chr5 (195-243)||(1899187-1899235)
chr5 (191-235)||(3504773-3504817)
chr5 (201-268)||(7808544-7808612)
chr5 (195-267)||(18857363-18857435)
chr5 (201-245)||(29281178-29281222)
chr5 (191-267)||(37526164-37526240)
chr5 (122-158)||(38033904-38033940)
chr5 (191-263)||(38104826-38104898)
chr5 (191-263)||(40534228-40534300)
chr5 (225-265)||(40769737-40769777)
chr5 (194-242)||(41957441-41957489)
chr5 (211-262)||(42583311-42583363)
[»] chr4 (55 HSPs)
chr4 (191-263)||(1137741-1137813)
chr4 (169-308)||(50742760-50742899)
chr4 (191-254)||(28300277-28300340)
chr4 (201-263)||(25571299-25571361)
chr4 (122-235)||(35743240-35743355)
chr4 (194-265)||(23459660-23459731)
chr4 (192-267)||(42461281-42461356)
chr4 (122-267)||(21043200-21043348)
chr4 (186-267)||(27123317-27123398)
chr4 (195-252)||(48719371-48719428)
chr4 (169-268)||(2996580-2996679)
chr4 (168-251)||(7693992-7694074)
chr4 (201-248)||(17223020-17223067)
chr4 (225-264)||(39063608-39063647)
chr4 (201-268)||(39178230-39178297)
chr4 (201-308)||(7367976-7368085)
chr4 (204-254)||(37863932-37863982)
chr4 (122-164)||(51044551-51044593)
chr4 (195-263)||(3176073-3176141)
chr4 (191-267)||(23819118-23819194)
chr4 (211-308)||(28615384-28615482)
chr4 (203-263)||(39886622-39886682)
chr4 (124-163)||(3176215-3176254)
chr4 (209-277)||(4071925-4071995)
chr4 (125-220)||(4191678-4191776)
chr4 (125-164)||(6364088-6364127)
chr4 (196-247)||(8469362-8469413)
chr4 (125-164)||(19422357-19422396)
chr4 (125-164)||(30024639-30024678)
chr4 (201-267)||(49202684-49202751)
chr4 (201-267)||(50662702-50662769)
chr4 (166-220)||(18628555-18628609)
chr4 (201-263)||(46401303-46401365)
chr4 (196-229)||(10192317-10192350)
chr4 (171-267)||(22666498-22666595)
chr4 (125-162)||(24936249-24936286)
chr4 (125-162)||(28623228-28623265)
chr4 (123-164)||(44119254-44119295)
chr4 (196-249)||(46090797-46090850)
chr4 (195-267)||(50681053-50681126)
chr4 (123-160)||(52645845-52645882)
chr4 (201-249)||(1965980-1966028)
chr4 (191-267)||(6987706-6987782)
chr4 (227-267)||(17822829-17822869)
chr4 (195-251)||(20936210-20936266)
chr4 (235-267)||(22471347-22471379)
chr4 (227-267)||(22662076-22662116)
chr4 (227-267)||(25434451-25434491)
chr4 (231-267)||(29774310-29774346)
chr4 (195-227)||(40613238-40613270)
chr4 (122-162)||(42641727-42641767)
chr4 (191-235)||(46019626-46019670)
chr4 (195-263)||(49219172-49219240)
chr4 (223-267)||(52172786-52172830)
chr4 (128-164)||(54325129-54325165)
[»] chr2 (58 HSPs)
chr2 (191-265)||(28677626-28677700)
chr2 (169-267)||(40158725-40158823)
chr2 (191-305)||(8820217-8820333)
chr2 (191-259)||(1647265-1647333)
chr2 (191-267)||(12313138-12313214)
chr2 (191-263)||(41817197-41817269)
chr2 (169-256)||(35378992-35379079)
chr2 (104-162)||(10150673-10150731)
chr2 (203-308)||(787373-787480)
chr2 (191-267)||(32106764-32106840)
chr2 (192-256)||(35378508-35378572)
chr2 (191-304)||(43529784-43529899)
chr2 (191-238)||(16867768-16867815)
chr2 (125-265)||(32098297-32098439)
chr2 (196-255)||(43530088-43530147)
chr2 (104-264)||(44606078-44606240)
chr2 (209-267)||(5902514-5902572)
chr2 (189-263)||(13220460-13220534)
chr2 (125-163)||(24141742-24141780)
chr2 (191-261)||(38809355-38809425)
chr2 (192-287)||(39621981-39622078)
chr2 (194-267)||(40682359-40682433)
chr2 (201-263)||(43827922-43827984)
chr2 (166-255)||(8017438-8017527)
chr2 (166-267)||(8187418-8187519)
chr2 (211-268)||(11892093-11892150)
chr2 (211-268)||(11897759-11897816)
chr2 (169-254)||(43065428-43065513)
chr2 (203-267)||(33192243-33192306)
chr2 (124-164)||(40672888-40672928)
chr2 (191-251)||(43717117-43717177)
chr2 (168-276)||(44438795-44438903)
chr2 (218-261)||(1801724-1801767)
chr2 (125-164)||(5133711-5133750)
chr2 (125-160)||(10143111-10143146)
chr2 (168-243)||(29316764-29316839)
chr2 (130-164)||(1939424-1939458)
chr2 (122-164)||(5045249-5045291)
chr2 (192-266)||(11063518-11063592)
chr2 (122-164)||(13864586-13864628)
chr2 (126-164)||(15173466-15173504)
chr2 (225-267)||(32837386-32837428)
chr2 (122-160)||(38239647-38239685)
chr2 (166-235)||(1939329-1939398)
chr2 (195-252)||(2964789-2964846)
chr2 (168-268)||(26143603-26143704)
chr2 (227-268)||(42419859-42419900)
chr2 (226-287)||(44786375-44786436)
chr2 (223-276)||(4350751-4350806)
chr2 (191-267)||(10567086-10567162)
chr2 (225-314)||(28803446-28803537)
chr2 (194-254)||(31096333-31096393)
chr2 (125-165)||(34054992-34055032)
chr2 (191-235)||(34652033-34652077)
chr2 (128-164)||(39567845-39567881)
chr2 (168-244)||(42621363-42621439)
chr2 (128-164)||(43199356-43199392)
chr2 (125-161)||(44443259-44443295)
[»] chr3 (67 HSPs)
chr3 (166-267)||(37273138-37273239)
chr3 (185-305)||(24281070-24281192)
chr3 (182-268)||(21574510-21574596)
chr3 (209-308)||(45541618-45541719)
chr3 (194-251)||(5391911-5391968)
chr3 (191-267)||(47513682-47513758)
chr3 (191-267)||(20194998-20195073)
chr3 (169-264)||(21367674-21367770)
chr3 (201-245)||(38971297-38971341)
chr3 (201-265)||(53762361-53762425)
chr3 (194-249)||(39602193-39602248)
chr3 (192-259)||(42745068-42745135)
chr3 (192-247)||(43116426-43116481)
chr3 (122-164)||(24605108-24605150)
chr3 (194-267)||(39980761-39980835)
chr3 (201-267)||(40880913-40880979)
chr3 (192-266)||(54837000-54837074)
chr3 (123-164)||(2128343-2128384)
chr3 (191-248)||(2152162-2152219)
chr3 (182-235)||(3044256-3044309)
chr3 (194-267)||(24603717-24603790)
chr3 (122-163)||(32703074-32703115)
chr3 (214-308)||(44014720-44014816)
chr3 (209-254)||(44747152-44747197)
chr3 (195-267)||(23808029-23808101)
chr3 (191-235)||(25925771-25925815)
chr3 (201-261)||(29427616-29427676)
chr3 (203-267)||(34707461-34707525)
chr3 (191-235)||(45432936-45432980)
chr3 (195-263)||(53952081-53952149)
chr3 (192-267)||(26330288-26330363)
chr3 (202-253)||(39723219-39723270)
chr3 (216-267)||(43046720-43046771)
chr3 (125-164)||(48364971-48365010)
chr3 (194-261)||(52440633-52440700)
chr3 (204-265)||(402508-402570)
chr3 (126-164)||(1395611-1395649)
chr3 (125-163)||(16790181-16790219)
chr3 (126-164)||(36189506-36189544)
chr3 (122-164)||(37788797-37788838)
chr3 (201-276)||(41644399-41644476)
chr3 (131-164)||(10101568-10101601)
chr3 (131-164)||(10212493-10212526)
chr3 (125-162)||(20173982-20174019)
chr3 (169-254)||(30573892-30573977)
chr3 (195-267)||(31365152-31365225)
chr3 (201-265)||(31403397-31403462)
chr3 (127-164)||(33882969-33883006)
chr3 (191-244)||(36101597-36101650)
chr3 (191-244)||(36139907-36139960)
chr3 (127-160)||(36887463-36887496)
chr3 (227-267)||(22203496-22203535)
chr3 (128-164)||(24235775-24235811)
chr3 (191-235)||(24785234-24785278)
chr3 (201-265)||(27896137-27896201)
chr3 (122-162)||(30669064-30669104)
chr3 (122-158)||(32663578-32663614)
chr3 (191-263)||(33880526-33880597)
chr3 (194-234)||(33883748-33883788)
chr3 (124-164)||(36445670-36445710)
chr3 (223-267)||(36769936-36769980)
chr3 (211-251)||(39723381-39723421)
chr3 (169-233)||(40665436-40665500)
chr3 (169-233)||(48048981-48049045)
chr3 (191-267)||(50952362-50952438)
chr3 (169-261)||(51130757-51130849)
chr3 (132-164)||(54775074-54775106)
[»] chr7 (59 HSPs)
chr7 (125-242)||(7244641-7244760)
chr7 (191-267)||(20553132-20553208)
chr7 (166-308)||(25596037-25596180)
chr7 (191-250)||(43250681-43250740)
chr7 (196-266)||(30535597-30535667)
chr7 (191-268)||(46082065-46082142)
chr7 (223-267)||(946789-946833)
chr7 (125-164)||(21853208-21853247)
chr7 (125-163)||(1432060-1432098)
chr7 (195-253)||(15740390-15740448)
chr7 (122-164)||(23918893-23918935)
chr7 (201-267)||(33894666-33894732)
chr7 (191-305)||(1422918-1423034)
chr7 (166-267)||(9038116-9038216)
chr7 (186-267)||(22387861-22387942)
chr7 (201-266)||(28727729-28727794)
chr7 (191-267)||(25670551-25670627)
chr7 (228-267)||(420427-420466)
chr7 (201-248)||(9423578-9423625)
chr7 (195-253)||(15740534-15740593)
chr7 (201-267)||(20526485-20526552)
chr7 (191-274)||(22551363-22551446)
chr7 (192-243)||(25511656-25511707)
chr7 (125-177)||(27378905-27378958)
chr7 (122-161)||(35808999-35809038)
chr7 (202-253)||(43219623-43219674)
chr7 (194-267)||(19022549-19022623)
chr7 (113-163)||(20476603-20476653)
chr7 (194-267)||(21568459-21568533)
chr7 (192-242)||(29286821-29286871)
chr7 (225-267)||(29574590-29574632)
chr7 (130-164)||(39591559-39591593)
chr7 (201-254)||(39967959-39968013)
chr7 (126-164)||(44241800-44241838)
chr7 (104-165)||(2727451-2727512)
chr7 (122-176)||(2894753-2894809)
chr7 (185-287)||(28165114-28165218)
chr7 (127-164)||(28178910-28178947)
chr7 (201-254)||(30496744-30496797)
chr7 (125-162)||(33894562-33894599)
chr7 (201-253)||(34035956-34036009)
chr7 (194-267)||(39345503-39345576)
chr7 (166-263)||(44615073-44615170)
chr7 (123-164)||(48157212-48157253)
chr7 (122-158)||(2223084-2223120)
chr7 (127-163)||(3968288-3968324)
chr7 (122-162)||(4591478-4591518)
chr7 (191-267)||(4966185-4966261)
chr7 (202-254)||(6857317-6857369)
chr7 (123-167)||(22759123-22759167)
chr7 (191-308)||(28520934-28521053)
chr7 (201-267)||(35007636-35007699)
chr7 (211-267)||(36537957-36538013)
chr7 (191-267)||(39334222-39334298)
chr7 (202-266)||(39566173-39566237)
chr7 (128-164)||(43152994-43153030)
chr7 (211-251)||(43219785-43219825)
chr7 (107-163)||(47528026-47528082)
chr7 (124-164)||(49060478-49060518)
[»] chr1 (84 HSPs)
chr1 (191-308)||(10199330-10199449)
chr1 (185-252)||(35925713-35925780)
chr1 (168-254)||(37811858-37811944)
chr1 (209-267)||(38001643-38001701)
chr1 (202-262)||(4549888-4549948)
chr1 (191-267)||(31517705-31517781)
chr1 (191-267)||(38170655-38170731)
chr1 (168-267)||(2777898-2777997)
chr1 (168-242)||(27140484-27140558)
chr1 (122-164)||(48830168-48830210)
chr1 (192-306)||(28689376-28689492)
chr1 (191-267)||(4445737-4445813)
chr1 (191-308)||(6292522-6292640)
chr1 (171-259)||(43338125-43338213)
chr1 (192-247)||(11695891-11695946)
chr1 (185-297)||(32515374-32515488)
chr1 (203-308)||(172495-172605)
chr1 (194-264)||(4576837-4576907)
chr1 (195-253)||(14443482-14443540)
chr1 (122-164)||(15360830-15360872)
chr1 (191-249)||(25479610-25479668)
chr1 (191-265)||(37593651-37593725)
chr1 (194-267)||(41184614-41184688)
chr1 (122-164)||(49517006-49517048)
chr1 (192-265)||(4549260-4549333)
chr1 (191-268)||(11639380-11639457)
chr1 (194-251)||(31118075-31118132)
chr1 (195-267)||(35669005-35669075)
chr1 (191-248)||(39596626-39596682)
chr1 (192-267)||(4920734-4920810)
chr1 (191-267)||(6262049-6262125)
chr1 (122-162)||(27140421-27140461)
chr1 (191-267)||(33108587-33108663)
chr1 (128-164)||(49557083-49557119)
chr1 (228-267)||(2295163-2295202)
chr1 (192-267)||(29007681-29007756)
chr1 (192-267)||(33723347-33723422)
chr1 (125-164)||(36641814-36641853)
chr1 (168-255)||(39270402-39270489)
chr1 (125-164)||(50319231-50319270)
chr1 (122-164)||(4200165-4200207)
chr1 (194-267)||(7941638-7941712)
chr1 (191-253)||(12481532-12481594)
chr1 (122-164)||(16982028-16982070)
chr1 (125-163)||(23895275-23895313)
chr1 (194-268)||(26779890-26779963)
chr1 (201-267)||(30257722-30257788)
chr1 (191-241)||(36151496-36151546)
chr1 (201-235)||(47917275-47917309)
chr1 (201-267)||(48536655-48536721)
chr1 (194-267)||(49938779-49938853)
chr1 (194-262)||(3887601-3887670)
chr1 (194-298)||(5591899-5592004)
chr1 (192-261)||(6031445-6031514)
chr1 (168-253)||(7136977-7137062)
chr1 (201-254)||(29635386-29635439)
chr1 (194-255)||(34290268-34290329)
chr1 (238-267)||(36070257-36070286)
chr1 (194-254)||(38503442-38503503)
chr1 (194-262)||(38882881-38882950)
chr1 (195-267)||(45975723-45975796)
chr1 (195-251)||(3924657-3924713)
chr1 (191-235)||(5276322-5276366)
chr1 (228-264)||(5720992-5721028)
chr1 (196-267)||(11941296-11941368)
chr1 (193-245)||(12641743-12641795)
chr1 (225-265)||(12763386-12763426)
chr1 (132-164)||(14737797-14737829)
chr1 (201-265)||(17420242-17420306)
chr1 (201-253)||(23409822-23409874)
chr1 (124-164)||(25707098-25707138)
chr1 (191-267)||(28935841-28935917)
chr1 (122-162)||(33186051-33186091)
chr1 (191-235)||(35017605-35017649)
chr1 (124-164)||(36151597-36151637)
chr1 (122-162)||(37593763-37593803)
chr1 (191-255)||(38247030-38247094)
chr1 (211-267)||(41638273-41638329)
chr1 (127-163)||(42556724-42556760)
chr1 (191-235)||(46252679-46252723)
chr1 (194-261)||(47498809-47498877)
chr1 (192-236)||(47877139-47877183)
chr1 (191-263)||(48748285-48748356)
chr1 (227-263)||(51929431-51929467)
[»] chr6 (61 HSPs)
chr6 (195-253)||(31624123-31624181)
chr6 (191-265)||(34403884-34403958)
chr6 (166-267)||(769143-769243)
chr6 (186-267)||(2460116-2460197)
chr6 (166-267)||(33089510-33089611)
chr6 (193-254)||(33887861-33887922)
chr6 (191-259)||(7931699-7931767)
chr6 (124-164)||(24836291-24836331)
chr6 (192-268)||(31583709-31583785)
chr6 (196-268)||(33832237-33832309)
chr6 (194-265)||(20368147-20368218)
chr6 (168-276)||(32171337-32171447)
chr6 (194-264)||(34882388-34882459)
chr6 (195-253)||(1575928-1575986)
chr6 (122-160)||(5554861-5554899)
chr6 (192-266)||(8035114-8035188)
chr6 (125-162)||(33068655-33068692)
chr6 (191-304)||(2455839-2455954)
chr6 (191-235)||(6536976-6537020)
chr6 (191-235)||(6647416-6647460)
chr6 (194-268)||(9559502-9559580)
chr6 (191-235)||(13908492-13908536)
chr6 (201-253)||(17770593-17770645)
chr6 (124-164)||(34544542-34544582)
chr6 (125-164)||(507159-507198)
chr6 (202-253)||(696642-696693)
chr6 (195-253)||(1575783-1575842)
chr6 (201-248)||(4080955-4081002)
chr6 (194-264)||(9912158-9912229)
chr6 (171-230)||(17241254-17241313)
chr6 (128-163)||(31672012-31672047)
chr6 (196-246)||(5566163-5566213)
chr6 (125-163)||(9559634-9559672)
chr6 (201-267)||(10476087-10476153)
chr6 (209-255)||(10657449-10657495)
chr6 (191-249)||(28641732-28641790)
chr6 (122-164)||(32975914-32975956)
chr6 (194-267)||(33500445-33500519)
chr6 (121-163)||(33500574-33500616)
chr6 (110-164)||(34429782-34429836)
chr6 (166-267)||(3738073-3738174)
chr6 (209-287)||(5731616-5731696)
chr6 (209-262)||(10616683-10616736)
chr6 (168-249)||(32386089-32386170)
chr6 (125-162)||(32861456-32861493)
chr6 (122-159)||(33116541-33116578)
chr6 (191-264)||(35070435-35070508)
chr6 (211-251)||(696491-696531)
chr6 (168-267)||(1275155-1275255)
chr6 (128-164)||(2206532-2206568)
chr6 (124-164)||(4420555-4420595)
chr6 (191-235)||(4420672-4420716)
chr6 (132-164)||(5328920-5328952)
chr6 (191-235)||(9027607-9027651)
chr6 (191-235)||(9667982-9668026)
chr6 (191-255)||(10616518-10616582)
chr6 (194-254)||(21024243-21024303)
chr6 (191-247)||(27909623-27909679)
chr6 (128-164)||(28531633-28531669)
chr6 (169-217)||(32386578-32386626)
chr6 (195-263)||(34939777-34939845)
[»] scaffold0590 (1 HSPs)
scaffold0590 (125-164)||(1166-1205)
[»] scaffold0275 (1 HSPs)
scaffold0275 (125-164)||(2770-2809)
[»] scaffold0024 (1 HSPs)
scaffold0024 (125-164)||(27515-27554)
[»] scaffold0019 (1 HSPs)
scaffold0019 (125-162)||(104228-104265)
[»] scaffold0100 (1 HSPs)
scaffold0100 (125-161)||(42556-42592)
[»] scaffold0057 (1 HSPs)
scaffold0057 (227-267)||(24687-24727)
[»] scaffold0004 (1 HSPs)
scaffold0004 (201-253)||(98619-98671)


Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 323
Target Start/End: Original strand, 10939239 - 10939538
Alignment:
Q  14 ttcttacaccttttataatacatactgtgtagagtttgacatcatttagattaacaactcaattcagcgcttacttacaagttataacacaagcacttat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||     ||||||||||||||||||||||    
T  10939239 ttcttacaccttttataatacatactgtgtagagtttgacatcgtttaggtaaacaacttaattcagcgcttat----aagttataacacaagcacttat 10939334  T
Q  114 tatactactgtttatgtataagttatttctattacaaaagataaaataaaggaactgttttcattagttaacatggggagcttatgcaaataagttgaaa 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  10939335 tatactactgtttatgtataagttatttctattacaaaagataaaataaaggaactgttttcattagttatca-ggggagcttatgcaaataagttgaaa 10939433  T
Q  214 acaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggtagatagactcaaataattcaatccaagta 311  Q
    |||||||||       | |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  10939434 acaacttac-------ttataaactgttttcataagttctcctaaacagtctcagaagtgcttatacaggtagataaactcaaataattcaatccaagta 10939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 11569521 - 11569422
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||||| || || ||||| ||| || || ||||||| ||||||||||||| | ||||||||||| |||||| |||||| |||| ||||||||||||    
T  11569521 ctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctca 11569422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 27754433 - 27754509
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||  |||||||  | |||||||||||||||||||||||||||||| ||| |||||||    
T  27754433 gagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaatagtctca 27754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 32841022 - 32840951
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||| ||||||| ||||||||||||| ||||| ||||||||  |||||||||||||||||| ||||||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctc 32840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 11185228 - 11185322
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||| |||| || ||||| ||||| ||| ||||||||||||||||||||| |||||||| ||||  ||||| || ||| |||| ||||||||    
T  11185228 tgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgttataagatgtttccaaaagatctcataaacagt 11185322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 12851205 - 12851279
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||| |||||||  ||||||| |||| |||||||| |||| ||||||||||||||| ||| |||||||||    
T  12851205 gagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaacagtct 12851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 267
Target Start/End: Original strand, 14949827 - 14949971
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttac 222  Q
    ||||||||||| || |||||| ||||||||||||||| ||   |||| ||||||| || || | |   ||| ||||  ||||||| |||||||| ||||     
T  14949827 ttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcataagctatcctaaagagattatagaaataagctgaaaacagcttat 14949926  T
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    | |||||||||||  | |||||||||| |||||||||||||||||    
T  14949927 ggacatgtcataagttattttcataagctctcctaaacagtctca 14949971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 35644029 - 35643952
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||||||||| | |||| ||| || |||||||||| |||||||||||| ||| |||||||||||    
T  35644029 gagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctca 35643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 5088881 - 5088957
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||  |||||||||||||||| |||| | |||||| ||||||||||| |||||| ||||| | |||||||||    
T  5088881 gagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccataagctctccaagacagtctca 5088957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 7918487 - 7918412
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    ||||||||  |||||||||| ||||| |||| ||||||||| |||  |||||||||||| ||||| ||||||||||    
T  7918487 gagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 13459674 - 13459749
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    ||||||||| ||||| | ||||||||  ||| ||| ||||||||| |||||||||||||||||||| || ||||||    
T  13459674 gagcttatgaaaataggctgaaaacagtttatgaaaatgtcataagctgttttcataagttctcctgaaaagtctc 13459749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 20672733 - 20672823
Alignment:
