View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16431_low_2 (Length: 648)

Name: NF16431_low_2
Description: NF16431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16431_low_2
NF16431_low_2
[»] chr2 (46 HSPs)
chr2 (18-633)||(32085077-32085695)
chr2 (394-636)||(25618550-25618791)
chr2 (395-631)||(20174505-20174740)
chr2 (394-633)||(29719097-29719337)
chr2 (386-633)||(29027481-29027729)
chr2 (394-636)||(15339231-15339475)
chr2 (396-626)||(25885335-25885563)
chr2 (439-636)||(28606041-28606239)
chr2 (386-500)||(17743476-17743590)
chr2 (394-508)||(25888216-25888326)
chr2 (400-636)||(27908981-27909219)
chr2 (384-567)||(11382686-11382869)
chr2 (395-515)||(17349352-17349472)
chr2 (397-499)||(8447051-8447152)
chr2 (386-500)||(45621881-45621995)
chr2 (395-500)||(12953294-12953399)
chr2 (386-630)||(45553115-45553357)
chr2 (385-567)||(13776323-13776503)
chr2 (385-505)||(19200130-19200249)
chr2 (386-625)||(28925507-28925746)
chr2 (402-500)||(30411679-30411777)
chr2 (388-626)||(23011637-23011874)
chr2 (394-500)||(26603350-26603456)
chr2 (400-514)||(25196010-25196127)
chr2 (543-630)||(23933415-23933502)
chr2 (397-499)||(8503071-8503173)
chr2 (426-500)||(24090926-24091000)
chr2 (385-517)||(17635755-17635890)
chr2 (384-499)||(5777200-5777314)
chr2 (396-601)||(31804797-31805004)
chr2 (384-473)||(12557736-12557825)
chr2 (386-496)||(30900848-30900958)
chr2 (395-499)||(28770444-28770548)
chr2 (543-626)||(17890079-17890162)
chr2 (426-500)||(25535299-25535373)
chr2 (543-636)||(26603223-26603317)
chr2 (419-510)||(9774325-9774414)
chr2 (385-594)||(17675534-17675745)
chr2 (426-476)||(25530472-25530522)
chr2 (438-500)||(25920303-25920365)
chr2 (426-500)||(27418391-27418465)
chr2 (384-499)||(5792812-5792926)
chr2 (413-500)||(29142973-29143060)
chr2 (543-636)||(25530577-25530671)
chr2 (385-474)||(17889921-17890009)
chr2 (513-598)||(25887805-25887893)
[»] chr4 (54 HSPs)
chr4 (394-611)||(17671995-17672212)
chr4 (386-636)||(14648880-14649130)
chr4 (386-601)||(17951195-17951410)
chr4 (386-601)||(17955047-17955262)
chr4 (386-626)||(19092280-19092520)
chr4 (398-626)||(19929548-19929777)
chr4 (394-590)||(12578176-12578372)
chr4 (382-633)||(5679186-5679438)
chr4 (386-626)||(22357405-22357649)
chr4 (387-564)||(11490518-11490694)
chr4 (396-567)||(13128808-13128978)
chr4 (398-559)||(22175904-22176064)
chr4 (386-500)||(21323875-21323989)
chr4 (386-499)||(19882625-19882738)
chr4 (386-500)||(13692669-13692783)
chr4 (401-627)||(13908854-13909081)
chr4 (386-630)||(25121096-25121339)
chr4 (386-485)||(15047113-15047212)
chr4 (386-485)||(15107212-15107311)
chr4 (401-499)||(20315000-20315098)
chr4 (396-512)||(11933414-11933529)
chr4 (386-492)||(9737512-9737623)
chr4 (400-611)||(17216816-17217030)
chr4 (386-500)||(16730399-16730513)
chr4 (402-500)||(19492700-19492798)
chr4 (419-636)||(24639324-24639535)
chr4 (402-599)||(15164768-15164964)
chr4 (426-567)||(17337069-17337209)
chr4 (394-636)||(40227770-40228011)
chr4 (401-625)||(17709757-17709978)
chr4 (386-499)||(23080326-23080439)
chr4 (394-497)||(13992879-13992982)
chr4 (403-540)||(19636547-19636682)
chr4 (386-500)||(7582282-7582396)
chr4 (403-499)||(11521192-11521288)
chr4 (385-505)||(20829734-20829853)
chr4 (402-630)||(26115775-26116001)
chr4 (386-483)||(11700587-11700683)
chr4 (386-500)||(9052659-9052772)
chr4 (394-500)||(19562178-19562284)
chr4 (406-473)||(22526369-22526436)
chr4 (412-499)||(1833598-1833681)
chr4 (388-445)||(12318420-12318477)
chr4 (392-473)||(12839807-12839888)
chr4 (580-633)||(22173421-22173474)
chr4 (385-498)||(3774809-3774923)
chr4 (418-481)||(17275833-17275896)
chr4 (383-633)||(8969596-8969838)
chr4 (401-471)||(20317807-20317876)
chr4 (397-471)||(10107007-10107080)
chr4 (397-499)||(15050084-15050185)
chr4 (397-499)||(15104239-15104340)
chr4 (397-471)||(19900576-19900649)
chr4 (429-501)||(10777392-10777464)
[»] chr7 (94 HSPs)
chr7 (385-633)||(7318257-7318507)
chr7 (385-633)||(9574391-9574639)
chr7 (386-633)||(3734581-3734829)
chr7 (407-633)||(8313259-8313488)
chr7 (386-626)||(17153027-17153268)
chr7 (390-633)||(10586890-10587134)
chr7 (386-626)||(15869580-15869820)
chr7 (394-559)||(4986548-4986713)
chr7 (394-559)||(4990646-4990811)
chr7 (394-628)||(18662434-18662667)
chr7 (397-636)||(4785833-4786077)
chr7 (395-633)||(6013587-6013825)
chr7 (394-636)||(16365698-16365942)
chr7 (385-512)||(1584529-1584654)
chr7 (386-625)||(1587666-1587904)
chr7 (393-636)||(5108558-5108801)
chr7 (397-540)||(4818833-4818975)
chr7 (388-499)||(9864327-9864438)
chr7 (394-636)||(9731490-9731733)
chr7 (386-616)||(31492915-31493141)
chr7 (385-500)||(11221164-11221279)
chr7 (400-636)||(18368842-18369080)
chr7 (400-532)||(8054454-8054589)
chr7 (394-636)||(2563811-2564054)
chr7 (400-625)||(8053937-8054158)
chr7 (396-530)||(23099924-23100056)
chr7 (394-603)||(2350643-2350853)
chr7 (386-500)||(8979006-8979120)
chr7 (386-499)||(10584487-10584600)
chr7 (396-512)||(12181603-12181720)
chr7 (403-500)||(13759860-13759957)
chr7 (383-499)||(18449223-18449340)
chr7 (386-499)||(18495358-18495471)
chr7 (386-499)||(21230297-21230410)
chr7 (426-626)||(3190935-3191133)
chr7 (386-473)||(10937586-10937674)
chr7 (384-499)||(9245164-9245279)
chr7 (396-499)||(9500439-9500542)
chr7 (395-502)||(16297818-16297925)
chr7 (394-500)||(3329658-3329764)
chr7 (386-515)||(12329667-12329797)
chr7 (386-630)||(14195842-14196086)
chr7 (426-599)||(7492163-7492337)
chr7 (400-624)||(20582258-20582479)
chr7 (385-472)||(7397180-7397266)
chr7 (384-483)||(9261187-9261286)
chr7 (405-500)||(39273175-39273270)
chr7 (394-636)||(6042454-6042685)
chr7 (426-500)||(11803105-11803179)
chr7 (386-512)||(19153283-19153407)
chr7 (386-512)||(20752682-20752806)
chr7 (386-495)||(14755135-14755244)
chr7 (400-636)||(1848091-1848325)
chr7 (386-468)||(5797496-5797578)
chr7 (386-500)||(17203009-17203122)
chr7 (386-499)||(5530006-5530119)
chr7 (412-501)||(10648589-10648678)
chr7 (386-499)||(16306679-16306792)
chr7 (397-473)||(9916562-9916638)
chr7 (397-473)||(9924474-9924550)
chr7 (394-517)||(17077121-17077247)
chr7 (487-562)||(1584318-1584393)
chr7 (386-501)||(1872770-1872885)
chr7 (388-499)||(4579085-4579195)
chr7 (400-517)||(13418533-13418653)
chr7 (385-498)||(26134750-26134863)
chr7 (386-499)||(1882354-1882467)
chr7 (426-499)||(18467476-18467549)
chr7 (385-499)||(6005821-6005934)
chr7 (383-499)||(18465986-18466103)
chr7 (383-499)||(22339312-22339431)
chr7 (397-473)||(23093306-23093381)
chr7 (401-455)||(9890183-9890237)
chr7 (512-626)||(9131019-9131136)
chr7 (543-623)||(13418663-13418744)
chr7 (397-453)||(5047434-5047489)
chr7 (401-457)||(18661590-18661646)
chr7 (394-499)||(21885157-21885258)
chr7 (421-500)||(8877441-8877520)
chr7 (426-500)||(16059021-16059096)
chr7 (519-601)||(16297732-16297815)
chr7 (386-455)||(21227162-21227233)
chr7 (426-476)||(13277528-13277578)
chr7 (397-455)||(15303666-15303723)
chr7 (397-451)||(33035469-33035522)
chr7 (544-593)||(8293948-8293997)
chr7 (544-633)||(17829712-17829801)
chr7 (394-499)||(21912481-21912586)
chr7 (543-611)||(22067128-22067197)
chr7 (395-439)||(1814109-1814153)
chr7 (547-599)||(6006084-6006136)
chr7 (543-625)||(8877562-8877646)
chr7 (543-575)||(11221090-11221122)
chr7 (397-473)||(12391181-12391257)
[»] chr6 (57 HSPs)
chr6 (394-645)||(12183185-12183437)
chr6 (386-631)||(22567825-22568069)
chr6 (394-633)||(8241270-8241505)
chr6 (385-632)||(21907416-21907666)
chr6 (426-629)||(9838381-9838584)
chr6 (386-626)||(28933534-28933774)
chr6 (394-629)||(15466363-15466597)
chr6 (386-578)||(11176935-11177127)
chr6 (393-598)||(4339727-4339932)
chr6 (394-636)||(27737552-27737795)
chr6 (417-636)||(6630554-6630773)
chr6 (386-499)||(9726007-9726120)
chr6 (394-599)||(21672335-21672541)
chr6 (388-577)||(21688718-21688907)
chr6 (406-623)||(23645644-23645861)
chr6 (402-517)||(9516786-9516904)
chr6 (394-599)||(21679751-21679957)
chr6 (385-621)||(25927184-25927418)
chr6 (394-566)||(23143715-23143886)
chr6 (403-517)||(23844445-23844562)
chr6 (385-599)||(19244569-19244772)
chr6 (403-625)||(27124369-27124589)
chr6 (394-493)||(17729145-17729244)
chr6 (386-636)||(17826959-17827206)
chr6 (394-532)||(18075357-18075494)
chr6 (386-498)||(7542962-7543074)
chr6 (388-599)||(8039037-8039243)
chr6 (412-499)||(17299832-17299919)
chr6 (417-515)||(22410311-22410410)
chr6 (416-500)||(23231983-23232067)
chr6 (402-476)||(20005903-20005977)
chr6 (396-500)||(5624635-5624740)
chr6 (418-499)||(22566163-22566244)
chr6 (396-453)||(14079491-14079548)
chr6 (386-598)||(9898863-9899073)
chr6 (397-452)||(21932100-21932155)
chr6 (397-499)||(28586031-28586133)
chr6 (387-472)||(17382131-17382216)
chr6 (394-454)||(20145106-20145166)
chr6 (394-454)||(22187673-22187733)
chr6 (397-473)||(28589457-28589533)
chr6 (396-491)||(2586716-2586810)
chr6 (543-630)||(24215618-24215705)
chr6 (385-496)||(24251500-24251611)
chr6 (402-500)||(25781796-25781889)
chr6 (543-625)||(25781919-25782002)
chr6 (412-471)||(31629142-31629201)
chr6 (394-496)||(17883789-17883890)
chr6 (426-500)||(22413049-22413123)
chr6 (442-500)||(24252229-24252287)
chr6 (544-625)||(24657343-24657425)
chr6 (427-473)||(26215414-26215459)
chr6 (385-442)||(20002440-20002497)
chr6 (543-599)||(22813621-22813678)
chr6 (386-466)||(34478509-34478589)
chr6 (580-636)||(14637048-14637104)
chr6 (397-468)||(20722209-20722278)
[»] scaffold0005 (1 HSPs)
scaffold0005 (386-636)||(168162-168412)
[»] scaffold0622 (1 HSPs)
scaffold0622 (395-633)||(722-960)
[»] chr3 (49 HSPs)
chr3 (386-624)||(12805766-12806004)
chr3 (394-626)||(21303228-21303460)
chr3 (394-636)||(16245593-16245835)
chr3 (395-599)||(21325334-21325539)
chr3 (394-636)||(41508360-41508602)
chr3 (396-630)||(10744897-10745130)
chr3 (395-636)||(2167481-2167721)
chr3 (386-626)||(8319025-8319270)
chr3 (396-598)||(3116321-3116522)
chr3 (396-617)||(18736555-18736775)
chr3 (394-500)||(21301911-21302017)
chr3 (386-499)||(10917903-10918016)
chr3 (380-567)||(20429689-20429876)
chr3 (386-512)||(5508321-5508446)
chr3 (395-626)||(21825743-21825973)
chr3 (400-625)||(4650231-4650450)
chr3 (403-642)||(17438287-17438527)
chr3 (386-499)||(6289888-6290001)
chr3 (395-499)||(821515-821619)
chr3 (402-500)||(22349410-22349508)
chr3 (394-517)||(19171814-19171940)
chr3 (386-500)||(12411136-12411250)
chr3 (386-480)||(13908246-13908339)
chr3 (426-499)||(8557130-8557203)
chr3 (386-499)||(31286017-31286128)
chr3 (489-625)||(17155880-17156015)
chr3 (426-616)||(19925505-19925697)
chr3 (542-625)||(12754797-12754882)
chr3 (397-473)||(12759383-12759459)
chr3 (489-623)||(2723712-2723846)
chr3 (543-625)||(8770149-8770232)
chr3 (397-495)||(28728940-28729038)
chr3 (426-630)||(8445848-8446050)
chr3 (393-457)||(18458467-18458531)
chr3 (386-473)||(7147973-7148059)
chr3 (543-625)||(8765247-8765330)
chr3 (386-457)||(11518004-11518075)
chr3 (401-500)||(19908307-19908406)
chr3 (394-471)||(20397540-20397616)
chr3 (395-499)||(8143609-8143711)
chr3 (400-496)||(8770019-8770114)
chr3 (404-492)||(10923150-10923238)
chr3 (547-626)||(8143760-8143838)
chr3 (413-496)||(8765129-8765212)
chr3 (543-625)||(20023427-20023510)
chr3 (394-500)||(7478335-7478436)
chr3 (426-500)||(8889152-8889226)
chr3 (400-601)||(932742-932943)
chr3 (403-467)||(27542948-27543011)
[»] chr8 (42 HSPs)
chr8 (394-601)||(14528142-14528349)
chr8 (386-630)||(34497100-34497345)
chr8 (386-627)||(19786716-19786958)
chr8 (386-626)||(25182301-25182542)
chr8 (385-633)||(13697846-13698086)
chr8 (386-622)||(30806379-30806611)
chr8 (394-636)||(24114146-24114388)
chr8 (394-636)||(13314856-13315097)
chr8 (393-500)||(29382361-29382468)
chr8 (384-505)||(6884941-6885061)
chr8 (412-502)||(2637609-2637699)
chr8 (386-498)||(15238784-15238896)
chr8 (386-499)||(5850926-5851039)
chr8 (384-483)||(17101910-17102009)
chr8 (398-499)||(24904630-24904731)
chr8 (543-633)||(7983723-7983813)
chr8 (386-499)||(14075578-14075692)
chr8 (395-626)||(24269592-24269822)
chr8 (385-443)||(30235361-30235419)
chr8 (394-499)||(17976612-17976717)
chr8 (403-517)||(18448522-18448639)
chr8 (385-499)||(5052923-5053036)
chr8 (386-508)||(28276750-28276871)
chr8 (413-517)||(17509258-17509365)
chr8 (394-499)||(30122156-30122260)
chr8 (572-636)||(26394562-26394626)
chr8 (426-517)||(27659470-27659564)
chr8 (406-469)||(30783772-30783835)
chr8 (383-473)||(31288339-31288429)
chr8 (397-499)||(26008019-26008121)
chr8 (407-476)||(44011048-44011116)
chr8 (402-500)||(25226137-25226235)
chr8 (386-537)||(21314610-21314757)
chr8 (543-625)||(16404042-16404125)
chr8 (394-457)||(24110698-24110761)
chr8 (402-473)||(26615269-26615339)
chr8 (543-633)||(30122020-30122111)
chr8 (386-499)||(24644823-24644935)
chr8 (546-636)||(18448404-18448496)
chr8 (543-624)||(23893089-23893171)
chr8 (397-471)||(24119798-24119871)
chr8 (396-456)||(14628371-14628431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (394-626)||(39577-39810)
[»] scaffold0008 (2 HSPs)
scaffold0008 (386-636)||(54845-55097)
scaffold0008 (385-532)||(48158-48305)
[»] chr1 (57 HSPs)
chr1 (396-623)||(22664201-22664429)
chr1 (386-633)||(33190662-33190909)
chr1 (396-633)||(24281272-24281507)
chr1 (400-636)||(12208600-12208838)
chr1 (385-636)||(9787742-9787994)
chr1 (386-505)||(23038007-23038125)
chr1 (415-633)||(24214558-24214770)
chr1 (386-633)||(12012680-12012914)
chr1 (390-567)||(147620-147795)
chr1 (396-564)||(51473812-51473978)
chr1 (393-636)||(13345200-13345443)
chr1 (386-512)||(15813143-15813268)
chr1 (412-633)||(28008116-28008338)
chr1 (400-627)||(15543839-15544066)
chr1 (385-626)||(17610129-17610371)
chr1 (474-633)||(15807886-15808046)
chr1 (385-499)||(3591654-3591768)
chr1 (394-515)||(17359155-17359277)
chr1 (386-499)||(17837502-17837615)
chr1 (392-636)||(9401500-9401742)
chr1 (386-517)||(29242504-29242638)
chr1 (491-633)||(18100880-18101022)
chr1 (415-625)||(21666483-21666693)
chr1 (400-517)||(25405610-25405730)
chr1 (395-505)||(26648966-26649075)
chr1 (379-563)||(21847612-21847795)
chr1 (394-500)||(21449082-21449188)
chr1 (386-517)||(14779550-14779684)
chr1 (386-625)||(22620247-22620487)
chr1 (386-500)||(18736240-18736354)
chr1 (404-528)||(16179010-16179137)
chr1 (386-624)||(16359856-16360094)
chr1 (386-498)||(27117720-27117832)
chr1 (388-499)||(24306307-24306417)
chr1 (386-500)||(16787726-16787840)
chr1 (396-625)||(32382883-32383102)
chr1 (393-636)||(31235911-31236157)
chr1 (394-499)||(24267783-24267888)
chr1 (400-500)||(21987982-21988082)
chr1 (394-508)||(15813516-15813631)
chr1 (394-512)||(44795362-44795480)
chr1 (397-499)||(26540892-26540993)
chr1 (569-633)||(25961032-25961095)
chr1 (571-633)||(15813409-15813471)
chr1 (412-517)||(21334699-21334807)
chr1 (396-449)||(34480964-34481017)
chr1 (400-500)||(16069551-16069650)
chr1 (546-633)||(17121367-17121454)
chr1 (413-496)||(22622902-22622985)
chr1 (427-499)||(24306957-24307028)
chr1 (426-500)||(16916933-16917008)
chr1 (544-621)||(16069440-16069518)
chr1 (543-624)||(18830611-18830693)
chr1 (397-471)||(25958105-25958178)
chr1 (400-457)||(18825655-18825711)
chr1 (545-625)||(22623034-22623115)
chr1 (543-622)||(29242648-29242728)
[»] chr5 (46 HSPs)
chr5 (386-629)||(18208121-18208362)
chr5 (382-633)||(22755502-22755755)
chr5 (385-626)||(19283730-19283970)
chr5 (412-636)||(24245407-24245632)
chr5 (403-629)||(34487640-34487862)
chr5 (393-633)||(15690770-15691008)
chr5 (386-567)||(18937733-18937913)
chr5 (394-611)||(17171443-17171659)
chr5 (386-633)||(24266824-24267068)
chr5 (386-633)||(24343455-24343699)
chr5 (386-499)||(24852173-24852286)
chr5 (400-500)||(19004226-19004326)
chr5 (395-515)||(25550487-25550609)
chr5 (394-483)||(15469929-15470018)
chr5 (396-636)||(25402199-25402441)
chr5 (402-622)||(36175135-36175354)
chr5 (400-518)||(20315408-20315529)
chr5 (402-621)||(17431884-17432103)
chr5 (462-626)||(24662051-24662214)
chr5 (413-500)||(39434474-39434561)
chr5 (386-518)||(15375861-15375997)
chr5 (400-629)||(34128636-34128864)
chr5 (400-500)||(24140442-24140541)
chr5 (397-499)||(17185459-17185561)
chr5 (397-499)||(23380258-23380360)
chr5 (396-601)||(26120860-26121063)
chr5 (421-500)||(23388838-23388917)
chr5 (385-483)||(24167601-24167699)
chr5 (394-498)||(19086181-19086285)
chr5 (429-499)||(23265182-23265252)
chr5 (395-499)||(24656854-24656958)
chr5 (386-457)||(26121367-26121437)
chr5 (397-471)||(15544047-15544120)
chr5 (426-500)||(17315100-17315174)
chr5 (394-500)||(19051542-19051647)
chr5 (543-632)||(24265342-24265432)
chr5 (543-632)||(24341973-24342063)
chr5 (401-471)||(28253281-28253350)
chr5 (426-500)||(28664799-28664873)
chr5 (396-440)||(20419951-20419995)
chr5 (543-636)||(20744532-20744627)
chr5 (386-445)||(20744866-20744925)
chr5 (543-625)||(28664903-28664986)
chr5 (385-439)||(17635268-17635322)
chr5 (427-499)||(23014611-23014682)
chr5 (394-438)||(24662212-24662256)
[»] scaffold0062 (1 HSPs)
scaffold0062 (426-636)||(43090-43301)
[»] scaffold0155 (1 HSPs)
scaffold0155 (396-636)||(35857-36099)
[»] scaffold0102 (1 HSPs)
scaffold0102 (413-601)||(35549-35738)
[»] scaffold0427 (1 HSPs)
scaffold0427 (437-633)||(2684-2881)
[»] scaffold0838 (1 HSPs)
scaffold0838 (402-629)||(2371-2596)
[»] scaffold0832 (1 HSPs)
scaffold0832 (402-629)||(2402-2627)
[»] scaffold0043 (1 HSPs)
scaffold0043 (386-633)||(89720-89967)
[»] scaffold0653 (1 HSPs)
scaffold0653 (384-499)||(4484-4599)
[»] scaffold0650 (1 HSPs)
scaffold0650 (396-499)||(6282-6385)
[»] scaffold0638 (1 HSPs)
scaffold0638 (403-599)||(722-919)
[»] scaffold0035 (1 HSPs)
scaffold0035 (399-500)||(69911-70012)
[»] scaffold0136 (1 HSPs)
scaffold0136 (386-471)||(15494-15579)
[»] scaffold0001 (2 HSPs)
scaffold0001 (385-476)||(81471-81561)
scaffold0001 (394-515)||(69075-69195)
[»] scaffold0016 (2 HSPs)
scaffold0016 (397-499)||(12105-12207)
scaffold0016 (421-500)||(3551-3630)
[»] scaffold0672 (1 HSPs)
scaffold0672 (386-483)||(1719-1816)
[»] scaffold0048 (1 HSPs)
scaffold0048 (396-499)||(78589-78692)
[»] scaffold0019 (2 HSPs)
scaffold0019 (385-499)||(11223-11338)
scaffold0019 (385-567)||(181639-181820)
[»] scaffold0002 (1 HSPs)
scaffold0002 (489-622)||(114573-114710)
[»] scaffold1869 (1 HSPs)
scaffold1869 (401-517)||(369-488)
[»] scaffold0957 (1 HSPs)
scaffold0957 (394-473)||(3146-3224)
[»] scaffold0090 (1 HSPs)
scaffold0090 (396-483)||(7429-7516)
[»] scaffold0238 (1 HSPs)
scaffold0238 (394-499)||(19104-19208)
[»] scaffold0128 (1 HSPs)
scaffold0128 (384-445)||(37413-37474)
[»] scaffold0006 (2 HSPs)
scaffold0006 (387-494)||(18750-18858)
scaffold0006 (387-496)||(223033-223143)
[»] scaffold0671 (1 HSPs)
scaffold0671 (543-625)||(572-655)
[»] scaffold0042 (1 HSPs)
scaffold0042 (403-470)||(29909-29975)
[»] scaffold0351 (1 HSPs)
scaffold0351 (462-622)||(151-315)
[»] scaffold0056 (3 HSPs)
scaffold0056 (385-476)||(21259-21351)
scaffold0056 (543-625)||(25116-25199)
scaffold0056 (543-624)||(21406-21488)
[»] scaffold0063 (1 HSPs)
scaffold0063 (394-440)||(51116-51162)
[»] scaffold0054 (1 HSPs)
scaffold0054 (394-454)||(72065-72125)


