View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16435_high_10 (Length: 479)

Name: NF16435_high_10
Description: NF16435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16435_high_10
NF16435_high_10
[»] chr6 (8 HSPs)
chr6 (11-466)||(20205197-20205652)
chr6 (11-466)||(22099220-22099675)
chr6 (25-466)||(21971772-21972216)
chr6 (24-444)||(20085890-20086310)
chr6 (25-444)||(22204853-22205272)
chr6 (25-442)||(24385068-24385484)
chr6 (24-437)||(20237803-20238216)
chr6 (24-437)||(22131787-22132200)
[»] scaffold0264 (1 HSPs)
scaffold0264 (25-466)||(15841-16281)
[»] scaffold0007 (1 HSPs)
scaffold0007 (25-448)||(5199-5625)
[»] scaffold0074 (1 HSPs)
scaffold0074 (25-466)||(47660-48098)


Alignment Details
Target: chr6 (Bit Score: 452; Significance: 0; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 11 - 466
Target Start/End: Original strand, 20205197 - 20205652
Alignment:
Q  11 cacagagtctagaaggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcga 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20205197 cacagagtctagaaggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcga 20205296  T
Q  111 caacaaataagacagaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagttta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20205297 caacaaataagacagaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagttta 20205396  T
Q  211 gaatcttgtttggaatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20205397 gaatcttgtttggaatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagc 20205496  T
Q  311 taggataaagaaatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20205497 taggataaagaaatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacaggttctgcaatcattaggcgacaaatc 20205596  T
Q  411 cggcgtgcactgagctagacagtaaagggtctgattttccgaatcttgtgcttctt 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20205597 cggcgtgcactgagctagacagtaaagggtctgattttccgaatcttgtgcttctt 20205652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 11 - 466
Target Start/End: Original strand, 22099220 - 22099675
Alignment:
Q  11 cacagagtctagaaggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcga 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22099220 cacagagtctagaaggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcga 22099319  T
Q  111 caacaaataagacagaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagttta 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22099320 caacaaataagacagaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagttta 22099419  T
Q  211 gaatcttgtttggaatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22099420 gaatcttgtttggaatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagc 22099519  T
Q  311 taggataaagaaatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22099520 taggataaagaaatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacaggttctgcaatcattaggcgacaaatc 22099619  T
Q  411 cggcgtgcactgagctagacagtaaagggtctgattttccgaatcttgtgcttctt 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22099620 cggcgtgcactgagctagacagtaaagggtctgattttccgaatcttgtgcttctt 22099675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 25 - 466
Target Start/End: Original strand, 21971772 - 21972216
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  21971772 ggaagatcacctcgacacatgaagagaccatacgcaatttcttccactttaagccaataaaattttttgccgatggtggcgttcgacaacaaataagaca 21971871  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagt---ttagaatcttgttt 221  Q
    |||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||  ||||||||||||   |||||||||||| |    
T  21971872 gaagtagtttgatgtttttgtcagtgattgtattgtaatttcttgagcaattataggaaagataaaatggatcttctgaaagtattttagaatcttgtat 21971971  T
Q  222 ggaatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaaga 321  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21971972 ggaatcatttgtttgaggagcaagctcatttggggaaagaacataagtagacctataaaatggatataattcatacctaacattacagctaggataaaga 21972071  T
Q  322 aatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcact 421  Q