Q  147 acaaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||||||||||||   ||||||||| || || || | ||| ||||||||| ||||||| |||||||| |||| |||||||||||||    
T  20672733 acaaaagataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataa 20672823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 1929990 - 1930129
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaaggaact--------gttttcattagttaacatggggagcttatgcaaataagttgaaaaca 216  Q
    |||||||||||||||||||||   ||||||||||||||||  |||        |||||||| || || | ||| || ||| || ||||||| ||||||||    
T  1929990 ttatgtataagttatttctatagaaaaagataaaataaagttacttataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaaca 1930089  T
Q  217 acttacgaaca-tgtcataaactgttttcataagttctcc 255  Q
     |||| ||||| |||||||||||||||||| |||||||||    
T  1930090 gcttatgaacaatgtcataaactgttttcacaagttctcc 1930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 8629499 - 8629561
Alignment:
Q  205 aagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||||  |||| ||||||    
T  8629499 aagttgaaaacaacttatgatcatgtcataagttgttttcataagttctctcaaacggtctca 8629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 30191178 - 30191073
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactc 292  Q
    ||||| ||||||| ||||||||| ||  |||||||||||||  ||||| |||||| ||||| |||||||||  ||||||||||| |   |||||| ||||    
T  30191178 ttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactc 30191079  T
Q  293 aaataa 298  Q
    ||||||    
T  30191078 aaataa 30191073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 10383914 - 10383975
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttc 252  Q
    ||||||||| ||||||| || ||||| |||| ||| ||||||||| ||||||||||||||||    
T  10383914 gagcttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 16162812 - 16162908
Alignment:
Q  214 acaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    |||||||| ||||| ||||||| ||||||||||||||| ||  |||||||||  |||||| |||| |  ||||||| ||||||||||  ||||||||    
T  16162812 acaacttatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaa 16162908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 41606944 - 41606891
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttc 244  Q
    ||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||||    
T  41606944 gagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttttc 41606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 778418 - 778494
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| || ||||||||||||||||||| ||| |||| ||   ||||||||||||||||   |||||||||||    
T  778418 gagcttatgaaagtaagttgaaaacaacttacaaacgtgtcttatgttgttttcataagttcttgcaaacagtctca 778494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 779092 - 779040
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||| ||||||||||||| |||||||||||||  ||||||| ||||||||    
T  779092 aaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaagttct 779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 2458607 - 2458543
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    ||||||||| ||||||  |||||||| |||| ||||||| ||||| |||| ||||||||||||||    
T  2458607 gagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttctcc 2458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 3254264 - 3254316
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||| |||||||| |||| ||||||||||||| |||||||| ||||||||    
T  3254264 aaataagctgaaaacagcttatgaacatgtcataagctgttttcttaagttct 3254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 9928192 - 9928228
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaa 158  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9928192 tgtttatgtataagttatttctataacaaaagataaa 9928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 30918142 - 30918217
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||| ||  |||||||||||| ||||  |||||||||||    
T  30918142 gagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaacagtctca 30918217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 32506993 - 32507033
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  32506993 tgtttatgtataagttatttctacaacaaaagataaaataa 32507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 37822699 - 37822624
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||| ||||||||||||| ||||| ||||||| |||||| |||| || ||  |||||||||||    
T  37822699 gagcttatgaaaataagt-gaaaacaacttacaaacatatcataaattgttttaataaattttctcaaacagtctca 37822624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 9835938 - 9835883
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    |||||| ||||||| |||||||| |||| ||||||||||||| |||||| ||||||    
T  9835938 cttatggaaataagatgaaaacagcttatgaacatgtcataagctgtttacataag 9835883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 12225030 - 12224991
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaag 12224991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 26215435 - 26215474
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaag 26215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 26771332 - 26771371
Alignment:
Q  228 tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  26771332 tgtcataagctgttttcataagttctcccaaacagtctca 26771371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 26820142 - 26820177
Alignment:
Q  129 gtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaag 26820177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 29699193 - 29699232
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  29699193 ttatgtacaagttatttctataacaaaagataaaataaag 29699232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 34849135 - 34849210
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaact-gttttcataagttctcctaaacagtctcaa 268  Q
    |||||| |||| || |||||||  |||| |||||||||||||| | |||||||| |||||||| ||||||||||||    
T  34849135 cttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagttctcccaaacagtctcaa 34849210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 41442481 - 41442418
Alignment:
Q  204 taagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| |||||||| | || |||||||||||||| ||||||||||||||||   |||||||||||    
T  41442481 taagctgaaaacagcatatgaacatgtcataaattgttttcataagttctgtcaaacagtctca 41442418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 42597340 - 42597379
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaag 42597379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 2235697 - 2235627
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    ||||||||| |||| || | ||||| ||||| |||||||||||||||| |||||||| ||| | |||||||    
T  2235697 gagcttatggaaatgagctaaaaacgacttatgaacatgtcataaactattttcatatgttttgctaaaca 2235627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 3600777 - 3600735
Alignment:
Q  193 gcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||| ||||||||||||||||||||| | |||||||||||    
T  3600777 gcttatgaaaataagttgaaaacaacttatggacatgtcataa 3600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 4558734 - 4558776
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  4558734 tgtttatgtataagctatttctataataaaagataaaataaag 4558776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 6950351 - 6950468
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatag 288  Q
    ||||||||| ||||||| |||||||||||||   ||||||||||   ||||| |||||| ||||| ||||| |||  ||| || |||| |  |||||||     
T  6950351 gagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataa 6950450  T
Q  289 actcaaataattcaatcc 306  Q
    |||||||||| |||||||    
T  6950451 actcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 11188162 - 11188120
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  11188162 acatgtcataagctgttttcattagttatcctaaacagtctca 11188120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 11188286 - 11188248
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  11188286 ttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 14339644 - 14339602
Alignment:
Q  193 gcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||| ||||||||||||||||||||| | |||||||||||    
T  14339644 gcttatgaaaataagttgaaaacaacttatggacatgtcataa 14339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 40728552 - 40728510
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||    
T  40728552 tgttcatgcataagttatttctataacaaaagataaaataaag 40728510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 44236864 - 44236755
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca--agtgcttatacaggtagatag 288  Q
    ||||||||| ||||||| |||||| |||||| || |||||| | | || ||||||||  ||||||  ||||||||||  ||||||||| |  |||||||     
T  44236864 gagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcacaagtgcttatgccagtagataa 44236765  T
Q  289 actcaaataa 298  Q
    ||||||||||    
T  44236764 actcaaataa 44236755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 3945210 - 3945251
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||| ||||||||||||| || |||||||||||||||||    
T  3945210 tgtttatatataagttatttcaataacaaaagataaaataaa 3945251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 4762456 - 4762489
Alignment:
Q  131 ataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||||||| ||||||||    
T  4762456 ataagttatttctattacaaaagatgaaataaag 4762489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 9956852 - 9956791
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctc 254  Q
    |||||| ||||||| ||||||| ||||| ||||| || |||||||| |||||||||||||||    
T  9956852 cttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagttctc 9956791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 30389131 - 30389184
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcata 247  Q
    |||||| ||||||| ||||||||||||| ||||||||||| | || ||||||||    
T  30389131 cttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcata 30389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 31716231 - 31716190
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||    
T  31716231 atgtcataagctgttttcaaaagttctccgaaacagtctcaa 31716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 2488017 - 2487973
Alignment:
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||  |||||||||||||||||| |||||||||||    
T  2488017 gaacatgttataagttgttttcataagttctcccaaacagtctca 2487973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 4390252 - 4390308
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctccta 257  Q
    |||||||  |||||||||||| ||||||| |||||  ||||||||||| ||||||||    
T  4390252 aaataaggggaaaacaacttatgaacatgccataagttgttttcataaattctccta 4390308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 7111300 - 7111360
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||| ||||||| | |||||| |||||||| ||||||| || |||||||||||| ||||    
T  7111300 cttatgaaaataagctaaaaacagcttacgaatatgtcatcaattgttttcataagctctc 7111360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 7714181 - 7714221
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaagg 165  Q
    ||||||||||||||  ||||| |||||||||||||||||||    
T  7714181 ttatgtataagttacatctataacaaaagataaaataaagg 7714221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 9700030 - 9700106
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| |||||||| |||| | |||||||||||| || ||||| ||| ||||  ||| |||||||    
T  9700030 gagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctca 9700106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 11771042 - 11770978
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||||||||| ||   |||| ||||||  ||||||||||||||||  ||||||||||    
T  11771042 aaataagttgaaaacaacgtatagacatatcataagttgttttcataagttcttttaaacagtct 11770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 28763406 - 28763474
Alignment:
Q  201 aaataagttgaaaacaa-cttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||||||||| || |||| ||| || || |||| ||||||||||||||||||| |||||||||||    
T  28763406 aaataagttgaaaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctca 28763474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 29168061 - 29168021
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||||||||| |||||||||||    
T  29168061 atgtcataatctgtttttataagttctcccaaacagtctca 29168021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 30947486 - 30947446
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  30947486 tgaaaataacttttgaacatgtcataaactgttttcataag 30947446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 33808335 - 33808403
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaaca 261  Q
    |||||| ||||||| | ||||||||||| ||||| | |||||| || |||||||||||||||| |||||    
T  33808335 cttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaaca 33808403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 39551250 - 39551131
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag--tctcaagtgcttatacaggtagatag 288  Q
    ||||||||  ||||||||| |||||| |||  | |||||||||||  ||||| ||||| |||||| ||||||  || ||| ||||||||   |||||||     
T  39551250 gagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacagtttcacaaatgcttatatccgtagataa 39551151  T
Q  289 actcaaataattcaatccaa 308  Q
     ||||||||| |||||||||    
T  39551150 tctcaaataagtcaatccaa 39551131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 298
Target Start/End: Original strand, 2568665 - 2568796
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag--tctc 266  Q
    ||||||||| || || ||||| ||||| ||| ||||||| | |||| |||||| ||| ||||||||| ||||||||||||||||| ||||||||  ||||    
T  2568665 tgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttcttctaaacagtctctc 2568764  T
Q  267 aagtgcttatacaggtagatagactcaaataa 298  Q
    ||||||||| ||  |||||||  |||||||||    
T  2568765 aagtgcttacaccagtagataagctcaaataa 2568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 13604913 - 13604827
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||||||| ||||| | ||  ||||||||| |||||||||||||||||| || | ||||||||||| ||||||||||||| ||||    
T  13604913 ctgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctc 13604827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 499768 - 499701
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag 262  Q
    ||||| ||||||| ||||||||||||   |||||||||||| ||||||||||||||||||| ||||||    
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacag 499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 10125779 - 10125696
Alignment:
Q  171 ttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||| ||||| ||||| ||||||||| ||||||| |||||||| ||||  ||||||||||||  ||||| |||||||||||    
T  10125779 ttttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctc 10125696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 35963271 - 35963346
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||| ||||||||||||| | ||||||||||  || ||| ||||||||||||||||||| ||||    
T  35963271 agcttatggaaataagctgaaaacaacttatggacatgtcatacgctatttccataagttctcctaaacagactca 35963346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 39248143 - 39248204
Alignment:
Q  206 agttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||| |||| ||||| ||||||| ||||||| ||||||||||| |||||||||||    
T  39248143 agttgaaaacagcttatgaacaagtcataagctgtttttataagttctcccaaacagtctca 39248204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 12460042 - 12459966
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||   |||||||| || |||||||||||||  |||||||||| ||||||| |||||||||||    
T  12460042 gagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaacagtctca 12459966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 17258924 - 17258860
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||||| || |||||||| |||||||    
T  17258924 gagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcc 17258860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 33533580 - 33533533
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaact 238  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  33533580 gagcttatggaaataagttgaaaacaacttatgaatatgtcataaact 33533533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 21768261 - 21768160
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag--ttctcctaaacagtct 265  Q
    |||||||||| ||||| | ||  ||||||| | |||||||||||||||| | || | ||||||||||| |||||||||||||   ||||||| |||||||    
T  21768261 ctgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataagctgttttcataagcactctcctagacagtct 21768162  T
Q  266 ca 267  Q
    ||    
T  21768161 ca 21768160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 29925873 - 29925947
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||||| |||  | |||||| ||||||| ||||||||||||||||||| |||| ||||||    
T  29925873 cttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctca 29925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 35135796 - 35135754
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  35135796 tgtttatgtataagatatttctataacaaaagataaaataaag 35135754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 4619711 - 4619808
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    |||||| ||||| || || ||||| || |||||| ||||||| ||||| || |||| ||||||||||| |  |||||||||||| ||||| |||||||    
T  4619711 aactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 3977341 - 3977413
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| ||||||| |||| ||| || | ||||||||||||| ||||||||||||||| | ||||||| |||||    
T  3977341 ttatgaaaataagctgaagacagctaaggaacatgtcataagctgttttcataagtttttctaaacaatctca 3977413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 11104974 - 11105053
Alignment:
Q  231 cataaactgttttcataagttctcctaaacag--tctcaagtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    ||||||||||||||||||||||||| ||| ||  || ||||||||||| | ||| ||||  ||||||||| |||||||||    
T  11104974 cataaactgttttcataagttctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaa 11105053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 36638753 - 36638833
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    |||||||||| ||||| | | | ||||||||| ||||||| |||||| | |||| |||||||||||| || ||||||||||    
T  36638753 ctgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcatacacagttttcataa 36638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 7096258 - 7096219
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  7096258 ttatgtataagctatttctataacaaaagataaaataaag 7096219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 11707084 - 11707147
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||| || ||||||| |||||||||||||  |||||||||||| || |||| ||||||||||    
T  11707084 gagcttttgaaaataagctgaaaacaacttataaacatgtcataatctattttgataagttctc 11707147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 12407792 - 12407753
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaag 12407753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 15003555 - 15003492
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||| |||||| | |||||||||||||||||||||| |||  ||||| | |||||||||    
T  15003555 gagcttatggaaataaatcgaaaacaacttacgaacatgtcgtaagttgtttccttaagttctc 15003492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 15406043 - 15405976
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||| ||||||||| |||| ||||||||||||| |||||||  |||||||| || ||| |||||||    