Alignment Details
Target: chr2 (Bit Score: 390; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 18 - 633
Target Start/End: Original strand, 32085077 - 32085695
Alignment:
Q  18 atctaggacaggagatctctagttaatatgagcgatttcgcattctttcgtctttcttggctgagagtgtgaagtttttgttgttagtcgaacaactatg 117  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||||   ||||    
T  32085077 atctaggataggagatctctagttaatatgagcatattcgcattctttcatctttcttgactgagagtgtgaagtttt-gttgtttgtcgaac---tatg 32085172  T
Q  118 gctgattt-gaatgtgggagggcttttattggaggcaaaagatgaagaaggtctaagtttcattgttggagaagtagagttgggacagcatgcgatgagt 216  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  32085173 gctgattttggatgtgggagggctttcattggaggcaaaagatgaagaaggtctaagtttcattgttggagaagtagagttgggccaacatgcgatgagt 32085272  T
Q  217 ttttgtcttatcgacggtttattaacggt------atatgtttcaacgcaatgaaggtacaaatagtggagcattggaggtcaatgaaaggggtggaaat 310  Q
    |||||||||||||| ||||| |||||| |      ||||||||||||||||||||||||||| ||||||||  || |||| ||||||||||||||| |||    
T  32085273 ttttgtcttatcgatggtttcttaacgatcatctgatatgtttcaacgcaatgaaggtacaattagtggaggtttagaggccaatgaaaggggtggcaat 32085372  T
Q  311 caaggaaatgtcatcatagctctacctctttcaataatttcatgctttggacatggaaatggttctataggagggtgatggttggattaggcaagtgtac 410  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  32085373 caaggaaatgtcatcatagctgtgcctcttccaataatttcatgctttggacatggaaatggttctagaggaggatgatggtcggattaggtaagtgtac 32085472  T
Q  411 taaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacga 510  Q
     |||| |||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  32085473 caaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttacttattttaagttgacga 32085572  T
Q  511 tataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttagg 610  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||  ||||||||||||||| |||||||||||||||| | ||||||    
T  32085573 tataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagttacctggtttggttgcagaaaagtaagcagcggttagg 32085672  T
Q  611 actctttgaatccccctatttat 633  Q
    ||||||| |||||||||||||||    
T  32085673 actctttaaatccccctatttat 32085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 25618550 - 25618791
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||||||| |||  |||||||| |||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||| ||    
T  25618550 ggattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaac 25618648  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatag-ttacctggtttggctgcaga 591  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||||||| | |||||||||| ||||||||||||||| || ||||||| ||||| ||||||    
T  25618649 ttatttttagttgacgatat--aataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctgttttggttgcaga 25618746  T
Q  592 aaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||| | ||| | | |||| ||||||||| |||||||||    
T  25618747 aaagtaagcagcggttcgaattcttcgaatccccccatttatatt 25618791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 395 - 631
Target Start/End: Complemental strand, 20174740 - 20174505
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||| | |||| |||||||||||||||||| |||||| ||  ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttact 20174641  T
Q  495 tattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaa 594  Q
    ||||||||||||| |||||||||||||| ||||||  |||||||||   ||||||||| ||||||||||||||  | |||||| ||||||    ||||||    
T  20174640 tattttaagttgatgatataaaataaaatagttaagggttagagattggaatttttatctgtttgcaacagagcaaattacct-gtttggtaaaagaaaa 20174542  T
Q  595 gtaagcaacagttaggactctttgaatccccctattt 631  Q
    ||||||| | ||||| |||||| ||||||| ||||||    
T  20174541 gtaagcagcggttagcactcttcgaatccctctattt 20174505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 394 - 633
Target Start/End: Complemental strand, 29719337 - 29719097
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||  |||||| |||||||||    
T  29719337 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttac 29719238  T
Q  494 ttattttaag-ttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgca 589  Q
    ||||||| || |||||| |||  ||||||| |  |||  |||||||| |  |||||||||| ||| ||||||||||  || ||||||| |||||| ||||    
T  29719237 ttatttttagtttgacggtat--aataaaata--taagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgca 29719142  T
Q  590 gaaaagtaagcaacagttaggactctttgaatcccc-ctatttat 633  Q
    |||||||||||| ||||||||| |||| |||||||| ||||||||    
T  29719141 gaaaagtaagcagcagttaggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 386 - 633
Target Start/End: Original strand, 29027481 - 29027729
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||| ||   ||| |||||||||||||  |||||||||||| || ||| ||| |||| || ||| ||||| |||| ||  ||| || |    
T  29027481 tgatggttggattaggaaatgatacaaaatcgtttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatt 29027580  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
     |||||||||||||||||||| |||||| ||||||||||| |||  |||||||||  |||||||||| ||||||||| ||||  ||| ||||| |||||     
T  29027581 tgcgttacttattttaagttgccgatattaaataaaagagataagggttagagattgcaatttttatctgtttgcaagagagcaagtgacctgatttggt 29027680  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatcc-ccctatttat 633  Q
    |||||||||| || |||| ||||| ||| | ||||||| ||||||||||    
T  29027681 tgcagaaaagaaaacaacggttagaactatgtgaatccaccctatttat 29027729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 15339231 - 15339475
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||| ||||||| |||| |||||| |||||||||||||||||| |||||| | |||||||    
T  15339231 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttac 15339330  T
Q  494 tta--ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgc 588  Q
    |||  || |||||| | |||||  |||||||||  |||  |||||||| |  |||||||||||||||||||||||||  || ||| |||  ||| | |||    
T  15339331 ttactttgtaagttaaggatat--aataaaaga--taagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttgc 15339426  T
Q  589 agaaaagtaagcaacagttaggactctttgaatcccc-ctatttatatt 636  Q
    ||||||||||||| ||||||||| ||||  ||||||| |||||||||||    
T  15339427 agaaaagtaagcagcagttaggattcttcaaatcccctctatttatatt 15339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 626
Target Start/End: Complemental strand, 25885563 - 25885335
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||| | ||||| ||||||||||| | ||||||| |||||||| | | ||||||||||| | | |||||||||||||| |||||| | | |||||||    
T  25885563 attaggcgattgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttactt 25885465  T
Q  496 attttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaag 595  Q
    ||||||    ||||||||||||||||||||||||  |||||| || ||||||||||| |||| | || |||||  ||||||||| |||| || |||||||    
T  25885464 attttattccgacgatataaaataaaagagttaagggttagatatttcaatttttatctgttcggaatagagaaggttacctgg-ttggttgtagaaaag 25885366  T
Q  596 taagcaacagttaggactctttgaatccccc 626  Q
    ||||||   ||||||||||||||||| ||||    
T  25885365 taagcagtggttaggactctttgaattcccc 25885335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 439 - 636
Target Start/End: Complemental strand, 28606239 - 28606041
Alignment:
Q  439 aagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagag 538  Q
    ||||||| |||||||||||   |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||  ||  |||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattttaagttgacgatatataataaaagagacaagggttagag 28606140  T
Q  539 atatcaatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||  |||||||||||||||| | ||| |   |||||||||  ||| | |||| ||||| || |||| ||||||| ||||| |||||||| |||||||||    
T  28606139 attgcaatttttatttgtttacgacataacaagttacctgttttttgttgcataaaaggaaacaactgttaggaatctttaaatccccccatttatatt 28606041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 17743590 - 17743476
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||| |    
T  17743590 tgatggtcggatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaatt 17743491  T
Q  486 cgcgttacttatttt 500  Q
    || ||||||||||||    
T  17743490 cgtgttacttatttt 17743476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 25888326 - 25888216
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||    |||||| |||||||||    
T  25888326 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgtttc----aaacaattcgcgttac 25888231  T
Q  494 ttattttaagttgac 508  Q
    |||||||||||||||    
T  25888230 ttattttaagttgac 25888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 636
Target Start/End: Complemental strand, 27909219 - 27908981
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||| || | ||||| || |||||| || ||||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T
Q  500 ---taag-ttgacgatataaaa--taaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaa 592  Q
       |||| ||||||||||||||  |||||| |||| ||  | |      |||||||||| ||||||||||||||  || ||||||| ||||| |||||||    
T  27909119 ttgtaagtttgacgatataaaagttaaaagggttagaacgttg------caatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaa 27909026  T
Q  593 aagtaagcaacagttaggactctttgaat-ccccctatttatatt 636  Q
    || |||||| | ||||||| |||| |||| |||||||||||||||    
T  27909025 aattaagcagcggttaggattcttcgaatcccccctatttatatt 27908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 567
Target Start/End: Complemental strand, 11382869 - 11382686
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||||  |||||||  ||||||||  |||||||||||||  ||||||||||||||||||| |||| |||||| ||| |||||  |||| || ||| ||    
T  11382869 ggtgatgtgtggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataa 11382770  T
Q  484 ctcgcgttacttattttaag-ttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagag 567  Q
     |||||||||||||||| || ||||||  |||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||    
T  11382769 ttcgcgttacttatttttagtttgacg--ataagataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagag 11382686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 515
Target Start/End: Original strand, 17349352 - 17349472
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |  ||||||||||||||| |||||  ||||||||||    
T  17349352 gattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttact 17349449  T
Q  495 tattt--taagttgacgatataa 515  Q
    |||||  ||||||||||||||||    
T  17349450 tattttgtaagttgacgatataa 17349472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 8447152 - 8447051
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||| |  ||| |||||||||||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgttccaactagacaactcgcgttactta 8447054  T
Q  497 ttt 499  Q
    |||    
T  8447053 ttt 8447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 45621995 - 45621881
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||| | |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| | | |||||||||||||||| |||||| |    
T  45621995 tgatggtcggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaatt 45621896  T
Q  486 cgcgttacttatttt 500  Q
    || ||||||||||||    
T  45621895 cgtgttacttatttt 45621881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 500
Target Start/End: Complemental strand, 12953399 - 12953294
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| ||||| |||| || |||||||||| ||||||||| ||| || |||| |||||||||||||||||| |||||| ||||||||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttact 12953300  T
Q  495 tatttt 500  Q
    ||||||    
T  12953299 tatttt 12953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 386 - 630
Target Start/End: Original strand, 45553115 - 45553357
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||| |||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||  | | |||||||||||| ||| || ||| |    
T  45553115 tgatggttagattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaatt 45553214  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaag-ttagagatat-caatttttatttgtttgcaacagagatagttacctggtttg 583  Q
    || |||| ||||||   |   || | |||| ||||||||| | |  | |||||||| | |||||||||| ||||||||||| ||  ||||||||| ||||    
T  45553215 cgtgttaattattt---gagaacaaaataatataaaagagctgacggtttagagatttgcaatttttatctgtttgcaacatagcaagttacctgttttg 45553311  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
    | ||||| || || |||| | ||||||| ||||||||||||||||||    
T  45553312 gttgcag-aacgttagcagcggttaggattctttgaatccccctatt 45553357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 385 - 567
Target Start/End: Original strand, 13776323 - 13776503
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| | ||||| ||||||||  ||||||||||  |  |||||||||||||||| || ||||||||||| || ||||||| ||||||| |||||||    
T  13776323 gtgatggtcgaattagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaac 13776421  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagtt-agagatat-caatttttatttgtttgcaacagag 567  Q
     | ||||||||||||||||||||||  ||||||| |||||| |||  ||| |||||| | |||||||||| ||||||||||||||    
T  13776422 ccacgttacttattttaagttgacg--ataaaat-aaagagataagggttaagagatttgcaatttttatctgtttgcaacagag 13776503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 19200249 - 19200130
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| || |||||||||||||| ||||| |||||||  |||||| ||||||||| || ||||||||||| | ||||||||||||| || |||||||    
T  19200249 gtgatggtcgggttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaac 19200151  T
Q  485 tcgcgttacttattttaagtt 505  Q
    || | ||||||||||||||||    
T  19200150 tcacattacttattttaagtt 19200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 386 - 625
Target Start/End: Original strand, 28925507 - 28925746
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  |||||||||||||||||||| |||| ||||||||||||||||||||   | |||||||  ||||||||||||||||| |||||| |    
T  28925507 tgatggtcggatatggcaagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaatt 28925605  T
Q  486 cgcgttacttattt---taag-ttgacgatataaaata-aaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctgg 579  Q
    |  |||| ||||||   |||| |||||||||||||| | |||| |||| ||     || |  |||||||||||||||||||||| ||  || |||||||     
T  28925606 catgttatttatttttgtaagtttgacgatataaaagataaagggttagaa-----agcttgcaatttttatttgtttgcaacatagcaagtttacctgt 28925700  T
Q  580 tttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    ||||| ||||||||||||||||   ||||||| |||| ||||||||    
T  28925701 tttggttgcagaaaagtaagcagaggttaggattcttcgaatcccc 28925746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 30411679 - 30411777
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| | | |||||||| |||||||  ||||| | ||||||||||||||    
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttatttt 30411777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 626
Target Start/End: Complemental strand, 23011874 - 23011637
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| ||| ||||||||||||| ||||  ||||||| ||||||||||| |||||||| ||| ||||||| | |||||||||||| |||||||||| | |    
T  23011874 atggtcggaataggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttg 23011776  T
Q  488 cgttacttattttaagttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggct 586  Q
    ||||| ||||||    | |||||||||| ||||||||||||||  |||||| ||   ||||||||| | ||| ||||| |   ||||||||  ||||| |    
T  23011775 cgttatttatttagtctagacgatataataataaaagagttaagggttagatattgaaatttttatctatttccaacatatcaagttacct-atttggtt 23011677  T
Q  587 gcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    | |||||||||| || | |||| |||||||  ||||||||    
T  23011676 gtagaaaagtaaccagcggttaagactcttcaaatccccc 23011637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 26603456 - 26603350
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||| ||||| || |||| ||||||||||||||| ||||||||  |||||||||||| ||||||  |||||| |  ||||||    
T  26603456 ggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttac 26603357  T
Q  494 ttatttt 500  Q
    |||||||    
T  26603356 ttatttt 26603350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 25196010 - 25196127
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatt- 498  Q
    ||||||||||| || |||||||||| |||||||||||||||||||| |||| |||||| | || ||||| ||||||| |||||| || |||||||||||     
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattt 25196108  T
Q  499 ---ttaagttgacgatata 514  Q
       ||||||||||||||||    
T  25196109 ttattaagttgacgatata 25196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 543 - 630
Target Start/End: Complemental strand, 23933502 - 23933415
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
    |||||||||| ||||||||||||||  |||||| |||||||| | || ||||||||||| | ||||||| ||||||||||||||||||    
T  23933502 caatttttatctgtttgcaacagagcaagttacttggtttggtttcacaaaagtaagcagcggttaggattctttgaatccccctatt 23933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 8503173 - 8503071
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||||  ||| |||||| |||||||||| ||||  | |||||| | |||||||| |    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaa 8503074  T
Q  497 ttt 499  Q
    |||    
T  8503073 ttt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 24091000 - 24090926
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||| ||  ||||||||||||    
T  24091000 gtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttt 24090926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 385 - 517
Target Start/End: Complemental strand, 17635890 - 17635755
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||  ||||| ||||  ||||||||||||| ||||||||| || |||||||  ||| |||||| |  ||||||||||||||| ||| |||    
T  17635890 gtgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaac 17635791  T
Q  485 tcgcgttacttattt---taagttgacgatataaaa 517  Q
    || ||||||||||||   |||||||||||| |||||    
T  17635790 tcacgttacttatttttgtaagttgacgatgtaaaa 17635755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 5777200 - 5777314
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||||||  |||||||||||||||  | |||||||| ||  |||||||||  |||||| | ||||| ||| |||||||||||||||||||| ||||||    
T  5777200 ggtgatggtcagattaggcaagtgtatcatatcgtttatcaaataataaagtt-taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaa 5777298  T
Q  484 ctcgcgttacttattt 499  Q
     || ||||||||||||    
T  5777299 ttcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 601
Target Start/End: Complemental strand, 31805004 - 31804797
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    |||||| |||||||| |||| ||||||||  ||||||||||||||||||| ||| ||||||| |  ||||| ||||||||| || |||   | |||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttactt 31804905  T
Q  496 attt---taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagag-atagttacctg-gtttggctgca 589  Q
    ||||   ||||||||||||||  |||||||||  |||  |||||||| |  |||||||||||||||||||| | || | | |||||||  ||||| ||||    
T  31804904 atttttgtaagttgacgatat--aataaaaga--taagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgca 31804809  T
Q  590 gaaaagtaagca 601  Q
    ||||||||||||    
T  31804808 gaaaagtaagca 31804797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 473
Target Start/End: Complemental strand, 12557825 - 12557736
Alignment:
Q  384 ggtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||| ||||||||||| |||||||||||||| ||||| | |||||| ||||||    
T  12557825 ggtgatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgtttc 12557736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 496
Target Start/End: Complemental strand, 30900958 - 30900848
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||   |||| |||| ||||||||  |||||||||||||| |||| ||| |||||||  |  ||||| ||||||||||||||| |    
T  30900958 tgatggtcggattaggcataggtaccaaattgtttaccaaataataaagtgataactagagtattgtatccacgtatattgttgtttcgtctaaacaatt 30900859  T
Q  486 cgcgttactta 496  Q
    |||||||||||    
T  30900858 cgcgttactta 30900848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 28770548 - 28770444
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||| ||| |||||| ||||| |||||||  ||||||||||||||||||| ||||||||||||| | | |||| |||| || |||||| || || ||||    
T  28770548 gattaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctact 28770449  T
Q  495 tattt 499  Q
    |||||    
T  28770448 tattt 28770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 543 - 626
Target Start/End: Original strand, 17890079 - 17890162
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    |||||||||| ||||||||||||||  ||||||||| ||||| |||||||| |||||||||  ||| || ||||| ||||||||    
T  17890079 caatttttatatgtttgcaacagagcaagttacctgttttggttgcagaaatgtaagcaacgattaagattctttcaatccccc 17890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 25535299 - 25535373
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| ||||||||||| | |||||||| |||||||  ||||| ||  ||||||||||||    
T  25535299 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttt 25535373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 636
Target Start/End: Complemental strand, 26603317 - 26603223
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggttt-ggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||| ||||||||||||||    ||||||| ||| || || ||||||||||||| | ||||||| |||| |||||||||||||||||||    
T  26603317 caatttttatctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatccccctatttatatt 26603223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 9774414 - 9774325
Alignment:
Q  419 ttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacga 510  Q
    |||||| | |||||||||||  ||||| ||||||||||| |||||||||||||| ||| || ||| | |||||||||||||| |||| ||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttatttttagttaacga 9774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 594
Target Start/End: Complemental strand, 17675745 - 17675534
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc-taaacaa 483  Q
    |||||||| ||||  ||||| ||||  ||||||||||||| ||||||||| || |||||||  ||| |||| | |  |||||||||||||||  ||| ||    
T  17675745 gtgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaa 17675646  T
Q  484 ctcgcgttacttattt---taagttgacgatataaa--ataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacct 577  Q
    ||| ||||||||||||   |||||||||||| ||||  ||||||| |||| ||     || |  |||||||||| ||||||||||||||  || ||||||    
T  17675645 ctcacgttacttatttttgtaagttgacgatgtaaaagataaaagggttagaa-----aggttgcaatttttatctgtttgcaacagagcaagtttacct 17675551  T
Q  578 ggtttggctgcagaaaa 594  Q
    | ||||| |||||||||    
T  17675550 gttttggttgcagaaaa 17675534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 25530472 - 25530522
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    |||||||||||||||||||| ||||||||||| | |||||||| |||||||    
T  25530472 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtc 25530522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 500
Target Start/End: Original strand, 25920303 - 25920365
Alignment:
Q  438 taagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||| ||||||||||| |||||||||| |||||||  ||||| || |||||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttt 25920365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 27418391 - 27418465
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| |||| |||||| ||||||| || ||||  | |||||| ||| ||||||||||||    
T  27418391 gtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 5792812 - 5792926
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||||||  |||||||||||||| | ||||||||||  | ||||||| ||| ||||||   ||||||||| | ||||||| || ||||||| |||| |    
T  5792812 ggtgatggtcagattaggcaagtgtgccaaatcgtttattaagtaataacgtg-taagtatggtatcgtatctacatggattatcatttcgtccaaacca 5792910  T
Q  484 ctcgcgttacttattt 499  Q
     || ||||||||||||    
T  5792911 ttcacgttacttattt 5792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 29142973 - 29143060
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||| | || ||||||||  |||||||||| || |||||||| ||||||||||  |||||   ||||| ||||||||||||||||    
T  29142973 aatcgttaatcaagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttt 29143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 636
Target Start/End: Original strand, 25530577 - 25530671
Alignment:
Q  543 caatttttatttgtttgcaacagag-atagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||| ||||||||||||||   | ||||||| ||||| |||| || |||||||| | ||||||| |||| |||||||||| | ||||||    
T  25530577 caatttttatctgtttgcaacagagcgaatttacctgttttggttgcaaaatagtaagcagcggttaggattcttcgaatccccctctgtatatt 25530671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 17889921 - 17890009
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcg 474  Q
    |||||||| ||||||  ||||||||| ||||||||||| |  ||||| |||| |||||||  |||| ||| |||| ||||||||||||||    
T  17889921 gtgatggtcggattatacaagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcg 17890009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 598
Target Start/End: Complemental strand, 25887893 - 25887805
Alignment:
Q  513 taaaataaaagagttaaaag-ttagagatat-caatttttatttgtttgcaacagagatagttacct-ggtttggctgcagaaaagtaa 598  Q
    |||| ||||||||||||| | |||||||| | |||||||||| ||||||||||||||  ||||||||   ||||| |||||||||||||    
T  25887893 taaagtaaaagagttaaagggttagagatttgcaatttttatctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaa 25887805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 394 - 611
Target Start/End: Original strand, 17671995 - 17672212
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  17671995 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttac 17672094  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||  ||||||||||||||| ||||||||    
T  17672095 ttattttaagttaacgatataaaataaaagagttaaaggttagagattgcaatttttatctgtttgcaacagagcaagttacctggtttggttgcagaaa 17672194  T
Q  594 agtaagcaacagttagga 611  Q
    |||||| | |||||||||    
T  17672195 agtaagaagcagttagga 17672212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 386 - 636
Target Start/End: Original strand, 14648880 - 14649130
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||| |||||| | ||    
T  14648880 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagct 14648978  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
    || ||||||||||||||||||||||||||||||||||||  |||  ||||||||| ||||||||||| ||||||||||||||  |||||| ||  |||||    
T  14648979 cgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttttgg 14649078  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
     || ||||||| || |||| ||||||||||||||||||||||| ||||||||    
T  14649079 ttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 14649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 386 - 601
Target Start/End: Complemental strand, 17951410 - 17951195
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggatt-gtcgtttcgtctaaacaac 484  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||  | |    
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccat-tggatttgtcgtttcgtctaactagc 17951312  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    |||||||||||||||||||||||||||||||||||||||||| |   |||||||||  |||||||||| ||||||||||||||  ||||||||| |||||    
T  17951311 tcgcgttacttattttaagttgacgatataaaataaaagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaagttacctgatttgg 17951212  T
Q  585 ctgcagaaaagtaagca 601  Q
     |||||||||| |||||    
T  17951211 ttgcagaaaagcaagca 17951195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 386 - 601
Target Start/End: Complemental strand, 17955262 - 17955047
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggatt-gtcgtttcgtctaaacaac 484  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||  | |    
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccat-tggatttgtcgtttcgtctaactagc 17955164  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    |||||||||||||||||||||||||||||||||||||||||| |   |||||||||  |||||||||| ||||||||||||||  ||||||||| |||||    
T  17955163 tcgcgttacttattttaagttgacgatataaaataaaagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaagttacctgatttgg 17955064  T
Q  585 ctgcagaaaagtaagca 601  Q
     |||||||||| |||||    
T  17955063 ttgcagaaaagcaagca 17955047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 386 - 626
Target Start/End: Original strand, 19092280 - 19092520
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| |||| ||||| || |||||||||||||||| ||| ||||| || || |||||||||||||||||| ||||||||    
T  19092280 tgatggtcagattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaact 19092379  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    | |||| ||||||||||||||||||||| ||||||||||| ||| ||||||||||  |||||||||| ||||| ||||||||  | ||||||| |||||     
T  19092380 cacgttgcttattttaagttgacgatattaaataaaagagataagagttagagattgcaatttttatctgtttacaacagagtaaattacctgttttggt 19092479  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    | |||||||||||  | | |||||||||||||| |||||||    
T  19092480 tacagaaaagtaaatagcggttaggactctttgcatccccc 19092520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 398 - 626
Target Start/End: Complemental strand, 19929777 - 19929548
Alignment:
Q  398 taggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttat 497  Q
    ||||||||||||| ||||| ||||||| |||| |||||||||| |||| ||||||||||| |||||||||||||||||||||| | | || |||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttat 19929678  T
Q  498 tttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaaagt 596  Q
    ||||||||||| |||||||||||||||| |||  |||| |||| ||||||||||| ||||||||||||||  | |||| ||  ||||| ||||||||||     
T  19929677 tttaagttgacaatataaaataaaagagataagggttaaagatttcaatttttatctgtttgcaacagagcaaattacatgtttttggttgcagaaaagg 19929578  T
Q  597 aagcaacagttaggactctttgaatccccc 626  Q
    || |||||||||||||||||| ||| ||||    
T  19929577 aaacaacagttaggactctttaaattcccc 19929548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 394 - 590
Target Start/End: Complemental strand, 12578372 - 12578176
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||| |||||||  |||||||||||||| |||| ||||||||||| |||||||||||||| ||| |||||| | ||||| |    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttc 12578273  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||  |||||||||| ||||||||||||||  ||||||||| ||||| |||||    
T  12578272 ttattttaagttgacgatataaaataaaagagtaaagggttagagattacaatttttatctgtttgcaacagagcaagttacctgttttggttgcag 12578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 382 - 633
Target Start/End: Original strand, 5679186 - 5679438
Alignment:
Q  382 agggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaac 481  Q
    |||||||||||   ||||| ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| | ||| | | | |||||||| ||||    
T  5679186 agggtgatggtccaattagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaac 5679285  T
Q  482 aactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtt 581  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||  |||||| ||  |||||||||| |||||| |||||||  ||||||||  ||    
T  5679286 aattcgcgttacttattttaagttaacgatataaaataaaagagttaagggttagacattgcaatttttatctgtttgtaacagagcaagttacct-att 5679384  T
Q  582 tggctgc-agaaaagtaagcaacagttaggactctttgaatcc-ccctatttat 633  Q
    ||| ||| | ||||||||||| |  |||||||||||||||||| ||||||||||    
T  5679385 tggttgcaaaaaaagtaagcagccattaggactctttgaatcctccctatttat 5679438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 386 - 626
Target Start/End: Complemental strand, 22357649 - 22357405
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagta---gaatatcgtatccatatggattgtcgtttcgtctaaaca 482  Q
    |||||||  ||||||| |||||||||||||| ||||||| ||||||||||||||||||    | ||||||||||| ||||||||||||||| | ||||||    
T  22357649 tgatggtcagattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaaca 22357550  T
Q  483 actcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtt 581  Q
      ||| ||||||||||| ||||||||||||||||| | ||||| ||| ||||||||||  |||||||||||||||||||| | ||  |||||| ||  ||    
T  22357549 gttcgtgttacttatttaaagttgacgatataaaaaataagagataagagttagagattgcaatttttatttgtttgcaatatagcaagttacttgtttt 22357450  T
Q  582 tggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    ||  |||||||||| ||||| |  |||||||| ||||||||||||    
T  22357449 tgattgcagaaaaggaagcatcgtttaggactttttgaatccccc 22357405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 11490518 - 11490694
Alignment:
Q  387 gatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactc 486  Q
    |||||| |||||||| |||||||| |||| ||||| || |||||||||||||||||||| ||||||||||| | ||||||| ||||| || |||||| ||    
T  11490518 gatggtcggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattc 11490617  T
Q  487 gcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaaca 564  Q
    |||||||||||||||  |||||||||||||||||||||||| |  |||||||||  |||||||||| ||||| |||||    
T  11490618 gcgttacttattttagtttgacgatataaaataaaagagtt-agtgttagagattgcaatttttatctgttttcaaca 11490694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 13128978 - 13128808
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttactt 13128879  T
Q  496 a--ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagag 567  Q
    |  |||| ||||||| ||||  |||||||||  |||  |||||||| |  ||||||||||||||||| |||||||    
T  13128878 atttttttagttgaccatat--aataaaaga--taagggttagagagttgcaatttttatttgtttggaacagag 13128808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 398 - 559
Target Start/End: Complemental strand, 22176064 - 22175904
Alignment:
Q  398 taggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttat 497  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||| ||| |||||||||  ||||||| |||  || |||||| ||||| || ||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taattat 22175966  T
Q  498 tttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttg 559  Q
    ||| |||||| |||||||||||||||||||||  |||||||||  |||||||||||||||||    
T  22175965 tttgagttgatgatataaaataaaagagttaagggttagagattgcaatttttatttgtttg 22175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 21323989 - 21323875
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||||| ||||||||||| || ||||||||||||||| |||||| |    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 21323890  T
Q  486 cgcgttacttatttt 500  Q
    |||||||||||||||    
T  21323889 cgcgttacttatttt 21323875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 19882625 - 19882738
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| |||||||||| || ||||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||| |    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaatt 19882724  T
Q  486 cgcgttacttattt 499  Q
    ||||||||||||||    
T  19882725 cgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 13692783 - 13692669
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||||||| | |||||| |    
T  13692783 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaatt 13692684  T
Q  486 cgcgttacttatttt 500  Q
    || ||||||||||||    
T  13692683 cgtgttacttatttt 13692669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 401 - 627
Target Start/End: Original strand, 13908854 - 13909081
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| ||| ||||||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt 13908953  T
Q  501 ----aagttgacgatataaaataaaagagtta-aaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgcagaaa 593  Q
        |  ||||||||||||||  |||| |||| |||||      |  |||||||||| ||||||||||||||  || |||||||  ||||| |||| |||    
T  13908954 tgtaattttgacgatataaaagtaaag-gttagaaagt-----cttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaa 13909047  T
Q  594 agtaagcaacagttaggactctttgaatccccct 627  Q
    |||||||| | ||||||| |||||||||||||||    
T  13909048 agtaagcagcggttaggattctttgaatccccct 13909081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 386 - 630
Target Start/End: Complemental strand, 25121339 - 25121096
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||| |||||| | ||||||||||||| ||||||||||| |||||| | ||||||||||| | ||||||| |||||||| |||||| |    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaatt 25121241  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaag-ttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    ||||||||||||||    || |  | || ||||||||||||| |  | | | ||||  |||||| ||| ||||||||||||||  ||||||| | ||||     
T  25121240 cgcgttacttatttggttttaaaaaaat-aaataaaagagttgagtgataatagattgcaatttctatctgtttgcaacagagcaagttacccgttttga 25121142  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
     |||||||||||||||| | ||||||| |||| |||||||||||||    
T  25121141 ttgcagaaaagtaagcagcggttaggattcttcgaatccccctatt 25121096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 485
Target Start/End: Original strand, 15047113 - 15047212
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||  |||||||| | ||||||| |||||||||||||||||||    
T  15047113 tgatggttggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaact 15047212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 386 - 485
Target Start/End: Complemental strand, 15107311 - 15107212
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||  |||||||| | ||||||| |||||||||||||||||||    
T  15107311 tgatggttggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaact 15107212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 20315000 - 20315098
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||| | |||||||||||||||| |||||| | |||||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 11933414 - 11933529
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||| |  |||||||||||| ||||| ||||||||||| || ||||||  ||| |||||||||||||||||| ||||||||||||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttactt 11933512  T
Q  496 attttaagttgacgata 512  Q
    ||||||| |||| ||||    
T  11933513 attttaatttgatgata 11933529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 492
Target Start/End: Complemental strand, 9737623 - 9737512
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgat-----aagtagaatatcgtatccatatggattgtcgtttcgtctaaa 480  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||     ||||||| ||||||||||| ||||||||| ||||||||||||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaa 9737524  T
Q  481 caactcgcgtta 492  Q
    ||| | ||||||    
T  9737523 caatttgcgtta 9737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 400 - 611
Target Start/End: Original strand, 17216816 - 17217030
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta--- 496  Q
    ||||| ||||| ||||||||||||| | |||||||||||||||||| |||| |||||| |||||||||||||||||| |||||| || |||||||||       
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatat 17216915  T
Q  497 ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaa 594  Q
    || |||||||| |||||  |||| ||||   ||  |||||| | |  |||||||||| ||||||||||||||  || |||| || ||||| || ||||||    
T  17216916 ttgtaagttgatgatat--aatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatgttttggttgtagaaaa 17217013  T
Q  595 gtaagcaacagttagga 611  Q
    ||||||||| |||||||    
T  17217014 gtaagcaacggttagga 17217030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 16730513 - 16730399
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  |||| ||||||||||||| |||| | | || ||||||||||||||| ||||||||||| | ||||| |||||||||| ||||||||    
T  16730513 tgatggtcggatatggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaact 16730414  T
Q  486 cgcgttacttatttt 500  Q
    |||||||||||||||    
T  16730413 cgcgttacttatttt 16730399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 402 - 500
Target Start/End: Complemental strand, 19492798 - 19492700
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||| | | ||||||||||| || |||||| ||||||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttt 19492700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 419 - 636
Target Start/End: Complemental strand, 24639535 - 24639324
Alignment:
Q  419 ttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaat 518  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||| |||||| ||| |||||| | |      | | ||| ||||||||||||||  |    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg------taacttttagttgacgatataa--t 24639444  T
Q  519 aaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagtt-acctggttt-ggctgcagaaaagtaagcaacagttaggactctt 616  Q
    |||| ||| ||  ||||||||| |  | |||||||||||||||||||||  |||| ||||| ||| || ||||||||||||||||   ||||||| ||||    
T  24639443 aaaatagtaaagggttagagatttgtaattttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctt 24639344  T
Q  617 tgaatccccctatttatatt 636  Q
    |||||||| |||||||||||    
T  24639343 tgaatccctctatttatatt 24639324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 402 - 599
Target Start/End: Original strand, 15164768 - 15164964
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt-- 499  Q
    ||||||||| ||||||||||||| ||||| || | ||||| ||| ||||||||||| | |||||||| ||||||| |||||| | |||||||||||||      
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattttt 15164867  T
Q  500 -taag-ttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaag 595  Q
     |||| |||||||||||||       ||||||  |||||||| |  |||||||||||||||||||||||||  || ||||||| ||||| ||||||||||    
T  15164868 gtaagtttgacgatataaa-------agttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctgttttggttgcagaaaag 15164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 426 - 567
Target Start/End: Complemental strand, 17337209 - 17337069
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagag 525  Q
    ||||||| |||||||||||| ||||||||||| |  ||||||| ||||||| |||||| | |||||||||||||| ||||||||||||  ||||||||||    
T  17337209 gtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgacgatat--aataaaagag 17337112  T
Q  526 ttaaaagttagagatat-caatttttatttgtttgcaacagag 567  Q
    | ||  ||| ||||| | |||||||||| ||||| ||||||||    
T  17337111 taaagggtttgagatttgcaatttttatctgtttacaacagag 17337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 40227770 - 40228011
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||||  ||||| ||||||||| | ||||| ||||| || |||||| |||||||||    
T  40227770 ggattaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagtt-aatattgtatccataggaattgtagtttcatccaaacaattcgcgttac 40227867  T
Q  494 ttattttaag-ttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatag-ttacct-ggtttggctgca 589  Q
    ||||||| || ||||||  |||| |||||||||| ||  | ||||| | | |||||||||| |||||||||| |||  || ||||||   ||| | |||     
T  40227868 ttatttttagtttgacg--ataatataaaagagtaaagggctagaggtttacaatttttatctgtttgcaacggagtaagtttacctattttttgttgcc 40227965  T
Q  590 gaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||| |||||| | ||||||| || |||||||||||||||||||||    
T  40227966 gaaaaataagcagcggttaggattc-ttgaatccccctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 625
Target Start/End: Original strand, 17709757 - 17709978
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt- 499  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||  ||| |||   |||| || ||||||||||||     
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttatttt 17709853  T
Q  500 --taagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagt 596  Q
      ||| |||||||||||||| | ||| |||||||   |||  |   ||||||||| ||||||||||||||  || ||||||| ||||| |||| ||||||    
T  17709854 tataatttgacgatataaaagataagggttaaaa---aga-cttgaaatttttatatgtttgcaacagagcaagtttacctgttttggttgcaaaaaagt 17709949  T
Q  597 aagcaacagttaggactctttgaatcccc 625  Q
    ||| | | ||||||| |||| ||||||||    
T  17709950 aagtagctgttaggattcttcgaatcccc 17709978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 23080326 - 23080439
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||  |||||||||||||  |||||||  |||||| |||||||||||||||| |||| || |||||||||||||||  | |||||| |    
T  23080326 tgatggttggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatt 23080425  T
Q  486 cgcgttacttattt 499  Q
     |||||||||||||    
T  23080426 tgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 13992982 - 13992879
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||| ||| |||||||| |||| |||||||| ||||||||||| |||||||| ||||||||||| ||||||| |||||| ||| |||||| ||| |||||    
T  13992982 ggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgttac 13992883  T
Q  494 ttat 497  Q
    ||||    
T  13992882 ttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 403 - 540
Target Start/End: Complemental strand, 19636682 - 19636547
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaa 502  Q
    |||||||| |||||||| || | ||||||||||| |||||||| ||| ||||| ||| ||||||||||||| || |||||| ||  ||||||||||||||    
T  19636682 aagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattttaa 19636584  T
Q  503 g-ttgacgatataaaataaaagagttaaaagttagagat 540  Q
    | ||||||  ||||||||||||||||||  |||||||||    
T  19636583 gtttgacg--ataaaataaaagagttaagggttagagat 19636547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 7582282 - 7582396
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  || |||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||| ||||||||| |||||||| ||||||      
T  7582282 tgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatc 7582381  T
Q  486 cgcgttacttatttt 500  Q
     || |||||||||||    
T  7582382 tgcattacttatttt 7582396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 499
Target Start/End: Complemental strand, 11521288 - 11521192
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||| |||||||||| ||  ||||||||||||||||||| |||||||| || ||||||||||||||| ||||||| | || | ||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttattt 11521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 20829853 - 20829734
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||| | || ||| ||||||| | ||||||| |||||||  ||| ||     
T  20829853 gtgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaat 20829755  T
Q  485 tcgcgttacttattttaagtt 505  Q
    | || ||||||||||||||||    
T  20829754 ttgcattacttattttaagtt 20829734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 402 - 630
Target Start/End: Complemental strand, 26116001 - 26115775
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||| |||||||||| || ||||||| ||| ||| || | ||||||||||||| ||||||||| ||| || |||||| |||  ||||||||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttatttta 26115903  T
Q  502 agttgacgatataaaataaaagagttaaaagtt-agagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaag 599  Q
    |    |  | |||| ||||||||||| |  ||| |||||| | |||||||||| ||||||||||||||  ||||||||| ||||| |||| ||| || ||    
T  26115902 a---aataaaataatataaaagagtttagggttaagagatttgcaatttttatctgtttgcaacagagtaagttacctgttttggttgcataaatgttag 26115806  T
Q  600 caacagttaggactctttgaatccccctatt 630  Q
    || | ||||||| ||||  ||||||||||||    
T  26115805 cagcggttaggattcttcaaatccccctatt 26115775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 11700683 - 11700587
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||||| |||||| |||| ||||||||||| |  ||||||| |||||| |||||||    
T  11700683 tgatggttggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca-agattgtcttttcgtttaaacaa 11700587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 9052659 - 9052772
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| ||||| ||||||| |||||||| || |||||||| ||||||||||  |  |||||| |||||  | |||||| |    
T  9052659 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaatt 9052757  T
Q  486 cgcgttacttatttt 500  Q
    | |||||||||||||    
T  9052758 cacgttacttatttt 9052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 19562284 - 19562178
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||| |||||||||| ||||| ||||||| |||||||||||||||||| | |||||| |||| | | ||||||||||| || |||||| | |  ||||    
T  19562284 ggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattac 19562185  T
Q  494 ttatttt 500  Q
    |||||||    
T  19562184 ttatttt 19562178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 473
Target Start/End: Original strand, 22526369 - 22526436
Alignment:
Q  406 tgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||| |||||||||| ||  ||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttc 22526436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 1833681 - 1833598
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||| ||||||||||||||||||||     ||||||| |||||||||||||||  || ||||| |||| ||||||||||    
T  1833681 aaatcgtttaccaagtaataaagtgataagtaga----tgtatccacatggattgtcgtttcaactgaacaattcgcattacttattt 1833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 12318420 - 12318477
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtaga 445  Q
    ||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||||||    
T  12318420 atggtcggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtaga 12318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 473
Target Start/End: Complemental strand, 12839888 - 12839807
Alignment:
Q  392 ttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||| |||||||| |||||| ||||||  ||||||| ||||| ||||| ||||||||||| | |||||||| ||||    
T  12839888 ttggattaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggattgtcatttc 12839807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 580 - 633
Target Start/End: Complemental strand, 22173474 - 22173421
Alignment:
Q  580 tttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    ||||| |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  22173474 tttggttgcagaaaagtaagcagcagttatgactctttaaatccccctatttat 22173421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 498
Target Start/End: Original strand, 3774809 - 3774923
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggat--tgtcgtttcgtctaaaca 482  Q
    |||||||| ||||||||||||||||  |||| |||||| | |||||||||||  ||||||| |||| |||||| ||| ||  ||||||||| || |||||    
T  3774809 gtgatggtcggattaggcaagtgtatcaaattgtttactaagtaataaagtg-caagtagagtatcatatccacatgaattgtgtcgtttcatccaaaca 3774907  T
Q  483 actcgcgttacttatt 498  Q
    | || |||||||||||    
T  3774908 attcacgttacttatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 17275833 - 17275896
Alignment:
Q  418 tttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaac 481  Q
    |||||||  |||||||||||||| ||||||||||||||||||   ||||| |||||||||||||    
T  17275833 tttaccaaataataaagtgataattagaatatcgtatccatagaaattgttgtttcgtctaaac 17275896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 633
Target Start/End: Complemental strand, 8969838 - 8969596
Alignment:
Q  383 gggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaaca 482  Q
    ||||||| || | ||||| ||||||||| ||||  ||||| | ||||||||||| ||||||||  | |||||| |    ||||||||||||||| |||||    
T  8969838 gggtgatcgtcgaattagacaagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaaca 8969740  T
Q  483 actcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggttt 582  Q
    | ||| ||||||||||||   ||||||||||  ||||||    ||||  |||||||||  |||||| ||| | | ||||||||||  |||||| |  |||    
T  8969739 attcgtgttacttattttgttttgacgatat--aataaa----ttaagggttagagattgcaatttatatctatatgcaacagagcaagttacat-tttt 8969647  T
Q  583 ggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
     | |||| |  |||||||||  |||||||||||| ||||||||||||||||    
T  8969646 tgttgcaaattagtaagcaatggttaggactcttcgaatccccctatttat 8969596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 20317876 - 20317807
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||||| |||||||| ||||||||||||||||| || |||||||| |||||||| || ||| |||||||||    
T  20317876 gcaagtatactaaattgtttaccatgtaataaaatg-taagtagagtatcgtattcacatgaattgtcgtt 20317807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 471
Target Start/End: Original strand, 10107007 - 10107080
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||||||||||||  ||||||||||||| |||||||| ||  ||||||| |||  |||||||| |||||||||||    
T  10107007 ttaggcaagtgtagcaaatcgtttaccaagtaataaattg-caagtagagtattctatccatagggattgtcgtt 10107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 15050185 - 15050084
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||  ||||| ||||||| ||||||||||| ||||||||||| |||   || |||||||||| || |  ||| |||| | ||||||||||    
T  15050185 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtagaataccgtgaacacatggattgtcattccaactagacaatttgcgttactta 15050087  T
Q  497 ttt 499  Q
    |||    
T  15050086 ttt 15050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 15104239 - 15104340
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||  ||||| ||||||| ||||||||||| ||||||||||| |||   || |||||||||| || |  ||| |||| | ||||||||||    
T  15104239 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtagaataccgtgaacacatggattgtcattccaactagacaatttgcgttactta 15104337  T
Q  497 ttt 499  Q
    |||    
T  15104338 ttt 15104340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 471
Target Start/End: Original strand, 19900576 - 19900649
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||||||||||||| |||| |||||||| ||||||||||| |||||||| |||| ||| || |  ||||||||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcacaaagattgtcgtt 19900649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 501
Target Start/End: Original strand, 10777392 - 10777464
Alignment:
Q  429 ataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||||||||||| ||| |||| ||   ||||||| |||||  |||||||||||| ||||||| |||||    
T  10777392 ataaagtgataagtagagtattgtattcacggggattgttgtttcaactaaacaactcgtgttacttgtttta 10777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 2e-72; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 385 - 633
Target Start/End: Original strand, 7318257 - 7318507
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |    
T  7318257 gtgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagc 7318356  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacct-ggtttg 583  Q
    |||| |||||||||||||||||||||||||||||||||||| |||  |||||||||  |||||||||| ||||||||||||||  |||||| |   ||||    
T  7318357 tcgcattacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttctttttg 7318456  T
Q  584 gctgcagaaaagtaagcaacagttaggactc-tttgaatccccctatttat 633  Q
    | |||||||||| || ||||  ||||||||| |||||||||||||||||||    
T  7318457 gttgcagaaaaggaaacaacgattaggactcttttgaatccccctatttat 7318507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 385 - 633
Target Start/End: Original strand, 9574391 - 9574639
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |  |||||| ||||||||||||| ||    
T  9574391 gtgatggtcagattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgac 9574490  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||   ||||||||| ||||||||| ||||  ||| ||||||||||     
T  9574491 tcgcgttatttattttaagttgacgatataaaataaaagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagtaacctggtttgt 9574590  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
     || |||||||||| || ||||||||| |||||||||||||||||||||    
T  9574591 ttgaagaaaagtaaacagcagttaggattctttgaatccccctatttat 9574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 386 - 633
Target Start/End: Original strand, 3734581 - 3734829
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  ||||||| |||||||| ||||  ||||||| |||||||||||||||||||| ||||||||||| ||| ||||| |||| ||| |||||| |    
T  3734581 tgatggtcagattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaatt 3734680  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    | ||||||||||||||||||||||||||||||||||||||||||  |||| ||||  ||| |||||| ||||||||||||||  ||||||||| |||||     
T  3734681 cacgttacttattttaagttgacgatataaaataaaagagttaagggttaaagattgcaaattttatctgtttgcaacagagcaagttacctgttttggt 3734780  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatc-cccctatttat 633  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  3734781 tgcagaaaagtaagcaatggttaggactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 407 - 633
Target Start/End: Complemental strand, 8313488 - 8313259
Alignment:
Q  407 gtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactc---gcgttacttattttaag 503  Q
    |||| ||||| ||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||    | |||||||||||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaag 8313389  T
Q  504 ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaac 603  Q
    |||| | |||||||||||||||||||  |||||||||  |||||||||| ||||| ||||||||  ||||||||  ||||| ||||||||||||||||||    
T  8313388 ttgaaggtataaaataaaagagttaagggttagagattgcaatttttatctgttttcaacagagcaagttacctattttggttgcagaaaagtaagcaac 8313289  T
Q  604 agttaggactctttgaatccccctatttat 633  Q
    | ||||||||||| ||||||||||||||||    
T  8313288 atttaggactcttggaatccccctatttat 8313259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 386 - 626
Target Start/End: Complemental strand, 17153268 - 17153027
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||  |||||||  |||| |||||||| |||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||    
