View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1643_low_115 (Length: 252)
Name: NF1643_low_115
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1643_low_115 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 33681045 - 33681264
Alignment:
| Q |
19 |
ggtggatatttttggatttgtctcatgggtttatgaattttgtgtgtatcatgattgatttcgccatttaaagagacataatgatacatctcattgttca |
118 |
Q |
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| T |
33681045 |
ggtggatatttttggatttgtctcatgggtttatgaattttgtgtgtatcatgattgattccgccatttaaaaagacataacgatacatctcattgttca |
33681144 |
T |
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| Q |
119 |
tttgtctttcattcatgtgtaatttttcatatataattaaaaattaggtgttgtgtatatgttttaatcgaacattttgaatcaacatattcatttcaaa |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33681145 |
tttgtctttcattcatgtgtaatttttcatatataattaaaaactaggtgttgtgtatatgttttaatcgaacattttgaatcaacatattcatttcaaa |
33681244 |
T |
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| Q |
219 |
ctattgtttttatggcctat |
238 |
Q |
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|||||||||||||||||||| |
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| T |
33681245 |
ctattgtttttatggcctat |
33681264 |
T |
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