T  15406043 aaataaattgaaaacagcttatgaacatgtcataagctgttttggtaagttcttctgaaccgtctcaa 15405976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 16457982 - 16457943
Alignment:
Q  228 tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  16457982 tgtcataagctgttttcataagttctcccaaacagtctca 16457943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 29117061 - 29117022
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaaataaag 29117022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 33459066 - 33459027
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  33459066 ttatgtataagttatttctataacaaaagacaaaataaag 33459027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 40048411 - 40048372
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  40048411 ttatgtataagttgtttctataacaaaagataaaataaag 40048372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 1465051 - 1464985
Alignment:
Q  201 aaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    ||||||| ||||||||||||| || || || ||||| |||||||||||||||||||  |||||||||    
T  1465051 aaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctcccgaacagtctc 1464985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 13224368 - 13224406
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  13224368 ttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 34690902 - 34690972
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    ||||||||| |||||||| || ||||||||| | |||||||| ||  |||||| ||||| |||||||||||    
T  34690902 gagcttatggaaataagtcgataacaacttatggacatgtcacaatttgtttttataagctctcctaaaca 34690972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 37611278 - 37611180
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| || || | ||| ||||||||| ||||||  |||||||| |||| |||||||||| ||  |||||||||||| ||||  ||||| |||||    
T  37611278 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37611180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 37788008 - 37787910
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| || || | ||| ||||||||| ||||||  |||||||| |||| |||||||||| ||  |||||||||||| ||||  ||||| |||||    
T  37788008 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37787910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 41112939 - 41112877
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||||| |||||||  |||||||  |||||||||||||| || || ||||||||||||||    
T  41112939 gagcttatgaaaataagccgaaaacagattacgaacatgtcagaagctattttcataagttct 41112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 12460131 - 12460094
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataa 12460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 17368683 - 17368768
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||| || || | ||| ||| ||||| ||||||| |||||||  | || |||||||||||||  |||||||||||||||||    
T  17368683 tgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 18704166 - 18704133
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaa 158  Q
    ||||||||||||||||||||| ||||||||||||    
T  18704166 ttatgtataagttatttctataacaaaagataaa 18704133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 33458966 - 33458925
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttt 242  Q
    ||||||||||||| || |||||||||||||||||| ||||||    
T  33458966 aaataagttgaaagcagcttacgaacatgtcataacctgttt 33458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 34117664 - 34117627
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  34117664 ttatgtataagttatttctttaacaaaagataaaataa 34117627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 37690682 - 37690601
Alignment:
Q  186 atggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||||||| ||||||| |||||||| ||||  |||||||||||   ||| |||||||| ||||  |||||||||||    
T  37690682 atggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctca 37690601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 267
Target Start/End: Complemental strand, 38034093 - 38033992
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| ||||| | ||| |||  || | |||||||  | ||||||||||| |||||| ||||| ||||||| |||| |||| | |||||||||    
T  38034093 aactgttttcataagttatcttggagagtataagaaaataagccggaaacaacttacaaacatgccataagctgttttaataacttcttccaaacagtct 38033994  T
Q  266 ca 267  Q
    ||    
T  38033993 ca 38033992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 1899187 - 1899235
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgtttt 243  Q
    ||||| ||||||| ||||||||||||| | ||||||||||| |||||||    
T  1899187 ttatggaaataagctgaaaacaacttatgcacatgtcataagctgtttt 1899235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 3504773 - 3504817
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  3504773 gagcttatgtaaataagctgaaaacagcttacaaacatgtcataa 3504817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 7808544 - 7808612
Alignment:
Q  201 aaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||| |||||||| |||| ||||| ||| |||| || |||||||||| ||||| ||||||||||||    
T  7808544 aaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcaa 7808612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 18857435 - 18857363
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| || |||||| |||||| |||| ||||||||||| | |||||||||||| |||| |||| || |||||    
T  18857435 ttatgaaattaagttaaaaacagcttatgaacatgtcattagctgttttcataaattcttctaagcattctca 18857363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 29281178 - 29281222
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttca 245  Q
    |||||||||||||| |||||| |||||||||||||| | ||||||    
T  29281178 aaataagttgaaaagaacttatgaacatgtcataaattattttca 29281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 37526240 - 37526164
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| |||||||| ||||  |||||||||||   ||| |||||||| ||||  |||||||||||    
T  37526240 gagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagtctca 37526164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 38033904 - 38033940
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaa 158  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  38033904 tgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 38104898 - 38104826
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| ||||||| |||||||||||||  | || ||||||  |||||||  |||||||||| |||||||    
T  38104898 gagcttatggaaataagctgaaaacaacttataagcaagtcatagcctgtttttgtaagttctcccaaacagt 38104826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 40534228 - 40534300
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| || |||| ||||||| | ||| ||||||||||||| ||  || |||||| |||||||||||||    
T  40534228 gagcttatggaagtaagatgaaaactaattatgaacatgtcataagctacttccataagctctcctaaacagt 40534300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 40769777 - 40769737
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  40769777 acatggcataagctgttttcgtaagttctcctaaacagtct 40769737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 41957489 - 41957441
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttt 242  Q
    |||||| ||||||| ||||||||||||| | ||||||||||| ||||||    
T  41957489 cttatgaaaataagatgaaaacaacttatggacatgtcataagctgttt 41957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 42583363 - 42583311
Alignment:
Q  211 aaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacag 262  Q
    ||||||||||| ||||| ||| ||||||||||||||| |||||||| ||||||    
T  42583363 aaaacaacttatgaacaatgttataaactgttttcattagttctcccaaacag 42583311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 1137741 - 1137813
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  1137741 gagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagt 1137813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 308
Target Start/End: Complemental strand, 50742899 - 50742760
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--c 266  Q
    ||||||||| || || | ||| ||||||||| |||| |||||||||||   || ||||||||||| ||||||||||||||||||||  |||||||||  |    
T  50742899 tgttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 50742800  T
Q  267 aagtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    ||||||||||||| |   |||| ||||||||| |||||||||    
T  50742799 aagtgcttatacaag--aatagcctcaaataagtcaatccaa 50742760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 28300340 - 28300277
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||| |||||    
T  28300340 gagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataaattctc 28300277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 25571299 - 25571361
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||    
T  25571299 aaataagctgaaaacagcttatgaacatatcataaactgtttccataagttctcctaaacagt 25571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 35743240 - 35743355
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaact 219  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||  ||||  |||||| |  || ||||  ||| ||||| |||||||||| ||||||||    
T  35743240 tgttgatgtacaagttatttctataacaaaagataaaataaaggcaaactactttcataaactatcatgaagagtttatggaaataagttggaaacaact 35743339  T
Q  220 tacgaacatgtcataa 235  Q
    ||  ||||||||||||    
T  35743340 tataaacatgtcataa 35743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 23459660 - 23459731
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||| | |||||||||||| ||||||  |||||||||||| || |||||||||||||||| |||||||||    
T  23459660 cttatgaatataagttgaaaataacttattaacatgtcataagcttttttcataagttctccgaaacagtct 23459731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 42461281 - 42461356
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||| ||||| ||||||| ||||| ||||||  || |||||||||||||||| |||||||||||    
T  42461281 agcttatgaaaataagctgaaatcaacttatgaacacgtcataggctattttcataagttctcccaaacagtctca 42461356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 267
Target Start/End: Complemental strand, 21043348 - 21043200
Alignment:
Q  122 tgtttatgtataagttatttctatta-caaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaac 218  Q
    ||||| |||||||||||||||||||| ||||||||||| || ||   |||||||||||| || || | ||  |||| |||| |||||   |||||||| |    
T  21043348 tgtttgtgtataagttatttctattaacaaaagataaattatagttaaactgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagc 21043249  T
Q  219 ttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||| |||| |||||||| |||||| |||||  ||||| |||||||||||    
T  21043248 ttatgaacgtgtcataagctgtttccataacctctcccaaacagtctca 21043200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 27123398 - 27123317
Alignment:
Q  186 atggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||||||| |||||||||||||||||||||   |||||||||||  ||||| |||||| ||||  |||||||||||    
T  27123398 atggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctca 27123317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 48719428 - 48719371
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttc 252  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||  |||||||||||||    
T  48719428 ttatgaaaataagctgaaaacagcttacgaacatgtcataaaccattttcataagttc 48719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 2996580 - 2996679
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||||| || || | ||| |||| |||| |||||||||||||| | |||| | |||||||||||  |||||||||||| ||||  ||||||||||||    
T  2996580 tgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaa 2996679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 7694074 - 7693992
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||||||| ||||| | ||| ||| ||||| ||||||| ||||||||||||| ||||||||||| ||||  |||||||||||    
T  7694074 ctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcattaact-atttcataagtt 7693992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 17223067 - 17223020
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||    
T  17223067 aaataagttgaaaacagcttatgaacatgtcataaactattttcataa 17223020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 39063647 - 39063608
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtc 264  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  39063647 acatgtcataaactgttttcataagctctcctaaacagtc 39063608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 39178297 - 39178230
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||||||||||||| ||||  ||| |||||||| | ||||||||||||||||| ||||||| ||||    
T  39178297 aaataagttgaaaacatcttattaacgtgtcataagcggttttcataagttctcccaaacagtgtcaa 39178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 308
Target Start/End: Complemental strand, 7368085 - 7367976
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataa 298  Q
    ||||| ||||||| || ||||  |||||||||||| |||||||||| || ||||| |||||||||  |||| | |||| |  ||||||| ||||||||||    
T  7368085 aaatatgttgaaagcagcttataaacatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataa 7367986  T
Q  299 ttcaatccaa 308  Q
     |||||||||    
T  7367985 gtcaatccaa 7367976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 37863982 - 37863932
Alignment:
Q  204 taagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||| ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  37863982 taaggtgaaaacaacttatgaacgtgtcataagctgttttcataagttctc 37863932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 51044593 - 51044551
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  51044593 tgtttatgtataagctatttctataacaaaagataaaataaag 51044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 3176141 - 3176073
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||| ||||||| |||||||||||||   ||||| |||||  |||||||||||| |||||||||||||    
T  3176141 ttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagt 3176073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 23819118 - 23819194
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||  ||||||| ||||||||||||| | ||||||||||| |||||||| |||  ||| | |||||||||||    
T  23819118 gagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaacagtctca 23819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 308
Target Start/End: Original strand, 28615384 - 28615482
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||| ||||| |||  |||||| |||| |  ||||||| ||| |||||| |||||||||    
T  28615384 aaaacaacttatgaaaatgtcattagctgttttcataagttctcc-aaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaa 28615482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 39886682 - 39886622
Alignment:
Q  203 ataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||||||||| ||| |||||||||||||| || ||||| ||||||||  |||||||    
T  39886682 ataagttgaaaacaatttatgaacatgtcataaaatgctttcacaagttctctcaaacagt 39886622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 3176254 - 3176215
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  3176254 tttatgtataagttatttctataacaaaagattaaataaa 3176215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 4071925 - 4071995
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttata 277  Q
    |||||||||||||| ||||  |||||| ||||||||||||| ||||  |||||||||  ||||||||||||    
T  4071925 tgaaaacaacttaccaacaaatcataagctgttttcataagctctctcaaacagtctcacaagtgcttata 4071995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 4191678 - 4191776
Alignment:
Q  125 ttatgtataagttatttctattacaaaagat-aaaataaag--gaactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaactt 220  Q
    ||||||||||| ||||||||| ||||||||| |||||||||   |||||||||||| ||||| | ||| |||| |||| ||||||| ||| || |||||    
T  4191678 ttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcataagttatcctggagagcgtatggaaataagctgagaagaactt 4191776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 6364088 - 6364127
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaag 6364127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 8469413 - 8469362
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcata 247  Q
    |||| ||||||| ||||||||||||| |||||||||||||| || |||||||    
T  8469413 tatggaaataagctgaaaacaacttatgaacatgtcataaattgctttcata 8469362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 19422357 - 19422396
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  19422357 ttatgtataagttatttctataacaaaagatataataaag 19422396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 30024639 - 30024678
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  30024639 ttatgcataagttatttctataacaaaagataaaataaag 30024678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 49202684 - 49202751
Alignment:
Q  201 aaataagttgaaaacaacttacgaac-atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||||||||||| |||| |||| |||| ||| ||| ||||||||| | |||||||||||    
T  49202684 aaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttcttccaaacagtctca 49202751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 50662769 - 50662702
Alignment:
Q  201 aaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||||||||| | |||| ||| || ||||| |||||||||||||||||||| |||| |||||||    
T  50662769 aaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagttctcttaaagagtctca 50662702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 18628609 - 18628555
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaactt 220  Q
    |||||||||||| ||||| | ||| ||||||||| ||||||| ||||||||||||    
T  18628609 aactgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 46401303 - 46401365
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||| |||| |||||||| |||||||||||||  ||| | ||||| ||||||||||||||    
T  46401303 aaataagctgaatacaacttatgaacatgtcataagttgtgtacataaattctcctaaacagt 46401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 10192317 - 10192350
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatg 229  Q
    |||| |||||||||||||||||||||||||||||    
T  10192317 tatgaaaataagttgaaaacaacttacgaacatg 10192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 22666498 - 22666595
Alignment:
Q  171 ttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| || || ||||| || ||||||  ||||||  |||||||||| | || || |||||||||||| |||||||||||| || |||||||||||    
T  22666498 ttttcataagctatcatggagaacttatgacaataagcagaaaacaactcatgatcaatgtcataaactgatttcataagttcccccaaacagtctca 22666595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 24936249 - 24936286
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  24936249 ttatgtataagttatttctataacaaaatataaaataa 24936286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 28623228 - 28623265
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  28623228 ttatgtataagttatttatataacaaaagataaaataa 28623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 44119295 - 44119254
Alignment:
Q  123 gtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaacaaag 44119254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 46090850 - 46090797
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    |||| ||||| | ||||||||||| ||||||||||| ||| |||||||||||||    
T  46090850 tatgaaaataggctgaaaacaactaacgaacatgtcttaagctgttttcataag 46090797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 50681126 - 50681053
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| |||||| ||||||| | |||| ||| || ||||| ||||||||||||||||||||  |||||||||||    
T  50681126 ttatgaaaataaattgaaaaaagcttatgaaaattgtcattaactgttttcataagttctctcaaacagtctca 50681053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 52645882 - 52645845
