View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1643_low_119 (Length: 250)

Name: NF1643_low_119
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1643_low_119
NF1643_low_119
[»] chr4 (30 HSPs)
chr4 (1-245)||(28973434-28973678)
chr4 (1-245)||(54331317-54331562)
chr4 (1-245)||(5271949-5272194)
chr4 (1-245)||(14829185-14829430)
chr4 (1-245)||(38008631-38008877)
chr4 (1-245)||(37701271-37701516)
chr4 (1-236)||(34056237-34056473)
chr4 (1-236)||(2776656-2776893)
chr4 (1-236)||(19831071-19831307)
chr4 (1-235)||(17740423-17740657)
chr4 (6-236)||(21353462-21353693)
chr4 (1-234)||(22115725-22115959)
chr4 (1-245)||(23479271-23479516)
chr4 (1-245)||(7643466-7643711)
chr4 (1-234)||(36515014-36515248)
chr4 (1-234)||(53342792-53343026)
chr4 (3-230)||(8531203-8531432)
chr4 (16-236)||(55998401-55998622)
chr4 (1-236)||(40622531-40622767)
chr4 (1-245)||(17699547-17699792)
chr4 (3-236)||(13628432-13628669)
chr4 (1-245)||(33502675-33502916)
chr4 (1-245)||(41983907-41984151)
chr4 (1-236)||(47557100-47557333)
chr4 (1-127)||(7847514-7847640)
chr4 (88-236)||(28134826-28134975)
chr4 (81-245)||(35495298-35495463)
chr4 (1-246)||(36857456-36857684)
chr4 (131-245)||(7842707-7842811)
chr4 (34-236)||(56541169-56541372)
[»] chr3 (24 HSPs)
chr3 (1-245)||(16342007-16342251)
chr3 (1-245)||(35087497-35087742)
chr3 (1-236)||(48977043-48977279)
chr3 (1-235)||(54513143-54513377)
chr3 (1-245)||(50770906-50771151)
chr3 (1-245)||(6103785-6104031)
chr3 (1-236)||(32755873-32756109)
chr3 (1-236)||(48520699-48520935)
chr3 (1-245)||(49113415-49113660)
chr3 (1-245)||(52853103-52853348)
chr3 (1-235)||(31368674-31368910)
chr3 (1-245)||(50741724-50741968)
chr3 (1-228)||(55294440-55294667)
chr3 (1-230)||(11597619-11597851)
chr3 (1-236)||(52462590-52462826)
chr3 (1-195)||(8242891-8243086)
chr3 (1-197)||(40824329-40824526)
chr3 (1-204)||(18741887-18742091)
chr3 (4-245)||(21699249-21699476)
chr3 (1-245)||(54934166-54934401)
chr3 (1-103)||(51248797-51248899)
chr3 (1-73)||(23194712-23194784)
chr3 (145-236)||(51248708-51248799)
chr3 (34-222)||(23936884-23937072)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-245)||(48895-49139)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-245)||(176811-177055)
scaffold0010 (1-245)||(120256-120501)
[»] chr2 (22 HSPs)
chr2 (1-245)||(33907618-33907862)
chr2 (1-245)||(26827886-26828130)
chr2 (1-245)||(11706999-11707245)
chr2 (1-245)||(19126345-19126589)
chr2 (1-245)||(26822006-26822251)
chr2 (1-237)||(18092381-18092618)
chr2 (1-229)||(1514646-1514875)
chr2 (1-245)||(16724010-16724255)
chr2 (1-245)||(42885760-42886005)
chr2 (1-245)||(45204680-45204924)
chr2 (1-235)||(36632711-36632946)
chr2 (1-245)||(30570209-30570454)
chr2 (1-240)||(21098090-21098320)
chr2 (2-236)||(33663458-33663691)
chr2 (1-245)||(45399183-45399418)
chr2 (1-235)||(35285952-35286173)
chr2 (1-122)||(11448241-11448362)
chr2 (1-138)||(19167519-19167657)
chr2 (1-113)||(27364497-27364609)
chr2 (43-245)||(4811943-4812136)
chr2 (3-65)||(5252901-5252963)
chr2 (196-245)||(30572285-30572334)
[»] chr8 (30 HSPs)
chr8 (1-236)||(38993789-38994024)
chr8 (1-236)||(44599806-44600041)
chr8 (1-245)||(14078477-14078722)
chr8 (3-235)||(9761373-9761606)
chr8 (2-245)||(19395210-19395454)
chr8 (1-245)||(27273328-27273572)
chr8 (1-245)||(6477140-6477385)
chr8 (1-245)||(33423906-33424151)
chr8 (1-245)||(36597682-36597927)
chr8 (1-245)||(38962264-38962509)
chr8 (1-245)||(38992608-38992853)
chr8 (1-236)||(42810580-42810816)
chr8 (1-236)||(41977603-41977839)
chr8 (1-236)||(44382447-44382683)
chr8 (1-230)||(3751223-3751454)
chr8 (3-245)||(45293221-45293464)
chr8 (1-234)||(23522307-23522538)
chr8 (1-245)||(19248209-19248455)
chr8 (1-245)||(19321393-19321639)
chr8 (1-235)||(41628996-41629229)
chr8 (1-163)||(22332374-22332537)
chr8 (46-230)||(41156750-41156935)
chr8 (1-121)||(5835816-5835936)
chr8 (1-235)||(22946447-22946668)
chr8 (94-245)||(30826550-30826702)
chr8 (84-230)||(12760526-12760672)
chr8 (167-245)||(22332889-22332967)
chr8 (3-67)||(42785443-42785507)
chr8 (1-66)||(41533506-41533571)
chr8 (1-36)||(30826699-30826734)
[»] scaffold0242 (1 HSPs)
scaffold0242 (1-245)||(3079-3323)
[»] chr6 (20 HSPs)
chr6 (1-245)||(1072930-1073175)
chr6 (1-245)||(30044543-30044788)
chr6 (1-245)||(15275971-15276216)
chr6 (1-245)||(18598652-18598898)
chr6 (1-245)||(34856287-34856532)
chr6 (1-236)||(2521509-2521745)
chr6 (1-240)||(34321435-34321675)
chr6 (1-245)||(14887605-14887850)
chr6 (1-234)||(18312137-18312371)
chr6 (1-230)||(33321120-33321350)
chr6 (1-234)||(35041434-35041668)
chr6 (1-245)||(17939855-17940100)
chr6 (1-245)||(4424820-4425065)
chr6 (1-245)||(22373510-22373753)
chr6 (1-245)||(7222645-7222891)
chr6 (37-236)||(14831861-14832061)
chr6 (1-245)||(21799878-21800121)
chr6 (1-87)||(11933149-11933235)
chr6 (1-87)||(33814485-33814571)
chr6 (1-63)||(25540450-25540512)
[»] chr1 (21 HSPs)
chr1 (1-245)||(18814578-18814823)
chr1 (1-245)||(34687946-34688191)
chr1 (2-234)||(44406730-44406963)
chr1 (1-236)||(41962575-41962811)
chr1 (1-235)||(34692484-34692719)
chr1 (1-245)||(31620048-31620293)
chr1 (1-245)||(38844854-38845099)
chr1 (1-245)||(41829697-41829941)
chr1 (1-235)||(10694470-10694705)
chr1 (1-245)||(52521264-52521509)
chr1 (1-236)||(50561419-50561653)
chr1 (1-245)||(48340688-48340919)
chr1 (4-236)||(52310203-52310435)
chr1 (24-236)||(47135769-47135982)
chr1 (1-245)||(36682408-36682643)
chr1 (1-245)||(45005139-45005374)
chr1 (1-245)||(17671819-17672054)
chr1 (1-235)||(12245541-12245763)
chr1 (37-234)||(16031279-16031467)
chr1 (1-155)||(17709450-17709605)
chr1 (83-230)||(51965460-51965608)
[»] chr5 (25 HSPs)
chr5 (1-245)||(7285994-7286239)
chr5 (1-221)||(34374041-34374261)
chr5 (1-235)||(21030435-21030671)
chr5 (1-235)||(1851617-1851852)
chr5 (1-245)||(38934779-38935024)
chr5 (1-236)||(2195491-2195727)
chr5 (1-236)||(33610797-33611033)
chr5 (1-245)||(35539581-35539818)
chr5 (1-236)||(3150261-3150497)
chr5 (1-245)||(30689628-30689875)
chr5 (1-245)||(3029071-3029317)
chr5 (1-236)||(27066199-27066434)
chr5 (1-235)||(33706431-33706666)
chr5 (1-245)||(26320734-26320977)
chr5 (1-245)||(10512022-10512266)
chr5 (1-235)||(4882599-4882834)
chr5 (1-245)||(3396793-3397041)
chr5 (1-235)||(20995554-20995788)
chr5 (1-230)||(17996897-17997130)
chr5 (1-245)||(20350251-20350497)
chr5 (1-234)||(20758273-20758507)
chr5 (1-245)||(41781169-41781403)
chr5 (4-245)||(19448320-19448554)
chr5 (1-245)||(33930141-33930376)
chr5 (1-75)||(12420254-12420328)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-245)||(26019-26264)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-245)||(10279-10524)
[»] chr7 (24 HSPs)
chr7 (3-245)||(11500214-11500457)
chr7 (1-245)||(17478267-17478513)
chr7 (1-245)||(17574701-17574947)
chr7 (1-236)||(5963060-5963297)
chr7 (1-236)||(33638337-33638573)
chr7 (1-206)||(8925573-8925779)
chr7 (1-245)||(17482702-17482948)
chr7 (1-245)||(17570266-17570512)
chr7 (1-245)||(23766102-23766347)
chr7 (1-245)||(14309208-14309454)
chr7 (1-234)||(17470097-17470331)
chr7 (1-234)||(17582883-17583117)
chr7 (1-245)||(42687907-42688154)
chr7 (1-245)||(33031215-33031460)
chr7 (2-245)||(19521506-19521748)
chr7 (1-235)||(42918226-42918463)
chr7 (1-228)||(27734712-27734939)
chr7 (1-236)||(47174827-47175062)
chr7 (1-230)||(23299386-23299615)
chr7 (1-245)||(42827020-42827255)
chr7 (1-110)||(9149815-9149924)
chr7 (1-143)||(41262042-41262180)
chr7 (144-230)||(9149733-9149819)
chr7 (178-236)||(41262184-41262242)
[»] scaffold0122 (1 HSPs)
scaffold0122 (12-245)||(769-1003)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-236)||(12588-12824)
[»] scaffold1634 (1 HSPs)
scaffold1634 (1-235)||(692-926)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-236)||(307-543)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-245)||(101071-101305)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-227)||(4624-4850)
scaffold0032 (1-227)||(11073-11299)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-92)||(14997-15088)
[»] scaffold0079 (2 HSPs)
scaffold0079 (167-236)||(10434-10503)
scaffold0079 (1-39)||(10394-10432)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28973678 - 28973434
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  28973678 tgttgaaagtgcagatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttagatggcttctctagatcaaaaattaacttatcac 28973579  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28973578 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctctttgccgttatcaagtgacacttatacctt 28973479  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  28973478 ttttgagcttgtttatcgatgagtgtgattgttttctgtgttcct 28973434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 54331317 - 54331562
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54331317 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 54331416  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  54331417 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 54331516  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  54331517 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 54331562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5271949 - 5272194
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5271949 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 5272048  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||| | ||||||||| |||||||||||||| |||||| |    
T  5272049 ctacctctaacatatgttctcgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgctgttatcaagcgacatttatacat 5272148  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  5272149 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 5272194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14829185 - 14829430
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  14829185 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 14829284  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||| ||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  14829285 ctacctctaacacatgttatcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 14829384  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  14829385 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 14829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38008877 - 38008631
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38008877 tgttgaaagtgcggatcatgaacaccaaatctttatttgggagcgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 38008778  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc- 198  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||| | ||||||||||||||||||||||     
T  38008777 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttactgttatcaagcgacacttatacct 38008678  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  38008677 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 38008631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 37701271 - 37701516
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37701271 tgttgaaagtacggatcatgaacaccaaatctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaacttatcac 37701370  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  |||||||||| |||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  37701371 ctacctctaacatatgttctcggtaaaatttgaacaattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 37701470  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  37701471 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 37701516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 34056237 - 34056473
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  34056237 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 34056336  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  34056337 ctacctctaacatatgttttcggcaaaatttgaaccattggccgcctaagtattttttataacttgctctctttgtcgttatcaagcgacacttatacct 34056436  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||  |||||| |||||||||||||||||||||    
T  34056437 tttttgatcttgtttgtcgatgagtgtgattgttttc 34056473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 2776893 - 2776656
