View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16431_low_15 (Length: 314)
Name: NF16431_low_15
Description: NF16431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16431_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 31037122 - 31036835
Alignment:
| Q |
1 |
agagctgagagagaatgttcaaaaaggaatagtaccttttccttcgtctacaaactacatcagaatgagaatgtacctgtaatatactatgttttcaact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31037122 |
agagctgagagagaatgttcaaaaaggaatagtaccttttccttcgtctacaaactacatcagaatgagaatgtacctgtaatatactatgttttcaact |
31037023 |
T |
|
| Q |
101 |
aaggtaccacacaagctttaagaaacttgaccaaaccttaatgtcaaataatccaactttgtatcagcttctctatatacttttacacgatgcaaccttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
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| T |
31037022 |
aaggtaccacacaagctttaagaaacttgaccaaaccttaatgtcaaataatccaactttgtctcagcttctctatatacttttacacgatacaaccttc |
31036923 |
T |
|
| Q |
201 |
tctgtatacgatcttttccattcactggccatcggccctccattagaccaaacgccaacgcctttgccatccagcgcatttgatgagt |
288 |
Q |
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|||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
31036922 |
tctgtatacgattttttccattcactggccctcggccctccattagaccatacgccaacgcctttgccatccagcgcatttgatgagt |
31036835 |
T |
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