Alignment:
Q  123 gtttatgtataagttatttctattacaaaagataaaat 160  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  52645882 gtttatgtataagctatttctataacaaaagataaaat 52645845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 1965980 - 1966028
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    ||||||||| |||||| |||| |||||||||||||  ||||||||||||    
T  1965980 aaataagttaaaaacagcttatgaacatgtcataagttgttttcataag 1966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 6987782 - 6987706
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||||||||| |  ||| | |||||||||||  ||| | |||||| ||||| |||||||||||    
T  6987782 gagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctca 6987706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 17822869 - 17822829
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||||||| ||||||||||| |||||||    
T  17822869 atgtcataagctgttttcatatgttctcctaaatagtctca 17822829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 20936266 - 20936210
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||  ||||||||||||||    
T  20936266 ttatggaaataaggtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 22471347 - 22471379
Alignment:
Q  235 aactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||||||||||| |||||||||||    
T  22471347 aactgttttcataagttctcccaaacagtctca 22471379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 22662076 - 22662116
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  22662076 atgtcataaactgatttcataagttcccccaaacagtctca 22662116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 25434491 - 25434451
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  25434491 atgttataagctgttttcataagctctcctaaacagtctca 25434451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 29774310 - 29774346
Alignment:
Q  231 cataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| || ||||||||||||||||||||||||||||    
T  29774310 cataagctattttcataagttctcctaaacagtctca 29774346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 40613238 - 40613270
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaaca 227  Q
    ||||| |||||||||||||||||||||||||||    
T  40613238 ttatggaaataagttgaaaacaacttacgaaca 40613270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 42641767 - 42641727
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||||||| |||||| || ||||||||||||||||    
T  42641767 tgtttatgtataagctatttccataacaaaagataaaataa 42641727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 46019670 - 46019626
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||    
T  46019670 gagcttatgaatataagttgaaaacaacttatcaacatgtcataa 46019626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 49219172 - 49219240
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||| ||||||| ||||||||||||| | | |||  || || |||||||||||| |||||||||||||    
T  49219172 ttatggaaataagctgaaaacaacttatggagatgctattaattgttttcataaggtctcctaaacagt 49219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 52172786 - 52172830
Alignment:
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||| ||||||||||||||| |||  ||||||||||    
T  52172786 gaacatgtcataagctgttttcataagttttccccaacagtctca 52172830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 54325165 - 54325129
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||  ||||||||||||||||||||||||||||    
T  54325165 tgtataaactatttctattacaaaagataaaataaag 54325129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 28677700 - 28677626
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||| |||||||  |||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||    
T  28677700 gagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtct 28677626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 40158725 - 40158823
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||   ||| ||||||||| || |||| |||||||||||||  |||||||||||| |||||||||||||||| || || ||||||||    
T  40158725 tgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctca 40158823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 305
Target Start/End: Complemental strand, 8820333 - 8820217
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggtagatag 288  Q
    ||||||||| ||||||| |||||||| |||  |||||||||| || |||||| |||||| |||| ||| |||||||  |||||||||||   |||||||     
T  8820333 gagcttatggaaataagctgaaaacagcttgtgaacatgtcagaagctgtttccataaggtctcttaagcagtctcgaaagtgcttatattagtagatat 8820234  T
Q  289 actcaaataattcaatc 305  Q
    |||||||||| ||||||    
T  8820233 actcaaataagtcaatc 8820217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 1647265 - 1647333
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaa 259  Q
    ||||||||| ||||||| |||||||| |||| || |||||||||| ||||||||||||||||| |||||    
T  1647265 gagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttcttctaaa 1647333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 12313214 - 12313138
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||| ||||||| ||||||| ||||| |||||||||||| |||||| ||||| |||||    
T  12313214 gagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctca 12313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 41817197 - 41817269
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| ||||||| ||||||||| |||  ||||||||||||  ||||||||||| ||||||||||||||    
T  41817197 gagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 35379079 - 35378992
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcct 256  Q
    ||||||||| || || | ||| ||||||||| ||||||| ||||||||||||| ||||| ||||| | ||||||||||||| ||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctcct 35378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 10150673 - 10150731
Alignment:
Q  104 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||  | |||||||||||||||||||||||| | ||||||||||||||    
T  10150673 aagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 787373 - 787480
Alignment:
Q  203 ataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca--gtctcaagtgcttatacaggtagatagactcaaataatt 300  Q
    ||||| |||||||| |||| | ||||||||||| ||||||||||||||||||  |||||  ||| ||||||||||| |  |||||||  ||| ||||||     
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagatatgctcgaataatc 787472  T
Q  301 caatccaa 308  Q
    ||||||||    
T  787473 caatccaa 787480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 32106840 - 32106764
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| | |||| ||||||||| |||||  | ||||||||| ||||||||||||||||||  |||||||||||    
T  32106840 gagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtctca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 35378572 - 35378508
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcct 256  Q
    |||||||| ||||||| |||||| |||||| ||||| ||||| | ||||||||||||||||||||    
T  35378572 agcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttcataagttctcct 35378508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 43529899 - 43529784
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggtagatag 288  Q
    ||||||||| ||||||  |||||| | |||| ||||||| ||||| |||||||||||| |||||| ||||||| ||  ||||||||||||   ||||||     
T  43529899 gagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttataccaatagataa 43529800  T
Q  289 actcaaataattcaat 304  Q
     ||||||||| |||||    
T  43529799 gctcaaataagtcaat 43529784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 16867768 - 16867815
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaact 238  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  16867768 gagcttatggaaataagttgaaaacaacttatgaatatgtcataaact 16867815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 32098439 - 32098297
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag--gaactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttac 222  Q
    |||| |||||| ||||||||| ||||||||||||||||||   || ||||||||| |||||  |||| || |||| | ||||||| |||||| | |||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcataagttattatggagaacttacggaaataagctgaaaatagcttac 32098340  T
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
       |||| ||||| || ||| |||||| ||||| |||||||||    
T  32098339 aggcatgccataagctatttccataagatctcccaaacagtct 32098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 43530147 - 43530088
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    |||| |||||||||||||| | |||  ||||||||||||| |||||||||||||||||||    
T  43530147 tatggaaataagttgaaaatagcttgtgaacatgtcataatctgttttcataagttctcc 43530088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 264
Target Start/End: Complemental strand, 44606240 - 44606078
Alignment:
Q  104 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgca 201  Q
    |||| |||||||||  | |||||||||||||| |||||  || ||||||||||||||||||   || ||||||||| |||||   |      |||||| |    
T  44606240 aagcgcttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcataagttattctaaaacacttatgaa 44606141  T
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtc 264  Q
    ||| || ||||||||||||| | |||||||||||  |||||||||||||||| | ||||||||    
T  44606140 aatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 5902572 - 5902514
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||  ||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  5902572 tgaaaacagtttatgaacatgtcataagctgttttcataagttcttccaaacagtctca 5902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 13220460 - 13220534
Alignment:
Q  189 gggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    |||| |||||||||||||||| |||||| |||| ||||| |||||||  |||||| ||||||||||  |||||||    
T  13220460 gggaacttatgcaaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctctcaaacagt 13220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 24141780 - 24141742
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24141780 ttatgtataagttatttctatcacaaaagataaaataaa 24141742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 38809355 - 38809425
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    ||||||||| ||||||||||||||||  |||  |||||||||||| ||| ||| ||||||||||| |||||    
T  38809355 gagcttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctcccaaaca 38809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 39621981 - 39622078
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca--gtctcaagtgcttatacaggtagata 287  Q
    |||||| | ||||||| ||||||||| ||| |||  ||||||||  |||||||||||||||||  |||||  ||| |||||||||||||| |||||||    
T  39621981 agcttaaggaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaagtagata 39622078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 40682433 - 40682359
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaac-atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| || |||| | ||||||||| ||||| |||||    
T  40682433 cttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaacaatctca 40682359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 43827984 - 43827922
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| ||| ||||||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  43827984 aaataagttaaaagcaacttatgaacatgtcataagctgtttttataagttttactaaacagt 43827922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 8017438 - 8017527
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    |||||||||||| || || | ||| || |||||| ||||| |  |||||||| ||| |||||| |||||| |||||||||||||||||||    
T  8017438 aactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataagctgttttcataagttctcc 8017527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 267
Target Start/End: Complemental strand, 8187519 - 8187418
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| || || ||||| ||| ||||| ||||||  |||||||||||| |||| || ||||||  ||| ||||||||||||   |||||||||    
T  8187519 aactgttttcataagctaccatggagagattatggaaataacctgaaaacaacttgcgaaaatttcataagttgtattcataagttctttcaaacagtct 8187420  T
Q  266 ca 267  Q
    ||    
T  8187419 ca 8187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 11892093 - 11892150
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||| ||| ||| ||||||||||||||||||||||| |||| |||||| ||||||    
T  11892093 aaaacaatttatgaatatgtcataaactgttttcataagctctcgtaaacaatctcaa 11892150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 11897759 - 11897816
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||| ||| ||| ||||||||||||||||||||||| |||| |||||| ||||||    
T  11897759 aaaacaatttatgaatatgtcataaactgttttcataagctctcgtaaacaatctcaa 11897816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 43065513 - 43065428
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||| ||||| | ||| ||||||||  ||||||| ||||||||| ||| | |||||||||||  |||||||||||| ||||    
T  43065513 tgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 33192243 - 33192306
Alignment:
Q  203 ataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| |||||||| |||| | | ||||||||||||||||||||||||||| | |||||||||||    
T  33192243 ataagctgaaaacagcttatggatatgtcataaactgttttcataagttcttc-aaacagtctca 33192306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 40672928 - 40672888
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  40672928 tttatgtataagttatttctatgaaaaaagataaaataaag 40672888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 43717177 - 43717117
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    ||||||||| ||||||| |||||||||| || ||| ||||| ||| |||||||||||||||    
T  43717177 gagcttatgaaaataagctgaaaacaacctatgaaaatgtcctaagctgttttcataagtt 43717117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 44438903 - 44438795
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||| ||||| | ||| || ||| || ||||||| ||||||||  ||| ||||||||||||| ||||||||| | |||| || | |||||||||    
T  44438903 ctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttcacatgttcccccagacagtctca 44438804  T
Q  268 agtgcttat 276  Q
    |||| ||||    
T  44438803 agtgattat 44438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 1801724 - 1801767
Alignment:
Q  218 cttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||    
T  1801724 cttatgaacatgtcataagctgttttcataagttctcccaaaca 1801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 5133711 - 5133750
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 10143111 - 10143146
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaat 160  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaat 10143146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 29316839 - 29316764
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgtttt 243  Q
    |||||||||| || || | ||| || |||||| ||||||| |||||| |||||| ||||||||||||| |||||||    
T  29316839 ctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 1939458 - 1939424
Alignment:
Q  130 tataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||| ||||||||||||||||||    
T  1939458 tataagttatttctataacaaaagataaaataaag 1939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 5045291 - 5045249
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||    
T  5045291 tgtttatgtataagctatttttataacaaaagataaaataaag 5045249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 11063518 - 11063592
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||||||| ||||||| | ||||||||||| | |||||||||||  ||||| |||||| ||| | ||||||||||    
T  11063518 agcttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaacagtctc 11063592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 13864586 - 13864628
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    
T  13864586 tgtttatgtataagctatttctataacaaaaggtaaaataaag 13864628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 15173466 - 15173504
Alignment:
Q  126 tatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  15173466 tatgtataagttatttctataacaaaagatgaaataaag 15173504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 32837386 - 32837428
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||| ||||||||||||||||||| |||||||||||    
T  32837386 acatgttataagctgttttcataagttctcccaaacagtctca 32837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 38239685 - 38239647
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaat 160  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  38239685 tgtttatgtataagctatttctataacaaaagataaaat 38239647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 1939398 - 1939329
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    |||||||||||| || ||   ||| ||||||||| |||||||||||||||| |||| | |||||||||||    
T  1939398 aactgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataa 1939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 2964846 - 2964789
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttc 252  Q
    ||||| ||||||| |||||| | || || |||||||||||| ||||||||||||||||    
T  2964846 ttatggaaataagctgaaaaaagctaaccaacatgtcataagctgttttcataagttc 2964789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 26143704 - 26143603
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||||||||| || |||| ||| || |||||| ||||||| |||||| ||| |  ||||| || |||||  ||||||| |||||||||| ||||||||||    
T  26143704 ctgttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgttttcgtaagttctcccaaacagtctc 26143605  T
Q  267 aa 268  Q
    ||    
T  26143604 aa 26143603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 42419859 - 42419900
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  42419859 atgtcataagctgttttcgtaagttctcccaaacagtctcaa 42419900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 44786436 - 44786375
Alignment:
Q  226 catgtcataaactgttttcataagttctcctaaacagtctcaagtgcttatacaggtagata 287  Q
    ||||||| || || ||||| |||||||||| ||||||||||||||| |||| | ||||||||    
T  44786436 catgtcagaagctattttcgtaagttctccgaaacagtctcaagtgtttatgctggtagata 44786375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 4350751 - 4350806
Alignment:
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttat 276  Q
    ||||||||||||| ||||||||||||||||||  ||||| ||||  ||||||||||    
T  4350751 gaacatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttat 4350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 10567086 - 10567162
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| || |||| || ||||||||||||| || |||||||||| |||||| || ||  ||||| |||||||||||    
T  10567086 gagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaacagtctca 10567162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 28803537 - 28803446
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataattcaatccaagtaggc 314  Q
    |||||||||||  ||||| |||| ||||||  |||||||||  || |||||||| | ||||||||  ||||||||| ||||||||| |||||    
T  28803537 acatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaataggc 28803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 31096333 - 31096393
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||| ||||||||| |||||| |||| | |||||| || ||||||||||||||| ||||    
T  31096333 cttatgaaaataagtttaaaacagcttatggacatgttattaactgttttcataagctctc 31096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 34055032 - 34054992
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaagg 165  Q
    ||||||||| | ||||||||| |||||||||||||||||||    
T  34055032 ttatgtataggctatttctataacaaaagataaaataaagg 34054992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 34652077 - 34652033