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2776893 tgttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 2776794  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtc-taagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| | |||||||||||| ||||| | ||||||||||||||||||| || |||||||||    
T  2776793 ctacctctaacatatgttcacgacaaaatttgaaccattggccgccttaagtattttttgtaacttgctctctttgccgttatcaagtgaaacttatacc 2776694  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||| |||||| || ||||||||||||||||||    
T  2776693 ttttttgagcttgtttgtcaatgagtgtgattgttttc 2776656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19831071 - 19831307
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19831071 tgttgaaagtgtggatcatgaacaccaaatatttatttggaaacgacttgaacgtgcatatttttaggtggcttctctatatcaaaaattaacttatcac 19831170  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  19831171 ctacctctaacatatgttctcggcaaaatttgaatcattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 19831270  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||| ||||    
T  19831271 tttttgagcttgtttgtcgatgagtgtgattgctttc 19831307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 17740657 - 17740423
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  17740657 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatc-aaaattagcttatcac 17740559  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| || || ||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  17740558 ctacctctaacatatgttctcggcaaaagtttaatcattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 17740459  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||| ||||    
T  17740458 tttttgagtttgtttgtcgatgagtgtgattttttt 17740423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 21353693 - 21353462
Alignment:
Q  6 aaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacc 105  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  21353693 aaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaacttatcacccacc 21353594  T
Q  106 tctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctttttt 204  Q
    |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| || |||||||||||||||    
T  21353593 tctaacatatgttcacgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagtgaaacttatacctttttt 21353494  T
Q  205 gaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||| |||||| |||||||||||||||||||||    
T  21353493 gagcttgtttgtcgatgagtgtgattgttttc 21353462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 22115725 - 22115959
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22115725 tgttgaaagtgcgaatcatgaacattaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 22115824  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| || ||||||||||    
T  22115825 ctacctctaacatatgttcacgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagtgaaacttatacct 22115924  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| | |||||||||||||||||    
T  22115925 tttttgagcttgtttgttgatgagtgtgattgttt 22115959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23479516 - 23479271
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||    
T  23479516 tgttgaaagtgcagatcatgaacaccaaatctttatttggaaatgacttgaacgtgcatgtttttaggcggcttctctagataaaaaattaacttatcac 23479417  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     |||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||| |||||| ||    
T  23479416 atacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacgcttatatct 23479317  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  23479316 tttttgagtttgtttgtcgatgagtgtgattgttttccgtgttcct 23479271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7643466 - 7643711
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatc-aaaaattaacttatca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||    
T  7643466 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattattaggcggcttctctagatcaaaaaattaacttatca 7643565  T
Q  100 cctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| ||||||| |  |||||||||||||||| || ||||||| ||||| ||||| | |||||||||||||||||||||||||||||||     
T  7643566 cctacctctaacatatgttctcagcaaaatttgaaccattgggcgcctaagta-tttttgtaacttgctctctttgccgttatcaagcgacacttatact 7643664  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| |||||||||| |||||||||| ||| ||||    
T  7643665 ttttttgagcttgtttgtcgatgagtgggattgttttccgtgttcct 7643711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 36515014 - 36515248
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||| |||||| | |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36515014 tgttaaaagtgtgaatcatgaacaccaaatctttatttggaaatgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 36515113  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| ||||| | ||||||||| ||||||||| || ||||||||||    
T  36515114 ctacctctaacatatgttcacgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgctgttatcaagtgaaacttatacct 36515213  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  36515214 tttttgagcttgtttgtcgatgagtgtgattgttt 36515248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 53343026 - 53342792
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53343026 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgaattgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 53342927  T
Q  101 ctacctctaacatctgttctcgacaa-atttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||| ||||||||| |||||||  ||| ||||||||||| | ||| ||||||||||||| ||||| | ||| |||| ||||||||||||||||||||||||    
T  53342926 ctatctctaacatatgttctcagcaatatttgaaccatggaccgcctaagtattttttgtaacttgctctatttgtcgttatcaagcgacacttatacct 53342827  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  53342826 tttttgagcttgtttgtcgatgagtgtgattgttt 53342792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 8531432 - 8531203
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  8531432 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcacct 8531333  T
Q  103 acctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc-tt 200  Q
    ||||||||||| |||||||||| ||| || |||||||| ||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||||||| ||    
T  8531332 acctctaacatatgttctcgacaaaagtttaaccattgaccgcctaagtatttttcgtaacttgttctctttgtcgttatcaagcgacacttataccttt 8531233  T
Q  201 ttttgaggttgtttatcgatgagtgtgatt 230  Q
    ||||||| |||||| ||||||| |||||||    
T  8531232 ttttgagtttgtttgtcgatgaatgtgatt 8531203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 55998401 - 55998622
Alignment:
Q  16 tcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatct 115  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  55998401 tcatcaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcacctacctctaacatat 55998500  T
Q  116 gttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgttt 214  Q
    ||||||| | ||||||||||||||| ||| ||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55998501 gttctcggcaaaatttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttataccttttttgagtttgttt 55998600  T
Q  215 atcgatgagtgtgattgttttc 236  Q
     ||||||||||| ||| |||||    
T  55998601 gtcgatgagtgtaatttttttc 55998622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 40622767 - 40622531
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40622767 tgttaaaaatgcggatcatgaagaccaaatctttatttgagaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 40622668  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||||| ||| ||||||||||| ||| ||||||||||||  ||||| | ||| |||||| ||||||||||||||||||||||    
T  40622667 ctacctctaacatatgttctcgacaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctatttgccattatcaagcgacacttatacct 40622568  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  40622567 tttttgagtttgtttgtcgatgagtgtgatttttttc 40622531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17699792 - 17699547
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||    
T  17699792 tgttgaaagtgcggatcatgaacaccaaatctttatttagaaacgacttgaagatgcatatttttaggtggcttctctagattaaaaattaacttatcac 17699693  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||| | | | ||||||||||||||||||| ||||||||||||| || || | ||||||| |||||||||| ||||||||| ||||    
T  17699692 ctacctctaacatatgtttttggcaaaatttgaaccattggccgcctaagtattttttgtagcttgctctcttttccgttatcaaacgacacttacacct 17699593  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  17699592 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 17699547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 13628669 - 13628432
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatat-ttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13628669 ttgaaagtacgaatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatattttaggtggcttctctagatcaaaaattaacttatcacc 13628570  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta--ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||| |||||||| | |||||||||||||| ||||   |||||  |||||| ||||| | ||||||| || ||||||||||||| |||||||    
T  13628569 tacctctaacatatgttctcggcaaaatttgaaccattagccgcaaaagtattttttttgtaacttgctctcttttccattatcaagcgacagttatacc 13628470  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  13628469 ttttttgagcttgtttttcgatgagtgtgattgttttc 13628432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33502675 - 33502916
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||| |||||||||||||||| |||||||    
T  33502675 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacatgcatattattaggt-gcttctctagatcaaaaattaatttatcac 33502773  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||| |||| |||| |||||||  |||| ||||| | ||||||||||||||||||||||||||||||| |    
T  33502774 ctacctctaacatatgttctcggcaaaatttgaa-cattagccgcctaagta--ttttctaacttgctctctttgccgttatcaagcgacacttatacat 33502870  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| || ||| ||||||||||||||||||||| ||| ||||    
T  33502871 tttttgagcttctttgtcgatgagtgtgattgttttccgtgttcct 33502916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 41983907 - 41984151
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||    
T  41983907 tgttgaaagagcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagat-taaaattagcttatcac 41984005  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||| |||||||| |||||| | ||||||| || |||||||||||||||||||| |    
T  41984006 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctatgtatttttcataacttgctctctttcccattatcaagcgacacttatacat 41984105  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| ||||||    |||||||||||||||||| ||| ||||    
T  41984106 tttttgagcttgtttgctaatgagtgtgattgttttccgtgttcct 41984151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 47557100 - 47557333
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||| |||| ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||| ||| || |||||||| ||||||||    
T  47557100 tgttgaaattgcgaatcatgaacaccaaatctttatttgtg---gacttgaacgtgcatatttttaggtggcttctctacataaaaaattagcttatcac 47557196  T
Q  101 ctacctctaacatctgttctcgacaaat-ttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| ||||  ||| | ||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  47557197 ctacctctaacatatgttctcggcaaaagttgcatcattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 47557296  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||| ||||||| |||||    
T  47557297 tttttgagtttgtttgtcgatgaatgtgatttttttc 47557333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7847640 - 7847514
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||    
T  7847640 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaatgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 7847541  T
Q  101 ctacctctaacatctgttctcgacaaa 127  Q
    ||||||||||||| |||||||| ||||    
T  7847540 ctacctctaacatatgttctcggcaaa 7847514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 88 - 236
Target Start/End: Original strand, 28134826 - 28134975
Alignment:
Q  88 attaacttatcacctacctctaacatctgttctcgacaaattt-gaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagc 186  Q
    |||||||||||||||||||||||||| |||||||| |||| || |||||||||| || |||| |||||||| ||||| | ||||||||||||||||||||    
