View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1643_high_21 (Length: 460)

Name: NF1643_high_21
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1643_high_21
NF1643_high_21
[»] chr7 (50 HSPs)
chr7 (16-437)||(14741159-14741580)
chr7 (244-433)||(4639824-4640013)
chr7 (244-433)||(37915855-37916026)
chr7 (244-394)||(37328315-37328465)
chr7 (244-390)||(44256406-44256552)
chr7 (248-394)||(40460361-40460507)
chr7 (245-394)||(42610579-42610728)
chr7 (244-394)||(510054-510204)
chr7 (244-394)||(12740778-12740928)
chr7 (244-394)||(18838818-18838968)
chr7 (282-380)||(21024065-21024163)
chr7 (241-378)||(26201794-26201932)
chr7 (244-394)||(28342719-28342869)
chr7 (244-394)||(29893380-29893530)
chr7 (244-394)||(33891881-33892031)
chr7 (244-394)||(39028495-39028645)
chr7 (244-394)||(8675739-8675890)
chr7 (285-380)||(14732298-14732393)
chr7 (279-394)||(29585957-29586072)
chr7 (244-390)||(7993565-7993711)
chr7 (244-394)||(29614442-29614592)
chr7 (244-394)||(39784515-39784665)
chr7 (311-392)||(23017020-23017101)
chr7 (284-378)||(11735194-11735289)
chr7 (244-391)||(28034498-28034645)
chr7 (279-382)||(48136887-48136990)
chr7 (244-394)||(23101699-23101849)
chr7 (282-380)||(34656604-34656702)
chr7 (282-380)||(35313556-35313654)
chr7 (244-394)||(37972524-37972674)
chr7 (244-394)||(44121580-44121730)
chr7 (310-394)||(30823112-30823196)
chr7 (244-394)||(3023342-3023492)
chr7 (275-384)||(16709427-16709534)
chr7 (275-384)||(17683663-17683770)
chr7 (284-394)||(41827776-41827886)
chr7 (325-394)||(21067869-21067938)
chr7 (244-369)||(27148806-27148931)
chr7 (244-349)||(43172115-43172220)
chr7 (244-360)||(32884179-32884295)
chr7 (306-380)||(19594233-19594307)
chr7 (311-394)||(47067185-47067268)
chr7 (282-380)||(38910480-38910578)
chr7 (295-380)||(6268513-6268598)
chr7 (305-394)||(21486164-21486253)
chr7 (305-369)||(33497107-33497171)
chr7 (244-339)||(33383082-33383177)
chr7 (284-380)||(1254471-1254567)
chr7 (295-360)||(36415080-36415145)
chr7 (282-359)||(37392648-37392725)
[»] chr5 (29 HSPs)
chr5 (16-243)||(17584811-17585037)
chr5 (244-433)||(7125115-7125305)
chr5 (244-433)||(28623118-28623307)
chr5 (244-433)||(37798071-37798259)
chr5 (244-413)||(5651158-5651327)
chr5 (282-380)||(2675078-2675176)
chr5 (244-394)||(4240108-4240258)
chr5 (244-394)||(4549900-4550050)
chr5 (244-392)||(1460790-1460938)
chr5 (282-380)||(21238763-21238861)
chr5 (244-394)||(37014264-37014414)
chr5 (244-394)||(39852780-39852930)
chr5 (287-380)||(33892846-33892939)
chr5 (244-394)||(13926341-13926491)
chr5 (244-378)||(16548850-16548985)
chr5 (244-394)||(5949522-5949671)
chr5 (245-394)||(40013347-40013496)
chr5 (255-394)||(29716781-29716920)
chr5 (283-374)||(34909592-34909683)
chr5 (244-394)||(13999736-13999886)
chr5 (246-360)||(15672705-15672819)
chr5 (282-360)||(25868798-25868876)
chr5 (284-379)||(16497741-16497836)
chr5 (276-378)||(29758699-29758801)
chr5 (322-394)||(1151933-1152005)
chr5 (287-333)||(24258534-24258580)
chr5 (305-379)||(31913520-31913594)
chr5 (283-380)||(16800729-16800825)
chr5 (327-380)||(19223054-19223107)
[»] chr2 (45 HSPs)
chr2 (244-437)||(18899875-18900068)
chr2 (244-386)||(15224191-15224333)
chr2 (244-394)||(28739936-28740086)
chr2 (284-380)||(13898477-13898573)
chr2 (284-380)||(14039094-14039190)
chr2 (244-391)||(6224222-6224369)
chr2 (282-380)||(38413458-38413556)
chr2 (283-380)||(3991773-3991870)
chr2 (244-394)||(31847208-31847359)
chr2 (244-394)||(13833061-13833211)
chr2 (244-394)||(18177681-18177831)
chr2 (282-380)||(19948537-19948635)
chr2 (244-394)||(25288573-25288723)
chr2 (275-391)||(40829628-40829744)
chr2 (244-394)||(7027313-7027463)
chr2 (244-394)||(10657840-10657990)
chr2 (244-394)||(28844995-28845145)
chr2 (287-380)||(11153354-11153447)
chr2 (283-380)||(33262853-33262950)
chr2 (283-392)||(35404311-35404420)
chr2 (244-391)||(379340-379487)
chr2 (244-394)||(2308704-2308854)
chr2 (274-392)||(3575281-3575399)
chr2 (305-394)||(18727637-18727726)
chr2 (281-390)||(33136063-33136172)
chr2 (287-380)||(41978841-41978934)
chr2 (245-380)||(43304976-43305111)
chr2 (283-378)||(15926378-15926474)
chr2 (244-392)||(34342199-34342347)
chr2 (311-394)||(38295708-38295791)
chr2 (311-394)||(43825317-43825400)
chr2 (282-360)||(12877685-12877763)
chr2 (244-394)||(26789195-26789345)
chr2 (311-380)||(45161137-45161206)
chr2 (262-378)||(3858427-3858544)
chr2 (284-378)||(32293914-32294008)
chr2 (311-394)||(43078967-43079050)
chr2 (328-379)||(43318766-43318817)
chr2 (305-378)||(32242211-32242285)
chr2 (295-380)||(24025860-24025945)
chr2 (288-372)||(37810895-37810979)
chr2 (286-380)||(30850271-30850364)
chr2 (244-348)||(214945-215049)
chr2 (343-394)||(3464111-3464162)
chr2 (283-320)||(43318813-43318850)
[»] chr3 (45 HSPs)
chr3 (244-433)||(49296077-49296266)
chr3 (244-433)||(8598620-8598810)
chr3 (243-433)||(53835922-53836112)
chr3 (283-433)||(22489435-22489585)
chr3 (244-392)||(21386476-21386624)
chr3 (244-394)||(48379558-48379708)
chr3 (276-391)||(4962724-4962839)
chr3 (282-380)||(9818568-9818666)
chr3 (244-394)||(26107737-26107887)
chr3 (244-394)||(37455255-37455405)
chr3 (244-390)||(51737333-51737479)
chr3 (244-390)||(52810766-52810912)
chr3 (245-394)||(7437561-7437710)
chr3 (244-369)||(7665552-7665677)
chr3 (274-394)||(33693247-33693367)
chr3 (283-394)||(49458358-49458469)
chr3 (249-394)||(20833310-20833455)
chr3 (282-394)||(16155163-16155275)
chr3 (244-392)||(39038498-39038646)
chr3 (244-394)||(31645903-31646053)
chr3 (244-394)||(50761742-50761892)
chr3 (244-394)||(54629259-54629409)
chr3 (282-378)||(25049870-25049967)
chr3 (283-394)||(50902951-50903062)
chr3 (244-394)||(23753031-23753181)
chr3 (244-394)||(40897539-40897689)
chr3 (244-382)||(52617626-52617764)
chr3 (244-393)||(44905498-44905647)
chr3 (244-392)||(18750051-18750199)
chr3 (244-378)||(45602422-45602557)
chr3 (246-392)||(17946638-17946780)
chr3 (276-366)||(43172920-43173010)
chr3 (244-394)||(36673794-36673944)
chr3 (282-380)||(37832571-37832669)
chr3 (311-394)||(34483740-34483823)
chr3 (283-380)||(30238499-30238597)
chr3 (282-380)||(49293802-49293900)
chr3 (311-380)||(47467415-47467484)
chr3 (282-380)||(40064277-40064375)
chr3 (274-392)||(42736298-42736416)
chr3 (283-380)||(19386895-19386991)
chr3 (245-345)||(21718452-21718552)
chr3 (325-380)||(27261435-27261490)
chr3 (295-337)||(2118484-2118526)
chr3 (284-365)||(53645332-53645413)
[»] chr8 (38 HSPs)
chr8 (244-433)||(19484176-19484365)
chr8 (244-394)||(8029830-8029980)
chr8 (244-394)||(31625718-31625868)
chr8 (244-392)||(10294982-10295130)
chr8 (244-391)||(9288138-9288285)
chr8 (244-394)||(26856515-26856665)
chr8 (244-394)||(18305617-18305767)
chr8 (244-390)||(19717519-19717665)
chr8 (244-394)||(42305245-42305395)
chr8 (274-394)||(32497981-32498101)
chr8 (244-378)||(6388131-6388265)
chr8 (244-394)||(14781773-14781923)
chr8 (244-394)||(16364116-16364266)
chr8 (245-378)||(17234676-17234810)
chr8 (244-394)||(18958368-18958518)
chr8 (244-394)||(39467159-39467309)
chr8 (244-394)||(43166317-43166467)
chr8 (282-380)||(28317075-28317173)
chr8 (244-394)||(44725432-44725582)
chr8 (283-380)||(41252164-41252261)
chr8 (247-394)||(43308149-43308296)
chr8 (245-363)||(12522528-12522646)
chr8 (289-382)||(27878636-27878729)
chr8 (289-382)||(28018817-28018910)
chr8 (282-382)||(27915580-27915680)
chr8 (282-382)||(27961999-27962099)
chr8 (282-378)||(24067105-24067202)
chr8 (283-378)||(37131291-37131387)
chr8 (287-380)||(1527908-1528001)
chr8 (274-394)||(7466761-7466881)
chr8 (328-394)||(12522423-12522489)
chr8 (298-379)||(4871114-4871195)
chr8 (310-391)||(26620338-26620419)
chr8 (285-392)||(41393958-41394065)
chr8 (245-378)||(7760770-7760904)
chr8 (295-380)||(33177851-33177936)
chr8 (326-378)||(35879722-35879775)
chr8 (354-391)||(42423261-42423298)
[»] chr4 (55 HSPs)
chr4 (244-433)||(29469124-29469313)
chr4 (244-413)||(8084170-8084339)
chr4 (284-433)||(42937364-42937513)
chr4 (243-391)||(29510061-29510209)
chr4 (244-394)||(49501174-49501324)
chr4 (244-394)||(49507239-49507389)
chr4 (282-394)||(50517192-50517304)
chr4 (275-394)||(23671366-23671485)
chr4 (244-392)||(41725523-41725671)
chr4 (249-378)||(871776-871905)
chr4 (282-380)||(6487324-6487422)
chr4 (244-394)||(29855926-29856076)
chr4 (282-391)||(46286708-46286817)
chr4 (283-380)||(51967277-51967374)
chr4 (282-379)||(56423982-56424079)
chr4 (244-394)||(32322476-32322627)
chr4 (279-394)||(49834475-49834590)
chr4 (244-394)||(30966984-30967134)
chr4 (283-380)||(9972773-9972870)
chr4 (244-378)||(55165486-55165621)
chr4 (244-394)||(5800374-5800524)
chr4 (244-394)||(23987607-23987756)
chr4 (284-394)||(26491115-26491225)
chr4 (244-394)||(27768474-27768624)
chr4 (245-394)||(28484306-28484456)
chr4 (244-366)||(32889857-32889979)
chr4 (282-360)||(33138799-33138877)
chr4 (244-394)||(48261488-48261638)
chr4 (283-380)||(8563364-8563461)
chr4 (282-415)||(24966490-24966623)
chr4 (244-393)||(54853118-54853267)
chr4 (274-394)||(5441842-5441962)
chr4 (244-394)||(37828071-37828221)
chr4 (282-380)||(40162788-40162886)
chr4 (244-394)||(50018602-50018752)
chr4 (244-394)||(51321266-51321416)
chr4 (282-380)||(54561218-54561316)
chr4 (283-380)||(26448631-26448728)
chr4 (244-387)||(54341552-54341695)
chr4 (285-379)||(23170738-23170832)
chr4 (244-394)||(32683669-32683818)
chr4 (328-394)||(37916283-37916349)
chr4 (283-380)||(21486515-21486612)
chr4 (283-359)||(25013446-25013522)
chr4 (288-360)||(41470352-41470424)
chr4 (282-380)||(14334393-14334491)
chr4 (282-360)||(46862941-46863019)
chr4 (284-333)||(40487712-40487761)
chr4 (297-380)||(21306311-21306394)
chr4 (283-333)||(3860237-3860287)
chr4 (283-333)||(3868994-3869044)
chr4 (337-394)||(29649646-29649703)
chr4 (341-380)||(26955394-26955433)
chr4 (325-379)||(29966401-29966455)
chr4 (326-378)||(24453923-24453976)
[»] chr1 (48 HSPs)
chr1 (244-433)||(26757597-26757786)
chr1 (244-433)||(41353403-41353592)
chr1 (244-433)||(4005049-4005239)
chr1 (244-433)||(1243256-1243445)
chr1 (244-433)||(8147299-8147488)
chr1 (244-433)||(9192006-9192196)
chr1 (244-433)||(51106874-51107064)
chr1 (243-433)||(11579050-11579231)
chr1 (245-395)||(3583544-3583694)
chr1 (275-394)||(47371564-47371683)
chr1 (244-394)||(45272976-45273126)
chr1 (244-394)||(25830888-25831038)
chr1 (244-394)||(48966480-48966630)
chr1 (244-413)||(5209338-5209507)
chr1 (244-394)||(49453049-49453200)
chr1 (244-394)||(5494737-5494887)
chr1 (244-394)||(15834673-15834823)
chr1 (244-394)||(46328395-46328545)
chr1 (282-380)||(7798520-7798618)
chr1 (284-394)||(32760088-32760198)
chr1 (284-378)||(1108374-1108468)
chr1 (244-394)||(6312985-6313135)
chr1 (244-390)||(8140876-8141022)
chr1 (244-394)||(25612501-25612651)
chr1 (245-391)||(28403938-28404084)
chr1 (244-394)||(29396073-29396223)
chr1 (247-378)||(52182311-52182443)
chr1 (290-380)||(33886863-33886953)
chr1 (290-380)||(33957297-33957387)
chr1 (282-380)||(34019139-34019237)
chr1 (281-380)||(34751575-34751674)
chr1 (245-378)||(49971599-49971734)
chr1 (280-394)||(18798897-18799011)
chr1 (274-392)||(35177201-35177319)
chr1 (244-394)||(38535785-38535935)
chr1 (244-394)||(38558003-38558153)
chr1 (297-394)||(42304489-42304586)
chr1 (274-375)||(49236974-49237075)
chr1 (275-379)||(15927312-15927416)
chr1 (279-394)||(48177081-48177197)
chr1 (244-394)||(51702004-51702154)
chr1 (281-390)||(49231453-49231562)
chr1 (275-415)||(25253506-25253646)
chr1 (282-360)||(18954485-18954563)
chr1 (305-374)||(3593289-3593358)
chr1 (262-369)||(27257872-27257979)
chr1 (244-360)||(9322181-9322297)
chr1 (325-394)||(29219611-29219680)
[»] chr6 (26 HSPs)
chr6 (244-433)||(1463620-1463810)
chr6 (244-433)||(6788061-6788251)
chr6 (244-433)||(10113730-10113919)
chr6 (245-413)||(3000202-3000370)
chr6 (244-394)||(16438667-16438817)
chr6 (274-392)||(31975643-31975761)
chr6 (283-380)||(31996251-31996348)
chr6 (244-391)||(2606856-2607003)
chr6 (282-378)||(8779586-8779682)
chr6 (244-392)||(31067841-31067989)
chr6 (244-382)||(14262090-14262228)
chr6 (285-379)||(21199556-21199650)
chr6 (244-382)||(7497507-7497645)
chr6 (244-394)||(30384706-30384856)
chr6 (244-394)||(31896046-31896196)
chr6 (244-392)||(4200095-4200243)
chr6 (244-389)||(34758726-34758871)
chr6 (282-358)||(28900863-28900939)
chr6 (244-290)||(1452072-1452118)
chr6 (282-360)||(7835387-7835465)
chr6 (311-375)||(31535068-31535132)
chr6 (305-394)||(12028997-12029086)
chr6 (323-394)||(34773873-34773944)
chr6 (341-394)||(24194471-24194525)
chr6 (284-369)||(13461374-13461459)
chr6 (295-377)||(21010883-21010965)
[»] scaffold1128 (1 HSPs)
scaffold1128 (244-394)||(894-1044)
[»] scaffold0042 (1 HSPs)
scaffold0042 (244-394)||(57706-57856)
[»] scaffold1504 (1 HSPs)
scaffold1504 (244-382)||(1276-1414)
[»] scaffold0543 (1 HSPs)
scaffold0543 (244-394)||(10934-11084)
[»] scaffold0246 (2 HSPs)
scaffold0246 (281-380)||(1365-1464)
scaffold0246 (284-333)||(25651-25700)
[»] scaffold0013 (1 HSPs)
scaffold0013 (244-382)||(89241-89379)
[»] scaffold0421 (1 HSPs)
scaffold0421 (311-380)||(1727-1796)
[»] scaffold0110 (1 HSPs)
scaffold0110 (254-394)||(39277-39417)
[»] scaffold0263 (2 HSPs)
scaffold0263 (244-297)||(486-539)
scaffold0263 (363-433)||(418-489)
[»] scaffold0573 (1 HSPs)
scaffold0573 (282-358)||(8855-8931)
[»] scaffold0383 (1 HSPs)
scaffold0383 (311-392)||(16673-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (311-392)||(20909-20990)
scaffold0152 (311-392)||(28811-28892)
[»] scaffold0347 (1 HSPs)
scaffold0347 (305-394)||(15132-15225)
[»] scaffold0433 (1 HSPs)
scaffold0433 (283-333)||(390-440)


Alignment Details
Target: chr7 (Bit Score: 410; Significance: 0; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 16 - 437
Target Start/End: Original strand, 14741159 - 14741580
Alignment:
Q  16 caatacaagagtcggggatcggatggaattcatgaagttttaggagacacacttagcttctaatctctttttaaaaacaaagcaaaaatatggatttcta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741159 caatacaagagtcggggatcggatggaattcatgaagttttaggagacacacttagcttctaatctctttttaaaaacaaagcaaaaatatggatttcta 14741258  T
Q  116 gaatatatgttgttacatgttttgacaatccagaatttctcaaaagtaatcaatagttgctctactcaatcgcttcaccgtaatatccaacccaaggact 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14741259 gaatatatgttgttacatgttttgacaatccagaatttctcaaaagtaatcaatagttgctctactcaatcgcttcaccgtaatatccaactcaaggact 14741358  T
Q  216 ctaaaattcttttagacatggttacagacaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgtt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741359 ctaaaattcttttagacatggttacagacaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgtt 14741458  T
Q  316 aactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14741459 aactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccg 14741558  T
Q  416 tttttgcaagtttactccagta 437  Q
    ||||||| ||||||||||||||    
T  14741559 tttttgcgagtttactccagta 14741580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 4640013 - 4639824
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  4640013 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctggta 4639914  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||    
T  4639913 aaatcggaaattttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttaccgtttttacgagtttactcc 4639824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 37916026 - 37915855
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||| ||||||| |||||||||||||||| | |||    
T  37916026 caatgttccacaaatcgcgtgtcaactcggcgagtttac---------gtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggta 37915936  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||| | ||||||||         ||||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||    
T  37915935 aaatcgaacagtttgac---------cgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccgtttttgtgagtttactcc 37915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 37328315 - 37328465
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| ||||  ||||  |||| ||| ||||||||||| ||||||| | |||| |||||||||||  ||||||||||||||||| |||    
T  37328315 caatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggta 37328414  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||| ||||||| |||||||||||| |||||||||||    
T  37328415 aaatcggaaggtttaacgtgtttgactgagttaacactcggtaaactcgtg 37328465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 390
Target Start/End: Complemental strand, 44256552 - 44256406
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||| || ||||||| |||| |||||  |||| ||| ||||||||||| ||||| | | |||| ||||||||||| |||||||||||||||||| |||    
T  44256552 caatgtcccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggta 44256453  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  44256452 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 44256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 394
Target Start/End: Complemental strand, 40460507 - 40460361
Alignment:
Q  248 gttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaat 347  Q
    ||||| ||||||| |||| |||||  |||| ||||||||||||||  ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||||||    
T  40460507 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaat 40460408  T
Q  348 cggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
     |||| |||| ||||||||||| |||||||||||||||| |||||||    
T  40460407 tggaaggtttaacgagtttgactgagttaacactcagtatactcgtg 40460361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 42610579 - 42610728
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||| | |||| |||||   ||||||||||| ||||||||||||||| | |||| |||||||| |  |||||||||| | ||||| ||||    
T  42610579 aatgttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaa 42610678  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| ||| ||||||||||||||||||||||||||||  |||||||||||    
T  42610679 aatcagaaggtttgacgagtttgaccgagttaacactgggtaaactcgtg 42610728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 510054 - 510204
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  510054 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 510153  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  510154 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 12740778 - 12740928
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| | ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| | ||| |||    
T  12740778 caatgttacgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggta 12740877  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| ||||||||||||||||  ||||| ||||| ||||| |||||    
T  12740878 aaattggaaggtttgacgagtttgactaagttagcactcggtaaagtcgtg 12740928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 18838818 - 18838968
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  18838818 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18838917  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| |||||||||||  |||||||| || |||||||||||    
T  18838918 aaattggaaggtttaacgagtttgactaagttaacattcggtaaactcgtg 18838968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 21024065 - 21024163
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||  ||||||||  ||||||||||||||||| ||||||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  21024065 ccgagtttacgattttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 21024163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 378
Target Start/End: Complemental strand, 26201932 - 26201794
Alignment:
Q  241 agacaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttcta 340  Q