    |||||||| || ||||||||| |||| || | ||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  21972072 aatctcccaccaacctttccaacacagctttgtgaaagtgtctcaatagcactagtgagacaggttctgcaatcattaggcgacaaatccagcgtgcact 21972171  T
Q  422 gagctagacagtaaagggtctgattttccgaatcttgtgcttctt 466  Q
    ||||||||| |||||||||||||||||||||| || |||||||||    
T  21972172 gagctagactgtaaagggtctgattttccgaaactcgtgcttctt 21972216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 24 - 444
Target Start/End: Original strand, 20085890 - 20086310
Alignment:
Q  24 aggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagac 123  Q
    |||||| ||||||||||||| |||||| || ||||| ||||| ||||||||||   ||| |||||||| |||  | |||||||| ||  ||| ||||||     
T  20085890 aggaaggtcacctcgacacaagaagaggccgtacaccatttcatccactttaacagtataaaatttttcgccatttgtggcgttggaggacagataagag 20085989  T
Q  124 agaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgg 223  Q
    ||||||||||||| ||| |||| |||||||||  ||| ||||||||||||||||||||||||||||| ||  |||| ||||| | |||||||||| || |    
T  20085990 agaagtaatttgaagttattgttagtgattgtactgttgtttcttgagcaattataggaaagataaattggatcttgtgaaaatctagaatcttggtttg 20086089  T
Q  224 aatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaa 323  Q
    ||| ||||||| ||||| | ||||||||||| ||| || || |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||     
T  20086090 aatgatttgtttgaggaacaagctcatttggcgaaggagcattaatagacctataaaaaggatataattcatacctaacattacagctaggaaaaagaac 20086189  T
Q  324 tctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactga 423  Q
    |||||| |||||||||||||||||||   | | || |||||||||||||||| |||||||| |||||||||||   || ||||| |||||||||||||||    
T  20086190 tctcccacccacctttccatcacaacagctaggaagtttctcaatagcactattgagacaggttctgcaatcaccgggtgacaagtccggcgtgcactga 20086289  T
Q  424 gctagacagtaaagggtctga 444  Q
    |||||||||||||||||||||    
T  20086290 gctagacagtaaagggtctga 20086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 25 - 444
Target Start/End: Complemental strand, 22205272 - 22204853
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||| |||||||||||||||||||| || ||||| |||||||||||||| |   | || || |||  |||  | |||||||| ||  |||||||||| |    
T  22205272 ggaaggtcacctcgacacatgaagaggccgtacaccatttcttccacttttactttttggaaatttccgccatttgtggcgttggaggacaaataagaga 22205173  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgga 224  Q
    |||||||||||| |||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||  |||| ||||| | ||||||||||  | ||    
T  22205172 gaagtaatttgaagtttttgttagtgattttactgtggtttcttgagcaattataggaaagataaaatggatcttgtgaaaatctagaatcttgggttga 22205073  T
Q  225 atcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaat 324  Q
    || ||||||| ||||| | ||||||||||||||| || || |||||||||||||||| ||||||| ||||||||| | ||||||||||||| ||| || |    
T  22205072 atgatttgtttgaggaacaagctcatttggtgaaggagcattaatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaacaact 22204973  T
Q  325 ctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactgag 424  Q
    ||| | |||||||||||||||||||   | | || || ||||||||||||| | |||||| |||||||||||   || ||||| ||||||||||||||||    
T  22204972 ctcgcacccacctttccatcacaacagctaggaagttcctcaatagcactattaagacaggttctgcaatcaccgggtgacaagtccggcgtgcactgag 22204873  T
Q  425 ctagacagtaaagggtctga 444  Q
    |||| |||||||||||||||    
T  22204872 ctaggcagtaaagggtctga 22204853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 25 - 442
Target Start/End: Complemental strand, 24385484 - 24385068
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||| |||||||||||||||||||| || ||||| |||||||||||||| |   |||  |||||||||||  | |||||||| ||  ||| |||||| |    
T  24385484 ggaaggtcacctcgacacatgaagaggccgtacaccatttcttccacttttacagtatagaattttttgccatttgtggcgttggaggacagataagaga 24385385  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgga 224  Q
    |||||||||||| ||| | ||  |||||| | |||||||||||||||||||||||||||||||||| ||  |||| ||||| | ||||||||||||| ||    
T  24385384 gaagtaatttgaagttatcgtttgtgattatattgtggtttcttgagcaattataggaaagataaattggatcttgtgaaaatctagaatcttgttttga 24385285  T
Q  225 atcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaat 324  Q
    |||||||||| ||||| | |||||||||| |||| || || |||||||  ||||||| ||| ||| ||||||||| |  |||||||||||| || ||| |    