T  28134826 attaacttatcacctacctctaacatatgttctcggcaaaattcgaaccattggtcgcctaattattttttgtaacttgctctctttgccgttatcaagc 28134925  T
Q  187 gacacttataccttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28134926 gacacttataccttttttgagtttgtttgtcgatgagtgtgattgttttc 28134975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 245
Target Start/End: Original strand, 35495298 - 35495463
Alignment:
Q  81 atcaaaaattaacttatcacctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgtt 179  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||  ||||||||||||| ||||  |||||||||| ||||    
T  35495298 atcaaaaattaacttatcacatacctctaacatatgttctcggcaaaatttgaaccattggccacctaagtattttttgtaacatgttctctttgtcgtt 35495397  T
Q  180 atcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||||||||||| ||||||||||| || ||| ||||||||||||||||||||| ||| ||||    
T  35495398 atcaagcgacacttattccttttttgagcttatttgtcgatgagtgtgattgttttccgtgttcct 35495463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 36857684 - 36857456
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||| |||||                
T  36857684 tgttgaaagtgcgcatcatgaacaccaaatctttatttgaaaacgacttgaacctgcatatttttaggtggcttctctagataaaaaa------------ 36857597  T
Q  101 ctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
          |||| || ||||||||  ||| ||||||| |||||||  ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  36857596 ------ctaatatatgttctcggtaaaatttgaacgattggccacctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 36857503  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcctc 246  Q
    |||||||| |||||| |||||||||||||| |||||| ||| |||||    
T  36857502 tttttgagcttgtttgtcgatgagtgtgatggttttccgtgttcctc 36857456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 7842811 - 7842707
Alignment:
Q  131 gaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    ||||||||||||||||||||||||||  ||||| | |||||||||           || |||||||||||||||||| |||||| |||||||||||||||    
T  7842811 gaaccattggccgtctaagtatttttcgtaacttgctctctttgc----------tgatacttataccttttttgagcttgtttgtcgatgagtgtgatt 7842722  T
Q  231 gttttctgtgctcct 245  Q
     ||||| ||| ||||    
T  7842721 attttccgtgttcct 7842707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 236
Target Start/End: Complemental strand, 56541372 - 56541169
Alignment:
Q  34 tatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctcgac-aaatttga 132  Q
    ||||||||||| |||||||||||||| ||||||||||| |   | |||| ||| ||||  ||| |||||| |||||||     |||| | | ||| ||||    
T  56541372 tatttgggaacaacttgaacgtgcatgtttttaggtggttgttcaagattaaagattagtttaccacctatctctaacgcacattcttggcaaaagttga 56541273  T
Q  133 accattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgt 232  Q
    |||||||| |  |||||||||||| || | | | ||||| ||| || ||||||| ||||||||||||  |||||| ||| | ||| |||||||| || ||    
T  56541272 accattggtcacctaagtatttttcatgatttgctctctctgcagtaatcaagcaacacttatacctcgtttgagtttggtcatcaatgagtgtcatcgt 56541173  T
Q  233 tttc 236  Q
    ||||    
T  56541172 tttc 56541169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16342251 - 16342007
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16342251 tgttgaaagtgcggatcatgaacaccaaatctttatttgagaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 16342152  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16342151 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 16342052  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  16342051 ttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 16342007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 35087497 - 35087742
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35087497 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 35087596  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||    
T  35087597 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttttcaagcgacacttatacct 35087696  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  35087697 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 35087742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 48977279 - 48977043
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48977279 tgttgaaagtacggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 48977180  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  48977179 ctacctctaacatatgttctcgacaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 48977080  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| || ||| |||||  ||||||||||||||    
T  48977079 tttttgagcttatttgtcgattggtgtgattgttttc 48977043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 54513377 - 54513143
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54513377 tgttgaaagtgcggatcatgaacacgaaatctttaattgagaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 54513278  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    ||||||||||||| |||||||| |||| ||  | ||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  54513277 ctacctctaacatatgttctcggcaaaatttgatcattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacctt 54513178  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||| |||||| ||||||||||||||||||||    
T  54513177 ttttgagcttgtttgtcgatgagtgtgattgtttt 54513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 50770906 - 50771151
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  50770906 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttagttggcttctctagatcaaaaattaacttatcac 50771005  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||| |||||||  |||||||||||||    
T  50771006 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccattatcaaatgacacttatacct 50771105  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||| || |||||| ||||||||||||||||||||| ||| ||||    
T  50771106 tttttaagcttgtttgtcgatgagtgtgattgttttccgtgttcct 50771151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 6103785 - 6104031
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6103785 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaagaacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 6103884  T
Q  101 c-tacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    | |||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||||||||||||||||    
T  6103885 cctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacc 6103984  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  6103985 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 6104031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 32756109 - 32755873
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  32756109 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttatgtggcttctctagatcaaaaattagattatcac 32756010  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||||||||||||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  32756009 ctacctctaacatatgttctcggtaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 32755910  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||| |||||||||||||    
T  32755909 tttttgagcttgtttgtcgatgaatgtgattgttttc 32755873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 48520699 - 48520935
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48520699 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacaacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 48520798  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| |||  |||||||||||  ||||| | ||||||||||||||| |||||||||||||||||    
T  48520799 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcttaagtatttttcgtaacttgctctctttgccgttattaagcgacacttatacct 48520898  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  48520899 tttttgagtttgtttgtcgatgagtgtgatttttttc 48520935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 49113660 - 49113415
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||    
T  49113660 tgttgcaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtgacttctctatatcaaaaattaatttatcac 49113561  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  49113560 ctacctctaacatatgttctcggcaaaatttgaatcattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 49113461  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| |||| |||||||||||||||| ||| ||||    
T  49113460 tttttgagcttgtttgtcgacgagtgtgattgttttccgtgttcct 49113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 52853103 - 52853348
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||    
T  52853103 tgttgaaagtgcggatcatgaacaccaaatctttatttagaaacgacttgaacgtgcatatttttagatgacttctctagatcaaaaattaatttatcac 52853202  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||| |||||||| |||||||| | |||||||||||||||  || |||| |||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  52853203 ctacttctaacatatgttctcggcaaaatttgaaccattgatcgcctaactattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 52853302  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  52853303 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 52853348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 31368674 - 31368910
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagat-caaaaattaacttatca 99  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  31368674 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaaattaacttatca 31368773  T
Q  100 cctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| |||||||| | |||||||||| |||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  31368774 cctacctctaacatatgttctcggcaaaatttgaactattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacc 31368873  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||||| |||||| || |||||| ||||||||||    
T  31368874 ttttttgagcttgtttgtcaatgagtatgattgtttt 31368910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 50741968 - 50741724
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  50741968 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaaaaacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 50741869  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||||||||||||||| ||| ||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||     
T  50741868 ctacctctaacatatgttctcagcaaaatttgaaccattgaccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacactcatacc- 50741770  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  50741769 tttttgagtttgtttgtggatgagtgtgattgttttccgtgttcct 50741724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 55294440 - 55294667
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| | ||||||    
T  55294440 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctttagataaaaaattagc-tatcac 55294538  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| | |||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | ||||||||||||||||||| |||||||||||||    
T  55294539 ctacctctaacatatattctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagtgacacttatacct 55294638  T
Q  200 tttttgaggttgtttatcgatgagtgtga 228  Q
    |||||||| |||||| |||||||||||||    
T  55294639 tttttgagtttgtttgtcgatgagtgtga 55294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 11597619 - 11597851
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  11597619 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaatgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 11597718  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatac-- 197  Q
    ||||||||||||| |||||||| | ||| ||||| ||||| ||| ||||||||||||  ||||| | |||| ||||||||||||||||| ||||||||      
T  11597719 ctacctctaacatatgttctcggcaaaagttgaatcattgaccgcctaagtatttttcgtaacttgctctcattgccgttatcaagcgaaacttatacat 11597818  T
Q  198 cttttttgaggttgtttatcgatgagtgtgatt 230  Q
     ||||||||| |||||| |||||||||||||||    
T  11597819 attttttgagtttgtttttcgatgagtgtgatt 11597851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 52462590 - 52462826
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  52462590 tgttgaaagtacggatcatgaacacataatctttatttgggaacgacttgaacgtgcatattttaaggtggcttctctagatcaaaaattagcttatcac 52462689  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||| ||||||||    
T  52462690 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacagttatacct 52462789  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| ||||||   || || |||||||||||||    