    |||||||||||||||||||| |||| |||| | |||||||||||| ||||| | ||||||| | |||| ||||| ||||||||||||||||| |||  |     
T  26201932 agacaatgttccacaaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattg 26201833  T
Q  341 gtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
     ||||||||||| |||||||||||||||| |||||||||    
T  26201832 ctaaaatcggaatgtttgacgagtttgactcgagttaac 26201794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 28342719 - 28342869
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  28342719 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28342818  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  28342819 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 28342869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 29893380 - 29893530
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | |||| || | |||| ||||||||||| |||||||||||  ||||| ||     
T  29893380 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtg 29893479  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||| || |||| ||||||||||| |||||||||||| |||||||||||    
T  29893480 aaatcgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 29893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 33892031 - 33891881
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||| ||||||||| ||||||| | |||| |||||||||||  ||||||| ||| ||||| |||    
T  33892031 caatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggta 33891932  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| |||| |||||| ||||||||||||| ||||||||||    
T  33891931 aaattggaaggtttaacgaatttgactgagttaacactcaataaactcgtg 33891881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 39028495 - 39028645
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | ||||  |||| ||||| |||||||| ||| ||||| |||    
T  39028495 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggta 39028594  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
     ||| ||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  39028595 caattggaagatttaacgagtttgactgagttaacactcagtaaactcgtg 39028645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 8675739 - 8675890
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt- 342  Q
    ||||||| | ||||||| |||| |||||  |||| |||||||||| |||| ||||||| | |||| |||||||||||  ||||||||||| ||||| ||     
T  8675739 caatgtttcgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggta 8675838  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||| || |||||||||||||||| ||||||||||||  ||||||||||    
T  8675839 aaaatcgaaaggtttgacgagtttgactgagttaacactcgataaactcgtg 8675890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 14732393 - 14732298
Alignment:
Q  285 agtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||| | ||| | || ||||||||||||||||||||||||||||||| |||||    
T  14732393 agtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 14732298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 394
Target Start/End: Original strand, 29585957 - 29586072
Alignment:
Q  279 ttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||  |||||||||||| |||| | ||||||||| ||||||||    
T  29585957 ttaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggtaaaatcggaaggtttaatgagtttgactgagttaac 29586056  T
Q  379 actcagtaaactcgtg 394  Q
    |||| |||||||||||    
T  29586057 actcggtaaactcgtg 29586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 390
Target Start/End: Original strand, 7993565 - 7993711
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||| ||  | |||| || | |||| ||||||||||  |||||||||||| ||||| |||    
T  7993565 caatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggta 7993664  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  7993665 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 7993711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 29614592 - 29614442
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  29614592 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29614493  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| | || |||| ||||||||||| |||||||||||| |||||||||||    
T  29614492 aaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 29614442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 39784515 - 39784665
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  39784515 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 39784614  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  39784615 aaattggaaggtttaacgagtttgacagagttaacactcggtaaactcgtg 39784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 392
Target Start/End: Original strand, 23017020 - 23017101
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||| |||||||||    
T  23017020 gtgttaacttggaggtaaactcgatttctcgtaaaattggaagatttgacgagtttgaccgagttaacactcggtaaactcg 23017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 11735289 - 11735194
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||  ||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  11735289 gagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttgccgagtttgactcgagttaac 11735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 391
Target Start/End: Complemental strand, 28034645 - 28034498
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||||||||||||||| |||| || | |||| ||||||||||| || ||||| ||| ||||| |||    
T  28034645 caatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggta 28034546  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    |||| |||| |||| ||||||||||| |||||||||||  ||||||||    
T  28034545 aaattggaaggtttaacgagtttgactgagttaacacttggtaaactc 28034498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 382
Target Start/End: Complemental strand, 48136990 - 48136887
Alignment:
Q  279 ttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||  ||||| |||||||  ||| |||||||||||||||| ||||||||    
T  48136990 ttaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaac 48136891  T
Q  379 actc 382  Q
    ||||    
T  48136890 actc 48136887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 23101699 - 23101849
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| |||||||||||  ||||||| ||  ||||| |||    
T  23101699 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggta 23101798  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  23101799 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 23101849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 34656604 - 34656702
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| |||||||| ||||||||||| || ||||| ||||| ||| ||| | || |||||| ||||||||||||||||||||||||||||||    
T  34656604 ccgagtttacgtttttaggtggtaaaaacgtgtaaattcggaagtaaattcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 34656702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 35313556 - 35313654
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||| ||  |||| |||||||||||||||||||| ||| ||| | || |||||||||||||||| ||||||||||||||||||||    
T  35313556 ccgagtttacgtttttagatggcaaaaccgtgttaactcggaggtaaattcggtttttggtgaaatcggaaagtttgatgagtttgaccgagttaacac 35313654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 37972674 - 37972524
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| ||||    ||| ||||||||||||||| ||||||| | |||| ||||||||||| ||| |||||||  ||||| |||    
T  37972674 caatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggta 37972575  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| |||| |||||| |||||| ||||  |||||||||||    
T  37972574 aaatcggaaggtttaacgaatttgactgagttagcacttggtaaactcgtg 37972524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 44121730 - 44121580
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||| |||| ||||||| |||| |||||   ||| ||||||| ||||||| ||||||| | |||| ||||||||||  |||||||| ||| ||||| |||    
T  44121730 caatattccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggta 44121631  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| | || ||||||||||| |||||||||||  |||||||||||    
T  44121630 aaatcggaaggcttaacgagtttgactgagttaacacttggtaaactcgtg 44121580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 30823112 - 30823196
Alignment:
Q  310 cgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||  ||||||||||  |||||||||||| |||||||||||    
T  30823112 cgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggttcaacgagtttgattgagttaacactcggtaaactcgtg 30823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 3023342 - 3023492
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||| ||| ||||||| |||| |||||  |||| ||| |||||||| || ||||||| | |||| | ||||||||  |||||||| ||| |||||  ||    
T  3023342 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgata 3023441  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  3023442 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 3023492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 384
Target Start/End: Original strand, 16709427 - 16709534
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||||||||||||||| ||||||| | |||| |||| |||||| |||||||||||  ||  | ||||| |||||| ||||||| |||||||||||||    
T  16709427 gagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaaactcggaaggtttgacaagtttgaccgagt 16709524  T
Q  375 taacactcag 384  Q
    ||||||||||    
T  16709525 taacactcag 16709534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 384
Target Start/End: Original strand, 17683663 - 17683770
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||||||||||||||| ||||||| | |||| |||| |||||| |||||||||||  ||  | ||||| |||||| ||||||| |||||||||||||    
T  17683663 gagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaaactcggaaggtttgacaagtttgaccgagt 17683760  T
Q  375 taacactcag 384  Q
    ||||||||||    
T  17683761 taacactcag 17683770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 394
Target Start/End: Original strand, 41827776 - 41827886
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactca 383  Q
    |||||||||| ||||||| | |||| ||||||||||| |||||||||||  ||||| |||||||| |||  ||| || |||||||| ||||||||||||     
T  41827776 gagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatcagaagatttaacaagtttgactgagttaacactcg 41827875  T
Q  384 gtaaactcgtg 394  Q
    |||||||||||    
T  41827876 gtaaactcgtg 41827886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 21067869 - 21067938
Alignment:
Q  325 gtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  21067869 gtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 21067938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 369
Target Start/End: Original strand, 27148806 - 27148931
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| ||||||   |||||| ||||||||||| |||||||   |||| |||||||| |||||||||| ||| |||||   ||    
T  27148806 caatgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagcta 27148905  T
Q  344 aaatcggaaagtttgacgagtttgac 369  Q
    ||||| ||| ||||||||||||||||    
T  27148906 aaatcagaatgtttgacgagtttgac 27148931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 43172115 - 43172220
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||||||||||||||||| | |||||||   |||| | |||||||||||||||||||||||||||| |||    
T  43172115 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggta 43172214  T
Q  344 aaatcg 349  Q
    ||||||    
T  43172215 aaatcg 43172220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 32884179 - 32884295
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| || |||||||| |||||||||||  ||||| |||    
T  32884179 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggta 32884278  T
Q  344 aaatcggaaagtttgac 360  Q
    ||||||||| |||||||    
T  32884279 aaatcggaaggtttgac 32884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 19594233 - 19594307
Alignment:
Q  306 aaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| |||| |||| |||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  19594233 aaaacgtgtaaactaggagataaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 19594307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 394
Target Start/End: Original strand, 47067185 - 47067268
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||| ||| |||| ||||||||| ||||||| | || |||| ||||||||||| |||||||||||| |||||||||||    
T  47067185 gtgttaactctgagataaaatcgatttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 47067268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 38910480 - 38910578
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| ||||||| ||||| ||  || ||||||| |||||| |||||| |||| ||| | || |||||||||||||||||||| ||||||||||||||||    
T  38910480 ccgaatttacgtttttagatggcaagaacgtgtaaactcgaaggtaagctcggtttttggtgaaatcggaaagtttgacgagattgaccgagttaacac 38910578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 6268513 - 6268598
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||  ||||||||||||||||||| ||||||| | ||| | || ||||  ||| |||||||||||||||||||||||||||    
T  6268513 tttaggtgtcaaaaacgtgttaactcggatgtaaactaggtttttggtgaaattagaatgtttgacgagtttgaccgagttaacac 6268598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 21486164 - 21486253
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||||||||| | |||||||||||| || | |||||||  ||| |||||| |||||||| ||||||||||||| |||||||||||    
T  21486164 aaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggtttgatgagtttgatcgagttaacactcggtaaactcgtg 21486253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 33497171 - 33497107
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac 369  Q
    |||| ||||| ||||||||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  33497171 aaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgacgagtttgac 33497107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 339
Target Start/End: Original strand, 33383082 - 33383177
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttct 339  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| |||| |||||| ||| |||||||| |||||    
T  33383082 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttct 33383177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 380
Target Start/End: Complemental strand, 1254567 - 1254471
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||  ||||||||  |||||  | |||| ||| ||||||||||||||| | || ||||||||  |||||| ||||||||||||||||||||    
T  1254567 gagtttacgattttaggtgtcaaaaattttttaaatcgaaggtaaactcgatttttggtgaaatcggactgtttgatgagtttgaccgagttaacac 1254471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 36415145 - 36415080
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||| |||| |||||  ||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  36415145 tttaagtgccaaaaaattgttaactcggagataaactcgatttttagtgaaatcggaaaatttgac 36415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 37392725 - 37392648
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttga 359  Q
    |||||||||||| ||||||||  |||||| ||| ||||||||| |||||| ||||| | || ||||| ||||||||||    
T  37392725 ccgagtttacgtttttaggtggcaaaaacatgtaaactcggagataaacttgatttttggtgaaatcagaaagtttga 37392648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 17585037 - 17584811
Alignment:
Q  16 caatacaagagtcggggatcggatggaattcatgaagttttaggagacacacttagcttctaatctctttttaaaaacaaagcaaaaatatggatttcta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17585037 caatacaagagtcggggatcggatggaattcatgaagttttaggagacacacttagcttctaatctctttttaaaaacaaagcaaaaatatggatttcta 17584938  T
Q  116 gaatatatgttgttacatgttttgacaatccagaatttctcaaaagtaatcaatagttgctctactcaatcgcttcaccgtaatatccaacccaaggact 215  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17584937 gaatatatgttg-tacatgttttgacaatccagaatttctcaaaagtaatcaatagttgctctactcaattgcttcaccgtaatatccaacccaaggact 17584839  T
Q  216 ctaaaattcttttagacatggttacaga 243  Q
    ||||||||||||||||||||||||||||    
T  17584838 ctaaaattcttttagacatggttacaga 17584811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 7125305 - 7125115
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7125305 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 7125206  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgt-ttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  7125205 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 7125115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 28623307 - 28623118
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  28623307 caatgttccacaaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggta 28623208  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28623207 aaattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 28623118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 37798259 - 37798071
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  |||||||||| |||||| |||    
T  37798259 caatgttccacaaatcg-gtgtcaactcggcgagtttaccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttctggta 37798161  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||  ||||||||||    
T  37798160 aaatcgaaaagtttgacgagtttgaccgagttaacactcggtaaactcgtgtgaaatcgggtgagtttactgtttttgtgagtttactcc 37798071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 244 - 413
Target Start/End: Complemental strand, 5651327 - 5651158
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| ||| |  |||||||| ||| ||||||||||||||| | |||| |||||||||||||||||||||||||||||| ||     
T  5651327 caatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 5651228  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttac 413  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  5651227 aaattgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 2675176 - 2675078
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||||    
T  2675176 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 2675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 4240258 - 4240108
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| | |||| |||||   ||| ||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||  ||||| |||    
T  4240258 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggta 4240159  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| |||||||||||  ||||||||||| |||||||||||    
T  4240158 aaatcggaaggtttaacgagtttgacaaagttaacactcggtaaactcgtg 4240108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 4550050 - 4549900
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||||||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  4550050 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 4549951  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||| |||| | |||||||||    
T  4549950 aaattggaaggtttaacgagtttgactgagttaatactctgcaaactcgtg 4549900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 392
Target Start/End: Complemental strand, 1460938 - 1460790
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||||||||||||||| ||||||| | ||||  |||||||||| |||||||||||| ||||| |||    
T  1460938 caatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggta 1460839  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||||| | || ||||||||||| |||||||||||| |||||||||    
T  1460838 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcg 1460790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 21238861 - 21238763
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| ||||||| ||||| ||  ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||    
T  21238861 ccgattttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgacgagtttgaccgagttaacac 21238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 37014264 - 37014414
