View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16432_low_20 (Length: 256)
Name: NF16432_low_20
Description: NF16432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16432_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 1824288 - 1824050
Alignment:
| Q |
1 |
aaatccaacagataacataaaggaaatgtaagagagagtgtttgatatatcattgtttcattgaaacttatggatttttcatcctaatgcaaaaactatg |
100 |
Q |
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| T |
1824288 |
aaatccaacagataacataaaggaaatgtaagagagagtgtttgatatatcattgtttcattgaaacttatggatttttcatcctaatgcaaaaactatg |
1824189 |
T |
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| Q |
101 |
ctatatatttgctaatcaaaccgaaaaaacttaatgtgaatgattgctttcacactatatcatattcattgaaacttatggatttcttgtttcagatatc |
200 |
Q |
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| T |
1824188 |
ctatatatttgctaatcaaaccgaaaaaagttaatgtgaatgattgctttcacactatatcatattcattgaaacttatggatttcttgtttcagatatc |
1824089 |
T |
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| Q |
201 |
tactgttttgctgctgcatattgttaaattaacatttct |
239 |
Q |
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|||||||||||||||||||||||||||||||| |||||| |
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| T |
1824088 |
tactgttttgctgctgcatattgttaaattaaaatttct |
1824050 |
T |
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