T  52462790 tttttgagcttgtttgctgacgattgtgattgttttc 52462826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 8243086 - 8242891
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  8243086 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgtatatttttaggtggcttctctagatcaaaaattagcttatcac 8242987  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttat 195  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||| ||||||||||||||||||||    
T  8242986 ctacctctaacatatgttctcggcaaaagttgaaccattggccgcctaagtatttttggtaacttgctctctttgacgttatcaagcgacacttat 8242891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 40824329 - 40824526
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  40824329 tgttgaaagtgcggatcataaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagattaaaaattagcttatcac 40824428  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatac 197  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||    
T  40824429 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatac 40824526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 18741887 - 18742091
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18741887 tgttaaaagtgcggatcatgaacaccaaaccttcatttggaaacgacttgaacgtgcatatttttagatggcttctctagatcaaaaattaacttatcac 18741986  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||||||||||||||||||  |||||||||||||  | |    |||||||||||||||||||||||||||||||||    
T  18741987 ctacctctaacatatgttctcagcaaaatttgaaccattggccacctaagtattttttgaaccattgtctctttgccgttatcaagcgacacttatacct 18742086  T
Q  200 ttttt 204  Q
    |||||    
T  18742087 ttttt 18742091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 21699249 - 21699476
Alignment:
Q  4 tgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcaccta 103  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  21699249 tgaaagtgcggattatgaacaccaaatctttatttggaaacgacttgaacgtgcatacttttaggtggcttctctagatcaaaaattaacttatcaccta 21699348  T
Q  104 cctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctttt 202  Q
    |||||||||| |||||||| | ||||||||||||||||| | |||| |||||||| ||||               |||||||||||||||||||||||||    
T  21699349 cctctaacatatgttctcggcaaaatttgaaccattggctgcctaaatattttttgtaac---------------ttatcaagcgacacttatacctttt 21699433  T
Q  203 ttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||| |||||| || ||| |||||||||||||| ||| ||||    
T  21699434 ttgagcttgtttgtcaatgcgtgtgattgttttccgtgttcct 21699476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 54934401 - 54934166
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||     
T  54934401 tgttgaaagtgcatatcatgaacaccaaatctttatttgggaatgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcat 54934302  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| |||||||||||| || ||||||||||||  ||||| | |||||||||           |||||||||||||    
T  54934301 ctacctctaacatatgttctcggcaaaagttgaaccattggtcgcctaagtatttttcgtaacttgctctctttgc----------tgacacttatacct 54934212  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||| ||||||||| ||||    
T  54934211 tttttgagcttgtttgtcgatgagtgtgatttttttctgtgttcct 54934166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51248899 - 51248797
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||| |    
T  51248899 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacatgcttatttttaggtgacttctctagatcaaaaattaacttatcgc 51248800  T
Q  101 cta 103  Q
    |||    
T  51248799 cta 51248797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23194784 - 23194712
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggct 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  23194784 tgttgaaagtgcggatcatgaacaccaaatatttatttgggaacgacttgatcgtacatatttttaggtggct 23194712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 51248799 - 51248708
Alignment:
Q  145 ctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||| || ||| ||||||| |||||||||||||    
T  51248799 ctaagtattttttataacttgctctctttgccgttatcaagcgacatttatacatttttagagcttatttgtcgatgaatgtgattgttttc 51248708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 23937072 - 23936884
Alignment:
Q  34 tatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctc-gacaaatttga 132  Q
    ||||||||||| |||||||||||||| ||||||||||||||  | |||||||| ||||  ||| |||| ||| ||||||  || |||| || ||||||||    
T  23937072 tatttgggaacaacttgaacgtgcatgtttttaggtggcttttccagatcaaagattagtttaccaccgaccactaacacatg-tctcggaaaaatttga 23936974  T
Q  133 accattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatga 222  Q
    ||||||||||  ||||||| |||| || ||| | |||||  || || |||||||||||||||||| |  |||||| ||| | ||||||||    
T  23936973 accattggccacctaagtacttttcatgacttgctctctccgcggtaatcaagcgacacttatacttcctttgagtttggtcatcgatga 23936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 48895 - 49139
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  48895 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttcggtggcttctctagatcaaaaattaacttatcac 48994  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  48995 ctacctctaacatatgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctctttgtcgttatcaagcgacacttatacctt 49094  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||    
T  49095 ttttgagcttgtttatcaatgagtgtgattgttttctgtgttcct 49139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 177055 - 176811
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  177055 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 176956  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  176955 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctctttgtcgttatcaagcgacacttatacctt 176856  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| |||||| |||||||||||||| ||| ||||    
T  176855 ttttgagcttgtttgtcgatgggtgtgattgttttccgtgttcct 176811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 120501 - 120256
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  120501 tgttgaaagtgcagatcatgaacactaaatctttatttgggaacgatttgaacgtgcatatttttaggtggattctctagatcaaaaattagcttatcac 120402  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     |||||||||||| ||||||| |  ||| ||||||||||| ||| ||||||||||||   |||| | |||||||| |||||||| |||||||||||||||    
T  120401 atacctctaacatatgttctctgcaaaagttgaaccattgaccgcctaagtatttttctcaacttgctctctttgtcgttatcatgcgacacttatacct 120302  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||||||| ||||    
T  120301 tttttgagcttgtttgtcgatgagtgtgattgttttctgtgttcct 120256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33907862 - 33907618
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33907862 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 33907763  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  33907762 ctacctctaacatctgttctcggcaaatttgaatcattggccgcctaagtattttttataactggctctctttgtcgttatcaagcgacacttatacctt 33907663  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  33907662 ttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 33907618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 26828130 - 26827886
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26828130 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaataaacttatcac 26828031  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26828030 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctctttgccgttatcaagcgacacttatacctt 26827931  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||  | |||||| |||||||||||||| ||| ||||    
T  26827930 ttttgagcttgcgtgtcgatgggtgtgattgttttccgtgttcct 26827886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 11707245 - 11706999
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  11707245 tgttgaaagtgcggatcatgaacaccgaatctttatttgggaacgatttgaacgtgcatatatttaggtggcttctctagatcaaaaattaacttatcac 11707146  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtatt-ttttataactggttctctttgccgttatcaagcgacacttatacc- 198  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||| |||||||||||||     
T  11707145 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtatttttttataactgactctctttgccgttatcaaacgacacttatacct 11707046  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  11707045 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 11706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 19126345 - 19126589
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  19126345 tgttgaaagtgcggatcgtgaacaccaaatctttatttggaaacgacttgaacgtgcatatttt-aggtggcttctctagatcaaaaattaacttatcac 19126443  T
Q  101 ctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  19126444 ctacctctaacatatgttctcagcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 19126543  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  19126544 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 19126589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 26822251 - 26822006
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  26822251 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttagttggcttctctagatcaaaaattaacttatcac 26822152  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||| |||||||  |||||||||||||    
T  26822151 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccattatcaaatgacacttatacct 26822052  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||| || |||||| ||||||||||||||||||||| ||| ||||    
T  26822051 tttttaagcttgtttgtcgatgagtgtgattgttttccgtgttcct 26822006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18092381 - 18092618
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  18092381 tgttgaaagtgtggatcatgaacactaaatatttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 18092480  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  18092481 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgttctctttgccgttatcaagcgacacttatacct 18092580  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttct 237  Q
    |||||||| |||||| ||||||||||||||| ||||||    
T  18092581 tttttgagtttgtttgtcgatgagtgtgatttttttct 18092618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1514646 - 1514875
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  1514646 tgttgaaagtccggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcac 1514745  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||||||| ||| ||||||||||| ||| |||||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  1514746 ctacctttaacatatgttctcgacaaaagttgaaccattgaccgcctaagtatttttcataacttgctctctttgccgttatcaagcgacacttatacct 1514845  T
Q  200 tttttgaggttgtttatcgatgagtgtgat 229  Q
    |||||||| |||||| | ||||||||||||    
T  1514846 tttttgagtttgtttgtagatgagtgtgat 1514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 16724010 - 16724255
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  16724010 tgttgaaagtgcggatcatgaacaccaaatttttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 16724109  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||| ||||||||  |||||||| | ||||||||| ||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||| |    
T  16724110 ctatctctaacacatgttctcgtcaaaatttgaatcattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacat 16724209  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||  ||||||||||||||| ||||| ||| ||||    
T  16724210 tttttgagcttgttagtcgatgagtgtgattattttccgtgttcct 16724255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 42886005 - 42885760
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| | ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  42886005 tgttgaaagtgtgaatcattaacaccaaatctttatttagaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcat 42885906  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||| ||| | ||||||||| ||||||||| ||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  42885905 ctacctctaacatatgttatcggcaaaatttgaatcattggccgcctaagtattttttgtaacttgctctctttgctgttatcaagcgacacttatacct 42885806  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||| || |||||| |||||||||||||||||||| |||| ||||    
T  42885805 tttttaagcttgtttgtcgatgagtgtgattgttttatgtgttcct 42885760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 45204680 - 45204924
