View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16438_low_7 (Length: 432)
Name: NF16438_low_7
Description: NF16438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16438_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 18 - 413
Target Start/End: Original strand, 9199658 - 9200053
Alignment:
| Q |
18 |
tggatcaggttttgtaatatcaccaatttcttccattgaacaattagcttcagcctcaacaaaaagagcaccttctccagtacaatccacaatcagctta |
117 |
Q |
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| T |
9199658 |
tggatcaggttttgtaatatcaccaatttcttccattgaacaattagcttcagcctcaacaaaaagagcaccttctccagtacaatccacaatcagctta |
9199757 |
T |
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| Q |
118 |
ccctctgagcttatacttaatctcccagcaagagggtaataatgcacaagaacattcttcaatgcatccttaatcacttcacaagcattctcatttccct |
217 |
Q |
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| T |
9199758 |
ccctctgagcttatacttaatctcccagcaagagggtaataatgcacaagaacattcttcaatgcatccttaatcacttcacaagcattctcatttccct |
9199857 |
T |
|
| Q |
218 |
tctcttgatttttgaaacaataaacagttctaacaattacagcaatgttttgatcaaggtttgataggaaatacattcctttctttgtttcttcagatgg |
317 |
Q |
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| T |
9199858 |
tctcttgatttttgaaacaataaacagttctaacaattacagcaatgttttggtcaaggtttgataagaaatacattcctttctttgtttcttcagatgg |
9199957 |
T |
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| Q |
318 |
tggaacaagtgttggttcacttgttagctttacattaatttgtttgaagccattttcataattagaattttccatctctaaaaattcttgattaat |
413 |
Q |
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| T |
9199958 |
tggaacaagtgctggttcacttgttagctttacattaatttgtttgaagccattttcataattagaattttccatctcaaacacttcttgattaat |
9200053 |
T |
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