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| |||||||||||||||| |||| | |||||||||||    
T  34652077 gagcttatggaaataagttgaaaacagcttatggacatgtcataa 34652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 39567845 - 39567881
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  39567845 tgtataagatatttctataacaaaagataaaataaag 39567881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 42621439 - 42621363
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttc 244  Q
    |||||||||| |||||   ||| || ||| || ||||||| ||||||||||||||  |||||||| |||||||||||    
T  42621439 ctgttttcataagttattctggagaacttgtgaaaataagctgaaaacaacttacagacatgtcaaaaactgttttc 42621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 43199356 - 43199392
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||  ||||||||||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaag 43199392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 44443259 - 44443295
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaata 161  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  44443259 ttatgtataagctatttttattacaaaagataaaata 44443295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 37273138 - 37273239
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| || || | ||| || |||||| ||||||||||||||||||||| | |||||||||||  ||||| |||||| ||||| |||||||||    
T  37273138 aactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtct 37273237  T
Q  266 ca 267  Q
    ||    
T  37273238 ca 37273239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 305
Target Start/End: Original strand, 24281070 - 24281192
Alignment:
Q  185 catggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt--ctcaagtgcttatacaggt 282  Q
    ||||| ||||||||| || |||||||||||||||||| | | || ||||||  |||||||||||| ||||  ||||| |  | |||||||||||||  ||    
T  24281070 catggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctcaaacaatcacacaagtgcttataccagt 24281169  T
Q  283 agatagactcaaataattcaatc 305  Q
    |||||||||||||||| ||||||    
T  24281170 agatagactcaaataagtcaatc 24281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 21574510 - 21574596
Alignment:
Q  182 taacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||||| ||||||||| ||||||| | ||| || |||| |||||||||||||  |||||||||||| ||||| ||||||||||||    
T  21574510 taacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtctcaa 21574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 45541618 - 45541719
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataattcaatcc 306  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||  |||||| ||||||   || |||  ||||||||| |||||||    
T  45541618 tgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatcc 45541717  T
Q  307 aa 308  Q
    ||    
T  45541718 aa 45541719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 5391911 - 5391968
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 47513682 - 47513758
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||| |||||||||||||| |||| ||||||||  ||||||||||||| ||||  ||||||||||    
T  47513682 gagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctca 47513758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 20195073 - 20194998
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||| ||| ||||||||||||  ||| ||||||||||||||||||||||| ||||  |||||||||||    
T  20195073 gagcttatgaaaa-aagctgaaaacaacttttgaatatgtcataaactgttttcataagctctcacaaacagtctca 20194998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 21367674 - 21367770
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtc 264  Q
    ||||||||| || || | ||| || |||||| ||||||| |||||||| |||  ||||| |||||||| ||||||||||||||||||| ||||||||    
T  21367674 tgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagtc 21367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 38971297 - 38971341
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttca 245  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  38971297 aaataagttgaaaacagcttacgaacatgttataaactgttttca 38971341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 53762425 - 53762361
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||| || ||||||  ||||||||    
T  53762425 aaataagttgaaaacagcttatgaacatgtcataagctgttttcaaaatttctccctaacagtct 53762361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 39602248 - 39602193
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    |||||| ||||||||||||||||| ||| ||||||||||||| |||| ||||||||    
T  39602248 cttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataag 39602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 42745068 - 42745135
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaa 259  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||  ||||| ||||| |||| |||||    
T  42745068 agcttatggaaataagatgaaaacaacttatgaacatgtcataagttgtttacataaattcttctaaa 42745135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 43116481 - 43116426
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcata 247  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||  ||||||||||    
T  43116481 agcttatgcaaataagttgaaaagaacttaagaacatgttataagttgttttcata 43116426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 24605150 - 24605108
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  24605150 tgtttatgtataagttatttctataacaaaagatgaaataaag 24605108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 39980761 - 39980835
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaa-catgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||||| | |||| ||| |  ||||||| |||||||||||||||||| ||||||||||||    
T  39980761 cttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacagtctca 39980835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 40880979 - 40880913
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||||||||  ||||||||||  |||||||||||| ||||  |||||||||||    
T  40880979 aaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacagtctca 40880913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 54837074 - 54837000
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||||||  |||||||  |||||||| ||| ||||||||||||| |||||||||||| |||| | ||||||||||    
T  54837074 agcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 2128384 - 2128343
Alignment:
Q  123 gtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaataaag 2128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 2152219 - 2152162
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||||  |||||||||||    
T  2152219 gagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataa 2152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3044309 - 3044256
Alignment:
Q  182 taacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    |||| ||| ||||||||| |||||||||||||||| |||| |||||||||||||    
T  3044309 taacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataa 3044256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 24603790 - 24603717
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||  ||||||||| |||| |  |||||||||||||||||  ||||||||||| |||||||||||    
T  24603790 cttatggaaatatcttgaaaacagcttatgggcatgtcataaactgtttcaataagttctcccaaacagtctca 24603717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 32703074 - 32703115
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  32703074 tgtttatgtataagctatttctattataaaagataaaataaa 32703115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 44014816 - 44014720
Alignment:
Q  214 acaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    |||||||| ||||| ||||||| ||||||||||||||| ||  |||||||||  |||||| |||| |  ||||||| ||||||||||  ||||||||    
T  44014816 acaacttatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaa 44014720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 44747197 - 44747152
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||    
T  44747197 tgaaaacaacttatgaacatgtcataaactgtttccataagatctc 44747152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 23808101 - 23808029
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| ||||||| ||||||||| ||  ||||||||||||| ||| ||||||||||| ||| |||| ||||||    
T  23808101 ttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaaccgtctca 23808029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 25925771 - 25925815
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||    
T  25925771 gagcttatgaaaataagttgaaaacagcttatgaacatgtcataa 25925815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 29427676 - 29427616
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    |||||||||||||| | |||| ||||||||||| |  |||||||||||||||||| |||||    
T  29427676 aaataagttgaaaatagcttatgaacatgtcattaggtgttttcataagttctcccaaaca 29427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 34707525 - 34707461
Alignment:
Q  203 ataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||||||||| | |||||||| ||  |||||||| ||||||||  |||||||||||    
T  34707525 ataagttgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctca 34707461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 45432980 - 45432936
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  45432980 gagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 53952081 - 53952149
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||| ||||||| |||||||| || | |||||||| || | |||||||||||||||||| ||||||||    
T  53952081 ttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttctcttaaacagt 53952149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 26330363 - 26330288
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||  |||||| ||| || |||||||||| ||  |||||||||||| ||| |||||||||||||    
T  26330363 agcttatggaaataacctgaaaagaacctatgaacatgtcagaagttgttttcataagctcttctaaacagtctca 26330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 39723270 - 39723219
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    |||||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  39723270 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttct 39723219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 43046720 - 43046771
Alignment:
Q  216 aacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||| ||| || ||||||||||||||||||| |||||||||||    
T  43046720 aacttatgaacatttcaaaagctgttttcataagttctcccaaacagtctca 43046771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 48365010 - 48364971
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaag 48364971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 52440700 - 52440633
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    |||||| |||| |||||||||||||||| ||||||||||||| || || ||| ||| | |||||||||    
T  52440700 cttatgaaaattagttgaaaacaacttatgaacatgtcataagctattctcacaagctttcctaaaca 52440633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 402570 - 402508
Alignment:
Q  204 taagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||| |||||||| |||| ||||| |||||||| ||||||||||| ||||||| |||||||||    
T  402570 taagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaaacagtct 402508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 1395611 - 1395649
Alignment:
Q  126 tatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaag 1395649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 16790219 - 16790181
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  16790219 ttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 36189506 - 36189544
Alignment:
Q  126 tatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaataaag 36189544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 37788797 - 37788838
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  37788797 tgtttatgtataagttattt-tataacaaaagataaaataaag 37788838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 41644476 - 41644399
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca--gtctcaagtgcttat 276  Q
    ||||||| |||||||| |||| ||| |||||  ||  |||||| |||||||||||||||||  |||||||||||||||    
T  41644476 aaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcctaaacagtgtctcaagtgcttat 41644399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 10101601 - 10101568
Alignment:
Q  131 ataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||| ||||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaag 10101568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 10212526 - 10212493
Alignment:
Q  131 ataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||| ||||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaag 10212493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 20174019 - 20173982
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  20174019 ttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 30573977 - 30573892
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||||| || || | ||| ||||| ||| | ||||| |||||||| |||| ||||||| |||||  |||||||||||||||||    
T  30573977 tgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 31365225 - 31365152
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| |||| ||||||||| | |||| ||| || ||||||| ||| ||||||||||||||| |||||||||||    
T  31365225 ttatgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctca 31365152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 31403397 - 31403462
Alignment:
Q  201 aaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||| || |||||||||| ||||| ||| |||||||||| ||||||||||||| ||| |||||    
T  31403397 aaataagctgtaaacaacttatgaacaatgttataaactgttctcataagttctcccaaatagtct 31403462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 33882969 - 33883006
Alignment:
Q  127 atgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaag 33883006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 36101597 - 36101650
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttc 244  Q
    ||||||||| ||||||| |||||||| |||  ||||||||||||| ||||||||    
T  36101597 gagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 36139907 - 36139960
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttc 244  Q
    ||||||||| ||||||| |||||||| |||  ||||||||||||| ||||||||    
T  36139907 gagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 36887463 - 36887496
Alignment:
Q  127 atgtataagttatttctattacaaaagataaaat 160  Q
    ||||||||||||||||||| ||||||||||||||    
T  36887463 atgtataagttatttctataacaaaagataaaat 36887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 22203496 - 22203535
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  22203496 atgtcataagctgttttcataagttctcc-aaacagtctca 22203535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 24235811 - 24235775
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaag 24235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 24785234 - 24785278
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| | ||||||||||| |||||||||||||    
T  24785234 gagcttatgtaaataagctaaaaacaacttatgaacatgtcataa 24785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 27896201 - 27896137
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||| |||  |||| ||| |||| |||||| | |||||||||||| ||||||||||||||||    
T  27896201 aaataagctgacgacaatttatgaacttgtcatgagctgttttcataaattctcctaaacagtct 27896137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 30669104 - 30669064
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||||||| ||||| ||| ||||||||||||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataa 30669064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 32663578 - 32663614
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaa 158  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  32663578 tgtttatgcataagttatttctataacaaaagataaa 32663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 33880597 - 33880526
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||| ||||||||| | |||||| |||| | |||| |||| | ||||||||||||||||||| |||||||    
T  33880597 gagcttaggcaaataagattaaaacagcttatggacat-tcatgatctgttttcataagttctcccaaacagt 33880526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 33883788 - 33883748
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcata 234  Q
    |||||| ||||||| ||||||||||||| ||||||||||||    
T  33883788 cttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 36445670 - 36445710
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||| ||||||||| |||||||| |||||||||    
T  36445670 tttatgtataagctatttctataacaaaagagaaaataaag 36445710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 36769980 - 36769936
Alignment:
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||| | |||||||||||||||||| ||| ||||||||    
T  36769980 gaacatgtcatgagctgttttcataagttctcataatcagtctca 36769936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 39723421 - 39723381
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  39723421 aaaacagcttatgaacatgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 40665436 - 40665500
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcat 233  Q
    ||||||||| ||||| | ||| ||||||||  ||||||| |||||||| |||| |||||||||||    
T  40665436 tgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 48049045 - 48048981
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcat 233  Q
    |||||||||||| || | ||||||| ||||| ||||||| |||||||| |||| | |||||||||    
T  48049045 tgttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcat 48048981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 50952362 - 50952438
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| | ||||||  ||| ||||||||||||| |||||||| || ||||||   ||||||||||    
T  50952362 gagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttcgtacgttctctcgaacagtctca 50952438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 51130757 - 51130849
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    ||||||||| || || ||||| |||||  || ||||||| ||||| ||||||| | |||||||||| |  ||||||||||| ||||| |||||    
T  51130757 tgttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgtcatacatggttttcataagctctcccaaaca 51130849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 54775074 - 54775106
Alignment:
Q  132 taagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||||||||||||    
T  54775074 taagttatttctataacaaaagataaaataaag 54775106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 7244641 - 7244760
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaagg--aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttac 222  Q
    ||||||||||| |||||||||  |||||||||||| ||||   |||||||||||| || ||   ||| ||||||||| ||||||| |||||||||||||     
T  7244641 ttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttat 7244740  T
Q  223 gaacatgtcataaactgttt 242  Q
    || ||||||||||| |||||    
T  7244741 gagcatgtcataaattgttt 7244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 20553132 - 20553208
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||  ||||||||||||| ||||||||| ||| |||||| |||||| |||||| ||||||||||    
T  20553132 gagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagctctcctgaacagtctca 20553208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 308
Target Start/End: Original strand, 25596037 - 25596180
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||| ||||||| || || | ||| ||||||||| |||||||||||||||||||||  ||| |||||||| ||||||| ||| ||| |||  |||| |||    