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||  |||    
T  45204680 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgatcgtgcatatttttaggtggcttctctagatcaaaaattaacttgccac 45204779  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    || |||||||||| | |||||| | |||||||||| |||||||| ||||||||||||| ||||| | ||| |||| | ||||||||||||||||||||||    
T  45204780 ctccctctaacatat-ttctcggcaaaatttgaactattggccgcctaagtattttttgtaacttgctctttttgtccttatcaagcgacacttatacct 45204878  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  45204879 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 45204924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 36632711 - 36632946
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  36632711 tgttgaaagtgaggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttgtcac 36632810  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc- 198  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||| ||||  ||||| | | |||||| |||||||||||||||||||||||     
T  36632811 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagta-ttttcgtaacttgctatctttgtcgttatcaagcgacacttatacct 36632909  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  36632910 ttttttgagcttgtttgtcgatgagtgtgattgtttt 36632946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 30570209 - 30570454
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  30570209 tgttgaaagtgcggatcacgaacaccaaatctttatttggaaacgacatgaacgtgcatatttttatgtggcttctctagatcaaaaattaacttatcac 30570308  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     ||||| |||||| |||| ||| | |||||||||| |||||||| ||||||||||||| ||||| | |||||||  ||||||||||| ||||||| ||||    
T  30570309 atacctataacatatgttatcggcaaaatttgaactattggccgcctaagtattttttgtaacttgctctctttatcgttatcaagcaacacttaaacct 30570408  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  30570409 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 30570454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21098320 - 21098090
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  21098320 tgttgaaagtgcggatcatgaacaccaaatctttatttagaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaatttatcac 21098221  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||   |          |||||||| ||||||||||||||    
T  21098220 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacatat----------gttatcaaacgacacttatacct 21098131  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtg 240  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  21098130 tttttgagcttgtttgtcgatgagtgtgattgttttctgtg 21098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 33663458 - 33663691
Alignment:
Q  2 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||     
T  33663458 gttgaaagtgcggattatgaacaccaaatctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaacttatcaca 33663557  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtc-taagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||||||| |||||||| | ||||||||| ||||||||  | |||||||||||| ||||| | ||| |||| ||||||||||||   || ||||||    
T  33663558 tacctctaacatatgttctcggcaaaatttgaatcattggccaccttaagtattttttgtaacttgctctttttgtcgttatcaagcg---ctcatacct 33663654  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||| || |||||| ||||||| |||||||||||||    
T  33663655 tttttaagcttgtttgtcgatgattgtgattgttttc 33663691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 45399418 - 45399183
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||||    
T  45399418 tgttgaaagtgcggatcatgaacacaaaatctttatttgggaatgacttgaacgtgcatatttttgggtggcttctctaggtcaaaaattagcttatcac 45399319  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||||| || |||||||| | ||| ||||||||||| ||  ||| ||||||||  |||||   |||||||||          ||||||||||||||    
T  45399318 ctacctctaatatatgttctcggcaaaagttgaaccattgaccacctacgtatttttcgtaacttactctctttgc----------cgacacttatacct 45399229  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  45399228 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 45399183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 35285952 - 35286173
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||||    
T  35285952 tgttgaacgtgcggatcatgaataccaaatctttatttgggaatgacttgaacgtgcatatttttgggtggcttctctaggtcaaaaattagcttatcac 35286051  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||    ||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||          ||||||||||||||    
T  35286052 ctacct----catatgttctcggcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacct 35286137  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||||||||    
T  35286138 tttttgagcttgtttgtcgatgagtgtgattgtttt 35286173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11448362 - 11448241
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  11448362 tgttgaaagtggggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttttctagataaaaaattaacttatcac 11448263  T
Q  101 ctacctctaacatctgttctcg 122  Q
    ||||||||||||| ||||||||    
T  11448262 ctacctctaacatatgttctcg 11448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19167519 - 19167657
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||    
T  19167519 tgttgaaagtgcggataatgaacaccaaatctttatttgaaaacgacttgaacatgtatatttttaggtggtttctctagatcaaaaattaacttatcac 19167618  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccatt 138  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  19167619 ctacctctaacatatgttctcgacaaaatttgaaccatt 19167657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 27364497 - 27364609
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  27364497 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaatgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 27364596  T
Q  101 ctacctctaacat 113  Q
    |||||||||||||    
T  27364597 ctacctctaacat 27364609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 4812136 - 4811943
Alignment:
Q  43 acgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctc-gacaaatttgaaccattggc 141  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||  ||||||| |  ||| || |||||||| |    
T  4812136 acgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttataacctacctctaacaaatgttctcagcaaaagttaaaccattgac 4812037  T
Q  142 cgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttctgtgc 241  Q
    || ||||||| ||||  ||||| | |||||||||          |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||     
T  4812036 cgcctaagtaattttcgtaacttgctctctttgc----------cgacacttataccttttttgagcttgtttgtcgatgagtgtgattgttttccgtgt 4811947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 5252963 - 5252901
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattttt 65  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5252963 ttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatattttt 5252901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 30572285 - 30572334
Alignment:
Q  196 accttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  30572285 accttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 30572334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 38994024 - 38993789
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38994024 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggtttctctagatcaaaaattaacttatcac 38993925  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  38993924 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctttttgccgttatcaagcgacacttatacctt 38993825  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||| |||||| |||||||||||||||||||||    
T  38993824 ttttgagcttgtttgtcgatgagtgtgattgttttc 38993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 44600041 - 44599806
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44600041 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggtttctctagatcaaaaattaacttatcac 44599942  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  44599941 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctttttgccgttatcaagcgacacttatacctt 44599842  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||| |||||| |||||||||||||||||||||    
T  44599841 ttttgagcttgtttgtcgatgagtgtgattgttttc 44599806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14078477 - 14078722
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  14078477 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtacatatttttaggtggcttctctagataaaaaattaacttatcac 14078576  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  14078577 ctacctctaacacatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 14078676  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  14078677 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 14078722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 9761606 - 9761373
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacct 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9761606 ttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcacct 9761507  T
Q  103 acctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttt 201  Q
    ||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||| | |||||||||||||||||||| |||    
T  9761506 acctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtctttatcaagcgacacttatactttt 9761407  T
Q  202 tttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||| |||||| ||||||||||||||||||||    
T  9761406 tttgagcttgtttgtcgatgagtgtgattgtttt 9761373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 19395210 - 19395454
Alignment:
Q  2 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  19395210 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaatttatcacc 19395309  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||| |||||||| | ||||||||||||||||||| |||| |||||||| |||||   |||||||| |||||||||||||||||||||||||    
T  19395310 tacctctaacatatgttctcggcgaaatttgaaccattggccgcctaaatattttttgtaactttctctctttgtcgttatcaagcgacacttatacctt 19395409  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  19395410 ttttgagcttgtttgtggatgagtgtgattgttttccgtgttcct 19395454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27273572 - 27273328
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27273572 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgaattgaacgtgcatatttttatgtggcttctctagatcaaaaattaacttatcac 27273473  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| |||||| |||||| ||||| | ||||||||||||||||||| ||||||||||||||    
T  27273472 ctacctctaacatatgttctcgaaaaatttaaaccattggccgcctaagttttttttgtaacttgctctctttgccgttatcaagtgacacttatacctt 27273373  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||| ||||||||||||||| ||| ||||    
T  27273372 ttttgagcttgtttgtcgattagtgtgattgttttccgtgttcct 27273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 6477140 - 6477385
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  6477140 tgttgaaagtgcggatcatgaacaccaaatctttgtttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 6477239  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||| |   ||||||||||||||||||||||||||| |||||    
T  6477240 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaaattactctctttgccgttatcaagcgacacttgtacct 6477339  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  6477340 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 6477385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33423906 - 33424151
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  33423906 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagataaaaaattaacttatcac 33424005  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||| | ||||||||||||| ||| | | ||||||||||||||||||| |||||||||||||    
T  33424006 ctacctctaacatatgttctcggcaaaatttgaaccattggctgcctaagtattttttgtaatttgctctctttgccgttatcaagtgacacttatacct 33424105  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  33424106 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 33424151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 36597682 - 36597927
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36597682 tgttgaaagtgcggatcatgaacactcaatctttatttggaaacgccttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 36597781  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     |||||||||||| |||||||| | ||||||||||||||| ||| ||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||    
