View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16435_low_24 (Length: 292)
Name: NF16435_low_24
Description: NF16435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16435_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 18 - 287
Target Start/End: Complemental strand, 163300 - 163031
Alignment:
| Q |
18 |
cgatttaggtatgtttattgaacctttcttcttcgcgattatttcttggttattcgtatgaaccctaatcgttttgttaattgaattatcctgcttcgtc |
117 |
Q |
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| T |
163300 |
cgatttaggtatgtttattgaacctttcttcttcgcgattatttcttggttattcgtatgaaccctaatcgttttgttaattgaattatcctgcttcgtc |
163201 |
T |
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| Q |
118 |
atttcttaatttgatttttctattttgtgattgtgctacttgtagctgggtgggtgggtgtatgcgttaaaatgattcatttgtatagcttcttaccgcc |
217 |
Q |
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| T |
163200 |
atttcttaatttgatttttctattttgtgattgtgctacttgtagctgggtgggtgggtgtatgcgttaaaatgattcatttgtatagcttcttaccgcc |
163101 |
T |
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| Q |
218 |
gcaatataatgaatactgtaatagtagtaacgaaagcaagtttagtttgttaaaagtttgttcccctttg |
287 |
Q |
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| T |
163100 |
ggaatataatgaatactgtaatagcagtaacgaaagcaagtttagtttgttaaaagtttgttcctctttg |
163031 |
T |
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