T  17153268 tgatggtcggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagct 17153169  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||||    |||||||| ||||||||||| ||  |||||||||  |||||    
T  17153168 cgcgttacttattttaagttgacgacataaaataaaagagataagggttagagattgttatttttatctgtttgcaacaaagcaagttacctgtttttgg 17153069  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
     |||||||||||||||| | |||| |||||||||||||||||    
T  17153068 ttgcagaaaagtaagcagcggttatgactctttgaatccccc 17153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 390 - 633
Target Start/End: Complemental strand, 10587134 - 10586890
Alignment:
Q  390 ggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcg 489  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||||||||||||||||  |    
T  10587134 ggttggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatg 10587035  T
Q  490 ttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtt-tggctgc 588  Q
    |||||||||||||||| || |||||||||||||||  |||  |||| ||||  |||||||||| ||||||||||||||  || ||| || || ||| |||    
T  10587034 ttacttattttaagtttacaatataaaataaaagaaataagggttaaagattgcaatttttatctgtttgcaacagagcaagatacatgtttctggttgc 10586935  T
Q  589 agaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    | |||||||||||   |||| |||||||||||||||| |||||||    
T  10586934 aaaaaagtaagcagtggttaagactctttgaatccccttatttat 10586890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 386 - 626
Target Start/End: Original strand, 15869580 - 15869820
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||||  | ||||| | |||| ||||||| |       
T  15869580 tgattgttggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtc 15869679  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
     |||||||||||||||||||||||||||||||||||| || |||  ||| |||||  ||| |||||| ||||||||| ||| | |||||||||  |||||    
T  15869680 tgcgttacttattttaagttgacgatataaaataaaatagataagggtttgagattgcaa-ttttatctgtttgcaatagaaaaagttacctgtttttgg 15869778  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
     |||| |||||||| |||| ||||||||||||||||||||||    
T  15869779 ttgcataaaagtaaacaacggttaggactctttgaatccccc 15869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 394 - 559
Target Start/End: Original strand, 4986548 - 4986713
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||| | |||||| ||| ||| ||| |||||||||||||||||||||| | ||||||||||    
T  4986548 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttac 4986647  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttg 559  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||||  |||||||||| ||||||    
T  4986648 ttattttaagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 394 - 559
Target Start/End: Original strand, 4990646 - 4990811
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||| | |||||| ||| ||| ||| |||||||||||||||||||||| | ||||||||||    
T  4990646 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttac 4990745  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttg 559  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||||  |||||||||| ||||||    
T  4990746 ttattttaagttgacgataaaaaataaaagtgttaagggttagagattgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 394 - 628
Target Start/End: Original strand, 18662434 - 18662667
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||| |||||||||  ||||||||||||| | | |||||||||||||||| ||||||||||| | |||||||||||||||| |||||| || ||||||    
T  18662434 ggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttac 18662533  T
Q  494 ttattttaagttgacgatata-aaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    ||||||   ||  || | ||| |||||||||| || | ||||||| ||  |||||||||||||||||||||||||  ||||||||| ||||| |||||||    
T  18662534 ttattt--ggtgaacaaaatataaataaaagatttgagagttagatattgcaatttttatttgtttgcaacagagcaagttacctgttttggttgcagaa 18662631  T
Q  593 aagtaagcaacagttaggactctttgaatcccccta 628  Q
    | ||||||| | |||||||||||| |||||||||||    
T  18662632 atgtaagcagcggttaggactcttcgaatcccccta 18662667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 397 - 636
Target Start/End: Original strand, 4785833 - 4786077
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||  |||||||| |||| |||||||||||||||||||| ||||  ||||| | |||||||||||||||| || ||  || |||||||||    
T  4785833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttactta 4785931  T
Q  497 ttttaagttgacgatataaaataaaagagttaaaagttagagatatcaa----tttttatttgtttgcaacagagatagttacctg-gtttggctgcaga 591  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| |  |    ||||||| | ||||||| ||||  |||||||||  ||||| ||||||    
T  4785932 tttttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaagttacctgtttttggttgcaga 4786031  T
Q  592 aaagtaagcaacagttaggactctttgaatccc-cctatttatatt 636  Q
    |||||||||| | ||||||| |||| ||||||| ||||||||||||    
T  4786032 aaagtaagcagcggttaggattcttcgaatccctcctatttatatt 4786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 633
Target Start/End: Original strand, 6013587 - 6013825
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| ||||| |||| || ||| | |||||||||||||| ||||||||||| | ||||| || |||  || |||||| | || |||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttact 6013686  T
Q  495 tattttaagttgacgatataaaataaaagagttaaaagttagagatatcaa-tttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    |||||||  |||| |||||||||||||||||| ||  ||||| |||  ||| ||||||||||||||||||| ||  | |||| | |||||| ||||||||    
T  6013687 tattttagtttgatgatataaaataaaagagtaaagggttagcgattgcaattttttatttgtttgcaacaaagcaatttacat-gtttggttgcagaaa 6013785  T
Q  594 agtaagcaacagttaggactctttgaatccccctatttat 633  Q
    ||| |||||| |||| ||||||||||||||| ||||||||    
T  6013786 agtgagcaacggttatgactctttgaatccctctatttat 6013825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 16365698 - 16365942
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||  |||||||| ||||||||||||| |||||||||| | ||||||| ||||||||||| |||||||||||||| ||  |||||| |||||||||    
T  16365698 ggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttac 16365797  T
Q  494 tta-ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatagttacctg-gtttggctgcag 590  Q
    ||| |||||||||||||||||  ||||||||||||||   ||||||| | |||||||| || | |||||| | |||  |||||| ||  ||||| ||||     
T  16365798 ttatttttaagttgacgatat--aataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaa 16365895  T
Q  591 aaaagtaagcaacagttaggactctttgaatc-cccctatttatatt 636  Q
    ||||||||||| | ||||||| |||| ||||| ||||||||||||||    
T  16365896 aaaagtaagcagcggttaggattcttcgaatctcccctatttatatt 16365942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 385 - 512
Target Start/End: Original strand, 1584529 - 1584654
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||||||||||||||| || || ||||||| ||||||||||||||||| || ||||||||||| | ||||||| |||||||||||||||     
T  1584529 gtgatggtcggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaa 1584626  T
Q  485 tcgcgttacttattttaagttgacgata 512  Q
    ||||||||||||||||||||||||||||    
T  1584627 tcgcgttacttattttaagttgacgata 1584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 386 - 625
Target Start/End: Original strand, 1587666 - 1587904
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||| ||||| ||||||||||| | ||| ||||||||||| |||| |||| |||| | || ||| || ||||| || |||||| |    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaatt 1587765  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatat--caatttttatttgtttgcaacagagatagttacctggtttg 583  Q
    |||||||| ||||||   ||||||||||||||||||||| || |  |||||||| ||  |||||||||||||||||||||||||  ||||||||   |||    
T  1587766 cgcgttacctattttgttttgacgatataaaataaaaga-tttagggttagagagattgcaatttttatttgtttgcaacagagcaagttacct--cttg 1587862  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    | |||||||||||||||| | | || || |||||||||||||    
T  1587863 gttgcagaaaagtaagcagcggatatgaatctttgaatcccc 1587904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 393 - 636
Target Start/End: Original strand, 5108558 - 5108801
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    |||||| ||||||||||| ||||  ||||||| ||||||||||| |||||||| ||||||||||| | |||||||||||||||| |||||| |||    |    
T  5108558 tggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcg-aaca 5108655  T
Q  493 ctta-ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatagttacctgg--tttggctgc 588  Q
    |||| |||||||||||||||||  |||||||||||  |  |||||||| |  |||||||||| ||||||||| ||||  ||||  || |  ||||| |||    
T  5108656 cttatttttaagttgacgatat--aataaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttggttgc 5108753  T
Q  589 agaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  5108754 agaaaagtaagcagcggttaggattctttgaatccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 540
Target Start/End: Original strand, 4818833 - 4818975
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||  |||||||| |||| |||||||||||||||||||| ||||  ||||| | |||||||||||||||| || ||  || |||||||||    
T  4818833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttactta 4818931  T
Q  497 ttttaagttgacgatataaaataaaagagttaaaagttagagat 540  Q
    |||| ||||||||||||||||||||||||||||  |||||||||    
T  4818932 tttttagttgacgatataaaataaaagagttaagggttagagat 4818975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 388 - 499
Target Start/End: Complemental strand, 9864438 - 9864327
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| | |    
T  9864438 atggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttg 9864339  T
Q  488 cgttacttattt 499  Q
    ||||||||||||    
T  9864338 cgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 394 - 636
Target Start/End: Complemental strand, 9731733 - 9731490
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||  | ||| |||||||||||||||| ||||||| ||| | |||||||||||||||| |||||| |||||||||    
T  9731733 ggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttac 9731634  T
Q  494 ttattttaag-ttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctg-gtttggctgcag 590  Q
    ||||||| || |||| |  |||||||||||||||||  | |||||||| | |||||||||| | | || |||| ||  |||||||||  ||||| ||||     
T  9731633 ttatttttagtttgatg--ataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaagttacctgtttttggttgcat 9731536  T
Q  591 aaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||||||| | ||||||  |  | ||||||| |||||||||||    
T  9731535 aaaagtaagcagcggttagggttgatcgaatcccactatttatatt 9731490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 386 - 616
Target Start/End: Original strand, 31492915 - 31493141
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||| |||||||||||  ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||| |||||| |    
T  31492915 tgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatt 31493014  T
Q  486 cgcgttacttattttaagttgacgatata--aaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttg 583  Q
     |  ||||||||||| |    || ||| |  ||||||||||||| |  |||||||    |||||||||| ||||||||||||||  |||||| || ||||    
T  31493015 tgttttacttattttga----acaataaaataaataaaagagttgagggttagag--tgcaatttttatctgtttgcaacagagtcagttacttgttttg 31493108  T
Q  584 gctgcagaaaagtaagcaacagttaggactctt 616  Q
    | || ||||| ||||||||| ||||||| ||||    
T  31493109 gttgtagaaatgtaagcaacggttaggattctt 31493141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 11221279 - 11221164
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||||||||||| |||||||||| ||||||||||| | |||||||| ||||||||||| ||| ||||||| | ||||||||||||||| |||||||     
T  11221279 gtgatggttggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaat 11221180  T
Q  485 tcgcgttacttatttt 500  Q
    | ||||||||||||||    
T  11221179 ttgcgttacttatttt 11221164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 400 - 636
Target Start/End: Complemental strand, 18369080 - 18368842
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||| ||  |||||||||||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T
Q  500 ---taagttgac-gatataaaata-aaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaa 593  Q
       |||||||||  |||||||| | |||| |||| ||  | | |    |||||||||| ||||||||||| ||  |||||||||  ||||| || |||||    
T  18368980 ttataagttgacaaatataaaagataaagggttagaaagtcgtg----caatttttatctgtttgcaacaaagcaagttacctgcttttggttgtagaaa 18368885  T
Q  594 agtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||| ||| ||||||| || |||||||||||| | ||||||    
T  18368884 agtaagaaacggttaggattccttgaatccccctgtctatatt 18368842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 400 - 532
Target Start/End: Complemental strand, 8054589 - 8054454
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| || | | |||||||||||||| |||||| ||  |||||||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  500 ---taagttgacgatataaaataaaagagttaaaag 532  Q
       |||||||||||||||||| | ||||||||||||    
T  8054489 ttgtaagttgacgatataaaagataagagttaaaag 8054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 2563811 - 2564054
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||| |||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||| | |||||||||||||||| |||||| | | |||||    
T  2563811 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttac 2563909  T
Q  494 ttattt---taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctggttt-ggctg 587  Q
    ||||||   |||||| |||||||  |||||||||  |||  |||||||| |   ||||||||| ||||||||||||||  || ||||||| ||| |  ||    
T  2563910 ttatttctgtaagttcacgatat--aataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttg 2564005  T
Q  588 cagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||||| | | |||||||  ||| |||||||||| ||||||||    
T  2564006 cagaaaagtaagtagcggttaggatccttcgaatccccctgtttatatt 2564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 625
Target Start/End: Complemental strand, 8054158 - 8053937
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||| ||| |||||||||   || |||||| || | ||||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattt 8054062  T
Q  500 ---taagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaag 595  Q
       |||||||||||||||||| | ||||||||||    |||  | | || |||||| | ||||||| | ||  || ||||||| ||||| ||||||||||    
T  8054061 ttgtaagttgacgatataaaagataagagttaaa----agacttgt-aaattttatctatttgcaatatagcaagtttacctgttttggttgcagaaaag 8053967  T
Q  596 taagcaacagttaggactctttgaatcccc 625  Q
    |||||| ||||||||| |||||||||||||    
T  8053966 taagcagcagttaggattctttgaatcccc 8053937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 530
Target Start/End: Complemental strand, 23100056 - 23099924
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||| || ||  ||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcccgacactt 23099957  T
Q  496 attttaagttgacgatataaaataaaagagttaaa 530  Q
    || || ||||||  |  ||||||||||||||||||    
T  23099956 atgtttagttga--aagtaaaataaaagagttaaa 23099924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 603
Target Start/End: Complemental strand, 2350853 - 2350643
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||| ||||||| |||||||| || |||||||| ||||||||||| |||||||||||||| ||| ||| ||  |||||||     
T  2350853 ggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgttaa 2350754  T
Q  494 ttattttaag-ttgacgatataaaataaaagagttaaa-agttagaga-tatcaatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
     |||||| || ||||  | ||||||||||| |||||||  |||||||| | ||||||||||| ||||| ||||| |   | ||||||| ||||| ||||     
T  2350753 atatttttagtttga--agataaaataaaatagttaaagggttagagattttcaatttttatctgtttacaacacatcaaattacctgttttggttgcaa 2350656  T
Q  591 aaaagtaagcaac 603  Q
    |||||||||||||    
T  2350655 aaaagtaagcaac 2350643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 8979120 - 8979006
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  || |||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||| ||||||||| |||||||| |||||| |    
T  8979120 tgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatt 8979021  T
Q  486 cgcgttacttatttt 500  Q
    ||| |||||||||||    
T  8979020 cgcattacttatttt 8979006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 499
Target Start/End: Complemental strand, 10584600 - 10584487
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||| | | ||||||||||| ||||||||||||||| |  |||||| |    
T  10584600 tgatgtttggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaatt 10584501  T
Q  486 cgcgttacttattt 499  Q
    || |||||||||||    
T  10584500 cgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 396 - 512
Target Start/End: Original strand, 12181603 - 12181720
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgt-ctaaacaactcgcgttact 494  Q
    ||||||||||| ||| ||||||||||  | |||||||||||| ||||||| || |||||||| ||| ||||||||||||| | |||||| ||| ||||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttact 12181702  T
Q  495 tattttaagttgacgata 512  Q
    ||||||||||||||||||    
T  12181703 tattttaagttgacgata 12181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 13759957 - 13759860
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||| |||||||||||||  ||||||||||||||||||| |||| |||||| | |||||||||||||||| |||||  ||||||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttt 13759860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 18449223 - 18449340
Alignment:
Q  383 gggtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaac 481  Q
    |||||||||| ||||| |||||||||||  |||| |||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||  | ||||    
T  18449223 gggtgatggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaac 18449322  T
Q  482 aactcgcgttacttattt 499  Q
    || | |||||||||||||    
T  18449323 aattggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 18495358 - 18495471
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| |||||||||||||| |||||| | |||||||||||||||||| | ||  ||||||||  ||||||||||||||||||||||| |    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatt 18495457  T
Q  486 cgcgttacttattt 499  Q
     | |||||||||||    
T  18495458 tgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 21230297 - 21230410
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||||||||||| ||  |||||||||||||  ||||||| ||||||||||| |||||||| |||| ||||| ||||||||||||| ||| |    
T  21230297 tgatggttggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatt 21230396  T
Q  486 cgcgttacttattt 499  Q
     | |||||||||||    
T  21230397 tgtgttacttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 426 - 626
Target Start/End: Complemental strand, 3191133 - 3190935
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagag 525  Q
    |||||||||||| ||||| | |||  |||| ||| |||||||||||||||| |||||| ||| |||| |||||||||||||| ||||||||| ||||| |    
T  3191133 gtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttattttaagttgaggatataaaacaaaaggg 3191034  T
Q  526 ttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    ||    |||||||||   ||||||||| ||||||||||||| | ||||| ||  ||||| |||||||||||||| | |   ||||||| |||||||||||    
T  3191033 ttttgggttagagattgtaatttttatatgtttgcaacagaca-agttatct-atttggttgcagaaaagtaagtagcgagtaggactatttgaatcccc 3190936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 10937586 - 10937674
Alignment:
Q  386 tgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||    
T  10937586 tgatggttggatttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 10937674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 9245164 - 9245279
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||| |||||||||||||||| |||||  |||||||||||| |||| ||| || |||| ||| ||||||||||| |||||||||| |||||| |||||||    
T  9245164 ggtggtggttggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaa 9245263  T
Q  484 ctcgcgttacttattt 499  Q
     ||| |||||||||||    
T  9245264 ttcgtgttacttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 9500439 - 9500542
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| ||||| ||||||| ||||||| ||||| | |||| ||||||||||| | ||||||| ||||||||||||||| |||| ||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattactt 9500538  T
Q  496 attt 499  Q
    ||||    
T  9500539 attt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 16297925 - 16297818
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| ||||  ||||||| ||||||| |||||||||||| |||||||| || |||||||||| ||||||| |||||| || | |||||    
T  16297925 gattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattcacattact 16297826  T
Q  495 tattttaa 502  Q
    ||||||||    
T  16297825 tattttaa 16297818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 3329764 - 3329658
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||| |||||||  ||||  ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||   |||||||    
T  3329764 ggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttac 3329665  T
Q  494 ttatttt 500  Q
    |||||||    
T  3329664 ttatttt 3329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 515
Target Start/End: Original strand, 12329667 - 12329797
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||| ||||| ||||||||||||| |||| ||| |||||| |||| ||| ||||||| | |||||||||||| | | ||| ||      
T  12329667 tgatggtcggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatc 12329766  T
Q  486 cgcgttactta-ttttaagttgacgatataa 515  Q
    ||||||||||| |||||||||||||||||||    
T  12329767 cgcgttacttatttttaagttgacgatataa 12329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 630
Target Start/End: Complemental strand, 14196086 - 14195842
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| |||||||||| ||  |||||||||| |||||| | || |||||||| | | ||| | |||||||| |||||| |    
T  14196086 tgatggtcagattaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaatt 14195988  T
Q  486 cgcgttacttattttaagttgacgatata-aaataaaagagttaaaag-ttagagatatcaatttttatttgtttgcaacagagatagttacctggtttg 583  Q
    ||||||||||| |||   || || | ||| ||||||||||||| |  | | ||||||  |||||||||| ||||||||||||||  ||||| ||| ||||    
T  14195987 cgcgttactta-tttcgtttaacaaaatataaataaaagagttgatggataagagattgcaatttttatctgtttgcaacagagcaagttatctgttttg 14195889  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
      |||||||| |||||||||| ||| || |||| |||||||||||||    
T  14195888 attgcagaaatgtaagcaacaattaagattcttcgaatccccctatt 14195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 426 - 599
Target Start/End: Complemental strand, 7492337 - 7492163
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta-ttttaagttgacgatataaaataaaaga 524  Q
    |||||||| ||||||||||| ||||||||||| | ||||||| |||||||  |||||| | || ||||||| |||||  |||| |||||  |||||||||    
T  7492337 gtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttattttgatgatat--aataaaaga 7492240  T
Q  525 gttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaaagtaag 599  Q
    |||||  ||||||||| | |||||||||  ||||||||||||||  |||||||||  ||||| ||||||||||||||    
T  7492239 gttaagggttagagatttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaagtaag 7492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 624
Target Start/End: Original strand, 20582258 - 20582479
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||| |||| |||||||||||||  ||||||||||||||||    ||||||||||| | |||| |||||||| || | |||| || ||||||||| ||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagtg---tatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaatt 20582354  T
Q  500 t---aagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaa 594  Q
    |   |||||||||||||||||   ||| |||||||     |||| | |||||||||| | ||||||||||||  |||| ||||| ||||| |||||||||    
T  20582355 ttataagttgacgatataaaaggtaagggttaaaa-----agatttgcaatttttatctatttgcaacagagcaagtttacctgttttggttgcagaaaa 20582449  T
Q  595 gtaagcaacagttaggactctttgaatccc 624  Q
    ||||||| ||||||||| |||| |||||||    
T  20582450 gtaagcagcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 472
Target Start/End: Original strand, 7397180 - 7397266
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgttt 472  Q
    ||||||||||||||||| |||||||| ||| ||||||||| ||||||||||| ||| |||| ||||||||||| ||||||||||||||    
T  7397180 gtgatggttggattaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 384 - 483
Target Start/End: Original strand, 9261187 - 9261286
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||| |||||||||||||||| | |||  |||||||||||| |||| ||| ||||||| ||| |||||||||||||||||||||| |||||| |||||||    
T  9261187 ggtggtggttggattaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttcgtttaaacaa 9261286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 500
Target Start/End: Complemental strand, 39273270 - 39273175
Alignment:
Q  405 gtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||| |||||| |||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| || | | ||||||||||||    
T  39273270 gtgtcctaaattgtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttt 39273175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 6042454 - 6042685
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||||||||  |||||||||||||||||||||| || |||||||| ||||||||||| |  | ||||||||||||  |||||| | |||||||    
T  6042454 ggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttac 6042552  T
Q  494 ttattttaag-ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacc-tggtttggctgcaga 591  Q
    ||||||| || |||||| |||||           |||||| ||||  |  |||||||||| |||||||||||||||   ||||| |  ||||| ||||||    
T  6042553 ttatttttagtttgacggtataa-----------taaaagatagatgttgcaatttttatatgtttgcaacagagaagtttacctttttttggttgcaga 6042641  T
Q  592 aaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||| |||||| | ||||||| ||||||||| ||||||||||||||    
T  6042642 aaaataagcagcggttaggattctttgaat-cccctatttatatt 6042685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 11803105 - 11803179
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| ||||||||||| | |||||||| ||||||| |||||| ||||||||||||||||    
T  11803105 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttt 11803179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 19153283 - 19153407
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||| ||||||| ||||||||||||||| | || ||||  ||||  |||| ||||||||| ||| ||| ||||    
T  19153283 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataact 19153380  T
Q  486 cgcgttacttattttaagttgacgata 512  Q
    |||||||||||||||||| ||||||||    
T  19153381 cgcgttacttattttaaggtgacgata 19153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 20752682 - 20752806
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||| ||||||| ||||||||||||||| | || ||||  ||||  |||| ||||||||| ||| ||| ||||    
T  20752682 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataact 20752779  T
Q  486 cgcgttacttattttaagttgacgata 512  Q
    |||||||||||||||||| ||||||||    
T  20752780 cgcgttacttattttaaggtgacgata 20752806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 14755244 - 14755135
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| ||||||||| |||||||||| || ||| |||||||| ||||||| |||| |||||| | | ||||| ||||||||||||||||     
T  14755244 tgatggtcggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaacc 14755145  T
Q  486 cgcgttactt 495  Q
    || |||||||    
T  14755144 cgtgttactt 14755135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 636
Target Start/End: Complemental strand, 1848325 - 1848091
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| |||| ||  |||| |||||||||||||||||| | |||||||||||   |||||||| ||||||| |||||| | |||||||||||||    
T  1848325 ggcaagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttattt 1848228  T
Q  500 ---taag-ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaa 594  Q
       |||| ||||||||||||||   ||| ||||      |||| |  |||||||||| |||||| |||||||  || ||||||| ||||| |||||||||    
T  1848227 ttgtaagtttgacgatataaaaattaagggtta-----gagagcttgcaatttttatctgtttgaaacagagcaagtttacctgttttggttgcagaaaa 1848133  T
Q  595 gtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||| | |||| || |||| ||||| |||||| ||||||    
T  1848132 gtaagcagcggttatgattcttcgaatctccctatatatatt 1848091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 386 - 468
Target Start/End: Original strand, 5797496 - 5797578
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtc 468  Q
    ||||||| ||||||||||||||||  |||||| |||||| |||||||||| ||||||||| ||||||||||| ||| ||||||    
T  5797496 tgatggtcggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtc 5797578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 17203009 - 17203122
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||| |||| ||||| |||||  | |||||||||| ||||||||| |||||||| ||   |||||||||||||||| ||||||      
T  17203009 tgatggtcggattaggcaaatgtattaaattgtttatgaagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatc 17203107  T
Q  486 cgcgttacttatttt 500  Q
    |||||||||||||||    
T  17203108 cgcgttacttatttt 17203122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 5530006 - 5530119
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||||| |||||| |||| |||||||| |||||||| ||||||||| |  |||||||||| |  |||| |||||||||| |||||| |    
T  5530006 tgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatt 5530105  T
Q  486 cgcgttacttattt 499  Q
     | |||||||||||    
T  5530106 tgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 10648589 - 10648678
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||||||| ||||||||||||||| |||| |||| ||| |  | ||||||||||||| ||||||||| ||| |||||||||||||    
T  10648589 aaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttta 10648678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 16306679 - 16306792
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| ||||||||  ||||| |||| || |||||||||||||||||||| ||||||||| | | ||||| || |||| ||||||||| |    
T  16306679 tgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatt 16306778  T
Q  486 cgcgttacttattt 499  Q
     || ||||||||||    
T  16306779 tgcattacttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 9916562 - 9916638
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||| ||| ||||| ||||||| |||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttc 9916638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 9924474 - 9924550
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||| ||| ||||| ||||||| |||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttc 9924550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 394 - 517
Target Start/End: Original strand, 17077121 - 17077247
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||| ||||| |||| ||||| ||  ||||||||||||| ||||| ||| ||||||||  |||||||||||||||| |||||| ||  |||||    
T  17077121 ggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttac 17077220  T
Q  494 ttattt---taagttgacgatataaaa 517  Q
    ||||||   |||||||||| |||||||    
T  17077221 ttatttttgtaagttgacggtataaaa 17077247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 487 - 562
Target Start/End: Original strand, 1584318 - 1584393
Alignment:
Q  487 gcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaa 562  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||||||  |||||||||| | |||||||    
T  1584318 gcgttacttattttgttttgacgatataaaataaaagagttaaaggttagagattgcaatttttatctttttgcaa 1584393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 501
Target Start/End: Original strand, 1872770 - 1872885
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||||||||||   |||||||| || | |||||| | ||||||||||| ||||||||||| ||   |||||||||| |  |||||| |    
T  1872770 tgatggttggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaatt 1872869  T
Q  486 cgcgttacttatttta 501  Q
    || |||||||||||||    
T  1872870 cgtgttacttatttta 1872885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 388 - 499
Target Start/End: Original strand, 4579085 - 4579195
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| ||| ||||||||||| | ||||||||||| | ||||||| |||||||||||| ||||||||||| |  ||||||| ||| ||| |||||| |||    
T  4579085 atggtcggactaggcaagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcg 4579183  T
Q  488 cgttacttattt 499  Q
     |||||||||||    
T  4579184 tgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 13418533 - 13418653
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaa-gtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta-- 496  Q
    ||||||||||| || ||||| |||| |||||||| |||||||||||| ||||||||||||| |||||||| ||||||| |||||  |  |||||||||      
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatt 13418631  T
Q  497 -ttttaagttgacgatataaaa 517  Q
     ||||||||||||| |||||||    
T  13418632 tttttaagttgacggtataaaa 13418653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 498
Target Start/End: Complemental strand, 26134863 - 26134750
Alignment:
Q  385 gtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||||||||||| || ||||||||| ||||||||||||| |||||||| || |||||||| ||||||||||| || || |||| ||||  ||| ||||    
T  26134863 gtgatggttggatttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccacatagactgtcatttcaactagacaa 26134765  T
Q  484 ctcgcgttacttatt 498  Q
     || |||||||||||    
T  26134764 ttcacgttacttatt 26134750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 1882354 - 1882467
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||||||||||   ||||||||||| | |||||| | |||||| |||  ||| ||||||||||  || |||||||| | ||||||| |    
T  1882354 tgatggttggattaggcaagtgtgacaaatcgtttactaagtaatacaatgataactagggtattgtatccatataaatggtcgtttcatataaacaatt 1882453  T
Q  486 cgcgttacttattt 499  Q
     |||||||||||||    
T  1882454 tgcgttacttattt 1882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 426 - 499
Target Start/End: Original strand, 18467476 - 18467549
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||| |   |||||||||||    
T  18467476 gtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 499
Target Start/End: Original strand, 6005821 - 6005934
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| |||||||| |||| ||| |||| ||||||||  ||||||| || |||  ||| ||| ||||||| |||||||||||||| ||| ||||||     
T  6005821 gtgatggtcggattaggtaagtttaccaaattgtttaccaattaataaattg-taaccagagtattgtatccacatggattgtcgtttggtccaaacaat 6005919  T
Q  485 tcgcgttacttattt 499  Q
    || ||||||||||||    
T  6005920 tcacgttacttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 499
Target Start/End: Original strand, 18465986 - 18466103
Alignment:
Q  383 gggtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaac 481  Q
    ||||||||||| |||| |||||||  ||| ||||| |||| ||  ||||||||||||||||||| || |||||||||| ||||| |||||||  | ||||    
T  18465986 gggtgatggttagatttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaac 18466085  T
Q  482 aactcgcgttacttattt 499  Q
    || | | |||||||||||    
T  18466086 aatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 499
Target Start/End: Complemental strand, 22339431 - 22339312
Alignment:
Q  383 gggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaata---aagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaa 479  Q
    |||||||||| | ||||| ||| ||||| ||||| |||| || ||||||   |||||||||||| | ||||| ||||  | |||||||||||||||| ||    
T  22339431 gggtgatggtcgaattagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaa 22339332  T
Q  480 acaactcgcgttacttattt 499  Q
    |||| |||| ||||||||||    
T  22339331 acaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 23093306 - 23093381
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||||||| ||||||||||| | ||||||||||| |||||||| ||| ||||| |  ||||||||||||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgtttc 23093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 455
Target Start/End: Original strand, 9890183 - 9890237
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatc 455  Q
    |||||||||||||||||||||||  ||||||||||  |||||||| |||||||||    
T  9890183 gcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatc 9890237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 626
Target Start/End: Original strand, 9131019 - 9131136
Alignment:
Q  512 ataaaataaaagagttaaaag-ttagagatat-caatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaaagtaagcaacagtta 608  Q
    ||||||||||||||||||  | |||||||| | |||||||||||||||||||| ||||  ||||| |||  ||||| |||| ||||||||||  | ||||    
T  9131019 ataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagctgcggtta 9131118  T
Q  609 ggactctttgaatccccc 626  Q
    ||| |||| |||||||||    
T  9131119 ggattcttcgaatccccc 9131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 623
Target Start/End: Original strand, 13418663 - 13418744
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcc 623  Q
    |||||||||| ||||||||||||||  |||| ||||| ||||  ||||| |||||||||| | ||||||| |||||||||||    
T  13418663 caatttttatctgtttgcaacagagcaagtttacctgttttgattgcagcaaagtaagcagcggttaggattctttgaatcc 13418744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 5047489 - 5047434
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgta 453  Q
    |||||||||||||| ||||| ||||||| ||||||||||| |||||||| |||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtg-taagtagattatcgta 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 457
Target Start/End: Original strand, 18661590 - 18661646
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    |||||||||| |||||||||||||   |||||||||||||||||| ||| |||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatcca 18661646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 21885258 - 21885157
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||| | |||||| ||||    |||||||||| |||||| ||| ||  ||||||||||||||  | |||||| || ||||||    
T  21885258 ggattaggcaagtgtaccaaatgggttaccaagtaa----gtgataagtaaaatatcatattcacgtggattgtcgtttcaaccaaacaattcacgttac 21885163  T
Q  494 ttattt 499  Q
    ||||||    
T  21885162 ttattt 21885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 500
Target Start/End: Original strand, 8877441 - 8877520
Alignment:
Q  421 accatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||| ||||||| |||||||||||| ||||||||||| |||||||| | ||| ||| |||||| || |  ||||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaattctctgtacttatttt 8877520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 16059096 - 16059021
Alignment:
Q  426 gtaataaagtga-taagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||| | |||||||| ||||||||||| |||||||||| ||||||| |||||| |   ||||||||||||    
T  16059096 gtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttt 16059021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 601
Target Start/End: Complemental strand, 16297815 - 16297732
Alignment:
Q  519 aaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacct-ggtttggctgcagaaaagtaagca 601  Q
    |||||||||||  |||||| ||  |||||||||| ||||||||||||||  ||||||||   ||||| ||||||||||||||||    
T  16297815 aaaagagttaagggttagaaattgcaatttttatatgtttgcaacagagtaagttacctatttttggttgcagaaaagtaagca 16297732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 455
Target Start/End: Original strand, 21227162 - 21227233
Alignment:
Q  386 tgatggttggatt-aggcaag-tgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatc 455  Q
    ||||||||||||| ||||||  ||||| ||||| ||||| | |||||||||||||||||||| |||||||||    
T  21227162 tgatggttggatttaggcaaaatgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 13277528 - 13277578
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    |||||| |||||||| |||| ||||||||||| |||||||||| |||||||    
T  13277528 gtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtc 13277578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 455
Target Start/End: Complemental strand, 15303723 - 15303666
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatc 455  Q
    |||| ||||||||| ||||||||||||| ||||||||||| |||||| | |||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatc 15303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 33035469 - 33035522
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcg 451  Q
    |||||||||||||  ||||||||||||| |||||||||||||| ||||| |||||    
T  33035469 ttaggcaagtgtatcaaatcgtttacca-gtaataaagtgataggtagagtatcg 33035522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 593
Target Start/End: Complemental strand, 8293997 - 8293948
Alignment:
Q  544 aatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    ||||||||| ||||||||||||||  ||||||||| ||||| ||||||||    
T  8293997 aatttttatctgtttgcaacagagcaagttacctgttttggttgcagaaa 8293948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 633
Target Start/End: Original strand, 17829712 - 17829801
Alignment:
Q  544 aatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    ||||||||| |||||||||||||   ||||| ||| ||||| || |||||| ||||||   |||| || |||| ||||||||||||||||    
T  17829712 aatttttatctgtttgcaacagaacaagttaactgttttggttggagaaaattaagcagtggttaagattcttcgaatccccctatttat 17829801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 21912586 - 21912481
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||| |||||||||||  |||| ||||| ||  |||||||||||||||| || ||||||||| |   |||||||||||||  | ||||||  | ||||||    
T  21912586 ggatcaggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttcaacaaaacaatccacgttac 21912487  T
Q  494 ttattt 499  Q
    ||||||    
T  21912486 ttattt 21912481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 611
Target Start/End: Complemental strand, 22067197 - 22067128
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttagga 611  Q
    |||||||||| ||| ||||||| ||| | || ||||| ||||| |||||||||||||||||| |||||||    
T  22067197 caatttttatatgtctgcaacaaagagaatttacctgttttggttgcagaaaagtaagcaacggttagga 22067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 1814109 - 1814153
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgata 439  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||    
T  1814109 gattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 599
Target Start/End: Original strand, 6006084 - 6006136
Alignment:
Q  547 ttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaag 599  Q
    |||||| ||||||||||||||  ||||||||| |||||  |||||||||||||    
T  6006084 ttttatctgtttgcaacagagtaagttacctgttttggtggcagaaaagtaag 6006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 8877562 - 8877646
Alignment:
Q  543 caatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaa-agtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  || ||||||  ||||| |||| ||| |||||||| | ||||||| |||||||||||||    
T  8877562 caatttttatctgtttgcaacagagcaagtttacctattttggttgcaaaaatagtaagcagcggttaggattctttgaatcccc 8877646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 575
Target Start/End: Complemental strand, 11221122 - 11221090
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttac 575  Q
    |||||||||||||||||||||||||| ||||||    
T  11221122 caatttttatttgtttgcaacagagaaagttac 11221090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 12391181 - 12391257
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||||||| |||| ||||| ||  ||||||||||||||| ||| | |||||| || | | |||||||||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttc 12391257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 8e-69; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 394 - 645
Target Start/End: Complemental strand, 12183437 - 12183185
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||| |||||||  ||||| || ||||||    
T  12183437 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttac 12183338  T
Q  494 ttattttaagttgacgatataaaataaaagag-ttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||  |||| ||||| ||||||||||| ||  ||||||||| ||||| | |||||    
T  12183337 ttattttaaggtgacgatataaaataaaagagtttaaaggttagagattgcaatgtttatctgtttgcaacatagcaagttacctgttttggttacagaa 12183238  T
Q  593 aagtaagcaacagttaggactctttgaatccccctatttatattcttcgacat 645  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||| || |||||    
T  12183237 aagtaagcaacggttaggattcttcgaatccccctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 386 - 631
Target Start/End: Original strand, 22567825 - 22568069
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| |||| |||||||| ||||||| |||| ||||| | ||| ||||||| ||||||||| |||||||| ||||||||    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaact 22567924  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    | |||||||||||||||||| ||||||||||||||||| |||||  ||||||||| |  | |||||| ||||||||||||||  |||||||| ||||||     
T  22567925 cacgttacttattttaagttaacgatataaaataaaagggttaagggttagagat-tgtaattttatctgtttgcaacagagtcagttacctagtttggt 22568023  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccccctattt 631  Q
    |||||||||||||||||| || | |||||||||||| |||||||||    
T  22568024 tgcagaaaagtaagcaacggtaatgactctttgaatacccctattt 22568069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 394 - 633
Target Start/End: Original strand, 8241270 - 8241505
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||| | |||| ||||||||||||||| ||||||||||| | || ||| ||||| ||| |||||| || | ||||    
T  8241270 ggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattac 8241367  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    ||||||||  || ||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||| ||  |||||||| |||||| || |||||    
T  8241368 ttattttagtttcacgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacatagcaagttacct-gtttggttgtagaaa 8241466  T
Q  594 agtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||| |||||| |||| |||||||||||||||||||    
T  8241467 agtaagcagcagtta-gactttttgaatccccctatttat 8241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 385 - 632
Target Start/End: Original strand, 21907416 - 21907666
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||| | ||||||||||| | |||||||||||||||| ||| ||     
T  21907416 gtgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaag 21907515  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatc--aatttttatttgtttgcaacagagatagttacct-ggtt 581  Q
    |||||||||||| |||||||||| ||||||||||||||||| |||  |||||| ||  |  ||||||||| ||||||||||||||  ||||| ||   ||    
T  21907516 tcgcgttacttaatttaagttgatgatataaaataaaagagataagggttagaaattacataatttttatctgtttgcaacagagcaagttagctatttt 21907615  T
Q  582 tggctgcagaaaagtaagcaacagttaggactctttgaatccccctattta 632  Q
    ||| |||| ||||| || || | |||| |||||||||||||||| ||||||    
T  21907616 tggttgcaaaaaaggaaacagcggttacgactctttgaatccccttattta 21907666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 426 - 629
Target Start/End: Original strand, 9838381 - 9838584
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagag 525  Q
    |||||||||||||||||||| ||| ||||||| |||||||||| ||| ||  ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9838381 gtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttattttagtttgacgatataaaataaaagag 9838480  T
Q  526 ttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    | ||  |||||||||   ||||||||| ||||||||| ||||  ||||||| | ||||| |||||||||||||||||  ||||||| ||||  |||||||    
T  9838481 tgaagcgttagagattgtaatttttatctgtttgcaaaagagcaagttacccgttttggttgcagaaaagtaagcaatggttaggattcttcaaatcccc 9838580  T
Q  626 ctat 629  Q
    ||||    
T  9838581 ctat 9838584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 386 - 626
Target Start/End: Complemental strand, 28933774 - 28933534
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||| |||||||| | || ||||| ||  ||||||||||||||||||| ||||||||||| | ||||| |||||||||| |||||| |    
T  28933774 tgatggtcggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatt 28933675  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggt-ttgg 584  Q
     | ||| ||||||||||||||| ||||||||||||||||| |||  |||||||||  |||||||||| ||||||||||||||  |||||| || | ||||    
T  28933674 tgtgttgcttattttaagttgatgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacttgttcttgg 28933575  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
     |||| ||||| || || | ||||||||||||||||||||||    
T  28933574 ttgca-aaaaggaaacagcggttaggactctttgaatccccc 28933534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 394 - 629
Target Start/End: Original strand, 15466363 - 15466597
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| || ||||| ||||||||| ||| |||||||| |||||||||||||| ||||||||     
T  15466363 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttag 15466461  T
Q  494 ttattttaagttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    |||||||   || ||||||||| ||||||||||||||  |||||||||  ||| |||||| ||||||||||||||  ||||||||  ||||| |||||||    
T  15466462 ttattttgttttaacgatataataataaaagagttaagggttagagattgcaaattttatctgtttgcaacagagcaagttacct-atttggttgcagaa 15466560  T
Q  593 aagtaagcaacagttaggactctttgaatccccctat 629  Q
    |||||| || | ||||| ||||||  |||||| ||||    
T  15466561 aagtaaacagcggttagaactcttcaaatccctctat 15466597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 386 - 578
Target Start/End: Original strand, 11176935 - 11177127
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||||||||||||  |||||||||||  ||| |||||||||||||||| ||||||||||| |||| |||||||||| || ||| || |    
T  11176935 tgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataatt 11177034  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg 578  Q
    || |||||||||||||| |||||||||||||||||||||| |||  |||||| ||  ||||||||||  |||||||||| ||  |||||||||    
T  11177035 cgtgttacttattttaaattgacgatataaaataaaagagataagggttagaaattgcaatttttataagtttgcaacatagcaagttacctg 11177127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 393 - 598
Target Start/End: Original strand, 4339727 - 4339932
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    |||||||| ||||||||| |||| ||||| ||  ||||||||||||||||||| ||| ||||||| |  ||||||||||| ||| || ||| |||| |||    
T  4339727 tggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcatta 4339826  T
Q  493 cttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    |||||||||  |||||||||||||||||||||| |||  |||||||||  |||| ||||||||||||||||  ||  ||||||||| ||||| |||||||    
T  4339827 cttattttagtttgacgatataaaataaaagagataagggttagagattacaatatttatttgtttgcaactaagcaagttacctgttttggttgcagaa 4339926  T
Q  593 aagtaa 598  Q
    ||||||    
T  4339927 aagtaa 4339932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 394 - 636
Target Start/End: Complemental strand, 27737795 - 27737552
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || ||| | ||||||| |||||||| |||||| |||||||||    
T  27737795 ggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttac 27737696  T
Q  494 ttattt---taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgc 588  Q
    ||||||   ||||||||||  ||||||| |||||  |||  |||||||| |  |||||||||| ||||||||||||||  || ||||||| ||| | |||    
T  27737695 ttatttttgtaagttgacg--ataaaatgaaaga--taagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgttgc 27737600  T
Q  589 agaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    | ||||||||||| | ||||||| |||| |||||| ||  ||||||||    
T  27737599 aaaaaagtaagcagcggttaggattcttcgaatcctccattttatatt 27737552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 417 - 636
Target Start/End: Complemental strand, 6630773 - 6630554
Alignment:
Q  417 gtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaa 516  Q
    |||||||| |||||||  | ||||||||| ||||| ||||| || ||||||||||||||||||||  || |||||||||||||||||||||| |||||||    
T  6630773 gtttaccaagtaataa--taataagtagagtatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattttaagttgacaatataaa 6630676  T
Q  517 ataaaagagttaaaagttagagatatcaattttta-tttgtttgcaacagagatagttacctg-gtttggctgcagaaaagtaagcaacagttaggactc 614  Q
    ||||||||  |||| |||||||||  ||||||||| ||| ||||||||||||  |||||||||  ||||| |||| ||| | ||  | | ||||||||||    
T  6630675 ataaaagatataaaggttagagattgcaatttttattttttttgcaacagagcaagttacctgtttttggttgcaaaaatggaaatagcggttaggactc 6630576  T
Q  615 tttgaatccccctatttatatt 636  Q
    ||||||| ||||||||||||||    
T  6630575 tttgaatacccctatttatatt 6630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 9726007 - 9726120
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| |    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 9726106  T
Q  486 cgcgttacttattt 499  Q
     |||||||||||||    
T  9726107 tgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 394 - 599
Target Start/End: Complemental strand, 21672541 - 21672335
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| || ||||||| |||||| ||| |||||    
T  21672541 ggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttac 21672442  T
Q  494 ttattttaagttgacgatataaaataa-aagagttaaaag-ttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    || |||| ||||||||  ||||||||| |||||||||| | |||||||| | |||||||||| | |||||||| |||  ||||||||| ||| | ||||     
T  21672441 ttttttttagttgacg--ataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttcgttgcat 21672344  T
Q  591 aaaagtaag 599  Q
    |||||||||    
T  21672343 aaaagtaag 21672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 388 - 577
Target Start/End: Complemental strand, 21688907 - 21688718
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| |||||||| ||||||||  |||||||||| | ||||| |||||||||||||| ||| ||||||||| ||||||||||| | || ||| || |||    
T  21688907 atggtcggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcg 21688808  T
Q  488 cgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacct 577  Q
    ||||||||||||| |||||| |||||||||||||||||||| | |||||||||  | |||||||| |||||| || ||||  ||||||||    
T  21688807 cgttacttattttgagttgaagatataaaataaaagagttagaggttagagattgcgatttttatatgtttgtaatagaggaagttacct 21688718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 406 - 623
Target Start/End: Complemental strand, 23645861 - 23645644
Alignment:
Q  406 tgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagtt 505  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |  ||||| |||||||         
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  506 gacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacag 605  Q
     |  | |||||||||||||||| |  |||||||||  |||||||||||||||||||||||||  |||||| || ||||| |||| |||||||||||   |    
T  23645761 aataaaataaaataaaagagttgagggttagagattgcaatttttatttgtttgcaacagagcaagttacatgttttggttgcataaaagtaagcagtgg 23645662  T
Q  606 ttaggactctttgaatcc 623  Q
    |||||  |||||||||||    
T  23645661 ttaggcttctttgaatcc 23645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 402 - 517
Target Start/End: Original strand, 9516786 - 9516904
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt-- 499  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||      
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattttt 9516885  T
Q  500 -taagttgacgatataaaa 517  Q
     ||||||||||||||||||    
T  9516886 gtaagttgacgatataaaa 9516904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 394 - 599
Target Start/End: Complemental strand, 21679957 - 21679751
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||||| ||||||||||| ||||||| || ||||||| |||||| ||| |||||    
T  21679957 ggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttac 21679858  T
Q  494 ttattttaagttgacgatataaaataa-aagagttaaaag-ttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    || |||| ||||||||  ||||||||| |||||||||| | |||||||| | |||||||||| | |||||||| |||  ||||||||| ||| | ||||     
T  21679857 ttttttttagttgacg--ataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttcgttgcat 21679760  T
Q  591 aaaagtaag 599  Q
    |||||||||    
T  21679759 aaaagtaag 21679751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 385 - 621
Target Start/End: Complemental strand, 25927418 - 25927184
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||     
T  25927418 gtgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaat 25927319  T
Q  485 tcgcgttacttattttaagttgacgatataa-aataaaagagttaaaagtt-agagatatcaatttttatttgtttgcaacagagatagttacctggttt 582  Q
    || ||||||||||| |||    || ||| || |||||||||||| |  ||| ||||||  |||||||||| ||||||||| ||||  ||||||||| |||    
T  25927318 tcacgttacttattctaa----acaataaaataataaaagagtttagggttaagagattgcaatttttatctgtttgcaatagagcaagttacctgtttt 25927223  T
Q  583 ggctgcagaaaagtaagcaacagttaggactctttgaat 621  Q
    || | || ||| || || | | ||||||| |||||||||    
T  25927222 ggtttcataaatgttagtagcggttaggattctttgaat 25927184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 394 - 566
Target Start/End: Original strand, 23143715 - 23143886
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||| |||||||  ||||||||||||||||||| |||| |||||| | |||||||||||||||| |||||| ||  |||||    
T  23143715 ggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgttac 23143814  T
Q  494 ttattt--taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacaga 566  Q
    ||||||  ||||||||||||||  |||||||||  |||| |||||||| | ||||||||||| ||||| |||||||    