T  25596037 aactcttttcataagctatcttggagagcttatgaaaataagttgaaaacaacttagtaacttgtcataagctgtttttataggttttccctaacaatct 25596136  T
Q  266 ca-agtgcttatacaggtagatagactcaaataattcaatccaa 308  Q
    || | ||||||| | ||||||||  ||||||||| ||| |||||    
T  25596137 cacaatgcttatgctggtagataagctcaaataagtcagtccaa 25596180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 43250740 - 43250681
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagt 250  Q
    ||||||||| | ||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  43250740 gagcttatgaatataaactgaaaacaacttacgaacatgtcataagctgttttcataagt 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 30535597 - 30535667
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||| ||||||  |||||||| ||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  30535597 tatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctc 30535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 46082065 - 46082142
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||||| ||||||| ||||||||||||| |  ||||||||||  |||||||||||| |||| | |||||||||||    
T  46082065 gagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctctcattaacagtctcaa 46082142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 946789 - 946833
Alignment:
Q  223 gaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  946789 gaacatgtcataaactattttcataagttcttctaaacagtctca 946833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 21853247 - 21853208
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  21853247 ttatatataagttatttctattacaaaagataaaataaag 21853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 1432098 - 1432060
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaa 1432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 15740448 - 15740390
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||| ||||||||| |||||| |||| |||||||||||||  ||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 23918893 - 23918935
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  23918893 tgtttatgtgtaagttatctctattacaaaagataaaataaag 23918935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 33894666 - 33894732
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| ||||||||||||| | ||||||||||  ||||||||||||| ||||  |||||||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctca 33894732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 305
Target Start/End: Original strand, 1422918 - 1423034
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggtagatag 288  Q
    ||||||||| |||||| |||||||||| |||   || ||||||||||| |||||||||| |||| |||||| ||||  |||||  |||||   |||| ||    
T  1422918 gagcttatgaaaataaattgaaaacaatttatagacttgtcataaactattttcataagctctcttaaacaatctcataagtgtctataccaatagagag 1423017  T
Q  289 actcaaataattcaatc 305  Q
    |||||||||| ||||||    
T  1423018 actcaaataagtcaatc 1423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 9038116 - 9038216
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| |  || ||||| || ||| || ||||||| ||||||||| ||| ||||||||||||| ||||||| ||||||||| || |||| |||    
T  9038116 aactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataagctgtttttataagttcttctgaacattct 9038214  T
Q  266 ca 267  Q
    ||    
T  9038215 ca 9038216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 22387942 - 22387861
Alignment:
Q  186 atggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||||||| ||||||||| ||||||  |||  |||||| |||||  |||||||||||| ||||| |||||||||||    
T  22387942 atggagagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctca 22387861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 28727794 - 28727729
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    ||||||| |||||||||| |||||||||||||||| | |||| |||||| ||||  ||||||||||    
T  28727794 aaataagctgaaaacaacatacgaacatgtcataagccgtttccataagctctctcaaacagtctc 28727729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 25670627 - 25670551
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| || ||||||| ||||||||| |||  ||||||||||||  |||||||||||||| ||  |||||||||||    
T  25670627 gagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctca 25670551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 420427 - 420466
Alignment:
Q  228 tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  420427 tgtcataaattgttttcataagttctcccaaacagtctca 420466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 9423625 - 9423578
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    ||||||| ||||||||||||| |||||||||||||| ||||| |||||    
T  9423625 aaataagctgaaaacaacttatgaacatgtcataaattgtttccataa 9423578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 15740593 - 15740534
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgt-cataaactgttttcataagttct 253  Q
    ||||| |||||||||||||||| |||| | |||||| ||||| |||||||||||||||||    
T  15740593 ttatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 15740534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 20526485 - 20526552
Alignment:
Q  201 aaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| | |||||| |||||||| | ||| |||||||||||||||||||||||  |||||||||||    
T  20526485 aaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctctcaaacagtctca 20526552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 22551446 - 22551363
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaagtgctt 274  Q
    ||||||||| ||||||| |||||||||| |  ||||||||||||| ||||||||| ||  ||||  |||||||| || ||||||    
T  22551446 gagcttatgtaaataagctgaaaacaacatttgaacatgtcataagctgttttcaaaatctctctcaaacagtcacaggtgctt 22551363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 25511656 - 25511707
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgtttt 243  Q
    |||||||| |||||||||||| |||| ||| ||||||||||||| |||||||    
T  25511656 agcttatggaaataagttgaagacaatttatgaacatgtcataagctgtttt 25511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 27378958 - 27378905
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag--gaactgttttcat 177  Q
    ||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||    
T  27378958 ttatgtataagctatttctattacaaaag-taaaataaagtagaactgttttcat 27378905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 35809038 - 35808999
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaata 161  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  35809038 tgtttatgtataagctatttctataacaaaagataaaata 35808999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 43219674 - 43219623
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    |||||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  43219674 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttct 43219623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 19022623 - 19022549
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||| |||||||| ||| || |||||||  ||||||||||| |||||| ||||| |||||    
T  19022623 cttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctca 19022549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 20476653 - 20476603
Alignment:
Q  113 ttatactactgtttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||| | ||| |||| |||||||||||||||| ||||||||||||||||    
T  20476653 ttatacaagtgtgtatgcataagttatttctattgcaaaagataaaataaa 20476603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 21568533 - 21568459
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| || ||||||||||| | |||| ||| || || |||| ||||||||||||||||||| |||||||||||    
T  21568533 cttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctca 21568459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 29286821 - 29286871
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttt 242  Q
    |||||||| ||||||| ||||||||||| | ||||||||||||||| ||||    
T  29286821 agcttatgtaaataagctgaaaacaactgatgaacatgtcataaaccgttt 29286871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 29574632 - 29574590
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||| |||||| |||||||||||| |||||||||||    
T  29574632 acatgtcataagctgtttccataagttctccgaaacagtctca 29574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 39591593 - 39591559
Alignment:
Q  130 tataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||| ||||||||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaag 39591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 39967959 - 39968013
Alignment:
Q  201 aaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctc 254  Q
    |||||||||||||||| |||| ||||| || ||||| ||||||||||||||||||    
T  39967959 aaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 44241800 - 44241838
Alignment:
Q  126 tatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  44241800 tatgtataagttatttctataacaacagataaaataaag 44241838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 2727512 - 2727451
Alignment:
Q  104 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataaagg 165  Q
    |||||||||||| | || |||| |||||||   ||||||||| |||||||||||||||||||    
T  2727512 aagcacttattagattagtgttgatgtatagactatttctataacaaaagataaaataaagg 2727451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 2894753 - 2894809
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag--gaactgttttca 176  Q
    |||| ||||||||| ||||||||| |||||||||||| |||||  ||||||||||||    
T  2894753 tgttcatgtataagctatttctataacaaaagataaattaaagttgaactgttttca 2894809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 28165114 - 28165218
Alignment:
Q  185 catggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggt 282  Q
    ||||| ||||||||| |||||||||||||||| |||| ||||| ||| | | |||||| |||||| | ||  ||| ||||||  |||||||||| | |||    
T  28165114 catggagagcttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccataagctatctcaaagagtctcataagtgcttatgctggt 28165213  T
Q  283 agata 287  Q
    |||||    
T  28165214 agata 28165218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 28178910 - 28178947
Alignment:
Q  127 atgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaag 28178947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 30496744 - 30496797
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||| |||||||||||||||  |||| ||||| ||||||||||||| ||||    
T  30496744 aaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctc 30496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 33894562 - 33894599
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  33894562 ttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 34035956 - 34036009
Alignment:
Q  201 aaataagttgaaaacaacttacgaac-atgtcataaactgttttcataagttct 253  Q
    ||||||||||||||||||||| |||| |||||||||  | ||||||||||||||    
T  34035956 aaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttct 34036009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 39345503 - 39345576
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| ||||||| ||||| ||||||| | |||||||||||||||||| ||| |  ||| | |||||||||||    
T  39345503 cttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccatgaactctaccaaacagtctca 39345576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 44615170 - 44615073
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    |||||||||||| ||||| | | | ||| ||||| ||||||  |||||||| |||  | |||||||||||  |||||||||||| |||||| ||||||    
T  44615170 aactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcctgaacagt 44615073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 48157253 - 48157212
Alignment:
Q  123 gtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||| |||||||||| | ||||||||||||||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaataaag 48157212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 2223084 - 2223120
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaa 158  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  2223084 tgtttatgtataagctatttctataacaaaagataaa 2223120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 3968324 - 3968288
Alignment:
Q  127 atgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||||||||||  ||||||||||||||||    
T  3968324 atgtataagttatttctatagcaaaagataaaataaa 3968288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 4591478 - 4591518
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||||||| ||| ||||| ||||||||||||||||    
T  4591478 tgtttatgtataagctatctctataacaaaagataaaataa 4591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 4966185 - 4966261
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||  ||||||||||||| | |||| ||||||   ||||  ||||| |||||||||||||||||    
T  4966185 gagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctcctaaacagtctca 4966261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 6857369 - 6857317
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||||||||||||||||| | ||||| ||||| |||||| |||||| ||||    
T  6857369 aataagttgaaaacaacttatggacatggcataagctgtttccataagctctc 6857317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 22759123 - 22759167
Alignment:
Q  123 gtttatgtataagttatttctattacaaaagataaaataaaggaa 167  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||||    
T  22759123 gtttatgtttaagctatttgtataacaaaagataaaataaaggaa 22759167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 28521053 - 28520934
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatag 288  Q
    ||||||||| |||  || |||||||| ||||   |||||||||||  ||||| ||||||||||||||| ||||||   ||| ||||||||  ||||| |     
T  28521053 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataagttctcctaagcagtcttagaagggcttatacttgtagaaaa 28520954  T
Q  289 actcaaataattcaatccaa 308  Q
     ||||| |||||||||||||    
T  28520953 gctcaagtaattcaatccaa 28520934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 35007636 - 35007699
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| ||||||||||||| |||||||   |||  ||| ||||||||||||||||| ||||||||    
T  35007636 aaataagctgaaaacaacttatgaacatg---taagttgtgttcataagttctcctaaccagtctca 35007699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 36537957 - 36538013
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||  ||||| |||||    
T  36537957 aaaacaacttatgaacatgtcataagttgtttccataagttctctcaaacaatctca 36538013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 39334222 - 39334298
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||  ||||||| | |||||||||||| ||||| |||||  ||| | |||||||||||    
T  39334222 gagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaacagtctca 39334298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 39566237 - 39566173
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||||| ||||||||||||| | |||||| ||||| ||||| |||||| ||| |||||| |||||    
T  39566237 aataagctgaaaacaacttatggacatgtgataaaatgtttccataagctcttctaaactgtctc 39566173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 43153030 - 43152994
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaag 43152994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 43219825 - 43219785
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  43219825 aaaacagcttatgaacatgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 47528082 - 47528026
Alignment:
Q  107 cacttattatactactgtttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||| | |||||||||||||| ||||||||| |  || |||||||||||    
T  47528082 cacttattatacaagtgtttatgtataagctatttctataattaaggataaaataaa 47528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 49060478 - 49060518
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||| ||||||||| |||||| |||||||||||    
T  49060478 tttatgtataagctatttctataacaaaaaataaaataaag 49060518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 308
Target Start/End: Complemental strand, 10199449 - 10199330
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca--gtctcaagtgcttatacaggtagatag 288  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| || ||||||| |||||||| ||| |  ||| |||||||||||    |||||||     
T  10199449 gagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagataa 10199350  T
Q  289 actcaaataattcaatccaa 308  Q
     ||||||||| |||||||||    
T  10199349 gctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 35925713 - 35925780
Alignment:
Q  185 catggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttc 252  Q
    ||||| ||| ||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  35925713 catggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 37811858 - 37811944
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||||||| ||  | ||||| ||||| ||| ||||||||||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  37811858 ctgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctc 37811944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 38001643 - 38001701
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||    
T  38001643 tgaaaacaacttatgaacaggtcataagctgttttcataagttctcccaaacagtctca 38001701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 4549888 - 4549948
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag 262  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataatctgttttcagaagttctcccaaacag 4549948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 31517781 - 31517705
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||| |  |||||| ||||||||||| |||||||||||    
T  31517781 gagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctca 31517705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 38170731 - 38170655
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| | ||| ||| ||||||||||||| ||||||||||||| ||||||||||||| ||||| || ||||||||    
T  38170731 gagcttaggaaaacaagctgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctca 38170655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 2777898 - 2777997
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| || ||||||| ||| || |||||| ||||||| |||||||  |||| ||| | |||||||  || |||||||||||||||||||||||||||    
T  2777898 ctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagttctcctaaacagtctca 2777997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 27140484 - 27140558
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttt 242  Q
    ||||||| || || || ||||| ||||||||||||||||| ||||||||||||| | ||||||||||| ||||||    
T  27140484 ctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgttt 27140558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 48830210 - 48830168
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaag 48830168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 28689492 - 28689376
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag--tctcaagtgcttatacaggtagataga 289  Q
    |||||||| ||||||| ||||||||||||| | ||||||||||| |||||| | |||||||||  ||||||  ||| ||||| | |||| |||||||| |    
T  28689492 agcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctctaaaacagtatctgaagtgttaataccggtagataaa 28689393  T
Q  290 ctcaaataattcaatcc 306  Q
    || |||| | |||||||    
T  28689392 ctgaaatcagtcaatcc 28689376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 4445737 - 4445813
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| || |||||||||||||||| |||  |||||||| |||| ||| |||||||| |||||| |||||||||||    
T  4445737 gagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctca 4445813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 308
Target Start/End: Original strand, 6292522 - 6292640
