View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1643_high_138 (Length: 233)
Name: NF1643_high_138
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1643_high_138 |
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Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31607643 - 31607863
Alignment:
| Q |
1 |
tttagtcatgcatagaataaaatatattaattatagttgtgtatattttcaataatgcaaggatgtgcaaaatgatgattttgtagaatattttcggaag |
100 |
Q |
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| T |
31607643 |
tttagtcatgcatagagtaaaatatattaattatagttgtgtatattttcaataatgcaaggatgtgcaaaatgatgattttgtagaatatttttggaag |
31607742 |
T |
|
| Q |
101 |
actagctagttatattaatttgtgcacgagggtgttgagtatatgttacactatatattagtatttcaatattaataattaatttaannnnnnnnnctat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31607743 |
actagctagttatattaatttgtgcacgagggtgttgagtatatgttacactatatattagtatttcaatattaataattaatttaatttttttttctat |
31607842 |
T |
|
| Q |
201 |
gatcctgtccaaccaccttca |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
31607843 |
gatcctgtccaaccaccttca |
31607863 |
T |
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