T  24385284 atcatttgtttgaggaacaagctcatttgatgaaggagcaataatagatttataaaaaggaaatagttcatacctaatgttacagctaggaaaaggaact 24385185  T
Q  325 ctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactgag 424  Q
    || || |||  ||||||||||||||    || ||     |||||||||||| |||||||| |||||||||||||||| ||||| || |||||||||||||    
T  24385184 ct-ccaccctgctttccatcacaacatagtggaagagattcaatagcactattgagacaggttctgcaatcattaggggacaagtctggcgtgcactgag 24385086  T
Q  425 ctagacagtaaagggtct 442  Q
    ||| | ||||||| ||||    
T  24385085 ctaaatagtaaagcgtct 24385068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 24 - 437
Target Start/End: Original strand, 20237803 - 20238216
Alignment:
Q  24 aggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagac 123  Q
    |||||| ||||||||||||| |||||| || |||||  ||||||||||||||    |||| ||| || ||||  | |||||||| ||  ||||||||||     
T  20237803 aggaaggtcacctcgacacaagaagaggccgtacaccttttcttccactttagcaatatggaatgttgtgccatttgtggcgttggaagacaaataagag 20237902  T
Q  124 agaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgg 223  Q
    ||||||||||||| |||||||| |||||||||  |||||||||||| |||||||| ||||||||||| ||  |||| || ||  |||||||||||||| |    
T  20237903 agaagtaatttgaagtttttgttagtgattgtactgtggtttcttgggcaattatcggaaagataaactggatcttgtgtaaaattagaatcttgttttg 20238002  T
Q  224 aatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaa 323  Q
    ||||||||||| ||||| | ||||||||| ||||| || || || |||| |||||||| |||||||  |||||||| | |||||| |||||||| | |      
T  20238003 aatcatttgtttgaggaacaagctcatttagtgaaggagcattagtagatctataaaaaggatatagctcatacctaatattacaactaggatataaatt 20238102  T
Q  324 tctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactga 423  Q
    |||||| |||  |||||||||| |    ||||||| ||||  |||||||| || ||| ||| |||||||||||||   |||||| || ||||||||||||    
T  20238103 tctcccaccctgctttccatcatacacatttgaaagtttcctaatagcacaaccgaggcaggttctgcaatcattgaacgacaagtctggcgtgcactga 20238202  T
Q  424 gctagacagtaaag 437  Q
    ||||||||||||||    
T  20238203 gctagacagtaaag 20238216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 24 - 437
Target Start/End: Original strand, 22131787 - 22132200
Alignment:
Q  24 aggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagac 123  Q
    |||||| ||||||||||||| |||||| || |||||  ||||||||||||||    |||| ||| || ||||  | |||||||| ||  ||||||||||     
T  22131787 aggaaggtcacctcgacacaagaagaggccgtacaccttttcttccactttagcaatatggaatgttgtgccatttgtggcgttggaagacaaataagag 22131886  T
Q  124 agaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgg 223  Q
    ||||||||||||| |||||||| |||||||||  |||||||||||| |||||||| ||||||||||| ||  |||| || ||  |||||||||||||| |    
T  22131887 agaagtaatttgaagtttttgttagtgattgtactgtggtttcttgggcaattatcggaaagataaactggatcttgtgtaaaattagaatcttgttttg 22131986  T
Q  224 aatcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaa 323  Q
    ||||||||||| ||||| | ||||||||| ||||| || || || |||| |||||||| |||||||  |||||||| | |||||| |||||||| | |      
T  22131987 aatcatttgtttgaggaacaagctcatttagtgaaggagcattagtagatctataaaaaggatatagctcatacctaatattacaactaggatataaatt 22132086  T
Q  324 tctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactga 423  Q
    |||||| |||  |||||||||| |    ||||||| ||||  |||||||| || ||| ||| |||||||||||||   |||||| || ||||||||||||    
T  22132087 tctcccaccctgctttccatcatacacatttgaaagtttcctaatagcacaaccgaggcaggttctgcaatcattgaacgacaagtctggcgtgcactga 22132186  T
Q  424 gctagacagtaaag 437  Q
    ||||||||||||||    
T  22132187 gctagacagtaaag 22132200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 150; Significance: 4e-79; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 25 - 466
Target Start/End: Original strand, 15841 - 16281
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||| |||||||||||||||||||| || ||||| |||||||||||||| |   | || || ||| |||| || |||||||| ||  ||| |||||| |    
T  15841 ggaaggtcacctcgacacatgaagaggccgtacaccatttcttccacttttactttttggaaatttctgcc-attgtggcgttggaggacagataagaga 15939  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgga 224  Q
    |||||||||||| ||| |||| |||||||||  ||| ||||||||||||||||||||||||||||| ||  |||| ||||| | |||||||||| || ||    