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| | ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  37014264 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37014363  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| | || |||| |||||||||||||||||||||||| |||||||||||    
T  37014364 aaattgaaaggtttaacgagtttgaccgagttaacactcggtaaactcgtg 37014414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 39852780 - 39852930
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||||||| | |||    
T  39852780 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 39852879  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  39852880 aaattggaaggtttaacgagtttgacggagttaacactcggtaaactcgtg 39852930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 33892939 - 33892846
Alignment:
Q  287 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||||||||    
T  33892939 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttgatgaaatcggaaagtttgacgagtttgaccgagttaacac 33892846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 13926341 - 13926491
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  13926341 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 13926440  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| | |||||||||  ||||||||||| |||||||||||    
T  13926441 aaattggaaggtttaaggagtttgactaagttaacactcggtaaactcgtg 13926491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 16548985 - 16548850
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||| |||||| |||| |||||   ||||||| ||||||||||| ||||||| | |||| ||||| ||||||||||||||||| |||||| |||    
T  16548985 caatgttccataaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctggta 16548886  T
Q  344 aaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||| || ||||||||| |||||| |||||||||    
T  16548885 aaatcgaaatgtttgacgaatttgactcgagttaac 16548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 5949522 - 5949671
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| || | |||||  |||| ||| | ||||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  5949522 caatgttccgcaaatcgagtattaactctccgagattatc-agtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5949620  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||| ||||    
T  5949621 aaattggaaggtttaacgagtttgactgagttaacactcggtaaacacgtg 5949671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 40013496 - 40013347
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||||| |||| |||||  |||| ||||||||||||| | |||| ||   |||| ||||||||||| |||||||| ||| ||||| ||||    
T  40013496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 40013397  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||| |||| |||| || || ||||| |||||||||||| |||||||||||    
T  40013396 aattggaaggtttaacaagattgactgagttaacactcggtaaactcgtg 40013347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 394
Target Start/End: Complemental strand, 29716920 - 29716781
Alignment:
Q  255 aaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaag 354  Q
    |||||| |||| |||||  | ||||||| |||||||||| |||||||   |||| |||||||||||| ||||||||| ||||||| |||||||| ||| |    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaagg 29716821  T
Q  355 tttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||||| || || || ||||||  |||||||||||    
T  29716820 tttgacgagttggatcgggtgaacacttggtaaactcgtg 29716781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 34909592 - 34909683
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||||||| ||||||||  ||||||||||||| ||||||||||||||| | | | || |||||||||||||||| ||||||||||||||    
T  34909592 cgagtttacgtttttaggtggcaaaaacgtgttaattcggaggtaaactcggtctttggtgaaatcggaaagtttgaggagtttgaccgagt 34909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 13999886 - 13999736
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| |||  ||||| || | ||||||| | |||| ||||||||||  ||| |||| ||| ||||| |||    
T  13999886 caatgttccgcaaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggta 13999787  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  13999786 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 13999736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 15672819 - 15672705
Alignment:
Q  246 atgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaa 345  Q
    ||||||||||||||  |||| |||||| ||||||||| ||||||| || ||||||| |||||| ||||| |||||  || |||||| ||||| | |||||    
T  15672819 atgttccacaaatcaagtgttaactcgccgagtttactgagtttatgtttttaggtactaaaatcgtgtcaactcaaagataaacttgatttatggtaaa 15672720  T
Q  346 atcggaaagtttgac 360  Q
    ||||||| |||||||    
T  15672719 atcggaatgtttgac 15672705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 25868798 - 25868876
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    ||||||||| || ||||||||  ||||||||||||||||||||||||||||| ||| | || |||||||||||||||||    
T  25868798 ccgagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 25868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 379
Target Start/End: Complemental strand, 16497836 - 16497741
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    |||||||||| ||||||||| ||||| ||||||| ||  || |||||||||||| |  | ||||||||| ||||||||||||||||||| ||||||    
T  16497836 gagtttacgtttttaggtgccaaaaatgtgttaattcaaagataaactcgatttttgctgaaatcggaatgtttgacgagtttgaccgacttaaca 16497741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 378
Target Start/End: Original strand, 29758699 - 29758801
Alignment:
Q  276 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagt 374  Q
    |||||| ||||||||||| |||||||   |||| |||||||||||||||||| | | ||||||| || ||||||||| |||||||||||||||| |||||    
T  29758699 agtttatcgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggt-aaatcggaatgtttgacgagtttgactcgagt 29758797  T
Q  375 taac 378  Q
    ||||    
T  29758798 taac 29758801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 1152005 - 1151933
Alignment:
Q  322 gaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| || ||| ||||| ||||||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  1152005 gaggtgaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 1151933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 24258580 - 24258534
Alignment:
Q  287 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    ||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  24258580 tttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcg 24258534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Original strand, 31913520 - 31913594
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    ||||| ||||||||| ||||||||||||||||| | || |||||| || ||| | ||| ||||| ||||||||||    
T  31913520 aaaaatgtgttaacttggaggtaaactcgatttttggtgaaatcgaaatgttcgtcgaatttgatcgagttaaca 31913594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 16800729 - 16800825
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| | |||||||| |||||| || |||||| | |||| |||||| ||| | || ||||  ||| ||||||||||||||||||| |||||||    
T  16800729 cgagtttacatttttaggtgttaaaaatgttttaacttgaaggtgaactcggttt-tggtgaaattagaatgtttgacgagtttgaccgacttaacac 16800825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 19223054 - 19223107
Alignment:
Q  327 aaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| ||| | || ||||||||||||||||||||| | |||||||||||||    
T  19223054 aaactcggtttttggtgaaatcggaaagtttgacgagtgtaaccgagttaacac 19223107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 244 - 437
Target Start/End: Complemental strand, 18900068 - 18899875
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18900068 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 18899969  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactccagta 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  18899968 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactccagta 18899875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 386
Target Start/End: Original strand, 15224191 - 15224333
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||| |||||||||||||||||| ||     
T  15224191 caatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggtg 15224290  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagta 386  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  15224291 aaatcgaaaagtttgacgagtttgaccgaattaacactcagta 15224333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 28740086 - 28739936
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| |||||||||||| || ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  28740086 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28739987  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  28739986 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 28739936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 13898477 - 13898573
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| |||||| |  ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  13898477 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 13898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 14039094 - 14039190
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| |||||| |  ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  14039094 gagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 14039190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 391
Target Start/End: Complemental strand, 6224369 - 6224222
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||||| ||||||| |  ||| |||||||||||  |||| |||||| |||||||||    
T  6224369 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagta 6224270  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    ||||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  6224269 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaactc 6224222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 38413556 - 38413458
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  |||||||||| |||||||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  38413556 ccgagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 38413458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 3991773 - 3991870
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| | || |||||| ||||||||||||||||||||||||||||||    
T  3991773 cgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 3991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 31847359 - 31847208
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagttt-acgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 342  Q
    ||||||||| ||||||| |||| |||||  |||||||| ||||||| |||| |||||||  ||||| | || |||||||||||||||||| ||||||  |    
T  31847359 caatgttcctcaaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctgat 31847260  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||| ||| |||||||||||| |||||| ||||||||| |||||||||||    
T  31847259 aaaatcagaaggtttgacgagttcgaccgaattaacactcggtaaactcgtg 31847208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 13833211 - 13833061
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| |  ||| |||||  |||| ||| ||||||||||| ||||||| | |||| ||||||||||| ||||||||||| ||||||||||    
T  13833211 caatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagta 13833112  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| |||  ||| || |||||||| |||||||||||| |||||||||||    
T  13833111 aaatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtg 13833061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 18177681 - 18177831
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  18177681 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18177780  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  18177781 aaattggaaagtttaacgagtttgacagagttaacactcggtaaactcgtg 18177831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 19948537 - 19948635
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| | ||||||||  ||||||||||||||||||||||||||||  ||| | || |||||||||||||||||||||||||||||||||||||    
T  19948537 ccgagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 19948635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 25288573 - 25288723
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| |||||||  | | |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||||||| |||||||||    
T  25288573 caatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 25288672  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||| ||||||  ||||||||||||  ||||||||||    
T  25288673 aaatcggaaggtttaacgggtttgattgagttaacactcgataaactcgtg 25288723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 391
Target Start/End: Original strand, 40829628 - 40829744
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||||||||| ||| | |||||||   |||| |||||||||||||||||||||||| ||||| ||||||| | || ||||||||| |||||||||||    
T  40829628 gagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggtaaaatagaaaggtttgacgaatttgaccgagt 40829727  T
Q  375 taacactcagtaaactc 391  Q
    ||||||||| |||||||    
T  40829728 taacactcaataaactc 40829744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 7027313 - 7027463
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  7027313 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 7027412  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| | || |||| ||||||||||| |||||||||||| |||||||||||    
T  7027413 aaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 7027463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 10657840 - 10657990
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| |||||   ||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| ||||||| | |||    
T  10657840 caatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 10657939  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| |||||||| || ||||||||||||  ||||||||||    
T  10657940 aaattggaaggtttaacgagtttaactgagttaacactcgataaactcgtg 10657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 28844995 - 28845145
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||| ||| ||||||| |||| |||||  |||| ||| |||||||| || ||||||| | |||| ||||||||||| |||||||| ||| |||||  ||    
T  28844995 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 28845094  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  28845095 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 28845145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 11153447 - 11153354
Alignment:
Q  287 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||  | ||||| |||||||||||||||||||||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcgagatgtttggcgagtttgaccgagttaacac 11153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 33262853 - 33262950
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  |||||||||| |||||| ||||||||||| ||| | || |||||||||||||||||||||||||| ||||||||||    
T  33262853 cgagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgactgagttaacac 33262950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 35404420 - 35404311
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||||| ||||||| |  ||| ||||||||||  |||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  35404420 cgagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacactc 35404321  T
Q  383 agtaaactcg 392  Q
      ||||||||    
T  35404320 gataaactcg 35404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 379340 - 379487
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||||||| ||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||| |  ||    
T  379340 caatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgata 379439  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    ||||||||| | || ||||||||||| |||||||||||| ||||||||    
T  379440 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactc 379487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 2308854 - 2308704
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| || |||||| |||| |||||| ||||||||   | ||||||| |||| || | |||| |||||||||||||||||||| ||| ||| | |||    
T  2308854 caatgtttcataaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggta 2308755  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||  |||||||||| ||||||||| ||||||||||| ||||| |||||    
T  2308754 aaatcaaaaagtttgacaagtttgaccaagttaacactcggtaaaatcgtg 2308704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 392
Target Start/End: Original strand, 3575281 - 3575399
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||| |||| |||||||||| ||||||| | |||| | ||||||||| |||||||| ||| ||||| ||||||| |||| |||| ||||||||||| |||    
T  3575281 cgagattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgag 3575380  T
Q  374 ttaacactcagtaaactcg 392  Q
    ||||||||| |||||||||    
T  3575381 ttaacactcggtaaactcg 3575399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 18727726 - 18727637
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||| |||||||||||| ||  ||||||||||    
T  18727726 aaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtg 18727637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 33136063 - 33136172
Alignment:
Q  281 accgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| || ||||||| | |||| ||||||||||| |||||||||||||||||| ||| |||||||| |||| |||| ||||||  |||||||||    
T  33136063 accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtataatcggaaggtttaacgaatttgactaagttaacac 33136162  T
Q  381 tcagtaaact 390  Q
    || |||||||    
T  33136163 tcggtaaact 33136172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 41978841 - 41978934
Alignment:
Q  287 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| ||||||||  |||||| |||||| ||||||||||||||| ||| |  | |||||||||||||||||||||||||||||||||||||    
T  41978841 tttacgtttttaggtggcaaaaacatgttaattcggaggtaaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacac 41978934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 245 - 380
Target Start/End: Complemental strand, 43305111 - 43304976
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtt-taggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||| |||| || ||| |||||||||||||||| ||| || |||||   |||   ||||||||||| |||||||||||||| |||||     
T  43305111 aatgttccacaaatcgagtgttaattcgtcgagtttaccgagttttcgttttataggtatcaaactagtgttaactcg-aggtaaactcgattactagtg 43305013  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| |||||||||||||| |||||| ||||||||||    
T  43305012 aaataggaaagtttgacgactttgactgagttaacac 43304976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 378
Target Start/End: Original strand, 15926378 - 15926474
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    ||||||||||| ||| ||| | |||| ||||| ||||||||||| |||||||||||| ||||||||| || |||||||||||||||| |||||||||    
T  15926378 cgagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgacgagtttgactcgagttaac 15926474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 34342199 - 34342347
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||||||||||||||||||| ||||||| | |||  | ||||| | |  ||||||||||| ||||| |||    
T  34342199 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggta 34342298  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    || |||||| |||||||||||| ||  ||||||||| || |||||||||    
T  34342299 aactcggaaggtttgacgagttagattgagttaacagtcggtaaactcg 34342347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 38295791 - 38295708
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||| ||||||| ||| | | ||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  38295791 gtgttaattcggaggaaaatttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtg 38295708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 394