T  23143815 ttattttgtaagttgacgatat--aataaaaga--taaaggttagagagtttcaatttttatctgtttacaacaga 23143886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 403 - 517
Target Start/End: Complemental strand, 23844562 - 23844445
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt--- 499  Q
    |||||||| ||||||||||||| |||||||| ||||||||||| |||| |||| | | |||||||||||||||| ||||||||||||||||||||||       
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T
Q  500 taagttgacgatataaaa 517  Q
    ||||||||||||||||||    
T  23844462 taagttgacgatataaaa 23844445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 599
Target Start/End: Original strand, 19244569 - 19244772
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||||  |||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| |||  ||||||||||||||| ||||||     
T  19244569 gtgatggtcagattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa- 19244667  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaattttt-atttgtttgcaacagagatagttacctggtttg 583  Q
               |||||||||||| ||||||||||||||||| | |  |||||||||  || ||||| |  ||||||||||||||  ||||||||||||||    
T  19244668 -----------attttaagttgatgatataaaataaaagagatgagggttagagattgcactttttgaactgtttgcaacagagcaagttacctggtttg 19244756  T
Q  584 gctgcagaaaagtaag 599  Q
    | || |||||||||||    
T  19244757 gttgtagaaaagtaag 19244772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 403 - 625
Target Start/End: Complemental strand, 27124589 - 27124369
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt-- 500  Q
    |||||||| ||||||||||||| ||||||||||||||| || | ||||||||| | ||||||||||||||||   |||||| || |||||||||||||      
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttg 27124490  T
Q  501 aagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaag 599  Q
    || |||||||||||||| | ||| ||||||||       |  |||||||||| ||||||||||||||  || |||||||  |||| ||||||||||||||    
T  27124489 aacttgacgatataaaacataagggttaaaag-----acttccaatttttatatgtttgcaacagagcaagtttacctgtcttggttgcagaaaagtaag 27124395  T
Q  600 caacagttaggactctttgaatcccc 625  Q
    || | |||| || |||||||||||||    
T  27124394 cagcggttaagattctttgaatcccc 27124369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 493
Target Start/End: Original strand, 17729145 - 17729244
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |  ||||||||||||||| |||| | |||||||||    
T  17729145 ggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 386 - 636
Target Start/End: Complemental strand, 17827206 - 17826959
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||  ||||||||||| || |||||||  | |||||||||| |||| |||| ||||||||||| ||||||||||||||| || |||||| |    
T  17827206 tgatggttggatatggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaatt 17827107  T
Q  486 cgcgttactta-ttttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttg 583  Q
    ||||||||||| ||||   ||||| |||||||| | ||| ||||||||  ||   |  |||||||||| ||||||||||| ||    |||| ||  ||||    
T  17827106 cgcgttacttattttttttttgacaatataaaagataagggttaaaag--ag---ttgcaatttttatatgtttgcaacatagcagtttacttgtttttg 17827012  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    | |||||||||||||||||| ||||| | ||||||||| ||| | ||||||||    
T  17827011 gttgcagaaaagtaagcaacggttagaattctttgaattcccttgtttatatt 17826959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 532
Target Start/End: Complemental strand, 18075494 - 18075357
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa-ctcgcgtta 492  Q
    |||||||| |||||||| |||| |||||||| |||||||||||||||| ||| |||||||||||  ||||||||||||| ||| |||||| ||    |||    
T  18075494 ggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatctgagttta 18075395  T
Q  493 cttattttaagttgacgatataaaataaaagagttaaaag 532  Q
    |||||||| |||||||   |||||||||||||||||||||    
T  18075394 cttatttttagttgac--aataaaataaaagagttaaaag 18075357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 498
Target Start/End: Complemental strand, 7543074 - 7542962
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||| ||||  |||| |||||||| |||||||||||||||||| | ||||||||| || |||| ||| ||||| || |||||| |    
T  7543074 tgatggtcggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaatt 7542975  T
Q  486 cgcgttacttatt 498  Q
    |||||||||||||    
T  7542974 cgcgttacttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 599
Target Start/End: Complemental strand, 8039243 - 8039037
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||||||| ||||| || ||||||||       |||||||||||| || |||||| |||    
T  8039243 atggtcggattaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat-------gattgtcgtttcatccaaacaattcg 8039152  T
Q  488 cgttacttattttaagttgacgatataa----aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttg 583  Q
     ||||||||||||   ||||||||||||    ||||||||||||||  |||||||||  |||||||||| |||||||||  ||   ||||||||  ||||    
T  8039151 tgttacttattttgt-ttgacgatataataataataaaagagttaagggttagagattgcaatttttatatgtttgcaatcgaacgagttacctattttg 8039053  T
Q  584 gctgcagaaaagtaag 599  Q
    | || |||||||||||    
T  8039052 gttgtagaaaagtaag 8039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 17299919 - 17299832
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||| |||||||||||||||||||| |||||||| |||  |||||||||||| ||| |||||| | |||||||||||||    
T  17299919 aaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 515
Target Start/End: Complemental strand, 22410410 - 22410311
Alignment:
Q  417 gtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta-ttttaagttgacgatataa 515  Q
    |||||||| |||||||| ||||||||||| ||||||||||| | ||||||||||||| |  |||||| || ||||||||| |||||||||||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataa 22410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 500
Target Start/End: Complemental strand, 23232067 - 23231983
Alignment:
Q  416 cgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||| |||||||||||||||||||  |||| |||||||| | ||||||| |||||| |||||| ||||||||||||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttt 23231983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 20005977 - 20005903
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||| | ||||||| ||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtc 20005903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 5624635 - 5624740
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtat-ccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||| ||| | |||  ||||||||||| ||  |||||| | ||||||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttact 5624734  T
Q  495 tatttt 500  Q
    ||||||    
T  5624735 tatttt 5624740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 418 - 499
Target Start/End: Complemental strand, 22566244 - 22566163
Alignment:
Q  418 tttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||| |||||||||||||||||||| |||| |||||| | | ||||||| ||||||||| ||| |||||||||||||||    
T  22566244 tttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 14079548 - 14079491
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgta 453  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 598
Target Start/End: Complemental strand, 9899073 - 9898863
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtg-ataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||| || |||| ||||||||| |||| |||||||| ||||||||||  | ||||||| ||| |||||||   ||||||| |||||||  |||| |     
T  9899073 tgatggtcgggttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccat 9898974  T
Q  485 tcgcgttacttattttaagttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttg 583  Q
    || |||||||||||||   |||| ||||||| ||||||||| ||||| |||  ||||  |||||||||| ||||||||| |||   ||||||||  ||||    
T  9898973 tcacgttacttatttt-gtttgatgatataataataaaagaattaaatgtt--agattgcaatttttatctgtttgcaa-agaacaagttacctattttg 9898878  T
Q  584 gctgcagaaaagtaa 598  Q
    | |||||||||||||    
T  9898877 gttgcagaaaagtaa 9898863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgt 452  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 28586133 - 28586031
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||| ||||| ||| ||||||||||||  |||||||| ||||||||||| |||| |||| | |||||||||||||||  | ||||||  | |||||||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaatccacgttactta 28586034  T
Q  497 ttt 499  Q
    |||    
T  28586033 ttt 28586031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 17382131 - 17382216
Alignment:
Q  387 gatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgttt 472  Q
    |||||| ||||  ||||| |||||||||||||||||||   ||||||||||| |||||| ||||||||| | | ||||||||||||    
T  17382131 gatggtaggatatggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgttt 17382216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 454
Target Start/End: Complemental strand, 20145166 - 20145106
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtat 454  Q
    ||||||||||||||||| |||| ||| |||| |||||||||||||||||||| ||| ||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 22187673 - 22187733
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtat 454  Q
    ||||||||||||||||| |||| ||| |||| |||||||||||||||||||| ||| ||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 473
Target Start/End: Complemental strand, 28589533 - 28589457
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||||||| |||||||||| ||  ||| ||||||||||||| | ||||||| ||| ||||||| |||||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttc 28589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 2586716 - 2586810
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtt 491  Q
    ||||||||||||||| |||| |||||||| ||||| |||||||||||| | ||| | ||||| |  ||||||||||||||| ||| || |||||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat-gcatccaaaatgattgtcgtttcgtccaaaaaattcgcgtt 2586810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 630
Target Start/End: Original strand, 24215618 - 24215705
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
    ||||||||||||||||| ||||||   ||||||||  ||||| |||| ||| || |||  ||||||||| ||||||||||||||||||    
T  24215618 caatttttatttgtttgaaacagaacaagttacctattttggttgcaaaaatgttagcggcagttaggattctttgaatccccctatt 24215705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 496
Target Start/End: Original strand, 24251500 - 24251611
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| | |||| |||||||||  || |||||||||| |||||||||| ||||| |||  |||| ||||| | || ||||||| | ||| ||||||     
T  24251500 gtgatggtcgaattaagcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaat 24251599  T
Q  485 tcgcgttactta 496  Q
    ||||||||||||    
T  24251600 tcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 25781796 - 25781889
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||| |||||||||||   |||||||| |||||| |||||||||||||      | |||||||||||||| |||||| || |||||||||||||    
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat-----ggaattgtcgtttcgtccaaacaattcacgttacttatttt 25781889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 25781919 - 25782002
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  |||| ||||  ||||| ||||||||||||| ||  |||||||| |||| ||||||||    
T  25781919 caatttttatctgtttgcaacagagcaagtttacctattttggttgcagaaaagtaaacagtagttaggattcttcgaatcccc 25782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 31629201 - 31629142
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    ||||||||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||    
T  31629201 aaatcgtttaccaagtaataaaatgataggtagaataatgtattcacatggattgtcgtt 31629142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 17883890 - 17883789
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||| ||||| ||||||||||||| ||||||| ||| | ||||||  |||| ||| | | |||||||| ||||||| |||||| ||| |||||    
T  17883890 ggattagccaaatgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttac 17883792  T
Q  494 tta 496  Q
    |||    
T  17883791 tta 17883789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 22413123 - 22413049
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||| ||||||||| ||||||||| | |||||||||  |||||||  ||||| ||  ||||||||||||    
T  22413123 gtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttt 22413049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 500
Target Start/End: Complemental strand, 24252287 - 24252229
Alignment:
Q  442 tagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||| ||||||||||| |||||||||||||| ||| |||||| ||  ||||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttt 24252229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 625
Target Start/End: Complemental strand, 24657425 - 24657343
Alignment:
Q  544 aatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    ||||||||| ||||||||||||||  | || ||||| ||||| |||||||||||||||| | ||||| | |||| ||||||||    
T  24657425 aatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttagaattcttcgaatcccc 24657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 473
Target Start/End: Complemental strand, 26215459 - 26215414
Alignment:
Q  427 taataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||    
T  26215459 taataaagtg-taagtagagtatcgtatccatatagattgtcgtttc 26215414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 20002497 - 20002440
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagt 442  Q
    |||||||| | | ||||||||||||| |||||  |||||| |||||||||||||||||    
T  20002497 gtgatggtcgaaataggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 599
Target Start/End: Complemental strand, 22813678 - 22813621
Alignment:
Q  543 caatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaag 599  Q
    |||||||||||||||||||||| ||  || ||||||| ||||| ||||||||||||||    
T  22813678 caatttttatttgtttgcaacaaagcaagtttacctgttttggttgcagaaaagtaag 22813621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 34478509 - 34478589
Alignment:
Q  386 tgatggttggattagg-caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattg 466  Q
    ||||||||||||| || ||| | ||| |||||||||||||  |||||||||| |||||||| ||||||||||| | ||||||    
T  34478509 tgatggttggatttgggcaattctaccaaatcgtttaccaaataataaagtg-taagtagagtatcgtatccacaaggattg 34478589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 14637048 - 14637104
Alignment:
Q  580 tttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||| |||||||||||||||| |   ||||| |||| |||||||||||||||||||    
T  14637048 tttggttgcagaaaagtaagcagcgaataggattcttcgaatccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 468
Target Start/End: Complemental strand, 20722278 - 20722209
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtc 468  Q
    |||||||| ||||| ||||||||||||| ||||||||||  |||||||| |||  |||||| | ||||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccacaaggattgtc 20722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 386 - 636
Target Start/End: Complemental strand, 168412 - 168162
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||| |||||| | ||    
T  168412 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagct 168314  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
    || ||||||||||||||||||||||||||||||||||||  |||  ||||||||| ||||||||||| ||||||||||||||  |||||| ||  |||||    
T  168313 cgtgttacttattttaagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttttgg 168214  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
     || ||||||| || |||| ||||||||||||||||||||||| ||||||||    
T  168213 ttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 168162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 128; Significance: 8e-66; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 395 - 633
Target Start/End: Original strand, 722 - 960
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg-cgttac 493  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||| | | |||||||||||||||| ||||||  || ||||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttac 821  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||||  || ||||| |||||| || |||||    
T  822 ttattttaagttgaagatataaaataaaagagttaagggttagagatttcaatttttacctgtttgcaacagagtaagatacct-gtttggttgtagaaa 920  T
Q  594 agtaagcaacagttaggactctttgaatccccctatttat 633  Q
    | |||||| | |||||||||||||||||||||||||||||    
T  921 actaagcagcggttaggactctttgaatccccctatttat 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 7e-63; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 386 - 624
Target Start/End: Complemental strand, 12806004 - 12805766
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| || |||||| |    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatt 12805905  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
     |||||||||||||||||| |||| |||||||||||||| | ||  |||||||||  |||||||||| ||||||||||||||| | ||||||| |||||     
T  12805904 tgcgttacttattttaagtcgacgttataaaataaaagattaaagggttagagattgcaatttttatctgtttgcaacagagaaaattacctgatttggt 12805805  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
    ||||||||||||||||   ||||||| |||| |||||||    
T  12805804 tgcagaaaagtaagcaggggttaggattcttcgaatccc 12805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 394 - 626
Target Start/End: Complemental strand, 21303460 - 21303228
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||| |||||||||  |||||||||||||  ||||||| ||||||||||| ||||||| ||| |  |||||| ||||| || |||||| |  ||||||    
T  21303460 ggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttac 21303361  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    ||||||||||||||| ||||||||||||||||| ||  |||||||||  |||||||||| ||||||||||||||  |||||| || ||||| ||||||||    
T  21303360 ttattttaagttgactatataaaataaaagagtaaagggttagagattgcaatttttatctgtttgcaacagagcaagttacttgttttggttgcagaaa 21303261  T
Q  594 agtaagcaacagttaggactctttgaatccccc 626  Q
    |||||||| | ||||||| | ||||||||||||    
T  21303260 agtaagcagcggttaggattatttgaatccccc 21303228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 394 - 636
Target Start/End: Complemental strand, 16245835 - 16245593
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||||||||| || |||||||||| |||||||||||||||||||| |||| |||||| ||||||| || ||||||| |||||| || ||||||    
T  16245835 ggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttac 16245736  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctg-gtttggctgcaga 591  Q
    ||||||||  |||||   ||||||||||||||||||  ||||||||| | |||||||||| | ||||||||||||  |||||||||  ||||| ||||||    
T  16245735 ttattttagtttgac--aataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcaga 16245638  T
Q  592 aaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||| | ||||| | |||  |||||||||||||||||||    
T  16245637 aaagtaagcagcggttagaattctccgaatccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 599
Target Start/End: Original strand, 21325334 - 21325539
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| |||| |||||||| |||||||| ||||||||| | ||||||||||| |   |||||||||||||| |||||| | | ||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttact 21325433  T
Q  495 tattttaagttgacgatataaaataaaagagtt-aaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    ||||||||||| ||||||||||||||||||||| ||  |||||||||  |||||||||| | ||||||||||||  ||||||||  ||||| ||||||||    
T  21325434 tattttaagttaacgatataaaataaaagagttgaagggttagagattgcaatttttatctatttgcaacagagcaagttacctaatttggttgcagaaa 21325533  T
Q  594 agtaag 599  Q
    ||||||    
T  21325534 agtaag 21325539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 394 - 636
Target Start/End: Original strand, 41508360 - 41508602
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| |||||||||||||||     |||||||||||| ||| |||||| | || ||||    
T  41508360 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattac 41508459  T
Q  494 tta-ttttaagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcaga 591  Q
    ||| |||||| ||||||  ||||||||||||||||||  ||||||||| | |||||| ||| ||||||||||| ||  |||||| || ||||| ||||||    
T  41508460 ttatttttaatttgacg--ataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagttacatgttttggttgcaga 41508557  T
Q  592 aaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||| || | |||| || ||||||||||||||| ||||||||    
T  41508558 aaagtaaccagcggttaagattctttgaatccccctctttatatt 41508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 630
Target Start/End: Original strand, 10744897 - 10745130
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| || | ||| ||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaatt 10744996  T
Q  496 attttaagttgacgata-taaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    |||||||    || | | || |||||||||||| |  || |||||| | |||||||||| | ||||||||||||  ||||||||| ||||| ||||||||    
T  10744997 attttaa---aacaaaattataataaaagagttgagggtaagagatttgcaatttttatctatttgcaacagagcaagttacctgttttggttgcagaaa 10745093  T
Q  594 agtaagcaacagttaggactctttgaatccccctatt 630  Q
     ||||||||||||||  | | || |||||||||||||    
T  10745094 tgtaagcaacagttaaaaattttcgaatccccctatt 10745130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 395 - 636
Target Start/End: Complemental strand, 2167721 - 2167481
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||| ||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||| ||  | |||||||||||| |||||| || | |||||    
T  2167721 gattagacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattact 2167623  T
Q  495 tattttaag-ttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    |||||| || |||||  |||||||||||||||| ||  ||||||||| | |||||||||| ||||||||||| |   ||||||||| ||||| ||  |||    
T  2167622 tatttttagtttgac--tataaaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaagttacctgttttggttgtggaa 2167525  T
Q  593 aagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||| |   ||||||| |||| |||||||||||||||||||    
T  2167524 aagtaagaagtggttaggattcttcgaatccccctatttatatt 2167481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 386 - 626
Target Start/End: Original strand, 8319025 - 8319270
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||| ||| || |||||||||| ||||| |||||||||||||||||| ||||||| | ||||| |||||||||  |||||| |    
T  8319025 tgatggtcagattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaatt 8319123  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatt------tgtttgcaacagagatagttacctgg 579  Q
    |  ||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||  |||||||| ||      |||| |||||| ||  | ||||||      
T  8319124 catgttacttattttaagttgatgatataaaatacaagagataagagttagagattgcaattttttttttcttctgttagcaacatagcaaattacctat 8319223  T
Q  580 tttggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    ||||| |||| |||||||||||   ||||||||||||||||||||||    
T  8319224 tttggttgcataaaagtaagcagtggttaggactctttgaatccccc 8319270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 598
Target Start/End: Complemental strand, 3116522 - 3116321
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||| || ||| ||||||| | |||||||||||||||| |||||| || ||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactt 3116424  T
Q  496 attttaagttgacgatataaaataaaagagttaaaagtt-agagatat-caatttttatttgtttgcaacagagatagttacctgg-tttggctgcagaa 592  Q
    ||||||||||||||  ||||||| |||||| |||  ||| |||||| | |||||||||| ||||||||||||||  || ||||||| ||||| |||||||    
T  3116423 attttaagttgacg--ataaaat-aaagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaagatacctggttttggttgcagaa 3116327  T
Q  593 aagtaa 598  Q
    ||||||    
T  3116326 aagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 396 - 617
Target Start/End: Complemental strand, 18736775 - 18736555
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| | | |  ||||||||||||||||||||||||||||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttactt 18736677  T
Q  496 attttaagttgacgatata--aaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    |||||||    ||  || |   ||||||||||||||  |||||||| | | |||||||||||||||||||| ||   ||||||||| ||||| |||||||    
T  18736676 attttaa---aacagtaaagtgaataaaagagttaagggttagagatttttaatttttatttgtttgcaaccgaacaagttacctgttttggttgcagaa 18736580  T
Q  593 aagtaagcaacagttaggactcttt 617  Q
    || |||||| | ||||||| |||||    
T  18736579 aaataagcagcggttaggattcttt 18736555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 21301911 - 21302017
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||| ||| |||||    
T  21301911 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttac 21302010  T
Q  494 ttatttt 500  Q
    |||||||    
T  21302011 ttatttt 21302017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 10917903 - 10918016
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||| |||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||  |    
T  10917903 tgatggttcgattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagtt 10918002  T
Q  486 cgcgttacttattt 499  Q
    ||| |||| |||||    
T  10918003 cgcattacctattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 380 - 567
Target Start/End: Original strand, 20429689 - 20429876
Alignment:
Q  380 ggagggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaa 479  Q
    ||||| ||||||| |||||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||||| ||| |||||||| |||| || |     
T  20429689 ggaggttgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccac 20429788  T
Q  480 acaactcgcgttactta-ttttaag-ttgacgatataaaataaaagagttaaaagttag-agatatcaatttttatttgtttgcaacagag 567  Q
    |||| |||||||||||| ||||||| ||||||||||  |||||||||| |||  ||||| || |  |||||||||| ||||||||||||||    
T  20429789 acaattcgcgttacttatttttaagtttgacgatat--aataaaagag-taagggttagaagtttgcaatttttatatgtttgcaacagag 20429876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 5508321 - 5508446
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| | ||||||||||||||| ||||| ||| ||| ||||||||||||||||| || |||  |||||| |||||||||||||||||| ||||| ||    
T  5508321 tgatggtcgaattaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatct 5508419  T
Q  486 cgcgttacttattttaagttgacgata 512  Q
    |||||||||||||||||| ||||||||    
T  5508420 cgcgttacttattttaaggtgacgata 5508446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 395 - 626
Target Start/End: Complemental strand, 21825973 - 21825743
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||||| |||||||| ||||||||||||  ||||||||||| |||||||| ||||||||||| ||||||| | |||||||| |||||  ||||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttact 21825875  T
Q  495 tattttaagttgacgatataaaataaaagagttaaaag-ttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    || |||   || || | ||| ||  |||||||| |  | | ||||||  |||||||||| |||||| |||| ||  ||||||||  ||||| ||||||||    
T  21825874 ta-tttggtttaacaaaatataaataaagagttgatggataagagattgcaatttttatctgtttgtaacatagcaagttaccttttttggttgcagaaa 21825776  T
Q  594 agtaagcaacagttaggactctttgaatccccc 626  Q
    |||||| || |||||||||||||||||||||||    
T  21825775 agtaagtaagagttaggactctttgaatccccc 21825743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 400 - 625
Target Start/End: Original strand, 4650231 - 4650450
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| || || ||||||| ||||||||||||| |||| | ||||||||||| | |||||||| ||||| | |||||| ||||||||||||  |    
T  4650231 ggcaagtgtaccaa-tcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttactta--t 4650327  T
Q  500 taagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaa 598  Q
    ||||||||||||| ||||   ||| |||||||   |||  |  |||||||||| |||||||||| |||  || ||||||| ||||| |||||||||||||    
T  4650328 taagttgacgatacaaaagttaagggttaaaa---aga-cttgcaatttttatctgtttgcaacggagcaagtttacctgttttggttgcagaaaagtaa 4650423  T
Q  599 gcaacagttaggactctttgaatcccc 625  Q
    ||||| ||||||| |||| ||||||||    
T  4650424 gcaacggttaggattcttcgaatcccc 4650450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 403 - 642
Target Start/End: Complemental strand, 17438527 - 17438287
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt--- 499  Q
    |||||||| |||||||| |||| || ||||| ||||||||||| |||| |||||| |||||||||||||||||| |||||| || ||||||||||||       
T  17438527 aagtgtaccaaatcgtt-accaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttg 17438429  T
Q  500 taag-ttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagag-atagttacctggtttggctgcagaaaagt 596  Q
    |||| |||||||||||| ||  ||||  ||| ||     || |  |||||||||| |||||||||||||| |   ||||||| ||||| |||||||||||    
T  17438428 taagtttgacgatataataaataaaggtttagaa-----agcttgcaatttttatctgtttgcaacagagcaattttacctgttttggttgcagaaaagt 17438334  T
Q  597 aagcaacagttaggactctttgaatcccc-ctatttatattcttcga 642  Q
    ||||||| ||||||| |||| |||||||| ||||||||||| |||||    
T  17438333 aagcaacggttaggattcttcgaatcccctctatttatattgttcga 17438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 6289888 - 6290001
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||| ||||  ||||||||||||| |||||||||||||||||||| |||| |||||| ||||||| || |||||| || |||| |    
T  6289888 tgatggtcggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtgtagacaatt 6289987  T
Q  486 cgcgttacttattt 499  Q
    ||| ||||||||||    
T  6289988 cgcattacttattt 6290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 821619 - 821515
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||| ||| || ||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||  ||||||    
T  821619 gattaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttact 821520  T
Q  495 tattt 499  Q
    |||||    
T  821519 tattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 22349410 - 22349508
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||| ||  |||||||||||||| |||||| || | |||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttatttt 22349508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 517
Target Start/End: Complemental strand, 19171940 - 19171814
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||| |||  ||| ||| || | |||||||||||||||| |||||| | || ||||    
T  19171940 ggattaggcaagtatactaaattgtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattac 19171841  T
Q  494 ttattt---taagttgacgatataaaa 517  Q
    ||||||   || |||||||||||||||    
T  19171840 ttatttttgtaggttgacgatataaaa 19171814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 12411136 - 12411250
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||| |||||||||||| |||||  |||||| ||||||||||||| |||||| ||||||||||| | |||||||||||||||  |||||| |    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatt 12411235  T
Q  486 cgcgttacttatttt 500  Q
       ||||||||||||    
T  12411236 taggttacttatttt 12411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 13908339 - 13908246
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaa 480  Q
    |||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||||| |||| |||||||| ||||| ||||||| ||||||    
T  13908339 tgatggttggattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatccatagggattatcgtttcatctaaa 13908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 8557203 - 8557130
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||| | |||||||||||||    
T  8557203 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 499
Target Start/End: Complemental strand, 31286128 - 31286017
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| ||||||||| ||||| ||||||| ||||||||||| ||| |||||||||||||||| | ||||||| |||||||| |||||| |    
T  31286128 tgatggtcggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaatt 31286031  T
Q  486 cgcgttacttattt 499  Q
      ||||||||||||    
T  31286030 tccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 625
Target Start/End: Original strand, 17155880 - 17156015
Alignment:
Q  489 gttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgc 588  Q
    |||||||||||||  || ||||||||||| ||||||||||   |||||| ||  |||||||||| ||||||||||||||  ||||||||  ||||| |||    
T  17155880 gttacttattttagtttaacgatataaaaaaaaagagttacgggttagaaattgcaatttttatctgtttgcaacagagcaagttacct-atttggttgc 17155978  T
Q  589 agaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    ||||||||||| | |  |||||||| |||||||||||    
T  17155979 agaaaagtaagtagcgattaggactatttgaatcccc 17156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 616
Target Start/End: Complemental strand, 19925697 - 19925505
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatt----ttaagttgacgatataaaataaa 521  Q
    ||||||| |||||| ||||| ||||||||||| |||||||||| ||||||| ||| || ||||||||||||||    ||||||| ||||||||||||  |    
T  19925697 gtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataaaattta 19925598  T
Q  522 agagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttgg-ctgcagaaaagtaagcaacagttaggactctt 616  Q
    || ||||||    |||||  |  | |||||| ||||||||||||||  || ||||||| |||||  |||||||||||||||| | ||||||| ||||    
T  19925597 agggttaaa----agagacttgcaattttatatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggattctt 19925505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 12754882 - 12754797
Alignment:
Q  542 tcaatttttatttgtttgcaacagagatag-ttacctgg-tttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||| | ||||||| |||| ||||||||    
T  12754882 tcaatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 12754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 397 - 473
Target Start/End: Original strand, 12759383 - 12759459
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||| ||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| | | |||||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttc 12759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 623
Target Start/End: Complemental strand, 2723846 - 2723712
Alignment:
Q  489 gttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatc-aatttttatttgtttgcaacagagatagttacctggtttggctg 587  Q
    |||||||||||||  |||| ||||||||||||| |||||||  |||||| ||  | ||||||||| ||||||||||| ||  |||||||| |||||| ||    
T  2723846 gttacttattttagtttgatgatataaaataaatgagttaagggttagatattgcaaatttttatctgtttgcaacaaagcaagttacct-gtttggttg 2723748  T
Q  588 cagaaaagtaagcaacagttaggactctttgaatcc 623  Q
    || ||||||||||| | |||| |||| |||||||||    
T  2723747 caaaaaagtaagcagcggttaagactatttgaatcc 2723712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 8770149 - 8770232
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||||| |||| ||||||||    
T  8770149 caatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccc 8770232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 495
Target Start/End: Original strand, 28728940 - 28729038
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||   ||||  |||| || |||||||||||||||||||| ||||||||||| || ||||||||||||  | |||||| |||||||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 426 - 630
Target Start/End: Original strand, 8445848 - 8446050
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagag 525  Q
    ||||||||||| |||||||| ||| || |||| |||||||||||||||||| ||| || ||||||||| | ||||      |  | ||||||||||||||    
T  8445848 gtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttcgtccaaa-aattcgcgttacatgtttttgaacaaaaaaataaaataaaagag 8445945  T
Q  526 ttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    ||    |||||||||  ||||||||||  ||||||||||||   ||||||||   |||| |||||||| |||||||   ||||||| |||||||||||||    
T  8445946 tttggggttagagattgcaatttttatcagtttgcaacagaacaagttacctccattggttgcagaaatgtaagcagtggttaggattctttgaatcccc 8446045  T
Q  626 ctatt 630  Q
    |||||    
T  8446046 ctatt 8446050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 18458531 - 18458467
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    |||||||| ||||||||| |||| ||||| || |||||||||||||||||||| |||||||||||    
T  18458531 tggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 18458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 7147973 - 7148059
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||||| ||||||||||| ||||| ||||||||||||| ||| ||||   ||||||||| |||||| |||| |||||||||||||||    
T  7147973 tgatggtcggattaggcaaatgtaccaaatcgtttaccaagtactaaa-aaataagtagagtatcgtctccacatggattgtcgtttc 7148059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 8765247 - 8765330
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| || |||| ||||||||    
T  8765247 caatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttaagattcttcgaatcccc 8765330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 11518075 - 11518004
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    ||||||| | |||| |||||||||| |||||||| | || ||||||||||||||||||||||||| ||||||    
T  11518075 tgatggtcgaattaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatcca 11518004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 500
Target Start/End: Original strand, 19908307 - 19908406
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||| |||||||||||||  ||||||| ||||||||| | ||||||||||| | || | ||||||||||| |||||| || ||| || ||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctatttt 19908406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 471
Target Start/End: Original strand, 20397540 - 20397616
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||||||| || ||||||||||| ||||| | ||||||| ||||| |||||||||||||||||| | |||||||||||    
T  20397540 ggattaggaaaatgtactaaatcatttacaaagtaataa-gtgatcagtagaatatcgtatccacaaggattgtcgtt 20397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 8143609 - 8143711
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    ||||||| |||||||| ||||||||||| | | ||||||||| |||||||| ||| |||||||  | |||| ||||||| || ||||||||||| |||||    
T  8143609 gattaggtaagtgtaccaaatcgtttactaagcaataaagtg-taagtagagtattgtatccacgt-gattctcgtttcatccaaacaactcgctttact 8143706  T
Q  495 tattt 499  Q
    |||||    
T  8143707 tattt 8143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 8770019 - 8770114
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    ||||||||||| || ||||| |||| |||||||||||||||||| | |||| |||||| |||||||||| ||| |||| ||||| ||  ||||||||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttactta 8770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 492
Target Start/End: Original strand, 10923150 - 10923238
Alignment:
Q  404 agtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    ||||||| ||||| ||||||| ||||||||||||||| || | |||||||||||   ||||||| ||||| ||||||||  ||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaacagttcgcgtta 10923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 8143760 - 8143838
Alignment:
Q  547 ttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    |||| |||||||||||||||   ||||||||| ||||| ||||| |||||||||||| ||||||| |||| |||||||||    
T  8143760 ttttttttgtttgcaacagaacaagttacctgttttggttgcag-aaagtaagcaacggttaggattcttggaatccccc 8143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 8765129 - 8765212
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    ||||||| ||||  ||||||||||||||||| | ||||||||||| |||||||||| ||| |||| ||||| ||  ||||||||    
T  8765129 aatcgttaaccaattaataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttactta 8765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 625
Target Start/End: Complemental strand, 20023510 - 20023427
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  | || ||| | ||||| |||||||||||||| | ||||||||| |||||||||||||    
T  20023510 caatttttatctgtttgcaacagagcgaatttaccagttttggttgcagaaaagtaagtagcagttaggattctttgaatcccc 20023427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 7478436 - 7478335
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||| |||||||||||| |||  ||||||||  ||||||||||||     || ||||||||||| || ||||||||||| ||| |||||| || ||||||    
T  7478436 ggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat-----gactatcgtatccacattgattgtcgtttggtccaaacaattcacgttac 7478342  T
Q  494 ttatttt 500  Q
    |||||||    
T  7478341 ttatttt 7478335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 8889226 - 8889152
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| ||| ||||||| | |||||||| ||||||   ||||| || |||||||||||||    
T  8889226 gtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttt 8889152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 601
Target Start/End: Original strand, 932742 - 932943
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||| | |||||||||| | |||||||| |||||| |||| ||||||||||| |  ||||||| ||||||| ||| || || | ||||||||||    
T  932742 ggcaagtgta-tcaatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttattt 932840  T
Q  500 t---aagtt-gacgatataaaa-taaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaa 593  Q
    |   ||||| |||| ||||||| | ||||  |||||||    |  || |||||||||||||||||||||||||  || |||| || ||||| ||||||||    
T  932841 ttataagtttgacgttataaaagttaaaggtttaaaag----actta-caatttttatttgtttgcaacagagcaagtttacttgttttggttgcagaaa 932935  T
Q  594 agtaagca 601  Q
    ||||||||    
T  932936 agtaagca 932943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 467
Target Start/End: Complemental strand, 27543011 - 27542948
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgt 467  Q
    |||||||  ||||||||||||| | |||||||| ||||||||| ||||||||||| ||| |||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccacatgaattgt 27542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 5e-61; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 394 - 601
Target Start/End: Original strand, 14528142 - 14528349
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||||||||||| ||||||||| ||||||    
T  14528142 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttac 14528241  T
Q  494 ttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaa 593  Q
    |||||||||  |||||||||||||||||| ||||||  |||||||||  |||||||||  ||||||||||| ||  ||||||||||||||| ||||||||    
T  14528242 ttattttaaactgacgatataaaataaaatagttaagggttagagattgcaatttttagctgtttgcaacaaagcaagttacctggtttggttgcagaaa 14528341  T
Q  594 agtaagca 601  Q
    ||||||||    
T  14528342 agtaagca 14528349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 386 - 630
Target Start/End: Original strand, 34497100 - 34497345
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||| ||  ||||||||||||| ||||||||||||| |||||| |||||||||||||  || |||||||||||| ||||||      
T  34497100 tgatggtcagattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatc 34497199  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaa-agttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    | ||||||||||||||| |||||||||||||||||||||||||||  |||||||||  |||||||||| | ||||||||| ||   |||||||||||||     
T  34497200 cacgttacttattttaaattgacgatataaaataaaagagttaaagggttagagattgcaatttttatctttttgcaacatagcatgttacctggtttgc 34497299  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatt 630  Q
     |||||||||||||||| | ||||||| || |||||||||||||||    
T  34497300 ttgcagaaaagtaagcagcggttaggattccttgaatccccctatt 34497345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 386 - 627
Target Start/End: Original strand, 19786716 - 19786958
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| ||||| ||| ||||||||||||| |||||||||||| ||||| | |||| |||||||| ||| |||||||||||| ||||||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaact 19786815  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
    || ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||   ||||||||| ||||||||||||||  |||||| ||  ||||     
T  19786816 cgtgttacttgttttaagttgatgatataaaataaaagagataaaagttagagattgtaatttttatctgtttgcaacagagcaagttacatgtttttga 19786915  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccct 627  Q
     || ||||||| || |||  ||||||||||||||||| |||||    
T  19786916 ttgtagaaaaggaaacaatggttaggactctttgaattcccct 19786958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 386 - 626
Target Start/End: Complemental strand, 25182542 - 25182301
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| |||||| || ||||  |||||||  ||||||||||| ||||||| |||||||| || |||||||||| ||||||||||||  ||    
T  25182542 tgatggtcggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgct 25182443  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
     ||||||||||||||||||||||||||||||||||||||| |||  |||||||||  |||||||||| | ||||||||||||  |||||||||  |||||    
T  25182442 tgcgttacttattttaagttgacgatataaaataaaagagataagggttagagattgcaatttttatctatttgcaacagagcaagttacctgtttttgg 25182343  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
     |||||||||| || ||   ||||||||||||||||||||||    
T  25182342 ttgcagaaaaggaaacagtggttaggactctttgaatccccc 25182301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 385 - 633
Target Start/End: Original strand, 13697846 - 13698086
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| | ||||||||||||||| |||||||||||||  |||||||||       ||| ||||||||||| | ||||| |||||||||| |||||||    
T  13697846 gtgatggtcgaattaggcaagtgtaccaaatcgtttaccaattaataaagt-------agagtatcgtatccacaaggattttcgtttcgtccaaacaac 13697938  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
      ||||||||||||||||||||||||||||||||| ||||| |||  |||||||||  |||||||||| | ||||||||||||  |||||||| ||||||    
T  13697939 ctgcgttacttattttaagttgacgatataaaatacaagagataagggttagagattgcaatttttatctctttgcaacagagcaagttacct-gtttgg 13698037  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
     ||||||||||||||||    ||| ||||||||||||||||||||||||    
T  13698038 ttgcagaaaagtaagcagtgattatgactctttgaatccccctatttat 13698086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 386 - 622
Target Start/End: Complemental strand, 30806611 - 30806379
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccat-----atggattgtcgtttcgtctaaa 480  Q
    ||||||| ||||||||||||||||  ||||||||||  | |||||||||||||||||||| |||||||||||      | ||||||||||||| || |||    
T  30806611 tgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaa 30806512  T
Q  481 caactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggt 580  Q
    ||| | |||||||||||||||  ||||||||||||||||||||||||||  |||||||||  |||||||||| |||        |||| |||| ||| ||    
T  30806511 caatttgcgttacttattttagtttgacgatataaaataaaagagttaagggttagagattgcaatttttatctgt--------gagaaagttgcct-gt 30806421  T
Q  581 ttggctgcagaaaagtaagcaacagttaggactctttgaatc 622  Q
    |||| |||||||||||||||| |||||| |||||||||||||    
T  30806420 ttggttgcagaaaagtaagcagcagttatgactctttgaatc 30806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 394 - 636
Target Start/End: Complemental strand, 24114388 - 24114146
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||| |||||||| |||||||| ||||||||||| ||||||||||  | |||||||||||||||| |||||||| |||||||    
T  24114388 ggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttac 24114289  T
Q  494 ttattt---taagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgca 589  Q
    ||||||   |||||||||||||||||| | ||| ||||     || || |  |||||||||| |||||||| |||||  || ||||||| |||||   |     
T  24114288 ttatttttgtaagttgacgatataaaagataagggtta-----taaaggttgcaatttttatctgtttgcagcagagcaagtttacctgttttggtatct 24114194  T
Q  590 gaaaagtaagcaacagttaggactctttgaat-ccccctatttatatt 636  Q
    |||||||||||| | ||||||| |||| |||| |||||||||||||||    
T  24114193 gaaaagtaagcagcggttaggattcttcgaatcccccctatttatatt 24114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 636
Target Start/End: Complemental strand, 13315097 - 13314856
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||| |||||||| | ||| ||||||| |||||||||||||||||| | ||||||||||| ||||||| | |||||||| |||||| |||||||||    
T  13315097 ggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttac 13314999  T
Q  494 ttattt--taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacag-agatagttacctg-gtttggctgc 588  Q
    ||||||  ||||||||||||||  |||||||||  |||| |||||||| |  |||||||||| |||||||||| | | | | |||||||  ||||| |||    
T  13314998 ttattttataagttgacgatat--aataaaaga--taaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgc 13314903  T
Q  589 agaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||||||||||| |||| || |||| |||| ||||||||||||||    
T  13314902 agaaaagtaagcaacggttaagattcttcgaat-cccctatttatatt 13314856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 29382468 - 29382361
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||| || |||||| | ||||||    
T  29382468 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgtta 29382369  T
Q  493 cttatttt 500  Q
    ||||||||    
T  29382368 cttatttt 29382361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 505
Target Start/End: Original strand, 6884941 - 6885061
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||| |||| ||||||||||||||||||||||||| ||||  ||||||||||||||||| || ||||||||| | |||||||||||||||||| ||||||    
T  6884941 ggtggtggtcggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaa 6885039  T
Q  484 ctcgcgttacttattttaagtt 505  Q
    || ||| |||||||||||||||    
T  6885040 cttgcgctacttattttaagtt 6885061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 2637609 - 2637699
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaa 502  Q
    |||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2637609 aaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttattttaa 2637699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 498
Target Start/End: Original strand, 15238784 - 15238896
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| | ||||||||||||||  |||| |||||||| |||| ||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||| |    
T  15238784 tgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaatt 15238883  T
Q  486 cgcgttacttatt 498  Q
    |||||||||||||    
T  15238884 cgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 5850926 - 5851039
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| |||||||||  |||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||  | ||||||      
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatc 5851025  T
Q  486 cgcgttacttattt 499  Q
    || |||||||||||    
T  5851026 cgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 483
Target Start/End: Complemental strand, 17102009 - 17101910
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    ||||||||| ||||  || |||||||  ||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||    
T  17102009 ggtgatggtcggatatggaaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaa 17101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 499
Target Start/End: Original strand, 24904630 - 24904731
Alignment:
Q  398 taggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttat 497  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||||||| |||| |||||| |  |||||||||||||||||||||| || | ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttat 24904729  T
Q  498 tt 499  Q
    ||    
T  24904730 tt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 633
Target Start/End: Original strand, 7983723 - 7983813
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||||| ||||||| ||| ||  |||| |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||    
T  7983723 caatttttatctgtttgcgacatagcaagttgcctggtttggttgcagaaaagtaagcaacgggtaggattctttgaatccccctatttat 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 14075578 - 14075692
Alignment:
Q  386 tgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||||||||| ||| || ||||| ||||| ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||  | ||||||     
T  14075578 tgatggttggatttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaat 14075677  T
Q  485 tcgcgttacttattt 499  Q
      |||||||||||||    
T  14075678 gtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 395 - 626
Target Start/End: Original strand, 24269592 - 24269822
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| ||||  ||||||| ||||||||||| |||||||| ||||||||||| | |||||||||||||||| |||||| || | ||| |    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatt 24269690  T
Q  495 tattt---taag-ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgc 588  Q
    |||||   |||| |||||| ||||||| | |||||||  ||  |||   |  |||| ||||| |||||||||||||| ||| |||||||  ||||| |||    
T  24269691 tatttttgtaagtttgacggtataaaaaataagagtttgaa--tag---ttgcaatctttatctgtttgcaacagag-tagtttacctgtttttggttgc 24269784  T
Q  589 agaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    ||||||||||||| | ||||||| |||| |||||||||    
T  24269785 agaaaagtaagcagcggttaggattcttcgaatccccc 24269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 30235361 - 30235419
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagta 443  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  30235361 gtgatggttggattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 17976612 - 17976717
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||| | ||||| |||| || |||||||||||||||||||| ||||||||||| |  |||| |||||||||||| |||  |||| ||||    
T  17976612 ggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattac 17976711  T
Q  494 ttattt 499  Q
    ||||||    
T  17976712 ttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 403 - 517
Target Start/End: Complemental strand, 18448639 - 18448522
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt--- 499  Q
    |||||||| ||||| ||||||| |||||||||| |||| ||||  |||||||| |||  ||||||||||| ||| |||||| || ||||||||||||       
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T
Q  500 taagttgacgatataaaa 517  Q
    ||||||||||||||||||    
T  18448539 taagttgacgatataaaa 18448522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 499
Target Start/End: Complemental strand, 5053036 - 5052923
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||||  |||||||||||||||| ||||||||||||  ||||||||||| |||||||| ||| ||||||| ||| ||| | ||| |||||||||||     
T  5053036 gtgatggtcagattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccacatgaatt-ttgttgcgtctaaacaat 5052938  T
Q  485 tcgcgttacttattt 499  Q
    || || |||||||||    
T  5052937 tcacgctacttattt 5052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 386 - 508
Target Start/End: Complemental strand, 28276871 - 28276750
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||  |||||||||||||  ||| |||||||||||| || ||||||||||||| ||||| | |||| ||| ||| ||||    
T  28276871 tgatggtcggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttttgtccaaataact 28276773  T
Q  486 cgcgttacttattttaagttgac 508  Q
    |   |||||||||| ||||||||    
T  28276772 cctcttacttatttgaagttgac 28276750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 17509258 - 17509365
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt---taagttgacg 509  Q
    ||||||| |||| |||||||||||||||||||| |||| |||||| |||||||||  ||||||| |||||| || | ||||||||||   ||||||||||    
T  17509258 aatcgttaaccaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataagttgacg 17509357  T
Q  510 atataaaa 517  Q
     |||||||    
T  17509358 gtataaaa 17509365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 30122260 - 30122156
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||||  || ||| ||||||||||| |||||||| |||| |||||| |||||||||| ||| ||| |||||| |||| ||||    
T  30122260 ggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattac 30122162  T
Q  494 ttattt 499  Q
    ||||||    
T  30122161 ttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 572 - 636
Target Start/End: Complemental strand, 26394626 - 26394562
Alignment:
Q  572 ttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    ||||||| ||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  26394626 ttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 517
Target Start/End: Original strand, 27659470 - 27659564
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt---taagttgacgatataaaa 517  Q
    |||||||||||||||||||| ||||||||| | | |||||||||||||||| |||||   || |||||||||||   ||||||||||||||||||    
T  27659470 gtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttgacgatataaaa 27659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 406 - 469
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  406 tgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcg 469  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 473
Target Start/End: Original strand, 31288339 - 31288429
Alignment:
Q  383 gggtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    |||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||||| |||||| | ||||||||||||| |||||||| ||||    
T  31288339 gggtgatggtcggatttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttc 31288429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 26008019 - 26008121
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||| ||| ||||| | | |||||||| || |  ||| | || ||||||||||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtcattccaactagaaaattcgcgttactta 26008118  T
Q  497 ttt 499  Q
    |||    
T  26008119 ttt 26008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 44011116 - 44011048
Alignment:
Q  407 gtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    |||| ||||||||||| | ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtc 44011048  T