T  36597782 ttacctctaacatatgttctcggcaaaatttgaaccattgcccgcctaagtattttttgtaacttgccctctttgccgttatcaagcgacacttatacct 36597881  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  36597882 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 36597927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38962509 - 38962264
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  38962509 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaatgacttgaacgtgcatatttttaggtgacttctctagatcaaaaattaacttatcac 38962410  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||||| | ||||||||||||||||||  ||||||||||||| ||||| | |||||||| ||||||||| ||||||||||||||    
T  38962409 ctacctttaacatatgttctcggcaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgtcgttatcaaacgacacttatacct 38962310  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||| ||||||||||||||| ||| ||||    
T  38962309 tttttgagcttgtttgtcgattagtgtgattgttttccgtgttcct 38962264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38992853 - 38992608
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  38992853 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaatgacttgaacgtgcatatttttaggtgacttctctagatcaaaaattaacttatcac 38992754  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||||| | ||||||||||||||||||  ||||||||||||| ||||| | |||||||| ||||||||| ||||||||||||||    
T  38992753 ctacctttaacatatgttctcggcaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgtcgttatcaaacgacacttatacct 38992654  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||| ||||||||||||||| ||| ||||    
T  38992653 tttttgagcttgtttgtcgattagtgtgattgttttccgtgttcct 38992608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 42810580 - 42810816
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  42810580 tgttgaaagtgcggatcatgaacaccaaatatttatttggaaacgacttgaatgtgcatatttttaggtggcttctctagattaaaaattaacttatcac 42810679  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||| | ||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||  ||||||||||||||||||||||||    
T  42810680 ctaaccctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttttcgttatcaagcgacacttatacct 42810779  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  42810780 tttttgagcttgtttgtcgatgagtgtgattgttttc 42810816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 41977839 - 41977603
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  41977839 tgttgaaaatgcggatcatgaacaccaaatctttatttgggaatgacttgtacgtgcatatttttaggtggcttctctagataaaaaattagcttatcac 41977740  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  41977739 ctacctctaacatatgttctcagcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 41977640  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  41977639 tttttgagtttgtttgtcgatgagtgtgatttttttc 41977603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 44382447 - 44382683
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  44382447 tgttgaaagtgcggatcatgaacaccaaatctttatttagtaacgacttgaacgtgcatatttttaggtggcttctatagatcaaaaattagcttatcac 44382546  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||| | | ||| ||||||||||| ||| ||| ||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  44382547 ctacctctaacatatgttcttggcaaaagttgaaccattgaccgcctaggtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 44382646  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| || ||| ||||||||||||||| |||||    
T  44382647 tttttgagtttatttgtcgatgagtgtgatttttttc 44382683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 3751454 - 3751223
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3751454 tgttgaaagtgtggatcatgaacaccaaatctttatttgggaacgaattaaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 3751355  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | || ||||||||||||||||||||||||||||||    
T  3751354 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctccctttgccgttatcaagcgacacttatacct 3751255  T
Q  200 tttttgaggttgtttat-cgatgagtgtgatt 230  Q
    |||||||| |||||| | ||||||||||||||    
T  3751254 tttttgagtttgtttgtccgatgagtgtgatt 3751223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 245
Target Start/End: Original strand, 45293221 - 45293464
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacct 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  45293221 ttgaaagtgcggatcatgaacaccaaatctttatttgagaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaatgagcttttcacct 45293320  T
Q  103 acctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttt 201  Q
    ||||||||||| || |||| |  ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||||||||||||||||  ||||||||||    
T  45293321 acctctaacatatgctctcagcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacctttataccttt 45293420  T
Q  202 tttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| |||||| ||||||||| ||||||||||| ||| ||||    
T  45293421 tttgagcttgtttgtcgatgagtatgattgttttccgtgttcct 45293464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 23522307 - 23522538
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||   |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  23522307 tgttgaaagtgcgaatcatgaacaccaattctttatttggaaac---ttgaacgtgcatatttttaggtggcttctctagattaaaaattaacttatcac 23522403  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||| ||||||||||||| ||||| | ||||||||||||||||||| || ||||||||||    
T  23522404 ctacctctaacatatgttctcgtcaaaatttgaaccattttccgcctaagtattttttgtaacttgctctctttgccgttatcaagtgaaacttatacct 23522503  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| | |||||||||||||||||    
T  23522504 tttttgagcttgtttgttgatgagtgtgattgttt 23522538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 19248455 - 19248209
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||  || ||||    
T  19248455 tgttgaaagtgtggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggtttctcttgatcaaaaattagtttctcac 19248356  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| ||||||| |  ||| ||||||||||||||| ||||||| |||||| ||| | | ||||||||| ||||||||||||| ||||||||    
T  19248355 ctacctctaacatatgttctcagcaaaagttgaaccattggccgcctaagtatttttttgtaaattgctctctttgctgttatcaagcgacccttatacc 19248256  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| || |||||| ||||||||| ||||||||||||||| ||||    
T  19248255 tttttttagcttgtttgtcgatgagtatgattgttttctgtgttcct 19248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 19321639 - 19321393
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||  || ||||    
T  19321639 tgttgaaagtgtggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggtttctcttgatcaaaaattagtttctcac 19321540  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| ||||||| |  ||| ||||||||||||||| ||||||| |||||| ||| | | ||||||||| ||||||||||||| ||||||||    
T  19321539 ctacctctaacatatgttctcagcaaaagttgaaccattggccgcctaagtatttttttgtaaattgctctctttgctgttatcaagcgacccttatacc 19321440  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| || |||||| ||||||||| ||||||||||||||| ||||    
T  19321439 tttttttagcttgtttgtcgatgagtatgattgttttctgtgttcct 19321393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 41629229 - 41628996
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||||||||| | |||| ||||| |||||||| ||||||||||||||||||||||||    
T  41629229 tgttgaaagtgcggatcatgaacattagatctttatttggaaacgacttgaacatccatacttttatgtggcttctctagatcaaaaattaacttatcac 41629130  T
Q  101 ctacctctaacatctgttc-tcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| | ||| ||| |||| |||||||||||||||| |||||||  |||| ||||| | |||||||||| ||||||||||| |||||||||    
T  41629129 ctacctctaacatatattcttcggcaaagtttgaaccattggccgcctaagta--ttttgtaacttgctctctttgccattatcaagcga-acttatacc 41629033  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||||| |||||| |||||||| |||||||||||    
T  41629032 ttttttgagcttgtttgtcgatgagcgtgattgtttt 41628996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 22332374 - 22332537
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22332374 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 22332473  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataact 163  Q
     |||||||||||| |||||||||| |||||| |||||||| | | ||||||||||||| |||||    
T  22332474 atacctctaacatatgttctcgacaaaatttaaaccattgtctgcctaagtattttttctaact 22332537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 41156935 - 41156750
Alignment:
Q  46 acttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctcgacaaat-ttgaaccattggccgt 144  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||  ||||| ||||| |||     
T  41156935 acttgaacgtgcatatttttaggtggtttctctagatcaaaaattagcttatcacctacctctaacatatgttctcggcaaaagttgaatcattgaccgc 41156836  T
Q  145 ctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  41156835 ctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttataccttttctgagtttgtttgtcgatgagtgtgatt 41156750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5835936 - 5835816
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  5835936 tgttgaaagtgcggatcatgaacaccaaatctttatttagaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaatttatcac 5835837  T
Q  101 ctacctctaacatctgttctc 121  Q
    ||||||||||||| |||||||    
T  5835836 ctacctctaacatatgttctc 5835816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 22946447 - 22946668
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||  |||||||||| ||||||||    
T  22946447 tgttgaacgtgcggatcatgaataccaaatctttatttgggaatgacttgaacgtgcatattttttggtggcttctctaagtcaaaaattagcttatcac 22946546  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||    ||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||          ||||||||||||||    
T  22946547 ctacct----catatgttctcggcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacct 22946632  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||| ||||||||||||||||    
T  22946633 tttttgagcttgtttgtcggtgagtgtgattgtttt 22946668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 94 - 245
Target Start/End: Complemental strand, 30826702 - 30826550
Alignment:
Q  94 ttatcacctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacact 192  Q
    |||||||||||||||||||| |||||||| |||| |||||| ||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  30826702 ttatcacctacctctaacatatgttctcggcaaaatttgaatcattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacact 30826603  T
Q  193 tataccttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||||||||| ||||||  |||||||||||||||||||| ||| ||||    
T  30826602 tataccttttttgagcttgtttgccgatgagtgtgattgttttccgtgttcct 30826550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 12760672 - 12760526
Alignment:
Q  84 aaaaattaacttatcacctacctctaacatctgttctcgacaaat-ttgaaccattggccgtctaagtattttttataactggttctctttgccgttatc 182  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||  ||||||||||| ||  ||||||||||||  ||||| | ||||||||||||||||    
T  12760672 aaaaattagcttatcacctacctctaacatatgttctcggcaaaagttgaaccattgaccc-ctaagtatttttcgtaacttgctctctttgccgttatc 12760574  T
Q  183 aagcgacacttataccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  12760573 aagcgacacttataccttttttgagtttgtttgtcgatgagtgtgatt 12760526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 22332889 - 22332967
Alignment:
Q  167 tctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||    
T  22332889 tctctttgccgttatcaagcgacacttataccttttttgagcttgtttgtcgatgaatgtgattgttttctgtgttcct 22332967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 42785507 - 42785443
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttag 67  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42785507 ttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttag 42785443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41533506 - 41533571
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattttta 66  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  41533506 tgttgaaagtgcggatcatgaacaccaaatatttatttgggaactacttgaacgtgcatattttta 41533571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30826734 - 30826699