Target Start/End: Original strand, 43825317 - 43825400
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||| |||||||| ||| ||||| ||||||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  43825317 gtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 43825400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 12877685 - 12877763
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| |  | |||||||||||||||||    
T  12877685 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgac 12877763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 26789195 - 26789345
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| || ||  |||| ||| |||||| || | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  26789195 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 26789294  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||   ||||||||||    
T  26789295 aaattggaaggtttaacgagtttgactgagttaacacttgataaactcgtg 26789345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 45161206 - 45161137
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| |||||||||||||||||| ||| | || |||||||||||||||||||||| ||||||||||||||    
T  45161206 gtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttcgaccgagttaacac 45161137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 378
Target Start/End: Complemental strand, 3858544 - 3858427
Alignment:
Q  262 gtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacg 361  Q
    |||| |||||| |||||| ||||| ||||||| |||| |||  ||||  |||| |||| | ||||||||||||||| | |||||||||||| ||||||||    
T  3858544 gtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatgtttgacg 3858445  T
Q  362 agtttgac-cgagttaac 378  Q
    ||||| || |||||||||    
T  3858444 agtttaactcgagttaac 3858427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 32293914 - 32294008
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||| ||| ||| | |||| |||||||| || || ||||||| ||||||| |||||||||||| |||||||||||||||| |||||||||    
T  32293914 gagtttacgttttt-ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgacgagtttgactcgagttaac 32294008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 394
Target Start/End: Original strand, 43078967 - 43079050
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||| |||||||||||| |||||  ||||||| ||| |||| ||||||||||  ||||||||||||  ||||||||||    
T  43078967 gtgttaactctgaggtaaactcggtttctgttaaaatccgaaggtttaacgagtttgattgagttaacactcgataaactcgtg 43079050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 43318817 - 43318766
Alignment:
Q  328 aactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    ||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  43318817 aactctatttttggtaaaatcggaaagtttgacgagtttgaccgagttaaca 43318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 32242285 - 32242211
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||| ||||||||||| |||||||||| ||||||| |||||||| ||| |||| ||||||||||| |||||||||    
T  32242285 aaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatcagaatgtttaacgagtttgactcgagttaac 32242211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 24025860 - 24025945
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||  ||||||||||||||| |||| |||||||| ||| | |||||||| ||| ||||||||| || ||| ||||||||||    
T  24025860 tttaggtgtcaaaaacgtgttaacttggagataaactcggtttttggtaaaatcagaatgtttgacgaattggactgagttaacac 24025945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 372
Target Start/End: Complemental strand, 37810979 - 37810895
Alignment:
Q  288 ttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccga 372  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||||| ||||| | || |||||  || |||||| ||||||||||||    
T  37810979 ttacgtttttagatgccaaaaacgtgttaaatcggaggtaaacttgatttttggtgaaatcataatgtttgatgagtttgaccga 37810895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 380
Target Start/End: Original strand, 30850271 - 30850364
Alignment:
Q  286 gtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||| ||||||||| |||| ||| | |||||||||||||| ||| ||| | ||||||||  |||| |||||  ||||||||||||||||||    
T  30850271 gtttacgtttttaggtgccaaaatcgtataaactcggaggtaaattcgttttttggtaaaatcataaag-ttgaccggtttgaccgagttaacac 30850364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 215049 - 214945
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| | |||| ||||   |||| ||||||| ||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| |||    
T  215049 caatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggta 214950  T
Q  344 aaatc 348  Q
    |||||    
T  214949 aaatc 214945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 3464111 - 3464162
Alignment:
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| |||| |||| | ||||||||| ||||||||||||||||||||||||    
T  3464111 aaaattggaaggtttaatgagtttgactgagttaacactcagtaaactcgtg 3464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 43318850 - 43318813
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactc 320  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  43318850 cgagtttacgtttttatgtgctaaaaacgtgttaactc 43318813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 49296077 - 49296266
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49296077 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 49296176  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  49296177 aaatcgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 49296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 8598620 - 8598810
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8598620 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8598719  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg-tttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  8598720 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 8598810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 243 - 433
Target Start/End: Original strand, 53835922 - 53836112
Alignment:
Q  243 acaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 342  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  53835922 acaatgttccacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggt 53836021  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||    
T  53836022 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcaagttaaccgtttttgcgagtttactcc 53836112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 433
Target Start/End: Complemental strand, 22489585 - 22489435
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||||||||||||||| ||||||||||||| || || ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  22489585 cgagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactc 22489486  T
Q  383 agtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||||  ||| ||| ||||||||||||||||||| || |||||||    
T  22489485 agtaaactcgtatgaagtcgagcgagtttaccgtttttgctaggttactcc 22489435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 392
Target Start/End: Complemental strand, 21386624 - 21386476
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||||||||||||||||| | |||||||   |||| ||||||||||  |||||||||||||||||| |||    
T  21386624 caatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggta 21386525  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  21386524 aaatcgaaaagtttgacgagtttgaccgagttgacactcggtaaactcg 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 48379558 - 48379708
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| |||||||| || |||||||||||||||||| |||    
T  48379558 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggta 48379657  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| | || ||||||||||| |||||||||||| |||||||||||    
T  48379658 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtg 48379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 276 - 391
Target Start/End: Complemental strand, 4962839 - 4962724
Alignment:
Q  276 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagtt 375  Q
    |||||| ||||||||||| |||||||   |||| |||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  4962839 agtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagtaaaatcgaaaggtttgacgagtttgaccgagtt 4962740  T
Q  376 aacactcagtaaactc 391  Q
    ||||||| ||||||||    
T  4962739 aacactcggtaaactc 4962724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 9818666 - 9818568
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||    
T  9818666 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 9818568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 26107737 - 26107887
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||  |||||  |||| ||| ||||||||||| ||||||| | |||| | ||||||||| |||||||||||||||||| |||    
T  26107737 caatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggta 26107836  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
     |||||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  26107837 caatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 26107887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 37455255 - 37455405
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| |||||||| |||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  37455255 caatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37455354  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||||||| ||||||||||    
T  37455355 aaattggaaggtttaacgagtttgactgagttaacactcactaaactcgtg 37455405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 390
Target Start/End: Complemental strand, 51737479 - 51737333
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||||||| |||||||||    
T  51737479 caatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 51737380  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  51737379 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 51737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 390
Target Start/End: Original strand, 52810766 - 52810912
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | ||||  |||||||||| ||||||||||||  |||| |||    
T  52810766 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggta 52810865  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  52810866 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 52810912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 7437710 - 7437561
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||||| |||| |||||  ||||||||| |||||||| ||||||||| | |||| ||||||||| ||||| |||||||| ||| | ||||    
T  7437710 aatgttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaa 7437611  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  7437610 aatcggaaggtatggtgagtttgaccgagttaacactcggtaaactcgtg 7437561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 369
Target Start/End: Original strand, 7665552 - 7665677
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||| ||| |||||| ||||||||| ||||| | | |||| |||||||||||||||||||||||||||| | |||    
T  7665552 caatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggta 7665651  T
Q  344 aaatcggaaagtttgacgagtttgac 369  Q
    |||||||||  |||||||||||||||    
T  7665652 aaatcggaatatttgacgagtttgac 7665677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 33693247 - 33693367
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    ||||||||||||||||| |  ||||  | | |||| |||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  33693247 cgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaaggtttgacgagtttgaccgag 33693346  T
Q  374 ttaacactcagtaaactcgtg 394  Q
    ||||||||| |||||||||||    
T  33693347 ttaacactcggtaaactcgtg 33693367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 49458358 - 49458469
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    |||||||||||||||||||   ||||  |||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||    
T  49458358 cgagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactc 49458457  T
Q  383 agtaaactcgtg 394  Q
    ||||||||||||    
T  49458458 agtaaactcgtg 49458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 249 - 394
Target Start/End: Original strand, 20833310 - 20833455
Alignment:
Q  249 ttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatc 348  Q
    |||| ||||||| |||| |||||   ||| ||| ||||||||||| ||||||| | |||| ||||||||||| |||||||||||  ||||| ||||||||    
T  20833310 ttccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatc 20833409  T
Q  349 ggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  20833410 ggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 20833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 16155163 - 16155275
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||| ||||||| ||||||| | |||| ||||||||||| |||||||||||| ||| |  |||||| |||| ||||||||||||||||||||||||||||    
T  16155163 ccgaatttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacact 16155262  T
Q  382 cagtaaactcgtg 394  Q
    |||||||||||||    
T  16155263 cagtaaactcgtg 16155275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 39038498 - 39038646
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||   ||| ||| ||| ||||||| ||||||| | ||||  |||||||||| |||||||||||| ||||| |||    
T  39038498 caatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggta 39038597  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||||| |||| |||||||||||  ||||||||||| |||||||||    
T  39038598 aaatcggaaggtttaacgagtttgactaagttaacactcggtaaactcg 39038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 31646053 - 31645903
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| | ||||||| |||| |||||  |||| |||||||| |||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  31646053 caatgtttcgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31645954  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| | ||||||||| |||||||||||| |||||||||||    
T  31645953 aaattggaaggtttaaagagtttgactgagttaacactcggtaaactcgtg 31645903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 50761892 - 50761742
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| | ||||||| ||     
T  50761892 caatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtg 50761793  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||  |||||||||||    
T  50761792 aaattggaaggtttaacgagtttgactgagttaacactaggtaaactcgtg 50761742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 54629259 - 54629409
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| | |||| |||||   ||| ||||||||||||||| ||||||| | |||| ||||||||||| ||||||||||||||||||  ||    
T  54629259 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgata 54629358  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||| || || |||| ||||||||||   |||||||||||||||||||||||    
T  54629359 aaagcgaaaggtttaacgagtttgattcagttaacactcagtaaactcgtg 54629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 378
Target Start/End: Original strand, 25049870 - 25049967
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||||| ||||||| | |||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  25049870 ccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttgatgagtttgactcgagttaac 25049967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 50903062 - 50902951
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||||| |||| || | |||| ||||||||||| |||||||||||| ||||| ||||||| |||| |||| ||||||||||| ||||||||||||    
T  50903062 cgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactc 50902963  T
Q  383 agtaaactcgtg 394  Q
     |||||||||||    
T  50902962 ggtaaactcgtg 50902951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 23753181 - 23753031
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| | ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||| | |||    
T  23753181 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggta 23753082  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| || |||||||| |||||||||||| |||||||||||    
T  23753081 aaattggaaggtttaaccagtttgactgagttaacactcggtaaactcgtg 23753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 40897539 - 40897689
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| || |||| |||| |||||  |||| ||||||| ||||||  ||||||| | |||| ||||||||||| |||||||| ||| |||||  ||    
T  40897539 caatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 40897638  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  40897639 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 40897689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 52617764 - 52617626
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||| ||| ||||||| ||||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  52617764 caatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 52617665  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||| |||| |||||||||||  |||||||||||    
T  52617664 aaatcggaaggtttaacgagtttgactaagttaacactc 52617626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 393
Target Start/End: Complemental strand, 44905647 - 44905498
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| |||||||||||||||  |||||| | |||| |||||||| || ||||||| |||| ||||| |||    
T  44905647 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggta 44905548  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgt 393  Q
    ||||| ||| | || |||| |||||| |||||||||||| ||||||||||    
T  44905547 aaatcagaaggcttaacgaatttgactgagttaacactcggtaaactcgt 44905498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 18750051 - 18750199
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||  |||| |||||||||| ||||||| | |||| | ||||||||| |||||||||||| ||||| |||    
T  18750051 caatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggta 18750150  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||| |||| | || ||||||||||| |||||||||||| |||||||||    
T  18750151 aaattggaaggcttaacgagtttgactgagttaacactcggtaaactcg 18750199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 45602557 - 45602422
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| ||| ||||| |||| |||||| |||||||||||| ||||||| ||| |||  |||||  |||| |||||| |||||||||| |||||| |||    
T  45602557 caatgtttcacgaatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggta 45602458  T
Q  344 aaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||| || |||||||||||||||| |||||||||    
T  45602457 aaatcgaaatgtttgacgagtttgactcgagttaac 45602422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 392
Target Start/End: Original strand, 17946638 - 17946780
Alignment:
Q  246 atgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaa 345  Q
    ||||||| ||||||| |||| || ||  |||| ||| ||||||||||| ||||||| | |||| | ||||||||| |||||||||||| ||||| |||||    
T  17946638 atgttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaa 17946737  T
Q  346 atcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||| |||| ||||||||    |||||||||||| |||||||||    
T  17946738 atcggaaggtttaacgagttt----gagttaacactcggtaaactcg 17946780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 43172920 - 43173010
Alignment:
Q  276 agtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagttt 366  Q
    |||||| |||||||| |||||||||| | |||| |||||| ||||||||||||||||||||||| ||||||||| || |||||| ||||||    
T  43172920 agtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaaaatcgaaaggtttgaagagttt 43173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 36673944 - 36673794