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Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 25226137 - 25226235
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| || ||||||||||||||||| || ||||||||  | | ||||| | ||||| || |||||| | ||||||| ||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatatttt 25226235  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 537
Target Start/End: Original strand, 21314610 - 21314757
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| || ||||||||||||| ||| || || |||| |||||||||||||||||||  ||||||||| | | ||||| |||||||||  ||||||      
T  21314610 tgatggtcgggttaggcaagtgtaataa-tcatt-accaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaata 21314707  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttaga 537  Q
    | ||||||||||||| ||||  | ||||  |||| |||||||||| ||||||    
T  21314708 ctcgttacttatttttagttaccaatat--aatagaagagttaaaggttaga 21314757  T

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Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 16404042 - 16404125
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||||||||||||||||||  | || ||||  ||||||||||||||| |||||| | ||||||| |||| ||||||||    
T  16404042 caatttttatttgtttgcaacagagcgaatttacctattttggctgcagaaaaataagcagcggttaggattcttcgaatcccc 16404125  T

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Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 24110761 - 24110698
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    |||||| |||||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  24110761 ggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatcca 24110698  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 473
Target Start/End: Complemental strand, 26615339 - 26615269
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||||||  |||||||| ||||  ||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  26615339 caagtgtatcaaatcgtt-accaactaataaagtgataagtagagtattgtatccatatgaattgtcgtttc 26615269  T