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttat 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  30826734 tgttgaaagtgcggatcatgaacaccaaatctttat 30826699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 3079 - 3323
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  3079 tgttgaaagtgcggatcatgaacaccaaatctttattttggaacgctttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcat 3178  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3179 ctacctctaacatctgttctcggcaaatttgaactattggccgcctaagtattttttataactggctctctttgccgttatcaagcgacacttatacctt 3278  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||| ||||||||||||||| ||| ||||    
T  3279 ttttgagcttgtttttcgataagtgtgattgttttccgtgttcct 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 1072930 - 1073175
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  1072930 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 1073029  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  1073030 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 1073129  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  1073130 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 1073175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 30044788 - 30044543
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattttta-ggtggcttccctagatcaaaaattaacttatca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  30044788 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttccggtggcttctctagatcaaaaattaacttatca 30044689  T
Q  100 cctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||    
T  30044688 cctacctctaacatatgttctcggcaaatttaaaccattggccgcctaagtattttttataactgactctctttgtcgttatcaaacgacacttatacct 30044589  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||    
T  30044588 tttttgagcttgtttatcaatgagtgtgattgttttctgtgttcct 30044543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 15276216 - 15275971
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15276216 tgttgaaagtgcggatcatgaacaccaaatctttagttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 15276117  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||||| ||||||||||||||||||||| |    
T  15276116 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgctgttatcaagcgacacttatactt 15276017  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  15276016 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 15275971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18598652 - 18598898
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaa-ttaacttatca 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  18598652 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaaattaacttatca 18598751  T
Q  100 cctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  18598752 cctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacc 18598851  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  18598852 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 18598898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 34856532 - 34856287
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  34856532 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 34856433  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||||||| | ||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  34856432 ctacctctaacacatgttctcggcaaaatttgaaccattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 34856333  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  34856332 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 34856287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 2521745 - 2521509
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  2521745 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatattttaaggtggcttctctagataaaaaattaacttatcac 2521646  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||||||||| | ||    
T  2521645 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttacatct 2521546  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  2521545 tttttgagcttgtttgtcgatgagtgtgattgttttc 2521509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34321675 - 34321435
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  || ||||    
T  34321675 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatgaaaaattagtttttcac 34321576  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  34321575 ctacctctaacatatgttctcagcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 34321476  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtg 240  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  34321475 tttttgagcttgtttgtcgatgagtgtgattgttttctgtg 34321435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 14887605 - 14887850
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  14887605 tgttgaaagtgaggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 14887704  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||| || ||| |||||||||||||||||    
T  14887705 ctacctctaacacatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgacgatataaagcgacacttatacct 14887804  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||| ||||||||||||| ||| ||||    
T  14887805 tttttgagcttgtttgtcgatgaatgtgattgttttccgtgttcct 14887850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 18312371 - 18312137
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  18312371 tgttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaatttatcac 18312272  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||| ||||| ||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||| || ||||||||||    
T  18312271 ctacctctaacatatgttatcgacaaaatttgaaccattgactgcctaagtattttttgtaacttgatctctttgccgttatcaagtgaaacttatacct 18312172  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  18312171 tttttgagcttgtttgtcgatgagtgtgattgttt 18312137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 33321120 - 33321350
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  33321120 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 33321219  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| |||| |||||||  ||||| | ||| |||||||||||||||||||| ||||||||    
T  33321220 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaaatatttttcgtaacttgctctttttgccgttatcaagcgacatttatacct 33321319  T
Q  200 tttttgaggttgtttatcgatgagtgtgatt 230  Q
    |||||||| |||||| |||||||||||||||    
T  33321320 tttttgagtttgtttgtcgatgagtgtgatt 33321350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 35041668 - 35041434
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35041668 tgttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 35041569  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    | ||||||||||| ||||| |||| ||||||||||||||||||  ||||||||||||| ||||| | ||||||||||||||||||| || |||||||| |    
T  35041568 ccacctctaacatatgttcacgacaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgccgttatcaagtgaaacttatacat 35041469  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  35041468 tttttgagcttgtttgtcgatgagtgtgattgttt 35041434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17940100 - 17939855
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  17940100 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaacttaacttatcac 17940001  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | |||||| |||||||| |||  |||||| |||||| ||||| | |||||||| |||||||||| |||||| |||||    
T  17940000 ctacctctaacatatgttctcggcaaaatttaaaccattgaccgcataagtatttttttgtaacttgctctctttgtcgttatcaag-gacactcatacc 17939902  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  17939901 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 17939855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 4425065 - 4424820
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  4425065 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttctaggtgccttctctagatcaaaaattaacttatcac 4424966  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||| |||| ||||||| |  ||||||| |||||||| || ||||||||||||| ||||| | | |||||| ||||||||||||||||||||||||    
T  4424965 ctacctcttacatatgttctcagcaaaatttgtaccattggtcgcctaagtattttttgtaacttgctttctttgtcgttatcaagcgacacttatacct 4424866  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    | |||||| |||||| ||||||||||| ||||||||| ||| ||||    
T  4424865 tgtttgagcttgtttgtcgatgagtgtaattgttttccgtgttcct 4424820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22373510 - 22373753
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22373510 tgttgaaagtgcagatcatgaacaccaaatctttatttgggaatgacctgaacgtgcatatttttaggtggcttctctaaatcaaaaattaacttatcac 22373609  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| | |||||||| |||||||||||||||||||  |||||| ||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  22373610 ctacctctaacatat-ttctcgacaaaatttgaaccattggccgcttaagta-tttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 22373707  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    || ||||| |||||| | ||||||||||||||||||| ||| ||||    
T  22373708 ttattgagcttgtttgttgatgagtgtgattgttttccgtgttcct 22373753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 7222891 - 7222645
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattttt-aggtggcttccctagatcaaaaattaacttatca 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||||    
T  7222891 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaatgtgcatattttttaggtggcttctctagatcaaaaattaatttatca 7222792  T
Q  100 cctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    | ||||| |||||| |||||||| |||| |||||||||||| ||| ||||||||||||| ||||| | ||| ||||| || |||||||||| |||||| |    
T  7222791 cttacctataacatatgttctcggcaaaatttgaaccattgaccgcctaagtattttttgtaacttgctctttttgctgtaatcaagcgacgcttatatc 7222692  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||  |||||| ||||||||||||||||||||| ||| ||||    
T  7222691 ttttttgaacttgtttgtcgatgagtgtgattgttttccgtgttcct 7222645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 37 - 236
Target Start/End: Complemental strand, 14832061 - 14831861
Alignment:
Q  37 ttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctcgac-aaatttgaacc 135  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||| ||| |||||||    
T  14832061 ttgggaacgacttgaacgcgcatatttttaggtggcttctctagatcaaaaattagcttatcacctacctctaacatatgttcttgacaaaagttgaacc 14831962  T
Q  136 attggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||| ||| ||||||||||||  |||||   ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||||    
T  14831961 attgaccgcctaagtatttttcgtaactttctctctttgccgttatcaagcgacacttataccttttttgagtttttttgtcgatgagtgtgattttttt 14831862  T
Q  236 c 236  Q
    |    
T  14831861 c 14831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21800121 - 21799878
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||    
T  21800121 tgttgaaagtgcggatcatgaac--caaatctttatttgaaaacgacttgaacgtgcatatttttatgtgacttctctagataaaaaattaacttatcac 21800024  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||| |  |||| ||| | |||||| |||||||||||| ||||||| |||||| ||||| | || ||||||||||||||||||||||||||| |    
T  21800023 ctacctctaatacatgttttcgtcaaaatttaaaccattggccgcctaagtatttttttgtaacttgctcactttgccgttatcaagcgacacttatagc 21799924  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||| ||||||||||| ||||| ||| ||||    
T  21799923 ttttttgagcttgtttgtcg-tgagtgtgattattttccgtgttcct 21799878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11933149 - 11933235
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaa 87  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  11933149 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaa 11933235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33814571 - 33814485
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaa 87  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  33814571 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtgtcttctctagatcaaaa 33814485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25540512 - 25540450