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| || ||  |||| ||| |||||| || | |||| || | |||| ||||||||||| |||||||| ||| ||||| |||    
T  36673944 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 36673845  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||||||  ||||||||||    
T  36673844 aaattggaaggtttaacgagtttgactgagttaacactcgataaactcgtg 36673794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 37832571 - 37832669
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  |||||||||| || |||||| ||||||   ||| | || ||||| |||||||||||||||||||||||||||||||    
T  37832571 ccgagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaacttagtttttggtgaaatcagaaagtttgacgagtttgaccgagttaacac 37832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 34483823 - 34483740
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||| |||||||| ||| ||||| |||||||  ||| |||| ||||||||||| |||||||||||| |||||||||||    
T  34483823 gtgttaactctgaggtaaaatcggtttctggtaaaatttgaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 34483740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 380
Target Start/End: Complemental strand, 30238597 - 30238499
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaa-cgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||||| | | ||| ||| |||| || || |||||| |||||||||||| |||||||    
T  30238597 cgagtttacgtttttaggtgcgaaaaaacgtgttaactcggaggtaaatttggtttttaggaaaaacgaaatgtttgatgagtttgaccgaattaacac 30238499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 49293802 - 49293900
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  |||||||| | || | | |  |||||||||||| | || ||||||||||||||||||||||||||||| |||||||    
T  49293802 ccgagtttacgtttttaggtggcaaaaacgtataaatttgaaaataaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgaattaacac 49293900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 47467484 - 47467415
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||||| ||| | || |||||| ||| ||||||||||||||||||||||||||    
T  47467484 gtgttaactcgaaggtaaactcggtttttggtgaaatcgaaaattttgacgagtttgaccgagttaacac 47467415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 40064277 - 40064375
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  |||||||||| |||| ||||||||| |   ||| | || |||||| |||||||||||| ||||||| |||||||||    
T  40064277 ccgagtttacgtttttaggtggcaaaaacgtgtaaacttggaggtaaatttagtttttggtgaaatcgaaaagtttgacgaatttgaccaagttaacac 40064375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 392
Target Start/End: Original strand, 42736298 - 42736416
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||||||| ||||||| ||| ||||| | | |||| |||||||||   ||| ||||||   ||||| ||||||||  |||||||||||||||||| ||||    
T  42736298 cgagtttatcgagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggtaaaatcaaaaagtttgacgagtttgatcgag 42736397  T
Q  374 ttaacactcagtaaactcg 392  Q
    |||||| || |||||||||    
T  42736398 ttaacattcggtaaactcg 42736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 380
Target Start/End: Complemental strand, 19386991 - 19386895
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  ||||| ||||||||||||| |||||||| |||  |  |||||| |||| || ||| ||||||||||||||||||||    
T  19386991 cgagtttacgtatttaggtgtcaaaaatgtgttaactcggatgtaaactcaattattgataaaattggaatgtctga-gagtttgaccgagttaacac 19386895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 345
Target Start/End: Complemental strand, 21718552 - 21718452
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    ||||||||| |||||| |||| |||||| ||| ||||| |||||||||| || || | | |||| ||||| |||||  || |||||||||||||||||||    
T  21718552 aatgttccaaaaatcgagtgttaactcgtcgattttactgagtttacgttttaagataccaaaatcgtgtcaactcaaagataaactcgatttctagtaa 21718453  T
Q  345 a 345  Q
    |    
T  21718452 a 21718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 27261435 - 27261490
Alignment:
Q  325 gtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||||| | || ||||||||||||||||||| |||||| ||||||||||    
T  27261435 gtaaactcgatttttggtgaaatcggaaagtttgacgaatttgactgagttaacac 27261490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 2118526 - 2118484
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgattt 337  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  2118526 tttaggtgcaaaaaacgtgttaactcgaaggtaaactcgattt 2118484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 53645413 - 53645332
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtt 365  Q
    ||||| |||| ||||||||  |||||||| | ||||| |||||||||||  ||| | || ||||||||||||||||||||||    
T  53645413 gagttaacgtttttaggtggcaaaaacgtataaactcagaggtaaactcagtttttggtgaaatcggaaagtttgacgagtt 53645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 5e-91; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 19484176 - 19484365
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19484176 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 19484275  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  19484276 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttacgagtttactcc 19484365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 8029980 - 8029830
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| |||||  |||||||| ||||||||||||||||||| | |||| ||||||||||| ||| |||||||||||||| |||    
T  8029980 caatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctggta 8029881  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  8029880 aaatcggaaggtttgacgagtttgaccgagttaacactcggtaaaatcgtg 8029830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 31625718 - 31625868
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | ||||  |||||||||| |||||||||||| ||||| |||    
T  31625718 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 31625817  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  31625818 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 31625868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 392
Target Start/End: Complemental strand, 10295130 - 10294982
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| |||||  |||| ||||||||||||||| ||||||| | | || ||||||||||| |||||||||||| ||||| |||    
T  10295130 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggta 10295031  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  10295030 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcg 10294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 391
Target Start/End: Complemental strand, 9288285 - 9288138
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  9288285 caatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9288186  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    |||| |||| |||| ||||||||||| |||||||||||||||| ||||    
T  9288185 aaattggaaggtttaacgagtttgactgagttaacactcagtatactc 9288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 26856515 - 26856665
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| ||||||||| |||| |||||  |||| |||||||||||| || | ||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  26856515 caatgttacacaaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 26856614  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| ||| |||| ||||||||||| |||||||||||| |||||||||||    
T  26856615 aaatcagaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 26856665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 18305767 - 18305617
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| | ||||||| |||| |||||  |||| |||||||| |||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  18305767 caatgttacgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18305668  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| | ||||||||| |||||||||||| |||||||||||    
T  18305667 aaattggaaggtttaaagagtttgactgagttaacactcggtaaactcgtg 18305617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 390
Target Start/End: Complemental strand, 19717665 - 19717519
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  19717665 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 19717566  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    |||| |||| |||| ||||| ||||| |||||||||||| |||||||    
T  19717565 aaattggaaggtttaacgagattgactgagttaacactcggtaaact 19717519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 42305395 - 42305245
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||  |||| ||||||||||||| | |||||||   |||| ||||||||||| |||||||| ||| ||||| |||    
T  42305395 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 42305296  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||| ||||| ||||||||| || |||||||||||    
T  42305295 aaattggaaggtttaacgagattgactgagttaacattcggtaaactcgtg 42305245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 32497981 - 32498101
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| |||||||||||||||||| |||| |||  |||||  |||    
T  32497981 cgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtttaacggatttgattgag 32498080  T
Q  374 ttaacactcagtaaactcgtg 394  Q
    ||||||||  |||||||||||    
T  32498081 ttaacactaggtaaactcgtg 32498101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 6388265 - 6388131
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| | |||  |||||| |||||||| ||| |||| || ||||||| | |||| |||||||||||||||||||||||  ||| | |||    
T  6388265 caatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggta 6388166  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    ||||||||||||||||| ||||||||| |||||||    
T  6388165 aaatcggaaagtttgacaagtttgaccaagttaac 6388131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 14781923 - 14781773
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| |||||| || | |||||||   |||| ||||||||||| |||||||| ||| ||||| |||    
T  14781923 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 14781824  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||||||||||||||||||    
T  14781823 aaattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtg 14781773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 16364116 - 16364266
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||   ||| ||| ||| ||||||| ||||||| | |||| |||||||||||  ||||||| ||| |||||||||    
T  16364116 caatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagta 16364215  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| |||||||||||  | ||||||||| |||||||||||    
T  16364216 aaatcggaaggtttaacgagtttgactaaattaacactcggtaaactcgtg 16364266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 17234676 - 17234810
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    ||||||| ||||||||  ||| ||||||  ||||||||| ||||| ||| ||||||| | |||| | | | |||||||||||||||||||||||| ||||    
T  17234676 aatgttcaacaaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaa 17234775  T
Q  345 aatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||| |||||||||||||||| |||||||||    
T  17234776 aatcggaatgtttgacgagtttgactcgagttaac 17234810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 18958518 - 18958368
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| | | ||||| |||    
T  18958518 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggta 18958419  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| || || ||||| |||||||||||| |||||||||||    
T  18958418 aaattggaaggtttaacaagattgactgagttaacactcggtaaactcgtg 18958368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 39467309 - 39467159
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| |||||| |||||||| ||||||| | |||| ||| |||||||  ||||||| | ||||||| |||    
T  39467309 caatgttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggta 39467210  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| ||||  |||||||||| |||||||||||| |||||||||||    
T  39467209 aaattggaaggtttagcgagtttgactgagttaacactcggtaaactcgtg 39467159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 43166467 - 43166317
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || |   |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| |   ||||| |||    
T  43166467 caatgttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggta 43166368  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| | || |||||||||||||||| |||||||||||| |||||||||||    
T  43166367 aaattgaaaggtttgacgagtttgactgagttaacactcggtaaactcgtg 43166317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 28317173 - 28317075
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| ||||||| ||||||||  ||||| |||  |||||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||||    
T  28317173 ccgaatttacgtttttaggtggcaaaaaggtgaaaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 28317075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 44725582 - 44725432
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||   ||| ||| |||| |||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  44725582 caatgttccgcaaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 44725483  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  44725482 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 44725432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 41252164 - 41252261
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| | ||||||||  ||||||||||||||||||| ||||||||||||| |  | ||||||||||||||||||||||| ||||||| |||||    
T  41252164 cgagtttacttttttaggtggcaaaaacgtgttaactcggaagtaaactcgatttttgatgaaatcggaaagtttgacgagtttaaccgagtcaacac 41252261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 394
Target Start/End: Complemental strand, 43308296 - 43308149
Alignment:
Q  247 tgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaa 346  Q
    |||||| ||||||| |||| |||||  |||| ||| ||||||| ||| ||||||| | |||| ||||||||||| ||  |||| ||| ||||| ||||||    
T  43308296 tgttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaa 43308197  T
Q  347 tcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    | |||| |||| || |||||||| |||||||||||| |||||||||||    
T  43308196 ttggaaggtttaacaagtttgactgagttaacactcggtaaactcgtg 43308149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 245 - 363
Target Start/End: Complemental strand, 12522646 - 12522528
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||||| |||| |||||  |||||||||  ||||| | | ||||||| | |||| ||||||||||| |||||||||||| ||||| ||||    
T  12522646 aatgttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaa 12522547  T
Q  345 aatcggaaagtttgacgag 363  Q
    |||||||| ||||||||||    
T  12522546 aatcggaaggtttgacgag 12522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 27878729 - 27878636
Alignment:
Q  289 tacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||||||| | |||| |||||||||||||| ||||| ||| ||||| |||||||||| | |||||||||||||||  ||||||||||||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactc 27878636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 28018910 - 28018817
Alignment:
Q  289 tacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    ||||||||||||| | |||| |||||||||||||| ||||| ||| ||||| |||||||||| | |||||||||||||||  ||||||||||||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactc 28018817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 27915680 - 27915580
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||| |||||||||||| || | |||| ||||||||||| ||  |||| |||||||||  ||||||||| | ||||||||||||||||||||||||||||    
T  27915680 ccgaatttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacact 27915581  T
Q  382 c 382  Q
    |    
T  27915580 c 27915580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 27962099 - 27961999
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||| |||||||||||| || | |||| ||||||||||| ||  |||| |||||||||  ||||||||| | ||||||||||||||||||||||||||||    
T  27962099 ccgaatttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacact 27962000  T
Q  382 c 382  Q
    |    
T  27961999 c 27961999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 282 - 378
Target Start/End: Original strand, 24067105 - 24067202
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||||| ||||||| | |||| ||||| ||||||||||| ||||| |||||| |||||||||| | |||||||||||| ||| |||||||||    
T  24067105 ccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcggcatgtttgacgagttcgactcgagttaac 24067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 378
Target Start/End: Complemental strand, 37131387 - 37131291
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    ||||||||| | ||||||| | |||| ||||| ||||||||||||||||||| |||| |||||||| ||| |||||| ||||||||| |||||||||    
T  37131387 cgagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttgaagagtttgactcgagttaac 37131291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 1528001 - 1527908
Alignment:
Q  287 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| |||| |||  ||||||||||||||||||||||||||||||||| | || ||||||||| ||| ||| |||||| |  |||||||||    
T  1528001 tttacgtttttaagtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaatgttggacaagtttggctaagttaacac 1527908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 7466761 - 7466881
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||| |||||||||||| || |||| || | |||| ||||||||||| |||||||| ||  |||||  |||||| |||| | || ||||||||||| |||    
T  7466761 cgagattaccgagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaattggaaggcttaacgagtttgactgag 7466860  T
Q  374 ttaacactcagtaaactcgtg 394  Q
    |||||||||  ||||||||||    
T  7466861 ttaacactcgataaactcgtg 7466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 12522489 - 12522423
Alignment:
Q  328 aactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||| ||||| ||||||| | || ||||||||||||||||||||||||||||  |||||||||||    
T  12522489 aactcggtttctggtaaaattgaaaggtttgacgagtttgaccgagttaacacttggtaaactcgtg 12522423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 4871195 - 4871114
Alignment:
Q  298 aggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    |||||||||| ||||||||| || |||||||||||||||| |  ||||||  | | ||||||||||||| ||||||||||||    
T  4871195 aggtgctaaatacgtgttaattcagaggtaaactcgattttttataaaattagtatgtttgacgagtttaaccgagttaaca 4871114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 26620419 - 26620338
Alignment:
Q  310 cgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    |||||||||| || |||||| ||  |||||  |||||||| |||||||||||||||||| |||||||||||||  |||||||    
T  26620419 cgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgacgagtttgatcgagttaacactcgataaactc 26620338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 41393958 - 41394065
Alignment:
Q  285 agtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcag 384  Q
    ||||||||| |||||||   |||| |||||||| ||||||||||||||  |||||  |||||||| || ||||||| | ||||| ||  ||||||||| |    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgacaaatttgatcgtattaacactcgg 41394057  T
Q  385 taaactcg 392  Q
    ||||||||    
T  41394058 taaactcg 41394065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 7760770 - 7760904
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||||||||||| |||| ||||   ||||||||| |||||||  | |||||||   |||| ||||| |||||| ||||||| | |||||||  |||    
T  7760770 aatgttccacaaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaatttgatttctgataa 7760869  T
Q  345 aatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    ||||  |  |||||||||||||||| |||||||||    
T  7760870 aatcaaattgtttgacgagtttgactcgagttaac 7760904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 33177936 - 33177851
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| | ||||| ||||||| | | ||||||||||||||| | || |||| | || |||||||||||||||| ||||||||||    