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Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 633
Target Start/End: Complemental strand, 30122111 - 30122020
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaa-tccccctatttat 633  Q
    |||||||||| |||||| |||||||  ||||||||  ||||| ||||||||||||||||   ||||  |||||||||| |||||||||||||    
T  30122111 caatttttatctgtttgtaacagagtaagttacctattttggttgcagaaaagtaagcagtggttataactctttgaattccccctatttat 30122020  T

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Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 24644823 - 24644935
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  ||||| |||||||| | ||||  ||||||| ||||||||||| |||||||| ||| ||||||| ||||||| ||||||  || ||| || |    
T  24644823 tgatggtcagattatgcaagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataatt 24644921  T
Q  486 cgcgttacttattt 499  Q
    ||| ||||||||||    
T  24644922 cgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 636
Target Start/End: Complemental strand, 18448496 - 18448404
Alignment:
Q  546 tttttatttgtttgcaacagagatagttacctggttt-ggctgcagaaaagtaagcaacagttaggactctttgaatccc-cctatttatatt 636  Q
    ||||||| ||||||||||||||  ||||||||| ||| || |||| ||||||||||||| |||| || |||||| ||||| ||||| ||||||    
T  18448496 tttttatctgtttgcaacagagcaagttacctgtttttggttgcataaaagtaagcaacggttatgattctttgtatccctcctatatatatt 18448404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 624
Target Start/End: Complemental strand, 23893171 - 23893089
Alignment:
Q  543 caatttttatttgtttgcaacagag-atagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
    |||||||||| ||||||||||| || | | ||||||| ||||| |||||||||||||  |  |||||||| ||||||||||||    
T  23893171 caatttttatctgtttgcaacaaagcaaatttacctgttttggttgcagaaaagtaactagtagttaggattctttgaatccc 23893089  T

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Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 24119871 - 24119798
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||| ||||||| | ||||||||||||| || |||||||| |||||||| ||| ||||||| ||||||| |||||    
T  24119871 ttagacaagtgtgccaaatcgtttaccaagttataaagtg-taagtagagtattgtatccacatggattttcgtt 24119798  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 14628371 - 14628431
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcc 456  Q
    ||||||||||| ||| ||||| ||||||| |||||||  ||||||||| ||||| ||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaaatattgtatcc 14628431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 118; Significance: 7e-60; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 394 - 626
Target Start/End: Original strand, 39577 - 39810
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa-ctcgcgtta 492  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||  |||||||||| || |||||| |||| ||| ||| || ||| | |||    
T  39577 ggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcacttta 39676  T
Q  493 cttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaa 592  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||  |||||||||| ||||||||||||||  ||||||||| ||||| |||||||    
T  39677 cttattttaagttgacgatataaaataaaagagataagaattagagattgcaatttttatctgtttgcaacagagcaagttacctgttttggttgcagaa 39776  T
Q  593 aagtaagcaacagttaggactctttgaatccccc 626  Q
    ||||||||| | |||| |||||||||||||||||    
T  39777 aagtaagcagcggttatgactctttgaatccccc 39810  T