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc--aagtgcttatacaggtagatag 288  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||||| ||||||| | || |||||| ||||| ||||  ||||||||||    |||||||     
T  6292522 gagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt-aaaaattctcccaaacaatctcaaaagtgcttatgtcagtagataa 6292620  T
Q  289 actcaaataattcaatccaa 308  Q
     ||||||||| |||||||||    
T  6292621 gctcaaataagtcaatccaa 6292640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 43338125 - 43338213
Alignment:
Q  171 ttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaa 259  Q
    ||||||| || |||||||| ||||||||| ||||| | |||||| |  ||| ||||||||||||| |||||| |||||||||| |||||    
T  43338125 ttttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgtttccataagttcttctaaa 43338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 11695891 - 11695946
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcata 247  Q
    |||||||| |||||||||||||||| |||| | |||||||||||||||||| ||||    
T  11695891 agcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccata 11695946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 32515488 - 32515374
Alignment:
Q  185 catggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggt 282  Q
    ||||| ||||||||  | |||||||||||||||||||   ||||||||||  |||||| |||||| ||||| |||||||||  |||||||||||    ||    
T  32515488 catggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatgttagt 32515389  T
Q  283 agatagactcaaata 297  Q
    ||||| |||||||||    
T  32515388 agataaactcaaata 32515374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 172605 - 172495
Alignment:
Q  203 ataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct-----caagtgcttatacaggtagatagactcaaata 297  Q
    ||||||| |||||| | || ||||||| |||||||||||||||||| |||||| | ||||| |     ||||||||||  || ||||||| |||||||||    
T  172605 ataagttaaaaacagcctatgaacatgccataaactgttttcataaattctcccagacagtgtcacaacaagtgcttaggcaagtagataaactcaaata 172506  T
Q  298 attcaatccaa 308  Q
    | |||||||||    
T  172505 agtcaatccaa 172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 4576837 - 4576907
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtc 264  Q
    |||||| ||||||| |||| ||||||||  ||||||||||||||| |||||||||||| ||  ||||||||    
T  4576837 cttatgaaaataagctgaacacaacttataaacatgtcataaactattttcataagttgtctcaaacagtc 4576907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 14443482 - 14443540
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||| ||||||| |||||||||||||||||||||| | || |||||||||||| ||||    
T  14443482 ttatgaaaataaggtgaaaacaacttacgaacatgttaaaagctgttttcataaattct 14443540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 15360830 - 15360872
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  15360830 tgtttatgtattagttatttctataacaaaagataaaataaag 15360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 25479610 - 25479668
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    ||||||||| ||||||| ||||||||||| | ||||||||||||| || ||||||||||    
T  25479610 gagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 37593725 - 37593651
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||| ||||||| |||||||| |||| |||||||||||||  ||| ||||| |||| ||| |||||||||    
T  37593725 gagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtct 37593651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 41184688 - 41184614
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||||| |||||| ||| || ||||||| || ||||||||||||||  ||||||||||||    
T  41184688 cttatgaaaataagttgaaaaaaacttatgaaaattgtcataagctattttcataagttctagtaaacagtctca 41184614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 49517006 - 49517048
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  49517006 tgtttgtgtataagttatttctataacaaaagataaaataaag 49517048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 4549260 - 4549333
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||| ||||||| |||||||||||||   |||||||||||| ||||| || |||||||| ||| ||||||    
T  4549260 agcttatggaaataagctgaaaacaacttatagacatgtcataaattgtttccaaaagttctcttaagcagtct 4549333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 11639457 - 11639380
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    ||||||||| ||||||| | |||||| |||| | ||||||||||| ||||||||||||| ||| |||||  |||||||    
T  11639457 gagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctcttctaaattgtctcaa 11639380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 31118075 - 31118132
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||| ||||||| ||||||||||| | |||||||||||||  ||||||||||||||    
T  31118075 cttatggaaataagctgaaaacaactgatgaacatgtcataagatgttttcataagtt 31118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 35669005 - 35669075
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| ||||||||||||||||| ||| | |||| |||||| ||| ||||||||||||||  |||||||||||    
T  35669005 ttatggaaataagttgaaaacaatttatggacatatcataagctgctttcataagttctc--aaacagtctca 35669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 39596626 - 39596682
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    ||||||||  ||||||||||||| || ||||| |||||||||||||||||||||||||    
T  39596626 gagcttataaaaataagttgaaa-cagcttaccaacatgtcataaactgttttcataa 39596682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 4920810 - 4920734
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttca-taagttctcctaaacagtctca 267  Q
    |||||||| ||||||| | |||||||| || ||||||||||||| ||||||||| ||| |||||| ||| |||||||    
T  4920810 agcttatgaaaataagctaaaaacaacctaagaacatgtcataacctgttttcattaaattctcccaaagagtctca 4920734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 6262049 - 6262125
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| || |||||||||||||| | |||| |||||||||||||  |||| ||||||| |||  ||||||||||||    
T  6262049 gagcttgtggaaataagttgaaaatagcttatgaacatgtcataagttgttctcataagctcttgtaaacagtctca 6262125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 27140421 - 27140461
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  27140421 tgtttatgtgtaagttatttctataacaaaagataaaataa 27140461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 33108663 - 33108587
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||||||||||||||||| |  |||| ||| |  |||||||||||||||| ||| || ||||||    
T  33108663 gagcttatggaaataagttgaaaacaacttatggtcatggcatgagttgttttcataagttcttctatacggtctca 33108587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 49557083 - 49557119
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49557083 tgtataagttatttctataacaaaagataaaataaag 49557119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 2295163 - 2295202
Alignment:
Q  228 tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctca 2295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 29007756 - 29007681
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||  ||||||| ||||||||||||| |||||| ||||||| ||||| || ||| | ||| |||||||||||    
T  29007756 agcttatcgaaataagctgaaaacaacttatgaacatatcataaattgtttccaaaagctatccaaaacagtctca 29007681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 33723422 - 33723347
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||||| ||||||| |||||||| || | ||||||||||| | |||||| |||||||| ||| || ||||||||    
T  33723422 agcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctca 33723347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 36641814 - 36641853
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaag 36641853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 39270489 - 39270402
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    |||||||||| || || ||| | |||| |||| |||||||||||||||| |||| | ||||| || || ||||||||||||| |||||    
T  39270489 ctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctctcc 39270402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 50319231 - 50319270
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaag 50319270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 4200165 - 4200207
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  4200165 tgtttatatataagttatttttataacaaaagataaaataaag 4200207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 7941638 - 7941712
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||||| | |||  ||||| |||||||| |||||||||||| |||| | |||||||||||    
T  7941638 cttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacagtctca 7941712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 12481532 - 12481594
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||||| |||||| |||||||||||||   || |||| ||||||| ||||||||||||||    
T  12481532 gagcttatgaaaataacttgaaaacaacttgttaagatgtgataaactattttcataagttct 12481594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 16982070 - 16982028
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||| ||||||| || ||||||||||||||||||    
T  16982070 tgtttatgtataacttatttcgataacaaaagataaaataaag 16982028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 23895275 - 23895313
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  23895275 ttatgtataagctatttctataacaaaagataaaataaa 23895313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 26779963 - 26779890
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||| ||||||||||||||||||||| | ||  |||||||  |||||||| || |||||| ||||||||||||    
T  26779963 cttatgaaaataagttgaaaacaacttatgtac-ggtcataaggtgttttcagaaattctcccaaacagtctcaa 26779890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 30257722 - 30257788
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| |||||||| |||| ||||||||||||||   |||| ||||| ||||||||| |||||||    
T  30257722 aaataagctgaaaacagcttatgaacatgtcataaaagatttttataagctctcctaaatagtctca 30257788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 36151546 - 36151496
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgtt 241  Q
    ||||||||| ||||||||||||||||  ||| | |||||||||||||||||    
T  36151546 gagcttatgaaaataagttgaaaacaggttatggacatgtcataaactgtt 36151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 47917275 - 47917309
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||||||||||||||| |||||||||||||    
T  47917275 aaataagttgaaaacaacttatgaacatgtcataa 47917309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 48536721 - 48536655
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| ||| | |||||||| ||||||  |||| || |||||||||||||||| |||||||||||    
T  48536721 aaataagctgatagcaacttacaaacatgcaataagctattttcataagttctcccaaacagtctca 48536655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 49938779 - 49938853
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacat-gtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||||||||| | |||  ||| || ||||||| ||||||||||||||||||| ||||| |||||    
T  49938779 cttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaacaatctca 49938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 3887670 - 3887601
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacag 262  Q
    |||||| ||||||||| |||||| |||| ||||| ||||||||  |||||||||||||||| | ||||||    
T  3887670 cttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacag 3887601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 5592004 - 5591899
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct-caagtgcttatacaggtagatagactc 292  Q
    |||||| |||||| ||||||||  |||| | || |||||||| ||||||||||||| ||||  ||||||||| ||  |||||||||  |||||||  |||    
T  5592004 cttatggaaataaattgaaaacggcttatgcacgtgtcataagctgttttcataagctctctcaaacagtctacacatgcttataccagtagataagctc 5591905  T
Q  293 aaataa 298  Q
    ||||||    
T  5591904 aaataa 5591899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 6031514 - 6031445
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaaca 261  Q
    |||||| | ||||||| |||||| |||||| || || ||||||| ||||||||||||| ||| |||||||    
T  6031514 agcttacgaaaataaggtgaaaagaacttatgagcacgtcataagctgttttcataagctcttctaaaca 6031445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 7137062 - 7136977
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    |||||||||| || || | ||| || |||||| ||||||| |||||| |||||| ||| ||||||||| |  ||||||||||||||    
T  7137062 ctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataagttct 7136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 29635386 - 29635439
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||| |||||||||||||  ||||||||||||  ||||||||||| |||||    
T  29635386 aaataagctgaaaacaacttataaacatgtcataacttgttttcataaattctc 29635439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 34290268 - 34290329
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    |||||| ||||||| ||||||||||||| ||| ||||||||| || |||| |||| ||||||    
T  34290268 cttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattctcc 34290329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Original strand, 36070257 - 36070286
Alignment:
Q  238 tgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||||||||||||||||||||||    
T  36070257 tgttttcataagttctcctaaacagtctca 36070286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 38503503 - 38503442
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaac-atgtcataaactgttttcataagttctc 254  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||  |||||| |||||||||||    
T  38503503 cttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttctc 38503442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 38882950 - 38882881
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaac-atgtcataaactgttttcataagttctcctaaacag 262  Q
    |||||| |||||||||||||||| |||| |||| || | |||| |||||||||||| ||||| |||||||    
T  38882950 cttatgaaaataagttgaaaacaccttatgaacaatttgataatctgttttcataacttctcataaacag 38882881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 45975723 - 45975796
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||| ||||||| |||||||| |||| ||| | ||| ||| |||||||||||| |||||||| ||||||||||    
T  45975723 ttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttctcctgaacagtctca 45975796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 3924657 - 3924713
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    ||||| |||||||  ||||||||||||  ||||| ||||||| ||||||||||||||    
T  3924657 ttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataagtt 3924713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 5276322 - 5276366
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||| | |||||| |||||||||||||| |||||||||||||    
T  5276322 gagcttaagaaaataacttgaaaacaacttatgaacatgtcataa 5276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 5720992 - 5721028
Alignment:
Q  228 tgtcataaactgttttcataagttctcctaaacagtc 264  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  5720992 tgtcataagctgttttcataagttctcccaaacagtc 5721028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 11941296 - 11941368
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||||| |||||||| |||| ||||| ||| |||| || |||||||||| ||||| |||||||||||    
T  11941296 tatgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctca 11941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 12641743 - 12641795
Alignment:
Q  193 gcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttca 245  Q
    ||||||| ||||||| |||||||||||||||||||| ||| ||  ||||||||    
T  12641743 gcttatgaaaataagatgaaaacaacttacgaacatatcacaagatgttttca 12641795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 12763386 - 12763426
Alignment:
Q  225 acatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||||| |||||||| |||||||||| |||||||||    
T  12763386 acatgtcataagctgttttcgtaagttctccaaaacagtct 12763426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 14737829 - 14737797
Alignment:
Q  132 taagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||||||||||||    
T  14737829 taagttatttctataacaaaagataaaataaag 14737797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 17420242 - 17420306
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||||||||||| ||| | |||||| ||||  |||||||||||| ||| | |||||||||    
T  17420242 aaataagttgaaaacaatttatggacatgtaataagttgttttcataagctcttcaaaacagtct 17420306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 23409874 - 23409822
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||| ||||||||||||   |||||||| |||||| ||||||||||||||    
T  23409874 aaataagatgaaaacaacttttaaacatgtcgtaaactattttcataagttct 23409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 25707098 - 25707138
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  25707098 tttatctataagatatttctataacaaaagataaaataaag 25707138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 28935917 - 28935841
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| | |||| |||||| | |||||||||||||||  |  ||||| ||||| |||||||||||    
T  28935917 gagcttatggaaataagctaaaaaaaacttatggacatgtcataaactgactctataagctctcccaaacagtctca 28935841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 33186091 - 33186051
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||| ||||||||| ||||||||||||| ||||||||||||    
T  33186091 tgttcatgtataagctatttctattacagaagataaaataa 33186051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 35017605 - 35017649
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||    
T  35017605 gagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 36151637 - 36151597
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||| |||||| || ||||||||||||||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaag 36151597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 37593803 - 37593763
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||||||| ||||||||| ||| ||||||||||||    
T  37593803 tgtttatgtataaggtatttctataacacaagataaaataa 37593763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 38247094 - 38247030
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    ||||||||  || |||||||||||||||||| |||| ||| ||||   |||||||||||||||||    
T  38247094 gagcttataaaagtaagttgaaaacaacttatgaacgtgtaataagtggttttcataagttctcc 38247030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 41638329 - 41638273
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||||  || ||| |||||||||||||||||||  ||||| |||||||||||    
T  41638329 aaaacaacttttgagcatatcataaactgttttcataatctctcccaaacagtctca 41638273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 42556760 - 42556724
Alignment:
Q  127 atgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  42556760 atgtataagttatttctatgacaaaagatgaaataaa 42556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 46252723 - 46252679
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||    
T  46252723 gagcttatgaaaataacctgaaaacaacttatgaacatgtcataa 46252679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 47498877 - 47498809
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaaca 261  Q
    |||||| ||||||| | ||||||||||| ||||| | |||||| || |||||||||||||||| |||||    
T  47498877 cttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaaca 47498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 47877139 - 47877183
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaa 236  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||    