T  33177936 tttaggtaccaaaaatgtgttaatttgaaggtaaactcgatttttggtgaaattgaaatgtttgacgagtttgactgagttaacac 33177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 35879722 - 35879775
Alignment:
Q  326 taaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||||||  ||||||| |||| |||||||||||||||| |||||||||    
T  35879722 taaactcgatttccggtaaaattggaatgtttgacgagtttgactcgagttaac 35879775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 42423261 - 42423298
Alignment:
Q  354 gtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  42423261 gtttgacgagtttgaccgagttaacactgggtaaactc 42423298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 5e-91; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 29469124 - 29469313
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29469124 caatgtttcacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 29469223  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29469224 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 29469313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 244 - 413
Target Start/End: Original strand, 8084170 - 8084339
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8084170 caatgttccacaaaccgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 8084269  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttac 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8084270 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 8084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 284 - 433
Target Start/End: Complemental strand, 42937513 - 42937364
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactca 383  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||     
T  42937513 gagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcc 42937414  T
Q  384 gtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    ||||||||||| |||||  |||||||||||||||||| | ||||||||||    
T  42937413 gtaaactcgtgtgaaattaggcgagtttaccgtttttccgagtttactcc 42937364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 243 - 391
Target Start/End: Complemental strand, 29510209 - 29510061
Alignment:
Q  243 acaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 342  Q
    |||||||||| ||||||| |||| |||||  |||||||| |||||||||||||||||||   |||| ||||||||||| || |||||||| |||||| ||    
T  29510209 acaatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggt 29510110  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  29510109 aaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactc 29510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 49501324 - 49501174
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  49501324 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49501225  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  49501224 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtg 49501174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 49507389 - 49507239
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  49507389 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49507290  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||||||    
T  49507289 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtg 49507239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 50517192 - 50517304
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||||||||||||||||||| | |||| ||||||||||  |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  50517192 ccgagtttacgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggtaaaattggaaggtttgacgagtttgaccgagttaacact 50517291  T
Q  382 cagtaaactcgtg 394  Q
    | |||||||||||    
T  50517292 cggtaaactcgtg 50517304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 23671485 - 23671366
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||||||  ||||||||||||||| | |||| |||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| | |||    
T  23671485 gagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcgaaaagtttgacgagtttgagcaagt 23671386  T
Q  375 taacactcagtaaactcgtg 394  Q
    ||| ||||||||||||||||    
T  23671385 taagactcagtaaactcgtg 23671366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 41725523 - 41725671
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| |||||  || | ||||| ||||||||| ||||||| | |||| ||||||||||| |||||||||||||||||| |||    
T  41725523 caatgttcttcaaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 41725622  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    ||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  41725623 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcg 41725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 249 - 378
Target Start/End: Original strand, 871776 - 871905
Alignment:
Q  249 ttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatc 348  Q
    ||||| |||||| |||| |||||| |||||||||||||||||||| ||||||| | |||  ||||| |||||||||||||||||||||||| ||||||||    
T  871776 ttccataaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaat-cgtgtcaactcggaggtaaactcgatttctggtaaaatc 871874  T
Q  349 ggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||| |||||||||||||||| |||||||||    
T  871875 ggaatgtttgacgagtttgactcgagttaac 871905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 6487422 - 6487324
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||    
T  6487422 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 6487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 29855926 - 29856076
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||| |||||| || | || ||  |||| ||||||||||||||| |||| || | |||| ||||||||||| |||||||||||||||||| |||    
T  29855926 caatgttccataaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 29856025  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  29856026 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 29856076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 46286708 - 46286817
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||||||||||| ||||||| | |||| ||||||||| |  ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  46286708 ccgagtttacgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagtaaactcggaaggtttgacgagtttgaccgagttaacact 46286807  T
Q  382 cagtaaactc 391  Q
    |  |||||||    
T  46286808 cgataaactc 46286817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 51967277 - 51967374
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| | || |||||| ||||||||||||||||||||||||||||||    
T  51967277 cgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 51967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 379
Target Start/End: Complemental strand, 56424079 - 56423982
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||| ||||||||    
T  56424079 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttgatgagtttgaccaagttaaca 56423982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 32322476 - 32322627
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||| ||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| |||||||| || |||||||||||| ||||| |||    
T  32322476 caatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggta 32322575  T
Q  344 aaatcggaaagtttgacgagtttgaccgag-ttaacactcagtaaactcgtg 394  Q
    ||||||||| | || ||||||||||| ||| ||||||||| |||||||||||    
T  32322576 aaatcggaaggcttaacgagtttgactgagtttaacactcggtaaactcgtg 32322627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 49834590 - 49834475
Alignment:
Q  279 ttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    ||||||||||||||| ||||| | | |||| ||||||||||| |||||||||||| ||||| |||||||||||| |||| ||||||||||| |||||||     
T  49834590 ttaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaat 49834491  T
Q  379 actcagtaaactcgtg 394  Q
    |||| |||||||||||    
T  49834490 actcggtaaactcgtg 49834475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 30967134 - 30966984
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| ||| |||| | | ||||| |||    
T  30967134 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggta 30967035  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| |||||||||||  ||||||||||| |||||||||||    
T  30967034 aaattggaaggtttaacgagtttgactaagttaacactcggtaaactcgtg 30966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 9972773 - 9972870
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||| || ||||||||  |||||||||| |||||||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||||    
T  9972773 cgagtttatgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 9972870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 55165486 - 55165621
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||  |||||| ||||||||| |||||||||| |||| || | |||| ||| |||||| ||||||||||| ||||| | |||    
T  55165486 caatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggta 55165585  T
Q  344 aaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    ||||| ||| |||||||||||||||| |||||||||    
T  55165586 aaatcagaatgtttgacgagtttgactcgagttaac 55165621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 5800374 - 5800524
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  5800374 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggta 5800473  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    | ||| ||| |||| ||||||||||| ||||||||||||  ||||||||||    
T  5800474 acatcagaaggtttaacgagtttgactgagttaacactcgataaactcgtg 5800524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 23987607 - 23987756
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| | |||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| | | ||||| |||    
T  23987607 caatgttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggta 23987705  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||  |||||||||||    
T  23987706 aaattggaaggtttaacgagtttgactgagttaacactaggtaaactcgtg 23987756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 26491225 - 26491115
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactca 383  Q
    |||||||||||||||||| | |||| |||||||| |  |||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||| |      
T  26491225 gagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttg 26491126  T
Q  384 gtaaactcgtg 394  Q
    |||||||||||    
T  26491125 gtaaactcgtg 26491115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 27768474 - 27768624
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  27768474 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 27768573  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||| || |||||||||||    
T  27768574 aaattggaaggtttaacgagtttgactgagttaacattcggtaaactcgtg 27768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 28484306 - 28484456
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaa-cgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||| ||||| | |||| |||||   ||| ||||||||||||||| ||||||| | ||||  ||||||||||| |||||||||||| ||||| |||    
T  28484306 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggta 28484405  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||||||  ||||||||||    
T  28484406 aaattggaaggtttaacgagtttgactgagttaacactcgataaactcgtg 28484456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 366
Target Start/End: Original strand, 32889857 - 32889979
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  ||| |||||||||||||||||||||||| | |||| ||||||||||  || |||||||| |||||| |||    
T  32889857 caatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctggta 32889956  T
Q  344 aaatcggaaagtttgacgagttt 366  Q
    ||||| ||| |||||||||||||    
T  32889957 aaatcagaaggtttgacgagttt 32889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 33138799 - 33138877
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  33138799 ccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgac 33138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 48261488 - 48261638
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| |||||| || | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  48261488 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 48261587  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  48261588 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 48261638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 380
Target Start/End: Complemental strand, 8563461 - 8563364
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||| ||  |||||||||||||||||||| |||||||| ||| |  | |||||||||||||||||||||||||||||||||||||    
T  8563461 cgagtttacgtttttagatgacaaaaacgtgttaactcggagataaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacac 8563364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 415
Target Start/End: Complemental strand, 24966623 - 24966490
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacact 381  Q
    |||||||||||||||||||| | |||| |||||||||||||| ||||| ||| ||| | ||||||| |||| ||||| ||||||||||| ||||||||||    
T  24966623 ccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatgggaaggtttgccgagtttgaccaagttaacact 24966524  T
Q  382 cagtaaactcgtgcgaaatcgggcgagtttaccg 415  Q
      |||||||||||  || |||  |||||||||||    
T  24966523 tggtaaactcgtgtaaactcgaccgagtttaccg 24966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 393
Target Start/End: Complemental strand, 54853267 - 54853118
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||  |||| ||||||||||||| | |||| || | ||||  |||||||||| |||||||| ||| ||||| |||    
T  54853267 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgta 54853168  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgt 393  Q
    ||||  ||| |||| ||||||||||  |||||||||||| ||||||||||    
T  54853167 aaattagaaggtttaacgagtttgattgagttaacactcggtaaactcgt 54853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 5441842 - 5441962
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| ||||||| |||| |||| ||||||||||| |||    
T  5441842 cgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgag 5441941  T
Q  374 ttaacactcagtaaactcgtg 394  Q
    ||||||||| |||||||||||    
T  5441942 ttaacactcggtaaactcgtg 5441962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 37828221 - 37828071
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| |||||||  ||| || ||  |||| ||| ||||||||| | ||||| | | |||| ||||||||||| |||||||| ||| ||||| |||    
T  37828221 caatgttccgcaaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37828122  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  37828121 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 37828071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 40162788 - 40162886
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  |||||||||| || |||||| |||||||| |||   || |||||||||||||||||||||||||||||||||||||    
T  40162788 ccgagtttacgtttttaggtggcaaaaacgtgtaaattcggagataaactcggttttcggtgaaatcggaaagtttgacgagtttgaccgagttaacac 40162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 50018602 - 50018752
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||  ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| | ||||||||| |||||||| ||| ||||| |||    
T  50018602 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 50018701  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| | ||| ||||| |||||||||||| |||||||||||    
T  50018702 aaattggaaggtttaaagagattgacagagttaacactcggtaaactcgtg 50018752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 51321266 - 51321416
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||  ||| ||||||||| | ||||||| | |||| ||||||||||| || ||||| ||| ||||| |||    
T  51321266 caatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggta 51321365  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| || |||||||| |||||||||||| |||||||||||    
T  51321366 aaattggaaggtttaaccagtttgactgagttaacactcggtaaactcgtg 51321416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 54561218 - 54561316
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| | ||||||||  |||||| ||| |||||||||||||||||| ||| | || |||||||||||||||||| ||||||||||||||||||    
T  54561218 ccgagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgtgtttgaccgagttaacac 54561316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 26448631 - 26448728
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| | ||||||||  |||||| ||| ||||||||||||||||  |||| | || |||||||||||||||||||||||||||||||||||||    
T  26448631 cgagtttacatttttaggtggcaaaaacatgtaaactcggaggtaaacttaatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 26448728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 387
Target Start/End: Original strand, 54341552 - 54341695
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||| ||||| |||||||| ||| ||||| |||    
T  54341552 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggta 54341651  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaa 387  Q
    |||| | || |||| ||||||||||| |||||||||||| ||||    
T  54341652 aaattgaaaggtttaacgagtttgactgagttaacactcggtaa 54341695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 23170832 - 23170738
Alignment:
Q  285 agtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    ||||||||| ||||||||  ||||| ||||||| ||||||||||  ||| ||| | || |||||| |||||||||||||||||||||||||||||    
T  23170832 agtttacgtttttaggtggcaaaaatgtgttaattcggaggtaatttcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaaca 23170738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 32683818 - 32683669
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||   ||| |||||||||| |||| ||||||| | |||| |||||||| |  |||||||  ||| |||||  ||    
T  32683818 caatgttccacaaatcgagtgttaactctcagagattaccgagtt-acgtttttaggtacaaaaatcgtgttaattatgaggtaagatcggtttctgtta 32683720  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||  |||||||||||| |||||||||||    
T  32683719 aaattggaaggtttaacgagtttgaatgagttaacactcggtaaactcgtg 32683669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 37916283 - 37916349
Alignment:
Q  328 aactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||| ||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  37916283 aactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcagtaaactcgtg 37916349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 21486515 - 21486612
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  |||| ||||| |||||| ||||||||||| ||| | |  ||||| ||||||||||||||||||||| || ||||||    
T  21486515 cgagtttacgtttttaggtggcaaaaccgtgtaaactcgaaggtaaactcggtttttggagaaatcagaaagtttgacgagtttgacctaggtaacac 21486612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 25013446 - 25013522
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttga 359  Q
    ||||||||||| ||||||||  |||||| ||||||||||||| ||||||| |||| || | ||||||||||||||||    
T  25013446 cgagtttacgtttttaggtggcaaaaacatgttaactcggagctaaactcaatttttaatgaaatcggaaagtttga 25013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 41470424 - 41470352
Alignment:
Q  288 ttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||| ||| | || |||| ||||||||||||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgac 41470352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 14334393 - 14334491
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||| | |||| || || |||||||| ||||||| | ||| | ||||||||||||||||   | |||||||||||||||||||    
T  14334393 ccgagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcggaaagttgacctagtttgaccgagttaacac 14334491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 46863019 - 46862941
