View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16430_high_7 (Length: 316)
Name: NF16430_high_7
Description: NF16430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16430_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 21514030 - 21514341
Alignment:
| Q |
8 |
ggcaatgacatacaggagtataacgaaacttccttctaggtggctcatcagaaacatcctcagcagaagaagagttagcaaccggagtccaacgacggag |
107 |
Q |
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| T |
21514030 |
ggcaataacatacaggagtataacgaaacttccttctaggtggctcatcagaaacatcctcagcagaagaagaattcgcaaccggagtccaacgacgaag |
21514129 |
T |
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| Q |
108 |
aagtaaacgagatttctcgttactattatccttgttgtttttcttgttgttgctaaacgaagaaggtgaaacatgaacccatttcttctcccatttacga |
207 |
Q |
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| T |
21514130 |
aagtaaacgagatttctcgttactattatccttattatttttcttgttgttgttaaacgaagaaggtgaaacatgaacccatttcttctcccatttacga |
21514229 |
T |
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| Q |
208 |
acaggaccattgaacactgcaggtgcaccgtagcgtgaagatgctctacccaacctcgtagaacccactgtctccattg---tgttgtcggtgaaattga |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
21514230 |
acaggaccattgaacactgcaggtgcaccgtagcgtgaagatgctctacccaacctcgtagaacccactgtctccattgtgttgttgtcggtgaaattga |
21514329 |
T |
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| Q |
305 |
atggaacagaac |
316 |
Q |
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|||||||||||| |
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| T |
21514330 |
atggaacagaac |
21514341 |
T |
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