T  47877139 agcttatgaaaataagctgaaaacaacttatgagcatgtcataaa 47877183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 48748356 - 48748285
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| ||||||| ||||||||||||| |||| ||| ||||||||| | | |||||||| | |||||||    
T  48748356 gagcttatggaaataagctgaaaacaacttatgaacttgt-ataaactgtctccgtaagttcttccaaacagt 48748285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 51929467 - 51929431
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  51929467 atgtcataagctgttttcataagttctcttaaacagt 51929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 31624123 - 31624181
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  31624123 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 265
Target Start/End: Original strand, 34403884 - 34403958
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||||||| ||||||| |||||||| |||| |||||||||||||  ||||||| ||| ||||||||||||||||    
T  34403884 gagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtct 34403958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 769143 - 769243
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| || |||| || ||| |||| | || ||||||||||||| |||| |||||||||||||  |||||||||||||||  | |||||||||    
T  769143 aactgttttcataagctaacttgagga-cttaagaaagtaagttgaaaacagcttatgaacatgtcataagatgttttcataagttcatccaaacagtct 769241  T
Q  266 ca 267  Q
    ||    
T  769242 ca 769243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 2460197 - 2460116
Alignment:
Q  186 atggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||| ||||||||| |||||||||||||||||||||   |||||||||||  ||||| |||||| ||||  |||||||||||    
T  2460197 atggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctca 2460116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 33089510 - 33089611
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||||||||| || || | |||||||| |||| |||||||   |||||||||||  |||||||| ||| ||||||||||||||||||  ||| |||||    
T  33089510 aactgttttcataagctatcttggggagcctatgaaaataagcgtaaaacaacttataaacatgtcctaagctgttttcataagttctctgaaatagtct 33089609  T
Q  266 ca 267  Q
    ||    
T  33089610 ca 33089611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 33887861 - 33887922
Alignment:
Q  193 gcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| || ||||||||| |||||    
T  33887861 gcttatggaaataagttgaaaacaacttgtgaacatgtcataagctattttcataaattctc 33887922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 7931767 - 7931699
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaa 259  Q
    ||||||| | ||||||| ||||||||||||| |||||||||||||  |||||||||||| ||| |||||    
T  7931767 gagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctcttctaaa 7931699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 24836331 - 24836291
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  24836331 tttatgtataagttatttctataacaaaagataaaataaag 24836291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 31583709 - 31583785
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||||| ||||||||||||||||||||| | ||||||||| | | ||||  ||||| ||||| ||||||||||||    
T  31583709 agcttatggaaataagttgaaaacaacttatggacatgtcattagcggtttaaataagctctccaaaacagtctcaa 31583785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 33832309 - 33832237
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||| ||||||| | |||||||||||  ||||||||||||  ||||||||||||||||| ||||||| |||||    
T  33832309 tatgaaaataagctaaaaacaacttataaacatgtcataagttgttttcataagttctcttaaacagactcaa 33832237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 20368218 - 20368147
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    |||||| |||||||||||||  | |||| |||||||||||||  |||||||||||||||||| ||| |||||    
T  20368218 cttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaatagtct 20368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 32171447 - 32171337
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct-- 265  Q
    |||||||||||||||| | |||  |||||||| ||||||| |||||| | |||  | || |||||||| ||||||||||||| ||||  |||||||||      
T  32171447 ctgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcg 32171348  T
Q  266 caagtgcttat 276  Q
    |||||||||||    
T  32171347 caagtgcttat 32171337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 34882459 - 34882388
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtc 264  Q
    |||||| |||||||| |||||||||||| ||||| ||||||||  | ||||||||| |||||||||||||||    
T  34882459 cttatgaaaataagtggaaaacaacttatgaacaatgtcataacttattttcataaattctcctaaacagtc 34882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 1575928 - 1575986
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||| ||||||||| |||||| |||| |||||||||||||  ||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 5554899 - 5554861
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaat 160  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5554899 tgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 8035188 - 8035114
Alignment:
Q  192 agcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    |||||| | ||||||||||||||||| ||| || ||||||||||  ||||||| |||||||||| ||| ||||||    
T  8035188 agcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttctcccaaatagtctc 8035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 33068692 - 33068655
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33068692 ttatgtataagttatttctataacaaaagataaaataa 33068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 2455839 - 2455954
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagatag 288  Q
    ||||||||| |||||||||||||| |  ||| |  ||||||||||  ||||| |||||| ||| ||||||| |||  ||||||||||| | ||||||||     
T  2455839 gagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctcttctaaacaatctcgcaagtgcttatgccggtagataa 2455938  T
Q  289 actcaaataattcaat 304  Q
     ||||||||| |||||    
T  2455939 gctcaaataagtcaat 2455954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 6536976 - 6537020
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  6536976 gagcttatggaaataagctgaaaacaacttatgaacatgtcataa 6537020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 6647416 - 6647460
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||    
T  6647416 gagcttatgaaaataagttgaaaacatcttatgaacatgtcataa 6647460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 9559580 - 9559502
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacg---aaca-tgtcataaactgttttcataagttctcctaaacagtctcaa 268  Q
    |||||| |||||||||||||||| ||||||   |||| ||||||||  |||||||||||||||||| ||| ||||||||    
T  9559580 cttatgaaaataagttgaaaacagcttacgcagaacaatgtcataagttgttttcataagttctcccaaatagtctcaa 9559502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 13908492 - 13908536
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  13908492 gagcttatgaaaataagctgaaaacagcttacgaacatgtcataa 13908536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 17770645 - 17770593
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||| |||||||    
T  17770645 aaataagttgaaagcaccttatgaacatgtcataagctgttttcacaagttct 17770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 34544582 - 34544542
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  34544582 tttatgtataagttatttctataacaaaagataaactaaag 34544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 507159 - 507198
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  507159 ttatgtataaattatttctataacaaaagataaaataaag 507198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 696642 - 696693
Alignment:
Q  202 aataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    |||||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  696642 aataagctgaaaacagcttatgaacatgtcataagctgttttgataagttct 696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 1575783 - 1575842
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatg-tcataaactgttttcataagttct 253  Q
    ||||| |||||||||||||||| |||| | ||||| |||||| |||||||||||||||||    
T  1575783 ttatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataagttct 1575842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 4080955 - 4081002
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataa 248  Q
    ||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  4080955 aaataagttgaaaacaacttatgaacatggcataagttgttttcataa 4081002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 9912229 - 9912158
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaaca-tgtcataaactgttttcataagttctcctaaacagtc 264  Q
    |||||| ||||||| | |||||| |||| ||||| |||||||| ||| ||||||||||||||| ||||||||    
T  9912229 cttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacagtc 9912158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 17241313 - 17241254
Alignment:
Q  171 ttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgt 230  Q
    |||||||||| || | ||| ||| ||||| ||||||||||||||||||||| ||||||||    
T  17241313 ttttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 31672012 - 31672047
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||||||||| |||||||||||||||||    
T  31672012 tgtataagttatttctataacaaaagataaaataaa 31672047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 5566213 - 5566163
Alignment:
Q  196 tatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcat 246  Q
    |||| ||||||||||||||||||||| | |||||| |||| ||||||||||    
T  5566213 tatggaaataagttgaaaacaacttatggacatgtaataagctgttttcat 5566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 9559672 - 9559634
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaa 163  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaa 9559634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 10476153 - 10476087
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||| ||||||||| |||||| |||||||| |  ||||| |||||| |||| ||||||||||||    
T  10476153 aaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcataaacagtctca 10476087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 10657449 - 10657495
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    ||||||||||||| |||||||| ||||| ||||||||||| ||||||    
T  10657449 tgaaaacaacttatgaacatgttataaattgttttcataaattctcc 10657495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 28641790 - 28641732
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    ||||||||| ||||||| | |||||| |||| |||||||| |||| |||||||||||||    
T  28641790 gagcttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataag 28641732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 32975914 - 32975956
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||||||||||| | |||||| |||||||||||    
T  32975914 tgtttatgtataagttatttctgtaacaaaatataaaataaag 32975956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 33500519 - 33500445
Alignment:
Q  194 cttatgcaaataagttgaaaa-caacttacgaacatgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    |||||| |||||||| ||||| ||||||| | |||||||||||| |||||||||||| || |  |||||||||||    
T  33500519 cttatggaaataagtcgaaaaacaacttatgcacatgtcataaattgttttcataagctccctcaaacagtctca 33500445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 33500616 - 33500574
Alignment:
Q  121 ctgtttatgtataagttatttctattacaaaagataaaataaa 163  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||    
T  33500616 ctgtttatgtataagctatttctataacaaaagataaagtaaa 33500574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 34429836 - 34429782
Alignment:
Q  110 ttattatactactgtttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||| ||||| || ||||||||||||||||||||| | || |||||||||||||    
T  34429836 ttattgtactagtgattatgtataagttatttctataataagagataaaataaag 34429782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 3738073 - 3738174
Alignment:
Q  166 aactgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct 265  Q
    ||||| |||||| ||||| ||| || |||||||  ||||||||||||| || |||| | ||||||||||| |||||| || ||| |||   |||||||||    
T  3738073 aactgctttcatcagttaccataggcagcttattgaaataagttgaaagcagcttatggacatgtcataagctgtttccacaagatctttcaaacagtct 3738172  T
Q  266 ca 267  Q
    ||    
T  3738173 ca 3738174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 5731616 - 5731696
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtct--caagtgcttatacaggtagata 287  Q
    ||||||||||||||| |||| |||||| || |||||||||| ||| | ||||| |||  ||||||||||||| | ||||||    
T  5731616 tgaaaacaacttacggacatatcataagctattttcataagctctaccaaacactctcacaagtgcttataccgatagata 5731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 10616736 - 10616683
Alignment:
Q  209 tgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacag 262  Q
    |||||||| |||| |||||||||||||  |||||| ||||||||||| ||||||    
T  10616736 tgaaaacagcttatgaacatgtcataaggtgttttgataagttctcccaaacag 10616683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 32386170 - 32386089
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataag 249  Q
    |||||||||||||||| | |||  |||||||| || |||| ||||||||||||| | ||||||  ||| |||||| ||||||    
T  32386170 ctgttttcattagttatcctggaaagcttatgaaagtaagctgaaaacaacttatggacatgttgtaagctgtttccataag 32386089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 32861456 - 32861493
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    |||||||||  |||||||||||||||||||||||||||    
T  32861456 ttatgtatagcttatttctattacaaaagataaaataa 32861493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 33116541 - 33116578
Alignment:
Q  122 tgtttatgtataagttatttctattacaaaagataaaa 159  Q
    |||||||||||||||||||||| | |||||||||||||    
T  33116541 tgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 35070508 - 35070435
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagtc 264  Q
    ||||||||| |||||||||||||||| |||| || | || | ||| ||||||||||  ||||||| ||||||||    
T  35070508 gagcttatgaaaataagttgaaaacagcttatgatcttgccttaagctgttttcatttgttctcccaaacagtc 35070435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 696491 - 696531
Alignment:
Q  211 aaaacaacttacgaacatgtcataaactgttttcataagtt 251  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  696491 aaaacagcttatgaacatgtcataagctgttttcataagtt 696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 1275155 - 1275255
Alignment:
Q  168 ctgttttcattagttaacatggggagcttatgcaaataagttgaaaa-caacttacgaacatgtcataaactgttttcataagttctcctaaacagtctc 266  Q
    ||||||||||  |||| | ||| ||||||||| ||||||| |||||| |||| || | ||||||||||| ||||||| | |||| |||| ||||| ||||    
T  1275155 ctgttttcatatgttatcctggagagcttatggaaataagctgaaaaacaacgtaaggacatgtcataagctgttttaagaagtcctcccaaacaatctc 1275254  T
Q  267 a 267  Q
    |    
T  1275255 a 1275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 2206532 - 2206568
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  2206532 tgtataagttatttttataacaaaagataaaataaag 2206568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 4420555 - 4420595
Alignment:
Q  124 tttatgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||| || |||||| ||||||||||||||||||    
T  4420555 tttatgtataagctacttctataacaaaagataaaataaag 4420595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 4420672 - 4420716
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| |||||||| |||| |||||||||||||    
T  4420672 gagcttatggaaataagctgaaaacagcttatgaacatgtcataa 4420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 5328920 - 5328952
Alignment:
Q  132 taagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||||||||||||||||||    
T  5328920 taagttatttctataacaaaagataaaataaag 5328952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 9027607 - 9027651
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||||    
T  9027607 gagcttatgaaaataagctgaaaacaacttatggacatgtcataa 9027651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 9668026 - 9667982
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataa 235  Q
    ||||||||| |||||||||||||||| |||| | |||||||||||    
T  9668026 gagcttatggaaataagttgaaaacagcttatggacatgtcataa 9667982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 10616582 - 10616518
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcc 255  Q
    ||||||||  ||||||| |||| |||||||||| |||||||||||  ||||| |||||| |||||    
T  10616582 gagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcc 10616518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 21024243 - 21024303
Alignment:
Q  194 cttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctc 254  Q
    |||||| |||||||||||||||||| || ||| ||||||||| | |||| | |||||||||    
T  21024243 cttatgaaaataagttgaaaacaacatatgaatatgtcataagcggtttccgtaagttctc 21024303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 27909679 - 27909623
Alignment:
Q  191 gagcttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcata 247  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||| | ||||| ||||    
T  27909679 gagcttatggaaataagctgaaaacaacttatggacatgtcatatattgtttccata 27909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 28531669 - 28531633
Alignment:
Q  128 tgtataagttatttctattacaaaagataaaataaag 164  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  28531669 tgtataagttatttatataacaaaagataaaataaag 28531633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 32386626 - 32386578
Alignment:
Q  169 tgttttcattagttaacatggggagcttatgcaaataagttgaaaacaa 217  Q
    ||||||||||||||| | ||| ||||||||| ||||||| |||||||||    
T  32386626 tgttttcattagttatcctggagagcttatgaaaataagctgaaaacaa 32386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 34939777 - 34939845
Alignment:
Q  195 ttatgcaaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttctcctaaacagt 263  Q
    ||||| ||||||| ||||||||| ||| | ||||||||||| |||||| | |||| ||||| |||||||    
T  34939777 ttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagt 34939845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 1205 - 1166
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  1205 ttatgtataagctatttctataacaaaagataaaataaag 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 2770 - 2809
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  2770 ttatgtataagctatttctataacaaaagataaaataaag 2809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 27515 - 27554
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataaag 164  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaag 27554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 104265 - 104228
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaataa 162  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  104265 ttatgtataagttatttctataacaaaaaataaaataa 104228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 42556 - 42592
Alignment:
Q  125 ttatgtataagttatttctattacaaaagataaaata 161  Q
    |||||||||||| |||||||| |||||||||||||||    
T  42556 ttatgtataagtcatttctataacaaaagataaaata 42592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 24687 - 24727
Alignment:
Q  227 atgtcataaactgttttcataagttctcctaaacagtctca 267  Q
    ||||||||| ||||||| ||||||||||| |||||||||||    
T  24687 atgtcataagctgttttgataagttctcccaaacagtctca 24727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 98671 - 98619
Alignment:
Q  201 aaataagttgaaaacaacttacgaacatgtcataaactgttttcataagttct 253  Q
    |||||||||||||||| |||| ||||||||||||| || ||||| ||| ||||    
T  98671 aaataagttgaaaacagcttatgaacatgtcataagctattttcgtaaattct 98619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University