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||||||||||||||||| ||||||  |||||||||  || ||||| ||||||||| ||||||||| || |||||||    
T  46863019 ccgagtttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 40487761 - 40487712
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  40487761 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcg 40487712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 21306394 - 21306311
Alignment:
Q  297 taggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||| |||||||||||||||| || |||||  ||| || |||| ||||| ||||||||||||| ||||  |||||||||||    
T  21306394 taggtgccaaaaacgtgttaactcagaagtaaatccgagttttagtgaaatcagaaagtttgacgaatttggtcgagttaacac 21306311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 3860287 - 3860237
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    ||||||||||| |||| |||  |||||||||||||||||||||||||||||    
T  3860287 cgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 3860237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 3869044 - 3868994
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    ||||||||||| |||| |||  |||||||||||||||||||||||||||||    
T  3869044 cgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 3868994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 394
Target Start/End: Complemental strand, 29649703 - 29649646
Alignment:
Q  337 tctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||||| |||| |||| |||||||| || |||||||||||| |||||||||||    
T  29649703 tctagtaaaattggaaggtttaacgagtttaactgagttaacactcggtaaactcgtg 29649646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 26955394 - 26955433
Alignment:
Q  341 gtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  26955394 gtaaaatcgaaaagtttgtcgagtttgaccgagttaacac 26955433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 29966455 - 29966401
Alignment:
Q  325 gtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    ||||||||| ||| | || |||||| |||||| ||||||||||||||||||||||    
T  29966455 gtaaactcggtttttggtgaaatcgaaaagttcgacgagtttgaccgagttaaca 29966401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 24453923 - 24453976
Alignment:
Q  326 taaactcgatttctagtaaaatcggaaagtttgacgagtttgac-cgagttaac 378  Q
    |||||||||||||  ||||||| |||| |||||||||||||||| |||||||||    
T  24453923 taaactcgatttccggtaaaattggaatgtttgacgagtttgactcgagttaac 24453976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 5e-91; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 26757597 - 26757786
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||    
T  26757597 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggta 26757696  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26757697 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 26757786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 41353403 - 41353592
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41353403 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 41353502  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  41353503 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttacgagtttactcc 41353592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 4005049 - 4005239
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4005049 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 4005148  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg-tttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  4005149 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 4005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 1243445 - 1243256
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1243445 caatgttccacaaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1243346  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||    
T  1243345 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttaccgttttagcgagtttactcc 1243256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 8147299 - 8147488
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8147299 caatgttccacaaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8147398  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  8147399 aaattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 8147488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 9192006 - 9192196
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9192006 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 9192105  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg-tttttgcaagtttactcc 433  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  9192106 aaatcagaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 9192196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 51106874 - 51107064
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  51106874 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggta 51106973  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg-tttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  51106974 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 51107064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 243 - 433
Target Start/End: Complemental strand, 11579231 - 11579050
Alignment:
Q  243 acaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 342  Q
    ||||||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  11579231 acaatgttccacaaatcgcatgtcaactcggcgagtttac---------gtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggt 11579141  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  11579140 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagttcaccgtttttgcgagtttactcc 11579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 245 - 395
Target Start/End: Complemental strand, 3583694 - 3583544
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||||| |||| |||||  |||||||||||||||||||| ||||||| |  ||| ||||||||||  || ||||||||| ||||||||||    
T  3583694 aatgttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaa 3583595  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgc 395  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  3583594 aatcggaaagtttgacgagtttaaccgagttaacactcggtaaacttgtgc 3583544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 275 - 394
Target Start/End: Complemental strand, 47371683 - 47371564
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||| |||||||||||  |||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  47371683 gagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgccgagtttgaccgagt 47371584  T
Q  375 taacactcagtaaactcgtg 394  Q
    |||||||| |||||||||||    
T  47371583 taacactcggtaaactcgtg 47371564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 45272976 - 45273126
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||||| ||||||| | ||||  |||||||||| |||||||||||| ||||| |||    
T  45272976 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 45273075  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  45273076 aaatcggaaggtttgacgagtttgactgagttaacactcggtaaactcgtg 45273126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 25831038 - 25830888
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| ||| |||| ||| || ||| ||    
T  25831038 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaatcggttcctaata 25830939  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| ||||||||||||||||||||||||    
T  25830938 aaattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtg 25830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 48966630 - 48966480
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| | || |||||  ||||||||| |||||||||||||||||| | |||| ||||||||||| |||||||||| |||||||  |     
T  48966630 caatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatg 48966531  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||||||||||||||||||||||| |||| |||||||||||    
T  48966530 aaattggaaggtttgacgagtttgaccgagttaatactcggtaaactcgtg 48966480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 244 - 413
Target Start/End: Complemental strand, 5209507 - 5209338
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| ||| |   ||||||| ||  ||||||||||||||| | |||| ||||||||||||||||| |||||||||||| ||     
T  5209507 caatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtg 5209408  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttac 413  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| |||  ||||| | |||||||||    
T  5209407 aaatcagaaagtttgacgagtttgatcgagttaacactcaataaacttgtgtaaaatcagccgagtttac 5209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 49453200 - 49453049
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaa-cgtgttaactcggaggtaaactcgatttctagt 342  Q
    ||||||||| ||||||| |||| ||||   |||||||||| |||||| |||||||||| | ||||| ||||||||||| |||||||||||||||||| |     
T  49453200 caatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctgga 49453101  T
Q  343 aaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||  || ||||||| ||||||||||||||||||||| |||||||||||    
T  49453100 aaaatcataaggtttgacaagtttgaccgagttaacactcggtaaactcgtg 49453049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 5494887 - 5494737
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||| | |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  5494887 caatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggta 5494788  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| ||| |||||| ||||||||| ||||||||||||  ||||||||||    
T  5494787 aaatcagaaggtttgatgagtttgactgagttaacactcgataaactcgtg 5494737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 15834823 - 15834673
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||||||| | |||    
T  15834823 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 15834724  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  15834723 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 15834673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 46328395 - 46328545
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| |||||  ||    
T  46328395 caatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgtta 46328494  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| |||| ||||||||||  |||||||||||| |||||||||||    
T  46328495 aaatcggaaggtttaacgagtttgattgagttaacactcggtaaactcgtg 46328545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 7798520 - 7798618
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  7798520 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 7798618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 32760198 - 32760088
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactca 383  Q
    |||||||||| ||||||| | |||| ||||||||||| |||||||||||| |||||||||||||||| | | || |||||||||||||||||||||||||    
T  32760198 gagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgggaggcttaacgagtttgaccgagttaacactca 32760099  T
Q  384 gtaaactcgtg 394  Q
     ||||||||||    
T  32760098 ctaaactcgtg 32760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 1108374 - 1108468
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||| ||| | || |||||||||||||||||||||||||| ||||||||    
T  1108374 gagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgactgagttaac 1108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 6312985 - 6313135
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  6312985 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 6313084  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  6313085 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 6313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 390
Target Start/End: Complemental strand, 8141022 - 8140876
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| ||||||||||| ||||||| | |||| ||||||||||| |||||||| ||||||||| |||    
T  8141022 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 8140923  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 390  Q
    ||||  ||| |||| | ||||||||| |||||||||||| |||||||    
T  8140922 aaattagaaggtttaatgagtttgactgagttaacactcggtaaact 8140876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 25612501 - 25612651
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  25612501 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 25612600  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  25612601 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 25612651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 391
Target Start/End: Complemental strand, 28404084 - 28403938
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||| ||||||| |||| |||||  ||| ||||| |||||||| | ||||||| | |||| |||||||||| | ||||||| ||| |||||| |||    
T  28404084 aatgttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataa 28403985  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    ||||| || ||||||||| ||||||||||||||||||| ||||||||    
T  28403984 aatcgaaatgtttgacgaatttgaccgagttaacactcggtaaactc 28403938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 29396223 - 29396073
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  29396223 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29396124  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  29396123 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 29396073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 378
Target Start/End: Original strand, 52182311 - 52182443
Alignment:
Q  247 tgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaa 346  Q
    |||| ||||||||| |||| |||||| |||||||| ||||||||||| ||||||| || ||| ||||| || ||||||||||| ||||||||| ||||||    
T  52182311 tgtttcacaaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctggtaaaa 52182410  T
Q  347 tcggaaagtttgacgagtttgac-cgagttaac 378  Q
    ||| || |||||||||||| ||| |||||||||    
T  52182411 tcgaaatgtttgacgagttcgactcgagttaac 52182443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 33886953 - 33886863
Alignment:
Q  290 acgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 33886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 33957297 - 33957387
Alignment:
Q  290 acgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||| |||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 33957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 380
Target Start/End: Original strand, 34019139 - 34019237
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||||| || |||||  ||||| ||||||||||||||||||| ||||||| | || |||||||||||||||||||| ||||||||||||||||    
T  34019139 ccgagtttacgttttaaggtggcaaaaatgtgttaactcggaggtaaattcgatttttggtgaaatcggaaagtttgacgaggttgaccgagttaacac 34019237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 380
Target Start/End: Complemental strand, 34751674 - 34751575
Alignment:
Q  281 accgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||||| ||||  ||  ||||||||||||||||||||||||||||| ||| | || ||||||||||||||| | |||||||||||||||||||    
T  34751674 accgagtttacgtttttaaatggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgccaagtttgaccgagttaacac 34751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 378
Target Start/End: Complemental strand, 49971734 - 49971599
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    ||||||||||||||||  ||| ||||    ||||||||||||||||||| ||||||| | |||| ||||| |||||||||||||||||| ||||| ||||    
T  49971734 aatgttccacaaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaa 49971635  T
Q  345 aatcggaaagt-ttgacgagtttgac-cgagttaac 378  Q
    ||||| || || |||||||||||||| |||||||||    
T  49971634 aatcgaaatgtgttgacgagtttgactcgagttaac 49971599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 394
Target Start/End: Original strand, 18798897 - 18799011
Alignment:
Q  280 taccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    |||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| ||||||| |||| |||| ||||| ||||| |||||||||    
T  18798897 taccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagattgactgagttaaca 18798996  T
Q  380 ctcagtaaactcgtg 394  Q
    ||| |||||||||||    
T  18798997 ctcggtaaactcgtg 18799011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 392
Target Start/End: Complemental strand, 35177319 - 35177201
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||||||| | | |||| || ||||||| | |||| |||||||| || ||||||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  35177319 cgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgataaaatcggaaggattgacgagtttgaccgag 35177220  T
Q  374 ttaacactcagtaaactcg 392  Q
    |||||||||  ||||||||    
T  35177219 ttaacactcgataaactcg 35177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 38535935 - 38535785
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| || | |||||  | || ||||||||||||||| ||||| | | ||||  |||||||||| |||||||||| | ||||| |||    
T  38535935 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38535836  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||   || ||||||||||| |||||||||||| |||||||||||    
T  38535835 aaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtg 38535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 38558153 - 38558003
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| || | |||||  | || ||||||||||||||| ||||| | | ||||  |||||||||| |||||||||| | ||||| |||    
T  38558153 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38558054  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||   || ||||||||||| |||||||||||| |||||||||||    
T  38558053 aaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtg 38558003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 42304586 - 42304489
Alignment:
Q  297 taggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||| |||| | |||||| ||||||||||||||| ||||| ||||||| |||| |||| |||||||||||||||||||||||  |||||||||||    
T  42304586 taggtgccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtg 42304489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 49237075 - 49236974
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    |||||||| |||||||| |||||||||| | |||| |||||||| |||||| ||| |||| ||||| ||||||||| || ||||||||||||||||||||    
T  49237075 cgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctggtaaaatcgaaaggtttgacgagtttgaccgag 49236976  T
Q  374 tt 375  Q
    ||    
T  49236975 tt 49236974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 379
Target Start/End: Original strand, 15927312 - 15927416
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    ||||||| |||||||| ||||||| || | ||||  |||||||||| |||||||| ||| |||||  |||||||||||||||||||||||||||| ||||    
T  15927312 gagtttatcgagtttaagtgtttaagtaccaaaattgtgttaactctgaggtaaattcggtttctgataaaatcggaaagtttgacgagtttgactgagt 15927411  T
Q  375 taaca 379  Q
    |||||    
T  15927412 taaca 15927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 394
Target Start/End: Complemental strand, 48177197 - 48177081
Alignment:
Q  279 ttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgattt-ctagtaaaatcggaaagtttgacgagtttgaccgagttaa 377  Q
    |||| |||||||||| |||||||   |||| ||||||||||| |||||||| ||| ||| || ||||||| |||| |||| ||||||||||| |||||||    
T  48177197 ttactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggtaaaattggaaggtttaacgagtttgactgagttaa 48177098  T
Q  378 cactcagtaaactcgtg 394  Q
    |||||||||||||||||    
T  48177097 cactcagtaaactcgtg 48177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 51702004 - 51702154
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | ||||  |||||||||| |||||||| ||| ||||| |||    
