View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1643_high_128 (Length: 237)
Name: NF1643_high_128
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1643_high_128 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34214615 - 34214836
Alignment:
| Q |
1 |
tgcttaaggatcgagtgagccctacacttctccctctaaaatgttcatgacgacaaataattattccacaggttgaatcaataacttttagaagtgaact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34214615 |
tgcttaaggatcgagtgagccctacacttctccctctaaaatgttcatgacgacaaataattattccacaggttgaatcaataacttttagaagtgaact |
34214714 |
T |
|
| Q |
101 |
ttaaaacatggtaagcgttcactactagaggttgatattagatacaacttttctttaaacaaatactttatagtacctctaaataagagaacaactctta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
34214715 |
ttaaaacatggtaagcgttcactactagaggttgatattagatacaacttttctttaaacaaatactttatggtacctctaaataagagaacaactctta |
34214814 |
T |
|
| Q |
201 |
gattgtttgacatcaaataatt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
34214815 |
gattgtttgacatcaaataatt |
34214836 |
T |
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