View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16433_high_12 (Length: 328)
Name: NF16433_high_12
Description: NF16433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16433_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 24355393 - 24355698
Alignment:
| Q |
8 |
ccaagaatattgattccaaatcttctgatcatgaatatacgtgttccgtgtccaacacatctagttatattcgatcgtgtgttttgtctgtgtcagtgct |
107 |
Q |
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| T |
24355393 |
ccaataatattgattccaaatcttctgatcatgaatatacgtgttccgtgtccaaaacatctagttatattcgatcgtgtgttttgtctgtgtcagtgct |
24355492 |
T |
|
| Q |
108 |
tcgtataaattgacgagaacaattcataagtctagtcaatgacttgggaagaagctagtattacttactccaatttgaaaacaatgaaatcattatatta |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
24355493 |
tcgtataaattgacgagaacaattcataagtctagtcaatggcttgggaagaagctagtattacttactccaatttgaaaacaatgaaaatattatatta |
24355592 |
T |
|
| Q |
208 |
ctttattttataaacaatcattatattacttgctagttaatttaccggttattggcaataaaaagtttgttttttgaagaatttagttgaagacaacatt |
307 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24355593 |
ctttatttttgaaacaatcattatattacttgctagttaatttaccggttattggcaataaaaagtttgttttttgaagaatttagttgaagacagcatt |
24355692 |
T |
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| Q |
308 |
tgattt |
313 |
Q |
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|||||| |
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| T |
24355693 |
tgattt |
24355698 |
T |
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