T  51702004 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggta 51702103  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||   || |||| ||||||||||| |||||||||||| |||||||||||    
T  51702104 aaattaaaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 51702154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 49231453 - 49231562
Alignment:
Q  281 accgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    |||||||||| || ||||||| | |||| ||||||||||| |||||||||||| ||||| ||| |||||||| |||| |||||||||||  ||||||||     
T  49231453 accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggtttaacgagtttgactaagttaacaa 49231552  T
Q  381 tcagtaaact 390  Q
    || |||||||    
T  49231553 tcggtaaact 49231562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 415
Target Start/End: Original strand, 25253506 - 25253646
Alignment:
Q  275 gagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    |||||||||||||||| || ||||||| | |||| ||||||||  | |||||||| ||| ||||| ||||| ||||||  ||||||||||||||| ||||    
T  25253506 gagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaagatttgacgagtttgactgagt 25253605  T
Q  375 taacactcagtaaactcgtgcgaaatcgggcgagtttaccg 415  Q
    ||||| || |||||||| ||  || |||  |||||||||||    
T  25253606 taacattcggtaaactcttgtaaactcgatcgagtttaccg 25253646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 18954485 - 18954563
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||||||||| ||| | || |||||||||||||||||    
T  18954485 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgac 18954563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 3593289 - 3593358
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagt 374  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||| |||||||    
T  3593289 aaaatcgtgttaactcggaggtaaattcgatttctaataaaatcggaaggtttgacaagtttaaccgagt 3593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 27257979 - 27257872
Alignment:
Q  262 gtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacg 361  Q
    |||| |||||| ||||||||  || ||||||| ||||||| | |||| ||||| ||||| |||||||||| |||||   |||||||||||| ||||||||    
T  27257979 gtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatgtttgacg 27257880  T
Q  362 agtttgac 369  Q
    ||||||||    
T  27257879 agtttgac 27257872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 9322297 - 9322181
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  9322297 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9322198  T
Q  344 aaatcggaaagtttgac 360  Q
    |||| |||| |||||||    
T  9322197 aaattggaaggtttgac 9322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 29219611 - 29219680
Alignment:
Q  325 gtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| ||| ||||| || |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  29219611 gtaaaatcggtttctggtgaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 29219680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 1463810 - 1463620
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1463810 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1463711  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgt-ttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  1463710 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 1463620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 244 - 433
Target Start/End: Original strand, 6788061 - 6788251
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6788061 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 6788160  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccg-tttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  6788161 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 6788251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 244 - 433
Target Start/End: Complemental strand, 10113919 - 10113730
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | |||    
T  10113919 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttggta 10113820  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgtttttgcaagtttactcc 433  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10113819 aaatcggaaagtttgacgagtttgaccgagtttagactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgagtttactcc 10113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 245 - 413
Target Start/End: Original strand, 3000202 - 3000370
Alignment:
Q  245 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 344  Q
    |||||||||||||||  |||| |||||| ||||||||| || ||||||||||||||| | |||| ||||||||||||| |||||| ||||||| | ||||    
T  3000202 aatgttccacaaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaa 3000301  T
Q  345 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttac 413  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||  |||||||  ||||||||    
T  3000302 aatcgggaagtttgacgagtttgatcgagttaacactcaataaactcgtgtaaaatcggctgagtttac 3000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 16438667 - 16438817
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||||||| ||||||||||| ||||||| | |||| |||||||||| |||||||||||||| |||| |||    
T  16438667 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 16438766  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||||| ||||||||||||| | ||||||| ||||| |||||||||||    
T  16438767 aaatcggaaggtttgacgagtttaatcgagttagcactcggtaaactcgtg 16438817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 274 - 392
Target Start/End: Complemental strand, 31975761 - 31975643
Alignment:
Q  274 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 373  Q
    ||||||||| ||||||| |||||||||| | |||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31975761 cgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaaggtttgacgagtttgaccgag 31975662  T
Q  374 ttaacactcagtaaactcg 392  Q
    |||| |||| |||||||||    
T  31975661 ttaagactcggtaaactcg 31975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 380
Target Start/End: Complemental strand, 31996348 - 31996251
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  31996348 cgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 31996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 2606856 - 2607003
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| |||||||  ||| |||||   |||||||| |||||||||||||||||  | |||| ||| ||||||| |||||||||||||||||| |||    
T  2606856 caatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggta 2606955  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 391  Q
    ||||| ||| |||||| ||||||||||||||||||||||| |||||||    
T  2606956 aaatcagaaggtttgatgagtttgaccgagttaacactcaataaactc 2607003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 378
Target Start/End: Complemental strand, 8779682 - 8779586
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaac 378  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||| |||||||    
T  8779682 ccgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccaagttaac 8779586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 392
Target Start/End: Original strand, 31067841 - 31067989
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  31067841 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31067940  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  31067941 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcg 31067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 14262228 - 14262090
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||| | ||||||| | ||||||| | |||| ||||||||||| |||||||| ||||||||| |||    
T  14262228 caatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 14262129  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    |||| |||| |||| ||||||||||| ||||||||||||    
T  14262128 aaattggaaggtttaacgagtttgactgagttaacactc 14262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 21199556 - 21199650
Alignment:
Q  285 agtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaaca 379  Q
    ||||||||| ||||||||  |||| |||||||||||  ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  21199556 agtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaaca 21199650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 382
Target Start/End: Original strand, 7497507 - 7497645
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| |||||||  ||| |||||  |||| ||| | ||||||||| ||||||| | |||| ||||||||||| |||||||||||| ||||| |||    
T  7497507 caatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 7497606  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    |||| |||| |||| ||||||||||  ||||||||||||    
T  7497607 aaattggaaggtttaacgagtttgattgagttaacactc 7497645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 30384856 - 30384706
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||| ||| ||||||| |||| |||||  |||| |||||||||||| || ||||||| | |||| |||||||||||  ||||||| ||  |||||  ||    
T  30384856 caatgatccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgata 30384757  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  30384756 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 30384706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 31896046 - 31896196
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| || ||  |||| ||| ||||| ||| | ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  31896046 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31896145  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  31896146 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 31896196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 392
Target Start/End: Complemental strand, 4200243 - 4200095
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| || ||  |||| ||| ||||||||| | |||| || | |||| | ||||||||| |||||||| ||| ||||| |||    
T  4200243 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 4200144  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  4200143 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcg 4200095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 389
Target Start/End: Complemental strand, 34758871 - 34758726
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| | || |||||  |||| ||| | ||||||||| ||||||| | |||| ||||||||||| |||||||| ||| |||||  ||    
T  34758871 caatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 34758772  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaac 389  Q
    |||| |||| |||| || |||||||| |||||||||||| ||||||    
T  34758771 aaattggaaggtttaacaagtttgactgagttaacactcggtaaac 34758726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 28900939 - 28900863
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttg 358  Q
    |||||||||| ||||||||| | |||| ||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  28900939 ccgagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 28900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 1452118 - 1452072
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagttta 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1452118 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagttta 1452072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 7835465 - 7835387
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgac 360  Q
    |||||||||||| ||||||||  ||||||||||||| ||||||||||||||| ||| | || |||||||||||||||||    
T  7835465 ccgagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 31535132 - 31535068
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagtt 375  Q
    |||||||||| |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  31535132 gtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgacgagtttgaccgagtt 31535068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 12028997 - 12029086
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||||||||  |||||||||||||||| || | |||||| || ||||||||||||||||  |||||||||  | ||||||||||    
T  12028997 aaaaacgtgttaactttgaggtaaactcgatttttattgaaatcgaaatgtttgacgagtttgacatagttaacacgtattaaactcgtg 12029086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 394
Target Start/End: Original strand, 34773873 - 34773944
Alignment:
Q  323 aggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||| ||| ||||| ||||||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  34773873 aggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 34773944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 394
Target Start/End: Original strand, 24194471 - 24194525
Alignment:
Q  341 gtaaaatcggaaagtttgacgagt-ttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  24194471 gtaaaattggaaagtttgacgagtattgaccgagttaacactcggtaaactcgtg 24194525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 13461374 - 13461459
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgac 369  Q
    |||||||||| |||| ||   |||| ||||| |||||||||||||||||| ||| | |||||||| ||| ||||||||||||||||    
T  13461374 gagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgacgagtttgac 13461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 21010965 - 21010883
Alignment:
Q  295 tttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaa 377  Q
    |||||||| |||| ||||||||| ||| |||| |||||| ||| | || |||||  || ||||||||||||| ||||||||||    
T  21010965 tttaggtgttaaatacgtgttaattcgaaggtcaactcggtttttggtgaaatcaaaatgtttgacgagtttaaccgagttaa 21010883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 1044 - 894
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| ||| |   ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||| ||||| |||    
T  1044 caatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctggta 945  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  944 aaatcggaaagtttgatgagtttgaccgagttaacacttagtaaactcgtg 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 57856 - 57706
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||||||| |||||||||    
T  57856 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 57757  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    ||||| ||| |||| | ||||||||  |||||||||||| |||||||||||    
T  57756 aaatcagaaggtttaatgagtttgattgagttaacactcggtaaactcgtg 57706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 382
Target Start/End: Original strand, 1276 - 1414
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||||||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||||| ||| ||||| |||    
T  1276 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgta 1375  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    |||| |||| |||| ||||||||||| ||||||||||||    
T  1376 aaattggaaggtttaacgagtttgactgagttaacactc 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 10934 - 11084
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    ||||||||| ||||||| |||| |||||  |||| ||||||||||||| | ||||||| | |||| ||||||||||| |||||||| ||||||| | |||    
T  10934 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 11033  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||| |||| |||| ||||||||||| |||||||||||| |||||||||||    
T  11034 aaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtg 11084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 281 - 380
Target Start/End: Original strand, 1365 - 1464
Alignment:
Q  281 accgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||||| ||||||||  |||||| |||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||    
T  1365 accgagtttacgtttttaggtggcaaaaacatgttaacttggaggtaaactcggtttttagtgaaatcggaaagtttgacgagtttaaccgagttaacac 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 25700 - 25651
Alignment:
Q  284 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  25700 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcg 25651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 382
Target Start/End: Original strand, 89241 - 89379
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 343  Q
    |||||||||  |||||| |||| ||||| | ||||||| |||||||| || ||||||| | || | |||||||||| | ||||||||||||||||| |||    
T  89241 caatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggta 89340  T
Q  344 aaatcggaaagtttgacgagtttgaccgagttaacactc 382  Q
    |||| |||| ||||||||||||||| |||||||||||||    
T  89341 aaattggaaggtttgacgagtttgatcgagttaacactc 89379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 380
Target Start/End: Original strand, 1727 - 1796
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacac 380  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  1727 gtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 1796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 394
Target Start/End: Complemental strand, 39417 - 39277
Alignment:
Q  254 caaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaa 353  Q
    ||||||| |||| |||||  |||| ||||||||||||||| ||||||| | |||| ||||||||| | ||||| |||||| ||||| ||||||||| ||     
T  39417 caaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaaag 39318  T
Q  354 gtttgacgagtttgaccgagttaacactcagtaaactcgtg 394  Q
    |||||||||||||||| |||||| ||||   ||||||||||    
T  39317 gtttgacgagtttgactgagttagcacttgataaactcgtg 39277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 539 - 486
Alignment:
Q  244 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  539 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgttt 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 433
Target Start/End: Complemental strand, 489 - 418
Alignment:
Q  363 gtttgaccgagttaacactcagtaaactcgtgcgaaatcgggcgagtttaccgt-ttttgcaagtttactcc 433  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  489 gtttgaccgagttaacactcactaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcc 418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 8855 - 8931
Alignment:
Q  282 ccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttg 358  Q
    |||||||||| ||||||||| | |||| ||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  8855 ccgagtttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttg 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 392
Target Start/End: Complemental strand, 16754 - 16673
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||||||||| |||||||||||| ||||| ||||||||| || |||| ||||||||||| |||||||||||  |||||||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 16673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 392
Target Start/End: Complemental strand, 20990 - 20909
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||||||||| |||||||||||| ||||| ||||||||| || |||| ||||||||||| |||||||||||  |||||||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 20909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 392
Target Start/End: Original strand, 28811 - 28892
Alignment:
Q  311 gtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 392  Q
    |||||||||| |||||||||||| ||||| ||||||||| || |||| ||||||||||| |||||||||||  |||||||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 28892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 15132 - 15225
Alignment:
Q  305 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag----ttaacactcagtaaactcgtg 394  Q
    |||| ||||||||||| |||||||| ||| ||| | ||||||| |||| |||| ||||||||||| |||    |||||||||||||||||||||    
T  15132 aaaatcgtgttaactctgaggtaaaatcggtttatggtaaaattggaaggtttaacgagtttgactgagttaattaacactcagtaaactcgtg 15225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 390 - 440
Alignment:
Q  283 cgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcg 333  Q
    ||||||||||| |||| |||  |||||||||||||||||||||||||||||    
T  390 cgagtttacgtttttatgtggcaaaaacgtgttaactcggaggtaaactcg 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University