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Target: scaffold0008 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 386 - 636
Target Start/End: Original strand, 54845 - 55097
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcg-tttcgtctaaacaac 484  Q
    ||||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||| | |    
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagc 54944  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttg 583  Q
    | ||||||||||||||||||| |||||||||||||||| || |||  |||||||||  |||||||||||||||||| ||| ||  |||||||||  ||||    
T  54945 ttgcgttacttattttaagttaacgatataaaataaaaaagataagggttagagattccaatttttatttgtttgcgacatagcaagttacctgtttttg 55044  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    | |||| ||||| || ||   ||||||||||||||||||||||||||||||||    
T  55045 gttgcacaaaagaaaacactggttaggactctttgaatccccctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 385 - 532
Target Start/End: Complemental strand, 48305 - 48158
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||  ||||| ||||  ||||||||||||| |||||||||||||||||||| |||||||||  |||||||||||  |||||| ||||||     
T  48305 gtgatggtcggatatggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaat 48208  T
Q  485 tcgcgttacttattt---taagttgacgatataaaataaaagagttaaaag 532  Q
    || | ||||||||||   |||||||||||| ||||| | ||| ||||||||    
T  48207 tctc-ttacttatttttgtaagttgacgatgtaaaagataagggttaaaag 48158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 3e-59; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 396 - 623
Target Start/End: Original strand, 22664201 - 22664429
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||| ||||||   ||||| || |||||||||||||||||||||| |||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctt 22664300  T
Q  496 attttaagttgacgatataaaataaaagagttaaaagttag-agatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaa 594  Q
    |||||||||||||||||||||||||||||| |||  ||||| | ||  ||||||||||||||||| |||||||  |||||| || ||||| |||||||||    
T  22664301 attttaagttgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaagttacatgttttggttgcagaaaa 22664400  T
Q  595 gtaagcaacagttaggactctttgaatcc 623  Q
    ||||| | | |||||||||||||||||||    
T  22664401 gtaagtagcggttaggactctttgaatcc 22664429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 386 - 633
Target Start/End: Original strand, 33190662 - 33190909
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||| || |||||| |||||||||| || |||||||| ||||||||||| |||  |||||| |   ||||||||||| |||||||||||    
T  33190662 tgatggtcggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaact 33190761  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    || |||||||||||||||||||||||||||||||||| ||||||   ||||||||   |||||||||||||||||||||| |  ||||||||||||||      
T  33190762 cgtgttacttattttaagttgacgatataaaataaaatagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagttacctggtttgat 33190861  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||||||||||| | ||||||| |||||| ||||| ||||||||    
T  33190862 tgcagaaaagtaagcagcggttaggattctttggatccctctatttat 33190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 396 - 633
Target Start/End: Original strand, 24281272 - 24281507
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||| |||||| ||||||| ||||||  ||  ||||| | |||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactt 24281371  T
Q  496 attttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaag 595  Q
    ||||||||||||| ||||||||||||||||| ||  |||||||||  |||||| ||| |||||| |||||||| |||||| | |||||| || |||||||    
T  24281372 attttaagttgacaatataaaataaaagagtaaagggttagagattgcaatttctatctgtttgaaacagagaaagttacat-gtttggttgtagaaaag 24281470  T
Q  596 taagcaacagttaggactctttgaatccccctatttat 633  Q
    || ||| |||||||||| ||||||| ||||||||||||    
T  24281471 tatgcagcagttaggacactttgaa-ccccctatttat 24281507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 400 - 636
Target Start/End: Original strand, 12208600 - 12208838
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T
Q  500 ---taagttgacgatataaa--ataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaa 593  Q
       |||||||||||||||||  ||||||| |||| ||     || | ||| |||| || ||||||||||||||  || ||||||| ||| ||||||||||    
T  12208700 ttgtaagttgacgatataaaagataaaagggttagaa-----aggtttcagttttaatctgtttgcaacagagcaagtttacctgttttagctgcagaaa 12208794  T
Q  594 agtaagcaacagttaggactctttgaat-ccccctatttatatt 636  Q
    |||||||| | ||||||| |||| |||| |||||||||||||||    
T  12208795 agtaagcagcggttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 385 - 636
Target Start/End: Complemental strand, 9787994 - 9787742
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||| | ||||||||||||||||| ||||| |||| || |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  9787994 gtgatgatcggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaac 9787895  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttg 583  Q
    ||   |||||||||||||||| | ||||||||||| |||||  ||  |||||||||  ||||||| |  ||||||||||||||  ||| |||||  ||||    
T  9787894 tccaattacttattttaagtttatgatataaaatagaagagaaaagggttagagattgcaattttgaactgtttgcaacagagcaagtgacctgtttttg 9787795  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    | ||||||||||||||   | ||||| ||||||||||||||| ||| ||||||    
T  9787794 gttgcagaaaagtaagttgcggttagaactctttgaatccccatatatatatt 9787742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 386 - 505
Target Start/End: Complemental strand, 23038125 - 23038007
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||    
T  23038125 tgatggttggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaact 23038027  T
Q  486 cgcgttacttattttaagtt 505  Q
    | ||||||||||||||||||    
T  23038026 ctcgttacttattttaagtt 23038007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 415 - 633
Target Start/End: Original strand, 24214558 - 24214770
Alignment:
Q  415 tcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatata 514  Q
    |||||||||| |||||||||||||||||| | ||  ||||||| ||||||||| |||||||||||||||||  ||||||||||||||||| |||||||||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttattttaagtggacgatata 24214657  T
Q  515 aaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactc 614  Q
    |||||||||| ||||  ||| || ||   ||||||||| ||||      ||    ||||||||||||||| ||||||||| |||| | | ||||||||||    
T  24214658 aaataaaagaattaagggtttgaaattggaatttttatctgtt------aggccaagttacctggtttggttgcagaaaaataagtagcggttaggactc 24214751  T
Q  615 tttgaatccccctatttat 633  Q
    |||||||||||||||||||    
T  24214752 tttgaatccccctatttat 24214770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 386 - 633
Target Start/End: Complemental strand, 12012914 - 12012680
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||||||||||||||  |||||||||| || ||| |||||||||||||||| ||| ||||||| ||| ||||||||||  ||||||| | |    
T  12012914 tgatggttggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactatt 12012815  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    ||||||||||||            ||| | ||||||||||||||  |||||||||  |||||||||||||||||||||| ||  ||||||||| |||||     
T  12012814 cgcgttacttat------------ata-ataataaaagagttaagggttagagattgcaatttttatttgtttgcaacatagcgagttacctgttttggt 12012728  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||| |||||||| ||||  |||||| |||| ||||||||||||||||    
T  12012727 tgcacaaaagtaaacaacgattaggattcttcgaatccccctatttat 12012680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 390 - 567
Target Start/End: Original strand, 147620 - 147795
Alignment:
Q  390 ggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcg 489  Q
    |||| |||||| ||||||||  |||||||||  || ||||||||||||||||| || |||| ||| || |||||||||| ||||||||||||| ||||||    
T  147620 ggttagattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcg 147719  T
Q  490 ttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagag 567  Q
    ||||||||||||| |||||||||| ||||||||||| |||  ||||||||| |||| |||||| | ||||||||||||    
T  147720 ttacttattttaatttgacgatat-aaataaaagagataagggttagagatttcaa-ttttatctatttgcaacagag 147795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 564
Target Start/End: Complemental strand, 51473978 - 51473812
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    |||||| || ||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| | |||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttactt 51473881  T
Q  496 attttaagttgacgatataaaataaaagagttaaaa-gttagagatat-caatttttatttgtttgcaaca 564  Q
     |||| ||| |||   |||||||||||||||||||| ||||||||| | |||||||||| |||||||||||    
T  51473880 gtttttagtcgac--aataaaataaaagagttaaaaggttagagatttgcaatttttatctgtttgcaaca 51473812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 393 - 636
Target Start/End: Complemental strand, 13345443 - 13345200
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||| |||||| ||||||||    
T  13345443 tggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 13345344  T
Q  493 cttattt-taagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    ||||||| ||  ||||||  ||||||||||||||||||| |||| |||| | || ||||||| | |||  |||| ||  ||||||||| ||||| |  ||    
T  13345343 cttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcagtttttatctatttaaaacatag-cagttacctgttttggtttaag 13345247  T
Q  591 aaaagtaagcaacagttaggactctttgaat-ccccctatttatatt 636  Q
    |||||||| || | ||||||| | || |||| |||||||||||||||    
T  13345246 aaaagtaaacagcggttaggatttttcgaatcccccctatttatatt 13345200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 15813268 - 15813143
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||| | ||||| ||||| |||| ||||||||    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaact 15813170  T
Q  486 cgcgttacttattttaagttgacgata 512  Q
    | ||||||||||||||| |||||||||    
T  15813169 ctcgttacttattttaatttgacgata 15813143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 633
Target Start/End: Original strand, 28008116 - 28008338
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgat 511  Q
    ||||||||||| | |||||||||| ||||| | | |||||||| |||  | |||||||| |  | || |||| ||| |||||||||||||||||||||||    
T  28008116 aaatcgtttactaagtaataaagttataagaatagtatcgtattcattggaattgtcgtcttctttatacaattcgtgttacttattttaagttgacgat 28008215  T
Q  512 ataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttagga 611  Q
    ||||||||||||||| ||   ||||||||  |||||||||| ||||| ||| ||||  | |||| || ||||| |||||||||||||||| | |||||||    
T  28008216 ataaaataaaagagtaaaggattagagattgcaatttttatctgtttccaatagagcaaattacttgttttggttgcagaaaagtaagcagcggttagga 28008315  T
Q  612 ctctttgaatc-cccctatttat 633  Q
     |||||||||| |||||||||||    
T  28008316 ttctttgaatctcccctatttat 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 627
Target Start/End: Complemental strand, 15544066 - 15543839
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta--- 496  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||     |||||||||||||| |||||| ||| ||||||||       
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  497 ttttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgcagaaaa 594  Q
    |||||| |||||||||||||| | ||| ||||||||  ||   |  |||||||||||||||||||||| ||  || |||||||  ||| | |||||||||    
T  15543966 ttttaatttgacgatataaaagataagggttaaaag--ag---ttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaa 15543872  T
Q  595 gtaagcaacagttaggactctttgaatccccct 627  Q
    ||||||||| ||||||| |||| ||||||||||    
T  15543871 gtaagcaacggttaggattcttcgaatccccct 15543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 385 - 626
Target Start/End: Complemental strand, 17610371 - 17610129
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||  | ||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||     
T  17610371 gtgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaat 17610272  T
Q  485 tcgcgttacttattt---taag-ttgacgatataaaataaaagagttaaaagttag--agatatcaatttttatttgtttgcaacagagatag-ttacct 577  Q
    || ||||||||||||   |||| |||||||||||||       ||||||| |||||  || |   ||||||||| ||||||||||||||  || ||||||    
T  17610271 tcacgttacttatttttgtaagtttgacgatataaa-------agttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacct 17610179  T
Q  578 g-gtttggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    |  ||||| |||||||||||||||| | ||||||| |||||||| |||||    
T  17610178 gtttttggttgcagaaaagtaagcagcggttaggattctttgaaaccccc 17610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 474 - 633
Target Start/End: Complemental strand, 15808046 - 15807886
Alignment:
Q  474 gtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagtt 573  Q
    ||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||  ||||  |||  |||||||||||||||||||||||||  ||||    
T  15808046 gtctaaacaactcgcattacttattttagtttgaagatataaaataaaagagttaatggttaaggattgcaatttttatttgtttgcaacagagcaagtt 15807947  T
Q  574 acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc-ctatttat 633  Q
    ||| | ||||| || |||||| |||||| |  |||||| ||||||||||||| ||||||||    
T  15807946 accagttttggttgtagaaaaataagcagcgattaggattctttgaatccccactatttat 15807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 499
Target Start/End: Complemental strand, 3591768 - 3591654
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||||||||||||||||| |||||||||| || ||||||||||||||| |||| ||||||||||| || ||||||||||| ||| ||||||     
T  3591768 gtgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaat 3591669  T
Q  485 tcgcgttacttattt 499  Q
    |||| ||||||||||    
T  3591668 tcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 17359155 - 17359277
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||| ||||||||  ||||||||||||||| ||| || || ||||||    
T  17359155 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttac 17359254  T
Q  494 tta-ttttaagttgacgatataa 515  Q
    ||| ||||| |||||||||||||    
T  17359255 ttatttttaggttgacgatataa 17359277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 386 - 499
Target Start/End: Original strand, 17837502 - 17837615
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| |||| |||||||| |||||||||| ||||||||| |||| |||||| | |||||||| ||| |||||||||| |    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaatt 17837601  T
Q  486 cgcgttacttattt 499  Q
    ||||||||||||||    
T  17837602 cgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 392 - 636
Target Start/End: Original strand, 9401500 - 9401742
Alignment:
Q  392 ttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtt 491  Q
    |||||||||||| |||||| |||| |||||||| ||||||||||   ||||||| ||||||||||| ||| |||||||||||||| |||||| |||||||    
T  9401500 ttggattaggca-gtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgtt 9401595  T
Q  492 acttattt---taagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatag-ttacctggtttggct 586  Q
    ||||||||   |||||||  |||||  |||||||||  |||  |||||||| |  |||||||||| ||||||||||||||  || ||||||| ||||| |    
T  9401596 acttatttttgtaagttgttgatat--aataaaaga--taacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctgttttggtt 9401691  T
Q  587 gcagaaaagtaagcaacagttaggactctttgaatcccc-ctatttatatt 636  Q
     || ||||||||| | | ||||||| |||| |||||||| |||||||||||    
T  9401692 acaaaaaagtaagtagcggttaggattcttcgaatcccctctatttatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 517
Target Start/End: Original strand, 29242504 - 29242638
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  ||||||||||| |||| ||||| || |||||||||||||||||||| |||||||||||||  |||||||||||| || |||||| |    
T  29242504 tgatggtcggatatggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaatt 29242603  T
Q  486 cgcgttacttattt---taagttgacgatataaaa 517  Q
    |||||||| |||||   ||||||||||||||||||    
T  29242604 cgcgttacatatttttgtaagttgacgatataaaa 29242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 491 - 633
Target Start/End: Complemental strand, 18101022 - 18100880
Alignment:
Q  491 tacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    |||||||||||| |||||||||||||||| |||||||||  |||||| ||  |||||||||| ||||||||||| ||  |||||| || ||||| |||||    
T  18101022 tacttattttaatttgacgatataaaatagaagagttaagggttagaaattgcaatttttatctgtttgcaacatagcaagttacatgttttggttgcag 18100923  T
Q  591 aaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    ||||||||||| | |||| || | ||||||||||| |||||||    
T  18100922 aaaagtaagcagcggttatgattatttgaatccccgtatttat 18100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 415 - 625
Target Start/End: Complemental strand, 21666693 - 21666483
Alignment:
Q  415 tcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt---taagttgacgat 511  Q
    ||||| |||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||| || ||||||||||||   ||||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgat 21666594  T
Q  512 ataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaagcaacagttagg 610  Q
    |||||| | ||| |||||||   |||  ||  ||||||||| ||||||||| | |   || ||||||| ||||| || ||||||||||||||  ||||||    
T  21666593 ataaaagataagggttaaaa---aga-ctagtaatttttatctgtttgcaagacaacaagtttacctgttttggttgtagaaaagtaagcaatggttagg 21666498  T
Q  611 actctttgaatcccc 625  Q
    | |||| ||||||||    
T  21666497 attcttcgaatcccc 21666483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 25405730 - 25405610
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| || |||||||||| |||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||  || ||||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  500 ---taagttgacgatataaaa 517  Q
       ||||||||||||||||||    
T  25405630 ttgtaagttgacgatataaaa 25405610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 26649075 - 26648966
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||| ||||||||  ||||||||||||| |||||||| |||||||| |||||| ||||||| ||||||| |||||||||| ||||||||||||||| |    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatt 26648977  T
Q  495 tattttaagtt 505  Q
    |||||||||||    
T  26648976 tattttaagtt 26648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 563
Target Start/End: Original strand, 21847612 - 21847795
Alignment:
Q  379 aggagggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtcta 478  Q
    |||| |||||||||   ||||||||||||||| ||||||||||||| ||||||||||  |||||||| ||| ||||||| |||||||||||||||||| |    
T  21847612 aggaaggtgatggtcatattaggcaagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtcca 21847710  T
Q  479 aacaactcgcgttacttattttaagttgacgata-taaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaac 563  Q
    ||||| || ||||||||| | |   || || | | ||||||||||||||| || | |||||||  |||||||||||||||||||||    
T  21847711 aacaattcacgttactta-tctggtttaacaaaattaaaataaaagagttgaaggatagagattgcaatttttatttgtttgcaac 21847795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 21449082 - 21449188
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||| | |||||| |   |||||    
T  21449082 ggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttac 21449181  T
Q  494 ttatttt 500  Q
    |||||||    
T  21449182 ttatttt 21449188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 517
Target Start/End: Original strand, 14779550 - 14779684
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  ||||||||||| ||||| ||||||| ||||||| ||||||| |||| |||| |||||| | |||||||||||||||| |||||  |    
T  14779550 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatat 14779649  T
Q  486 cgcgttacttattt---taagttgacgatataaaa 517  Q
    ||||||| ||||||   ||||||||||||||||||    
T  14779650 cgcgttatttatttttgtaagttgacgatataaaa 14779684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 625
Target Start/End: Original strand, 22620247 - 22620487
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||||||||||||||  ||||  ||||  | ||||||||||||||| |||| ||||||||||||| | |||||| ||||||||||| || |    
T  22620247 tgatggttggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataatt 22620346  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    | ||||||||||||| |    |  | |||||||||| ||||| |  |||||||||  |  ||||||| ||||||||||| |   ||||||||| |||||     
T  22620347 cacgttacttatttttaaacaataaaataaaataaaggagttgagggttagagattgccttttttatctgtttgcaacaaatcgagttacctgttttggt 22620446  T
Q  586 tgcagaaaa-gtaagcaacagttaggactctttgaatcccc 625  Q
    || |||||| ||||||| | |||| || ||||| |||||||    
T  22620447 tgtagaaaatgtaagcagcggttaagattctttaaatcccc 22620487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 18736354 - 18736240
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||  ||||||||||| |||||||||| || |||||||||||||||||||  ||||||||||| | |||||||||||||||  |||||| |    
T  18736354 tgatggtcggatatggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatt 18736255  T
Q  486 cgcgttacttatttt 500  Q
      |||||||||||||    
T  18736254 tccgttacttatttt 18736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 528
Target Start/End: Original strand, 16179010 - 16179137
Alignment:
Q  404 agtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt---t 500  Q
    ||||||| |||||||||| || |||||||| ||||||||||| ||||||||||| | |||  ||||||||||| |||||| ||  |||||||||||   |    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  501 aagttgacgatataaaataaaagagtta 528  Q
    ||||||||||||||||||| ||| ||||    
T  16179110 aagttgacgatataaaatataagggtta 16179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 624
Target Start/End: Original strand, 16359856 - 16360094
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||  |||||||||||||||| ||||||||||||| |||||||| || |||||| | ||| ||||||| ||| | ||||||||| || || |||||    
T  16359856 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccacatgtactgtcgtttcatccaatcaact 16359954  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaag--ttagagatatcaatttttatttgtttgcaacagagatagttacctggtttg 583  Q
    ||||| ||| |||||      |  | || ||||||| |||||||  |  ||||||||  |||||||||||||||||||||| ||  ||||||||| ||||    
T  16359955 cgcgtcactaatttttcaacaattaaattaaataaa-gagttaaggggattagagattgcaatttttatttgtttgcaacaaagcaagttacctgttttg 16360053  T
Q  584 gctgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
    | |||||||||| |||||  ||||||||||||  |||||||    
T  16360054 gttgcagaaaagaaagcataagttaggactctacgaatccc 16360094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 498
Target Start/End: Complemental strand, 27117832 - 27117720
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||| |||| || ||| |||||||||||  | ||||||      
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatc 27117733  T
Q  486 cgcgttacttatt 498  Q
     ||||||||||||    
T  27117732 tgcgttacttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 499
Target Start/End: Complemental strand, 24306417 - 24306307
Alignment:
Q  388 atggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcg 487  Q
    ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||||||| ||||||||||| | |||||| ||||||  | ||| || |||    
T  24306417 atggtcggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcg 24306319  T
Q  488 cgttacttattt 499  Q
    ||||||||||||    
T  24306318 cgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 16787840 - 16787726
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||||||| | |  |||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | |||||| |    
T  16787840 tgatggtcggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatt 16787741  T
Q  486 cgcgttacttatttt 500  Q
     ||||||||||||||    
T  16787740 tgcgttacttatttt 16787726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 396 - 625
Target Start/End: Complemental strand, 32383102 - 32382883
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||           |||||||||||||| |||||| | | ||||| |    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg-----------attgtcgtttcgtccaaacaatttgtgttacct 32383014  T
Q  496 attttaagttgacgatataa--aataaaagagttaaaagttagagatat--caatttttatttgtttgcaacagagatagttacctggtttggctgcaga 591  Q
    |||||   || || ||| ||  |||||||||||| || ||| |||||||  |||||||||| ||||||||||||||  | ||||||| ||||| ||||||    
T  32383013 attttt--ttaacaataaaataaataaaagagttgaaggtt-gagatattgcaatttttatctgtttgcaacagagcaaattacctgttttggttgcaga 32382917  T
Q  592 aaagtaagcaacagttaggactctttgaatcccc 625  Q
    || || |||| | ||||||| |||||||||||||    
T  32382916 aatgttagcagccgttaggattctttgaatcccc 32382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 636
Target Start/End: Complemental strand, 31236157 - 31235911
Alignment:
Q  393 tggattaggcaa--gtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgt 490  Q
    ||||||||||||  ||||||  |||||||||| | |||||||||||||||| ||| |||  |||| | |  ||||||||||| ||| ||| || ||||||    
T  31236157 tggattaggcaaaagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgt 31236058  T
Q  491 tactta-ttttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatagttacctgg--tttggct 586  Q
    |||||| |||||||||||||||||  ||||||| |  |||  |||||||| |  |||||||||| | ||||||||||||  ||||  || |  ||||| |    
T  31236057 tacttatttttaagttgacgatat--aataaaata--taagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggtt 31235962  T
Q  587 gcagaaaagtaagcaacagttaggactctttgaa-tccccctatttatatt 636  Q
    ||| ||||||||||||| |||| || |||||||| |||| |||||||||||    
T  31235961 gcataaaagtaagcaacggttaagattctttgaattccctctatttatatt 31235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 24267888 - 24267783
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||| ||||||||  ||||| |||| || |||||||| ||||||||| | |||| ||||||||| |||||| ||||||||||| ||| || ||||||    
T  24267888 ggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgttac 24267789  T
Q  494 ttattt 499  Q
    ||||||    
T  24267788 ttattt 24267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 21988082 - 21987982
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| ||||| |||||||  ||||||||||||||||||| ||||||||||     ||||||| ||||||| || ||| |||||||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattt 21987983  T
Q  500 t 500  Q
    |    
T  21987982 t 21987982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 508
Target Start/End: Complemental strand, 15813631 - 15813516
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataa-gtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    ||||||| ||||||||| |||||||||| ||   ||||||||||||| ||||| ||| ||||||| | ||||||||||||| |  |||||| ||| ||||    
T  15813631 ggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgtta 15813532  T
Q  493 cttattttaagttgac 508  Q
    |||||||| |||||||    
T  15813531 cttatttttagttgac 15813516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 512
Target Start/End: Original strand, 44795362 - 44795480
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgt-ctaaacaactcgcgtta 492  Q
    ||||||| |||||||||  || | ||||||| ||||||||| ||||||| || ||||||||||| ||||||||||||||||| | ||| ||||||  |||    
T  44795362 ggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaaaaaactcgactta 44795460  T
Q  493 cttattttaagttgacgata 512  Q
    ||||||||| ||||| ||||    
T  44795461 cttattttatgttgatgata 44795480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 26540892 - 26540993
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||| | ||||| || || |  ||| |||| | ||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattccaactagacaatttgcgttactta 26540990  T
Q  497 ttt 499  Q
    |||    
T  26540991 ttt 26540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 569 - 633
Target Start/End: Complemental strand, 25961095 - 25961032
Alignment:
Q  569 tagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||||| ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  25961095 tagttacctg-tttggttgcagaaaagtaagaagcggttaggactctttgaatccccctatttat 25961032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 633
Target Start/End: Complemental strand, 15813471 - 15813409
Alignment:
Q  571 gttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||| ||||| |||||||||||||||| ||||||| | |||| ||||||||||||||||    
T  15813471 gttacctgttttggttgcagaaaagtaagcagcagttagtattcttagaatccccctatttat 15813409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 517
Target Start/End: Complemental strand, 21334807 - 21334699
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta---ttttaagttgac 508  Q
    ||||| |||| || |||||||||||||||||| | ||||||||||  | | |||||| |||| || |||||| || |||||||||   ||||||||||||    
T  21334807 aaatcatttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttttttaagttgac 21334708  T
Q  509 gatataaaa 517  Q
    |||||||||    
T  21334707 gatataaaa 21334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 396 - 449
Target Start/End: Original strand, 34480964 - 34481017
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatat 449  Q
    ||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  34480964 attagacaaatgtacaaaatcgtttaccaagtaataaagtgataagtagaatat 34481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 16069650 - 16069551
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| || | ||| |||| |||||||||||||||||| |||||| ||| || | ||||||||||||||| | ||||| ||  |||||||||||    
T  16069650 ggcaagtgtaccaatt-gttaaccaagtaataaagtgataagtaaaatatcatatacacagggattgtcgtttcgtttgaacaattcttgttacttattt 16069552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 633
Target Start/End: Complemental strand, 17121454 - 17121367
Alignment:
Q  546 tttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||| |||||||||||| ||||  |||||| || ||||| |||||||||||||||| | ||||||| |||| |||||  |||||||||    
T  17121454 ttttcatttgtttgcaatagagcaagttacttgttttggttgcagaaaagtaagcagcggttaggattcttcgaatcttcctatttat 17121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 22622902 - 22622985
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    ||||||| |||| ||||||||||||| |||||| |||| |||||  | |||||||| ||||||| ||| || ||||||||||||    
T  22622902 aatcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttactta 22622985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 24307028 - 24306957
Alignment:
Q  427 taataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    |||||||||| |||||||| |||||||| |||| |||||||||||||  |||| ||| || ||||||||||||    
T  24307028 taataaagtg-taagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttacttattt 24306957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 16917008 - 16916933
Alignment:
Q  426 gtaataaagtga-taagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||| | |||||||| ||||||||||| | |||||||| |||||||  ||||| || |||||||||||||    
T  16917008 gtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttt 16916933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 621
Target Start/End: Complemental strand, 16069518 - 16069440
Alignment:
Q  544 aatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaat 621  Q
    ||||||||| || |||||||||||  |||| ||||| ||||| || ||||||||||||| ||||||||| |||| ||||    
T  16069518 aatttttatctgcttgcaacagagcaagtttacctgttttggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 18830611 - 18830693
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
    |||||| ||| ||||||||||||||| | || ||||| ||||| |||| |||||||||||||| ||| || | ||||||||||    
T  18830611 caatttctatctgtttgcaacagagaaattttacctgttttggttgcataaaagtaagcaacatttatgattttttgaatccc 18830693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 471
Target Start/End: Original strand, 25958105 - 25958178
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    ||||| ||||||| |||||||||||| | ||||| ||||| ||| |||| |||| |||||| |||||||||||||    
T  25958105 ttaggaaagtgtattaaatcgtttacaaagtaatgaagtg-taaatagagtatcatatccacatggattgtcgtt 25958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 18825655 - 18825711
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    ||||||||||| || ||||| |||| |||||||||||||||||| | |||||||||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatcca 18825711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 625
Target Start/End: Original strand, 22623034 - 22623115
Alignment:
Q  545 atttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||| | ||||||||||||  |||| ||||| ||||| |||||||||||||||| | ||||||| ||||  |||||||    
T  22623034 atttttatatatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagctgttaggattcttcaaatcccc 22623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 622
Target Start/End: Original strand, 29242648 - 29242728
Alignment:
Q  543 caatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatc 622  Q
    |||||||||| ||||||||||||||  || ||||||| ||||| |||| ||||||||| | | |||||||  |||||||||    
T  29242648 caatttttatctgtttgcaacagagcaagtttacctgttttggttgcaaaaaagtaagaagcggttaggatactttgaatc 29242728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 386 - 629
Target Start/End: Complemental strand, 18208362 - 18208121
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||||||||||| |||||||| ||||||||||| |||||||||| ||||||| |||||| |    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaatt 18208264  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggc 585  Q
    |  ||||||||||||   |||| |||||||||||||||||||||  ||| ||| |  |||||||||| ||||||||  ||||  |||||||| ||||||     
T  18208263 catgttacttattttgttttgatgatataaaataaaagagttaagggttggaggttgcaatttttatctgtttgcagtagagcaagttacct-gtttggt 18208165  T
Q  586 tgcagaaaagtaagcaacagttaggactctttgaatccccctat 629  Q
    |||||||||||||| | ||||||  |||||| ||||||||||||    
T  18208164 tgcagaaaagtaagtagcagttacaactcttcgaatccccctat 18208121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 382 - 633
Target Start/End: Original strand, 22755502 - 22755755
Alignment:
Q  382 agggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaac 481  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||| || ||||    
T  22755502 agggtgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaac 22755601  T
Q  482 aactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggt 580  Q
    || | || ||| ||||||||  || |||||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||||||  ||||||  | |    
T  22755602 aattggcattatttattttagttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagttactagtt 22755701  T
Q  581 ttggctgcagaaaagtaagcaacagttaggactctttgaa-tccccctatttat 633  Q
    |||| | || |||||||| ||||  ||| || |||| ||| |||||||||||||    
T  22755702 ttggttccaaaaaagtaatcaacgattatgattcttagaattccccctatttat 22755755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 385 - 626
Target Start/End: Complemental strand, 19283970 - 19283730
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| |||||||| ||||| ||||||||||||||||  ||||||||||||||||||| ||| ||||||| | | |||  ||||||||| ||||||     
T  19283970 gtgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaat 19283871  T
Q  485 tcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    | || | ||||||||||||||||||||||||| ||||||||||||  |||||||||  ||||||| || | ||||||| ||||| |||||||| ||||||    
T  19283870 ttgcttaacttattttaagttgacgatataaagtaaaagagttaagggttagagattacaattttaatctatttgcaatagagaaagttacct-gtttgg 19283772  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
     || |||||| |||||| | |||| |||| ||  ||||||||    
T  19283771 ttgtagaaaattaagcagcggttaagacttttcaaatccccc 19283730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 412 - 636
Target Start/End: Complemental strand, 24245632 - 24245407
Alignment:
Q  412 aaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt---taagttgac 508  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||   ||||||||     
T  24245632 aaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgag 24245533  T
Q  509 gatataaa--ataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaagcaacag 605  Q
     |||||||  ||||||| |||| ||     || | || |||||||||||||| ||||| ||  || ||||||| ||| | |||||||||||||||||| |    
T  24245532 aatataaaagataaaagggttagaa-----aggtttcgatttttatttgtttccaacaaagcaagtttacctgttttagttgcagaaaagtaagcaacgg 24245438  T
Q  606 ttaggactctttgaatccccctatttatatt 636  Q
    |||||| |||| |||||||||| ||||||||    
T  24245437 ttaggattcttcgaatccccctgtttatatt 24245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 403 - 629
Target Start/End: Original strand, 34487640 - 34487862
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaa 502  Q
    |||||||| |||| |||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||      
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgt 34487738  T
Q  503 gttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagca 601  Q
     |||||||||||| ||||||| || |||  |||||||||  |||||||||| ||||| ||||||||  | |||| | |||||| ||||||||||| ||      
T  34487739 tttgacgatataataataaaaaagataagggttagagattgcaatttttatctgttttcaacagagcaatttacat-gtttggttgcagaaaagttag-- 34487835  T
Q  602 acagttaggactctttgaatccccctat 629  Q
       |||||||||||| ||||||||||||    
T  34487836 -tggttaggactcttagaatccccctat 34487862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 393 - 633
Target Start/End: Original strand, 15690770 - 15691008
Alignment:
Q  393 tggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgtta 492  Q
    ||||||||| |||| ||| |||||||||||||  ||||||||||||||||||| |||||||||||   | |||||||||||||| || ||| || |||||    
T  15690770 tggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgtta 15690868  T
Q  493 cttattttaagttgacgatataaaataaaagagttaaa-agttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcag 590  Q
    |||||||| ||||||| | || ||||||||||||||||  ||||||||| | ||||||||||||||| | |||||||  | ||||||| ||||| |||||    
T  15690869 cttatttttagttgac-aaat-aaataaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaaattacctgttttggttgcag 15690966  T
Q  591 aaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
    |||||||||| |  ||||||| |||| ||||||||||||||||    
T  15690967 aaaagtaagc-agtgttaggattcttcgaatccccctatttat 15691008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 386 - 567
Target Start/End: Original strand, 18937733 - 18937913
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| ||||||||||||||||| ||||||||||  | |||||||||||||||||| | |||||||| || | ||||||| |||||||| |||||| |    
T  18937733 tgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaatt 18937831  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagtt-agagatatcaatttttatttgtttgcaacagag 567  Q
    | |||||||||||||||||| | |||||||||| ||||||||||  ||| |||||| ||||||||||| ||||||||||||||    
T  18937832 cacgttacttattttaagttaatgatataaaat-aaagagttaagggttgagagatttcaatttttatctgtttgcaacagag 18937913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 611
Target Start/End: Complemental strand, 17171659 - 17171443
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||| |||||||| ||||| |||| || ||||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||     
T  17171659 ggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaa 17171560  T
Q  494 ttattttaagttgacgatata--aaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcaga 591  Q
    |||||||||    || | |||  ||||||||||||| |  |||||||||  |||||||||| |  |||||||||||  ||||||||| ||||| |||| |    
T  17171559 ttattttaa---aacaaaataataaataaaagagttgagggttagagattgcaatttttatctagttgcaacagagcaagttacctgctttggttgcaaa 17171463  T
Q  592 aaagtaagcaacagttagga 611  Q
    || ||||||| ||| |||||    
T  17171462 aatgtaagcatcagctagga 17171443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 386 - 633
Target Start/End: Complemental strand, 24267068 - 24266824
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||| | ||||| || ||| ||| |||||| |    
T  24267068 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaatt 24266970  T
Q  486 cgcgttacttattttaagttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    || ||||||||||||   |||||||||||| ||||||||||||||  |||||| ||  |||||||||| |||||| |||| ||  ||  |||| ||||||    
T  24266969 cgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag--acct-gtttgg 24266873  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatcc-ccctatttat 633  Q
     | ||| |||||||||| | |||||||||||| |||||| ||||||||||    
T  24266872 ttacag-aaagtaagcagcggttaggactcttcgaatcctccctatttat 24266824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 386 - 633
Target Start/End: Complemental strand, 24343699 - 24343455
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||| | ||||| || ||| ||| |||||| |    
T  24343699 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaatt 24343601  T
Q  486 cgcgttacttattttaagttgacgatataa-aataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    || ||||||||||||   |||||||||||| ||||||||||||||  |||||| ||  |||||||||| |||||| |||| ||  ||  |||| ||||||    
T  24343600 cgtgttacttattttgttttgacgatataataataaaagagttaagggttagatattgcaatttttatctgtttgtaacaaagcaag--acct-gtttgg 24343504  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatcc-ccctatttat 633  Q
     | ||| |||||||||| | |||||||||||| |||||| ||||||||||    
T  24343503 ttacag-aaagtaagcagcggttaggactcttcgaatcctccctatttat 24343455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 386 - 499
Target Start/End: Complemental strand, 24852286 - 24852173
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||| | ||||||||||| ||||||||| ||||||||||||||| |    
T  24852286 tgatggttggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaatt 24852187  T
Q  486 cgcgttacttattt 499  Q
    | ||||||||||||    
T  24852186 cacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 19004326 - 19004226
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||| ||| ||| |||||| || ||||||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttattt 19004227  T
Q  500 t 500  Q
    |    
T  19004226 t 19004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 515
Target Start/End: Complemental strand, 25550609 - 25550487
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||| |||| |||||| | |||||||| ||||||| |||||| ||  ||||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttact 25550510  T
Q  495 tattt--taagttgacgatataa 515  Q
    |||||  ||||||||||||||||    
T  25550509 tattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 483
Target Start/End: Original strand, 15469929 - 15470018
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| || || ||||||||||| ||| |||||||||||||||||||||    
T  15469929 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaa 15470018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 636
Target Start/End: Complemental strand, 25402441 - 25402199
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| |||| |||| ||| ||||  |||||||||||||| ||| ||||||| | ||||||||||||||||  ||  | |||||||||||    
T  25402441 attaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttactt 25402342  T
Q  496 attttaag-ttgacgatataaaataaaagagttaaaagttagagatat-caatttttatttgtttgcaacagagatagttacctggtt-tggctgcagaa 592  Q
    |||||||| |||||   ||||||||||||||| ||  ||||||||| | |||||||||| |||||| || |||| ||||| |||  || ||| |||||||    
T  25402341 attttaagtttgac--aataaaataaaagagtgaagggttagagatttgcaatttttatctgtttgtaatagaggtagtttcctatttctggttgcagaa 25402244  T
Q  593 aagtaagcaacagttaggactctttgaat-ccccctatttatatt 636  Q
    ||||| ||||||  ||||| | || |||| |||| ||||||||||    
T  25402243 aagtacgcaacatgtaggatttttcgaatgccccttatttatatt 25402199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 402 - 622
Target Start/End: Original strand, 36175135 - 36175354
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||| ||||||||||||| ||||||||||| |  ||||| ||||||||||||| |||||||||||||||| |||||||  ||||||||||||||     
T  36175135 caagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttattttt 36175233  T
Q  502 agttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagca 601  Q
         |  | |  ||||||||||||| |  |||||||||  |||||||||| ||||| ||||| ||  ||||||||| ||||| || ||||||||||| |    
T  36175234 gaacaattaaaataaataaaagagttgagggttagagattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaa 36175333  T
Q  602 acagttaggactctttgaatc 622  Q
     | |||| || ||||||||||    
T  36175334 gcggttatgattctttgaatc 36175354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 400 - 518
Target Start/End: Complemental strand, 20315529 - 20315408
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatt- 498  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||| ||||||||||| ||||||| || ||||||| |||||| |||||| |||||||     
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattt 20315431  T
Q  499 ---ttaagttgacgatataaaat 518  Q
       ||||||||||||||||||||    
T  20315430 ttattaagttgacgatataaaat 20315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 402 - 621
Target Start/End: Original strand, 17431884 - 17432103
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt-- 499  Q
    ||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||| |  |||||||||||| || ||||||||| || |||||||||      
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattttt 17431983  T
Q  500 -taag--ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaag 595  Q
     ||||  ||| |||||||||||| ||| |||||     |||| | | ||||||| | ||||||||||||||  || |||| || ||||| ||||||||||    
T  17431984 ataagttttggcgatataaaatataagggttaa-----agagttgt-aatttttttctgtttgcaacagagcaagtttacttgttttggttgcagaaaag 17432077  T
Q  596 taagcaacagttaggactctttgaat 621  Q
    |||||| | ||||||| |||| ||||    
T  17432078 taagcagcggttaggattcttcgaat 17432103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 626
Target Start/End: Complemental strand, 24662214 - 24662051
Alignment:
Q  462 gattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgca 561  Q
    |||||| |||||| |||||||| || ||||||||||||||  || |||||||||||||||||||||||  ||||| ||| |||||||||| ||||||| |    
T  24662214 gattgttgtttcgcctaaacaattcacgttacttattttagtttaacgatataaaataaaagagttaagggttagcgatttcaatttttagttgtttgaa 24662115  T
Q  562 acagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccccc 626  Q
    ||||||  ||||| || |||| | ||||| |||||||| | | |||| ||||||| || ||||||    
T  24662114 acagagcaagtta-cttgttttgttgcagtaaagtaagtagcggttaagactcttcgattccccc 24662051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 39434474 - 39434561
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||| |||||||| |||||||||||| |||||||||| |||||||||| ||| ||| |||||| ||||||||||||||||    
T  39434474 aatcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttatttt 39434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 386 - 518
Target Start/End: Complemental strand, 15375997 - 15375861
Alignment:
Q  386 tgatggttggatta-ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    ||||||| |||||| ||||||||||| |||||||||||||  ||||||| ||||||||||| |||| |||||| | |||||||||||||||| ||| ||     
T  15375997 tgatggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaat 15375898  T
Q  485 tcgcgttacttatttt---aagttgacgatataaaat 518  Q
    | || |||||||||||   ||||||||| ||||||||    
T  15375897 ttgcattacttatttttgcaagttgacggtataaaat 15375861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 629
Target Start/End: Original strand, 34128636 - 34128864
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||| | | |||||| ||||||| ||| || || |||| |||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttattt 34128734  T
Q  500 ---taagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaag 595  Q
       |||||||| | |||||||   ||| |||||||   |||  |   |||||| | |||||||||| ||||  || ||||||| ||||| ||||||||||    
T  34128735 ttataagttgaaggtataaaagttaagggttaaaa---aga-cttgaaattttgacttgtttgcaatagagcaagtttacctgttttggttgcagaaaag 34128830  T
Q  596 taagcaacagttaggactctttgaatccccctat 629  Q
    |||||||| ||||||| |||| ||||||||||||    
T  34128831 taagcaacggttaggattcttcgaatccccctat 34128864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 500
Target Start/End: Original strand, 24140442 - 24140541
Alignment:
Q  400 ggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||| || |||||||||| |||||||||||||||||||| ||| |||||||   |||||||| ||||||| |||||| ||||||||| |||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattt 24140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 17185459 - 17185561
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||| ||||||||||||||| |||||||  ||||||||||||||||||| ||||||||| | | |||||||||||||  | |||||| || |||||| ||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgta 17185558  T
Q  497 ttt 499  Q
    |||    
T  17185559 ttt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 23380360 - 23380258
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||| | |||||||| ||||||||||||| ||||  | | |||||| ||| ||||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgctactta 23380261  T
Q  497 ttt 499  Q
    |||    
T  23380260 ttt 23380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 396 - 601
Target Start/End: Original strand, 26120860 - 26121063
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    |||||| |||||||| |||| |||||||||||||||||||  |||||||| |||| ||| || | |||||||||||||||| |||||| | || ||||||    
T  26120860 attaggaaagtgtaccaaattgtttaccatgtaataaagt-ttaagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattactt 26120958  T
Q  496 attttaagttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaag 595  Q
    |||||      |  | |||||||||||||||| |  |||||| || | ||||||||| |||||||| || ||| || ||||| |||| | |||||||| |    
T  26120959 atttttgaacaataaaataaaataaaagagttgagggttagatattttaatttttatctgtttgcagcatagaaagatacct-gttttgttgcagaaatg 26121057  T
Q  596 taagca 601  Q
    ||||||    
T  26121058 taagca 26121063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 421 - 500
Target Start/End: Complemental strand, 23388917 - 23388838
Alignment:
Q  421 accatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||  ||||| ||  ||||||||||||    
T  23388917 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttt 23388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 483
Target Start/End: Complemental strand, 24167699 - 24167601
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||| | |||||||| ||||||| |||||||||||||| ||||||||||  |||||||| |||| |||  | ||||||||||||||| || ||||||    
T  24167699 gtgatgatcggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaa 24167601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 19086285 - 19086181
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||  |||||||| ||||||||||||| |||||||||||||||||||| |||  |||||| ||| ||||| |||| ||| || ||| ||  |||||    
T  19086285 ggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgttac 19086186  T
Q  494 ttatt 498  Q
    |||||    
T  19086185 ttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 23265182 - 23265252
Alignment:
Q  429 ataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||  | |||||| || ||||||||||||    
T  23265182 ataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttattt 23265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 24656958 - 24656854
Alignment:
Q  395 gattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttact 494  Q
    |||||||||||||||| | || |||| |||  ||||||| | |||||||||  |||  ||| | ||||||||| ||||||||||||||| ||| ||||||    
T  24656958 gattaggcaagtgtaccagatagtttcccaattaataaaattataagtagagaatcaaatcaacatggattgttgtttcgtctaaacaattcgtgttact 24656859  T
Q  495 tattt 499  Q
    |||||    
T  24656858 tattt 24656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 26121437 - 26121367
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatcca 457  Q
    ||||||| ||||||||||||||||| |||||||||| || |||||||| || |||||||| ||| |||||||    
T  26121437 tgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatcca 26121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 471
Target Start/End: Original strand, 15544047 - 15544120
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||||||||||||| ||||||||||||| |||||||| || | |||||| |||||||| |||| ||||| |||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtatacatagggattatcgtt 15544120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 17315174 - 17315100
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||| | ||||||||||| |||||||||| |||| ||  ||||| ||  ||||||||||||    
T  17315174 gtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttt 17315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 19051542 - 19051647
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    |||||||  |||||||| ||||||||||| | ||||||||||||||||| || | ||||||||  | ||||||| ||| | ||||||||| ||  |||||    
T  19051542 ggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc-cagggattgttgttccatctaaacaattcttgttac 19051640  T
Q  494 ttatttt 500  Q
    |||||||    
T  19051641 ttatttt 19051647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 24265432 - 24265342
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaa-tccccctattta 632  Q
    |||||||||| ||||||||| | ||  ||||||||  ||| | |||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  24265432 caatttttatctgtttgcaataaagcaagttaccttatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctattta 24265342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 24342063 - 24341973
Alignment:
Q  543 caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaa-tccccctattta 632  Q
    |||||||||| ||||||||| | ||  ||||||||  ||| | |||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  24342063 caatttttatctgtttgcaataaagcaagttaccttatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctattta 24341973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 28253281 - 28253350
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    |||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||| || | ||||| |||||    
T  28253281 gcaaatgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagggattatcgtt 28253350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 500
Target Start/End: Original strand, 28664799 - 28664873
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||||||||||||||||||| |||||||| |||| ||| |||| ||||||   ||||| || |||||||||||||    
T  28664799 gtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttt 28664873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 20419951 - 20419995
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataa 440  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 636
Target Start/End: Complemental strand, 20744627 - 20744532
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccc-cctatttatatt 636  Q
    |||||||||| ||||||||||| ||  |||| ||||| ||||| || ||||||||||||| | ||||||| |||| ||||||| ||| ||||||||    
T  20744627 caatttttatctgtttgcaacatagcaagtttacctgttttggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatatt 20744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 20744925 - 20744866
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtaga 445  Q
    ||||||| ||||  ||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  20744925 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataaagtgatatgtaga 20744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 28664903 - 28664986
Alignment:
Q  543 caatttttatttgtttgcaacagag-atagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||   | ||||||| ||||| ||||||||| |||||||| |||| || |||| ||||||||    
T  28664903 caatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaaataagcaacggttaagattcttcgaatcccc 28664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 439
Target Start/End: Original strand, 17635268 - 17635322
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgata 439  Q
    |||||||| |||| |||||||| ||| |||||| |||| ||||||||||||||||    
T  17635268 gtgatggtcggataaggcaagtataccaaatcgcttacgatgtaataaagtgata 17635322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 427 - 499
Target Start/End: Complemental strand, 23014682 - 23014611
Alignment:
Q  427 taataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt 499  Q
    ||||||||||||||||||| ||| |||||| || |||||||||||||  |||  ||| || ||||||||||||    
T  23014682 taataaagtgataagtagagtattgtatcc-taaggattgtcgtttcaactaggcaattcacgttacttattt 23014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 24662256 - 24662212
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgat 438  Q
    |||||||| |||||||| |||||||||| || |||||||||||||    
T  24662256 ggattaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 426 - 636
Target Start/End: Complemental strand, 43301 - 43090
Alignment:
Q  426 gtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataaaataaaagag 525  Q
    |||||||||||||||||| | || |||||||| | |||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  43301 gtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaataaaagag 43202  T
Q  526 ttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttggctgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
     |||  |||||||||  |||||||||| ||||||||||||||  |||||||||  ||||| | |||||||  ||  | | |||| |||||||||||||||    
T  43201 ataagggttagagattgcaatttttatctgtttgcaacagagcaagttacctgtttttggttacagaaaacaaaatagcggttaagactctttgaatccc 43102  T
Q  625 cctatttatatt 636  Q
    ||| ||||||||    
T  43101 cctgtttatatt 43090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 396 - 636
Target Start/End: Complemental strand, 36099 - 35857
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    |||||| ||| |||||||||| ||||| | |||||||||||||||||||| ||||||||||| ||| ||||||||||| || ||| || ||| |||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttactt 36000  T
Q  496 attttaag-ttgacgatataaaataaaagagttaaa-agttagagatat-caatttttatttgtttgcaacagagatagttacctg-gtttggctgcaga 591  Q
    |||||||| ||||||  |||||||| ||||||||||  ||||||||| | |||||||||| | |||| |||| ||| |||||||||  ||||| ||||||    
T  35999 attttaagtttgacg--ataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagttacctgattttggttgcaga 35902  T
Q  592 aaagtaagcaacagttaggactctttgaatccccctatttatatt 636  Q
    |||||||||| | ||||||| |||| |||||||||||||||||||    
T  35901 aaagtaagcagcggttaggattcttagaatccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 413 - 601
Target Start/End: Original strand, 35549 - 35738
Alignment:
Q  413 aatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaag-ttgacgat 511  Q
    ||||||||| || ||||||||||||||| |||| ||| ||||||| ||||||| |||||||||| |||||| |||| |||||||||||||| |||| |      
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatg-- 35646  T
Q  512 ataaaataaaagagttaaa-agttagagatat-caatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagca 601  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||| ||||||| ||  ||||||||| ||||| |||||||| |||||||    
T  35647 ataaaataaaagagttaaagggttagagatttgcaatttttatttgtctgcaacaaagcaagttacctgttttggttgcagaaaggtaagca 35738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 437 - 633
Target Start/End: Complemental strand, 2881 - 2684
Alignment:
Q  437 ataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattttaagttgacgatataa-aataaaagagttaaaagtta 535  Q
    |||||| || ||||||||||| ||| |||||||||||||| |||||| ||| ||||||||||||   ||||| |||||| ||||||||||||||  ||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataataataaaagagttaagggtta 2782  T
Q  536 gagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcc-ccctatttat 633  Q
    |||||  |||||||||||| ||||||||| ||  |||||| |||||| | || |||||||||| |||| |||| ||||||| |||||| ||||||||||    
T  2781 gagattgcaatttttatttatttgcaacatagcaagttacatggttt-gttgtagaaaagtaaacaacggttaagactcttcgaatcctccctatttat 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 402 - 629
Target Start/End: Original strand, 2371 - 2596
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||| |||||||||||||  |||||||| |||||||||| ||||||||||| |||||||| | |||| || |||||| | |||||| |||||||     
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2470  T
Q  502 agttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcag-aaaagtaagc 600  Q
    | ||||| || |||||||||||||| ||  |||||||||   ||  ||||| ||||||||||||||| |||||||| |||| | || || |||||||| |    
T  2471 atttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacct-gtttcgttgtagaaaaagtaaac 2567  T
Q  601 aacagttaggactctttgaatccccctat 629  Q
    | | ||||||||||||  |||||||||||    
T  2568 agcggttaggactcttcaaatccccctat 2596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 402 - 629
Target Start/End: Original strand, 2402 - 2627
Alignment:
Q  402 caagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttta 501  Q
    ||||||||| |||||||||||||  |||||||| |||||||||| ||||||||||| |||||||| | |||| || |||||| | |||||| |||||||     
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2501  T
Q  502 agttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctggtttggctgcag-aaaagtaagc 600  Q
    | ||||| || |||||||||||||| ||  |||||||||   ||  ||||| ||||||||||||||| |||||||| |||| | || || |||||||| |    
T  2502 atttgacaatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttacct-gtttcgttgtagaaaaagtaaac 2598  T
Q  601 aacagttaggactctttgaatccccctat 629  Q
    | | ||||||||||||  |||||||||||    
T  2599 agcggttaggactcttcaaatccccctat 2627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 386 - 633
Target Start/End: Complemental strand, 89967 - 89720
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| | ||||| ||||||||  ||||||||||||| ||||||||||| |||||||| |||| |||| | | | |||||||||||||||||||||||    
T  89967 tgatggtcgaattagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaact 89869  T
Q  486 cgcgttacttattttaagttgacgatataaaataaaagagttaaaagttagaga-tatcaatttttatttgtttgcaacagagatagttacctggtttgg 584  Q
    |||||||||||||||||       |  | ||  |||||||||||  |||||||| | | ||||| ||| |||||||||| ||   ||||||||| |||||    
T  89868 cgcgttacttattttaaaacagtaaagtgaataaaaagagttaagggttagagatttttaatttctatctgtttgcaaccgaacaagttacctgttttgg 89769  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatccccctatttat 633  Q
     ||||||||| |||||| | ||||||||||||| |||| ||| ||||||    
T  89768 ttgcagaaaaataagcagcggttaggactctttaaatcaccccatttat 89720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 384 - 499
Target Start/End: Complemental strand, 4599 - 4484
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||| |||||||||||||||| |||||  |||||||||||| |||| ||| || |||| ||| ||||||||||| |||||||||| |||||| |||||||    
T  4599 ggtggtggttggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaa 4500  T
Q  484 ctcgcgttacttattt 499  Q
     ||| |||||||||||    
T  4499 ttcgtgttacttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 6282 - 6385
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||  ||||||||||| | |||||||||| ||||||| | ||||||||||| ||||||||| |||||||| |||||| |||| ||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattactt 6381  T
Q  496 attt 499  Q
    ||||    
T  6382 attt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 403 - 599
Target Start/End: Complemental strand, 919 - 722
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt--- 499  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||||  | ||||||||||||       
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattttta 821  T
Q  500 taag-ttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatag-ttacctg-gtttggctgcagaaaagt 596  Q
    |||| |||||||||||||| | ||| ||| |     | ||||  |||||||||| ||||||||||||||| || |||||||  ||||| |||||||||||    
T  820 taagtttgacgatataaaagataagggttta----gaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagt 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 69911 - 70012
Alignment:
Q  399 aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatt 498  Q
    |||||||||||| ||||| ||||||| |||||||||||| ||||| | |||||||| || | |||||||||||||||| |||||| || |||||||||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatt 70010  T
Q  499 tt 500  Q
    ||    
T  70011 tt 70012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 471
Target Start/End: Complemental strand, 15579 - 15494
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtt 471  Q
    ||||||| ||||||||||||||||  ||||| ||||||| |||||||||| ||| ||||| ||||||||||| |||||||||||||    
T  15579 tgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 476
Target Start/End: Original strand, 81471 - 81561
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    ||||||| |||||||||||||| ||| |||||||||||||  ||||||||||||||||||  ||| ||||||| ||||||||| ||||||||    
T  81471 gtgatgggtggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtc 81561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 69075 - 69195
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| ||||| || |||| ||||||||||||||||| ||  |||||||||| | ||||||||  ||  || |||||| | || || |    
T  69075 ggattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgc 69173  T
Q  494 ttattttaagttgacgatataa 515  Q
    ||||||| ||||||| ||||||    
T  69174 ttatttttagttgacaatataa 69195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 12105 - 12207
Alignment:
Q  397 ttaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactta 496  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||| | |||||||| ||||||||||||| ||||  | | |||||| ||| ||||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttcaacaagacaacttgcgctactta 12204  T
Q  497 ttt 499  Q
    |||    
T  12205 ttt 12207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 421 - 500
Target Start/End: Original strand, 3551 - 3630
Alignment:
Q  421 accatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttatttt 500  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||  ||||| ||  ||||||||||||    
T  3551 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttt 3630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 1719 - 1816
Alignment:
Q  386 tgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    ||||||| |||||||| |||||||| |||  |||||||| |||| ||||||||||||||| ||||||||||| | | |||||||||| || |||||||    
T  1719 tgatggtcggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaacaa 1816  T

