View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16431_low_16 (Length: 305)
Name: NF16431_low_16
Description: NF16431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16431_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 3 - 291
Target Start/End: Original strand, 41159555 - 41159843
Alignment:
| Q |
3 |
cacagaaacatcttcaattgaagtgtcagtgcaacatttgtaactccatttaatcaaaaacattgatgcttttgtttcttaagactagaacttgaagtaa |
102 |
Q |
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| T |
41159555 |
cacagaaacatcttcaattgaagtgtcagtgcaacatttgtaactccatttaatcaaaaacattgatgcttttgtttcttaagactagaacttgaagtaa |
41159654 |
T |
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| Q |
103 |
actgccatgtattgttgcaagagctaggtgtgacatcagcagcattccgacttggcaatgatccagaagagtgaaacgatggaagtgttgaattctgaaa |
202 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
41159655 |
actgccatgcattgttgcaagagctaggtgtgacatcagcagcattccgaattggcaatgatccagaagagtgaaacgatggatgtgttgaattctgaaa |
41159754 |
T |
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| Q |
203 |
taagttgagctcatcaatgtcttcttcaacagaaaaaggtggaatttttatagaactcaaaggaggtggatttttccaagtaggaagtg |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41159755 |
taagttgagctcatcaatgtcttcttcaacagaaaaaggtggaatttttatagaactcaaaggaggtggatttttccaagtaggaagtg |
41159843 |
T |
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