T  15940 gaagtaatttgaagttattgttagtgattgtactgttgtttcttgagcaattataggaaagataaattggatcttgtgaaaatctagaatcttggtttga 16039  T
Q  225 atcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaat 324  Q
    || ||||||| ||||| | ||||||||||| ||| || || |||||||||||||||| ||||||| ||||||||| ||||||||||||||  ||||||||    
T  16040 atgatttgtttgaggaacaagctcatttggcgaaggagcattaatagacctataaaaaggatatagttcatacctaacattacagctaggcaaaagaaat 16139  T
Q  325 ctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactgag 424  Q
    ||||| ||||||||||||| || || |   | ||     ||||||||| ||  ||||||| |||||||||  ||||| ||||| || |||||||||||||    
T  16140 ctcccacccacctttccataaccacacagaggaagaagatcaatagcagtatagagacaggttctgcaattgttaggagacaagtctggcgtgcactgag 16239  T
Q  425 ctagacagtaaagggtctgattttccgaatcttgtgcttctt 466  Q
    |||||||||| ||||||||||||| |||| || |||||||||    
T  16240 ctagacagtatagggtctgatttttcgaaactcgtgcttctt 16281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 25 - 448
Target Start/End: Complemental strand, 5625 - 5199
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||| |||||||||||||||||||| |||||||   |||||||||||||||   ||||  |||||| |||  | |||||||| ||  |||||||||| |    
T  5625 ggaaggtcacctcgacacatgaagaggccatacagcgtttcttccactttaacagtatgggatttttcgccatttgtggcgttggaggacaaataagaga 5526  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgga 224  Q
    |||||||||||| |||||| | |||||||||  | |||||||||||||||||||||||||||||||| |  |||| ||||| | ||| ||||||||| ||    
T  5525 gaagtaatttgaagtttttcttagtgattgtactttggtttcttgagcaattataggaaagataaaagggatcttttgaaaatctagtatcttgttttga 5426  T
Q  225 atcatttgttcgaggagctagctcatttggtgaaagaacagta---atagacctataaaatggatataattcataccttacattacagctaggataaaga 321  Q
    ||  |||||| ||||| | |||||||||||||||  |  ||||   |||||||||||||| ||||||| ||||||||| | ||||||||||||| ||| |    
T  5425 atagtttgtttgaggaacaagctcatttggtgaagaagtagtattgatagacctataaaaaggatatagttcatacctaatattacagctaggaaaaaca 5326  T
Q  322 aatctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcact 421  Q
    | |||||| ||| ||||||||||||||  | | | ||  |  |||||||| |||  ||||||| |||||||||  ||||| ||||| |||||||||||||    
T  5325 actctcccaccctcctttccatcacaaaccataggaagatattcaatagctctatggagacaggttctgcaattgttaggggacaagtccggcgtgcact 5226  T
Q  422 gagctagacagtaaagggtctgatttt 448  Q
    |  |||||||||| |||||||||||||    
T  5225 gttctagacagtacagggtctgatttt 5199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 466
Target Start/End: Complemental strand, 48098 - 47660
Alignment:
Q  25 ggaagatcacctcgacacatgaagagaccatacacaatttcttccactttaaggctatgaaattttttgccgatggtggcgttcgacaacaaataagaca 124  Q
    ||||| |||||||||||||||||||| |||||||  ||||||||||||||||   ||||  |||||| |||  | |||||||| ||  |||||||||| |    
T  48098 ggaaggtcacctcgacacatgaagaggccatacagcatttcttccactttaacagtatgggatttttcgccatttgtggcgttggaggacaaataagaga 47999  T
Q  125 gaagtaatttgatgtttttgtcagtgattgtgttgtggtttcttgagcaattataggaaagataaaatgattcttctgaaagtttagaatcttgtttgga 224  Q
    |||||||||||| |||||| | |||||||||  |||||||||||| |||||||||||||||||||| ||  |||| ||||| | ||||||||||||| ||    
T  47998 gaagtaatttgaagtttttcttagtgattgtactgtggtttcttgggcaattataggaaagataaattggatcttgtgaaaatctagaatcttgttttga 47899  T
Q  225 atcatttgttcgaggagctagctcatttggtgaaagaacagtaatagacctataaaatggatataattcataccttacattacagctaggataaagaaat 324  Q
    ||  |||||| ||||| | ||||||||||||||   |  | | |||||||||||||| ||||||| ||||||||| ||||||||||||||| ||| ||      
T  47898 atgttttgtttgaggaacaagctcatttggtga---agtattgatagacctataaaaaggatatagttcatacctaacattacagctaggaaaaaaaacc 47802  T
Q  325 ctccctcccacctttccatcacaactctttgaaactttctcaatagcactactgagacagtttctgcaatcattaggcgacaaatccggcgtgcactgag 424  Q
     |||| |||  |||||||||| ||  ||  | ||     ||||||||| ||  ||||||| |||||||||  ||||| ||||| || |||||||||||||    
T  47801 atcccaccctgctttccatcaaaaagctgagcaagaaaatcaatagcagtatagagacaggttctgcaattgttaggagacaagtctggcgtgcactgag 47702  T
Q  425 ctagacagtaaagggtctgattttccgaatcttgtgcttctt 466  Q
    ||||||||||||||||||| |||| |||| || |||||||||    
T  47701 ctagacagtaaagggtctgttttttcgaaactcgtgcttctt 47660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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