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Target: scaffold0048 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 78589 - 78692
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttactt 495  Q
    ||||||||||||||| | ||||||||||| |||||||| ||||||||  |  |||||||||||| |||||||||||||  | || |||  ||||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttactt 78688  T
Q  496 attt 499  Q
    ||||    
T  78689 attt 78692  T

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Target: scaffold0019 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 499
Target Start/End: Original strand, 11223 - 11338
Alignment:
Q  385 gtgatggttggatt-aggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||||||||||| || |||||||||||||| ||||| ||  ||||||||||||||||||| |||| |||| | ||||||||| |||||  | ||||||    
T  11223 gtgatggttggatttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaa 11322  T
Q  484 ctcgcgttacttattt 499  Q
     | || ||||||||||    
T  11323 tttgcattacttattt 11338  T

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Target: scaffold0019; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 567
Target Start/End: Complemental strand, 181820 - 181639
Alignment:
Q  385 gtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaac 484  Q
    |||||||| ||| ||  ||||||||| |||||  |||||| ||||||||||||||| | || ||||||||||| || ||||||||||| ||| ||| ||     
T  181820 gtgatggtcggaataaacaagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataag 181722  T
Q  485 tcgcgttacttattttaag-ttgacgatataaaataaaagagttaaaagttagagatat---caatttttatttgtttgcaacagag 567  Q
    ||| ||||||||||||| | ||||||  || |||||||| || |||| |||| ||||||   |||| ||||||||||||||||||||    
T  181721 tcgtgttacttattttatgtttgacg--atgaaataaaa-agataaaggtta-agatatttgcaatatttatttgtttgcaacagag 181639  T

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Target: scaffold0002 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 622
Target Start/End: Original strand, 114573 - 114710
Alignment:
Q  489 gttacttattttaa---gttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgtttgcaacagagatagttacctg-gtttgg 584  Q
    ||||||||||||||   ||||| |||||||||||||||||  ||  |||||||||   ||||||||| |||||||||||||   | |||||||  |||||    
T  114573 gttacttattttaattagttgatgatataaaataaaagagacaatggttagagattgtaatttttatctgtttgcaacagaccaaattacctgtttttgg 114672  T
Q  585 ctgcagaaaagtaagcaacagttaggactctttgaatc 622  Q
     |||||||||| || |||| ||||||||||||||||||    
T  114673 ttgcagaaaaggaaacaacggttaggactctttgaatc 114710  T

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Target: scaffold1869 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 517
Target Start/End: Complemental strand, 488 - 369
Alignment:
Q  401 gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttacttattt- 499  Q
    |||||||||  | ||||||||| | |||||||||||||| ||||| ||||||||| | | |||||||| ||||||| |||||| || |||||  |||||     
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatattta 389  T
Q  500 --taagttgacgatataaaa 517  Q
      ||||||||||||||||||    
T  388 tataagttgacgatataaaa 369  T

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Target: scaffold0957 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 3146 - 3224
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttc 473  Q
    ||||||||||||||||| |||| |||||||| ||||||||||| || ||||| ||||||||||| | |||||||| ||||    
T  3146 ggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttc 3224  T

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Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 483
Target Start/End: Complemental strand, 7516 - 7429
Alignment:
Q  396 attaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaa 483  Q
    |||||| || |||||||||||||||| || |||||||||||||||||||| ||| ||||  | | | |||||||||| ||||||||||    
T  7516 attaggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaa 7429  T

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Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 19104 - 19208
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtctaaacaactcgcgttac 493  Q
    ||||||||||||||||| |||| ||||  || |||||||| ||||||||| | |||||||| || ||| ||| |||| | |||||||||| ||||||||     
T  19104 ggattaggcaagtgtaccaaattgttt-tcaagtaataaaatgataagtaaattatcgtatgcacatgaattatcgtgttgtctaaacaattcgcgttaa 19202  T
Q  494 ttattt 499  Q
    ||||||    
T  19203 ttattt 19208  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 445
Target Start/End: Complemental strand, 37474 - 37413
Alignment:
Q  384 ggtgatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtaga 445  Q
    ||||||||| ||||||| ||| |||||||||| |||||||| |||||||||||||| |||||    
T  37474 ggtgatggtcggattagacaaatgtactaaattgtttaccaagtaataaagtgatatgtaga 37413  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 494
Target Start/End: Complemental strand, 18858 - 18750
Alignment:
Q  387 gatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcg-tatccatatggattgtcgtttcgtctaaacaact 485  Q
    |||||||||||||||||||||||| ||||  |||| || |||||||| | ||||||||| ||||| |||||| ||| ||  |||| | |||||||||| |    
T  18858 gatggttggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcgtgttgtctaaacaatt 18759  T
Q  486 cgcgttact 494  Q
     ||||||||    
T  18758 tgcgttact 18750  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 496
Target Start/End: Complemental strand, 223143 - 223033
Alignment:
Q  387 gatggttggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcg-tatccatatggattgtcgtttcgtctaaacaact 485  Q
    ||||||| |||||||||||||| | ||||  |||| || |||||||| | ||||||||| ||||| |||||| ||| ||  || | | |||||||||| |    
T  223143 gatggttagattaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcatgttgtctaaacaatt 223044  T
Q  486 cgcgttactta 496  Q
    |||||||||||    
T  223043 cgcgttactta 223033  T

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Target: scaffold0671 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 572 - 655
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||||| ||||||||||||||  | || ||||| ||||| |||||||||||||||| | ||||||| |||| ||||||||    
T  572 caatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 655  T

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Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 29909 - 29975
Alignment:
Q  403 aagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgt 470  Q
    |||||||| ||||||||||||| ||||||||||| |||||||| ||| |||||||||  |||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgt 29975  T

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Target: scaffold0351 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 315 - 151
Alignment:
Q  462 gattgtcgtttcgtctaaacaactcgcgttacttattttaa---gttgacgatataaaataaaagagttaaaagttagagatatcaatttttatttgttt 558  Q
    |||||||||||| || | |||| | | ||||||||||||||   ||| ||| ||||||||||||||  |||  |||||||||  |||||||||| |||||    
T  315 gattgtcgtttcatccatacaatttgtgttacttattttaattagttaacggtataaaataaaagaaataatggttagagattgcaatttttatctgttt 216  T
Q  559 gcaacagagatagttacctg-gtttggctgcagaaaagtaagcaacagttaggactctttgaatc 622  Q
    |||||| |   | ||| | |  ||||| |||||||||| || |||| ||||||||||||||||||    
T  215 gcaacaaaccaaattatcggtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 151  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 476
Target Start/End: Original strand, 21259 - 21351
Alignment:
Q  385 gtgatggttggattag--gcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtatccatatggattgtcgtttcgtc 476  Q
    |||||||| |||||||  |||||||||| || ||||| || | |||||||||||||||||||| |||| |||||| | |||||||| |||||||    
T  21259 gtgatggtcggattagtagcaagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtc 21351  T

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Target: scaffold0056; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 25116 - 25199
Alignment:
Q  543 caatttttatttgtttgcaacagagatagtt-acctggtttggctgcagaaaagtaagcaacagttaggactctttgaatcccc 625  Q
    |||||||| | | ||||||||||||  |||| ||||| ||||| |||||||||||||||||| ||||||| ||||  |||||||    
T  25116 caatttttctctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcaaatcccc 25199  T

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Target: scaffold0056; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 21406 - 21488
Alignment:
Q  543 caatttttatttgtttgcaacagagatag-ttacctggtttggctgcagaaaagtaagcaacagttaggactctttgaatccc 624  Q
    |||||||||||||||||||||||||  || ||||||| ||||| | |||||||||||| | |  |||||| |||| |||||||    
T  21406 caatttttatttgtttgcaacagaggaagtttacctgttttggtttcagaaaagtaagtagcgattaggattcttcgaatccc 21488  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 51116 - 51162
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataa 440  Q
    |||||||||||||| || |||| |||||||| |||||||||||||||    
T  51116 ggattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 72065 - 72125
Alignment:
Q  394 ggattaggcaagtgtactaaatcgtttaccatgtaataaagtgataagtagaatatcgtat 454  Q
    ||||| || |||||||| |||| ||| |||| |||||||||||||||||||| ||| ||||    
T  72065 ggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagagtatggtat 72125  T

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