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattt 63  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25540512 tgttgaaagtgtagatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatattt 25540450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 18814823 - 18814578
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18814823 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 18814724  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  18814723 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 18814624  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  18814623 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 18814578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 34688191 - 34687946
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  34688191 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 34688092  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  34688091 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 34687992  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  34687991 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 34687946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 44406963 - 44406730
Alignment:
Q  2 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44406963 gttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcacc 44406864  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||| || |||||||||||    
T  44406863 tacctctaacatatgttctcgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagtgaaacttatacctt 44406764  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    ||||||| |||||| |||||||||||||||||||    
T  44406763 ttttgagcttgtttgtcgatgagtgtgattgttt 44406730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 41962575 - 41962811
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  41962575 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 41962674  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | |||||| |||||||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||    
T  41962675 ctacctctaacatatgttctcggcaaaatttaaaccattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacgcttatacct 41962774  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  41962775 tttttgagcttgtttgtcgatgagtgtgattgttttc 41962811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34692719 - 34692484
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  34692719 tgttgaaagtgcggattatgaacaccaaatctttatttggaaacgacttgaacgtacatatttttaggtggcttctctagatcaaaaattaacttatcac 34692620  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | |||||||||| |||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  34692619 ctacctctaacatatgttctcggcaaaatttgaactattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 34692520  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| | ||||||||||||||||||    
T  34692519 tttttgagcttgtttgttgatgagtgtgattgtttt 34692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31620293 - 31620048
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  31620293 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 31620194  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||| ||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||    
T  31620193 ctacctctaacacatgttatcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgctatcaagcgacacttatacct 31620094  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||| ||||||||||||| ||| ||||    
T  31620093 tttttgagcttgtttgtcgatgaatgtgattgttttccgtgttcct 31620048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 38844854 - 38845099
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  38844854 tgttgaaagtgcggatcatgaacaccaaatctttatttgaaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaaattatcac 38844953  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||| ||||||||||||| ||||| | ||||| |||||||||||||||||||||||||||    
T  38844954 ctacctcaaacatatgttctcggaaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctgtgccgttatcaagcgacacttatacct 38845053  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| |||||||||||||| |||||| ||| ||||    
T  38845054 tttttgagcttgtttgtcgatgagtgtgatcgttttccgtgttcct 38845099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 41829697 - 41829941
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||    
T  41829697 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagat-aaaaattaacttattac 41829795  T
Q  101 ctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||    
T  41829796 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttttaacttgctctctttgccgttatcaagcgacacttatatct 41829895  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||| ||||||||||||| ||| ||||    
T  41829896 tttttgagcttgtttgtcgatgaatgtgattgttttccgtgttcct 41829941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 10694470 - 10694705
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10694470 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacttgcatatttttaggtggcttctctagatcaaaaattagcttatcac 10694569  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  10694570 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 10694669  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| ||| || ||||||||||||||||||||    
T  10694670 tttttgagtttgcttgtcgatgagtgtgattgtttt 10694705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 52521264 - 52521509
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52521264 tgttgaaagtgcggattgtgaacaccaaatctttatttgaaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 52521363  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    || |||||||||| | ||||| |  ||||||||| ||||||| | ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  52521364 ctgcctctaacatatcttctcagcaaaatttgaaacattggctgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 52521463  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||| ||||||||| ||| ||||    
T  52521464 tttttgagcttgtttgtcgatgagtgtaattgttttccgtgttcct 52521509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 50561653 - 50561419
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  50561653 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttatcac 50561554  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| ||||||||||| ||| ||||||||||||  |||||   ||||||||| ||||||||||||||||||||||     
T  50561553 ctacctctaacatatgttctcagcaaaagttgaaccattgaccgcctaagtatttttcgtaacttactctctttgcagttatcaagcgacacttatacc- 50561455  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||| ||| ||| ||||||||||||||| |||||    
T  50561454 tttttga-gttttttgtcgatgagtgtgatttttttc 50561419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 48340919 - 48340688
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||  |||    
T  48340919 tgttcaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgatcgtgcatatttttaggtggcttctctagatcaaaaattaacttgccac 48340820  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||             ||||||||||||||||| ||||||||||||| ||||| | |||||||| ||||||||||||||| |||||||||    
T  48340819 ctacctctaacat-------------atttgaaccattggccgcctaagtattttttttaacttgctctctttgtcgttatcaagcgacatttatacctt 48340733  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  48340732 ttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 48340688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 52310435 - 52310203
Alignment:
Q  4 tgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcaccta 103  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| | |||||||||    
T  52310435 tgaaagtgcgaatcatgaacaccaa-tctttatttgggaacgacttgaacatgcatatttttaggtggcttctctggatcaaaaattagcctatcaccta 52310337  T
Q  104 cctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctttt 202  Q
    |||||||||| |||||||| | ||| |||||| |||| ||| ||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||    
T  52310336 cctctaacatatgttctcggcaaaagttgaacaattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacctttt 52310237  T
Q  203 ttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||  |||||| ||||||||||||||| |||||    
T  52310236 ttgattttgtttgtcgatgagtgtgatttttttc 52310203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 236
Target Start/End: Complemental strand, 47135982 - 47135769
Alignment:
Q  24 accaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctcga 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||     
T  47135982 accaaatttttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcacctacctctaacatatgttctcgg 47135883  T
Q  124 c-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatga 222  Q
    | ||| ||||||||||| ||| ||||||||||||  ||||| | | ||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47135882 caaaagttgaaccattgaccgcctaagtatttttcgtaacttgctatctttgccgttatcaagcgacacttataccttttttgagtttgtttgtcgatga 47135783  T
Q  223 gtgtgattgttttc 236  Q
    || ||||| |||||    
T  47135782 gtttgatttttttc 47135769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 36682643 - 36682408
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  36682643 tgttgaaagtgcgaatcatgaacaccaaatatttatttgggaatgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 36682544  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||          ||||||||||||||    
T  36682543 ctacctctaacatatgttctcggcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacct 36682454  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  36682453 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 36682408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 45005374 - 45005139
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  45005374 tgttgaaagtgcggatcatgaacaccaaatatttatttgggaatgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 45005275  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||          |||||||||||| |    
T  45005274 ctacctctaacatatgttctcggcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacat 45005185  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  45005184 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 45005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17672054 - 17671819
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17672054 tgttgaaagtgcagatcatgaacaccaaatctttttttgggaatgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 17671955  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||| ||||||  ||||| | |||||||||          ||||||||||||||    
T  17671954 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagaatttttcttaacttgctctctttgc----------cgacacttatacct 17671865  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  17671864 tttttgagcttgtttgtcgataagtgtgattgttttctgtgttcct 17671819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 12245541 - 12245763
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| | |||||||| ||||||||    
T  12245541 tgttgaacgtgcggatcatgaataccaaatctttatttgggaatgacttgaacgtgcatatttttaggtggcttctttaggtaaaaaattagcttatcac 12245640  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtatttttt-ataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||    ||| |||||||| | ||| ||||||||||||||| |||||||||||||  ||||| | |||||||||          |||||||||||||    
T  12245641 ctacct----catatgttctcggcaaaagttgaaccattggccgcctaagtattttttcgtaacttgctctctttgc----------cgacacttatacc 12245726  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  12245727 ttttttgagtttgtttgtcgatgagtgtgattgtttt 12245763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 37 - 234
Target Start/End: Original strand, 16031279 - 16031467
Alignment:
Q  37 ttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaacatctgttctcgac-aaatttgaacc 135  Q
    ||||||| |||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| |||||||| | ||| ||||| |    
T  16031279 ttgggaatgacttgaatgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcacctacctctaacatatgttctcggcaaaagttgaatc 16031378  T
Q  136 attggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| ||||||||||||  ||||| | |||||||||          |||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  16031379 attggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacctttttcgagcttgtttgtcgatgagtgtgattgttt 16031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17709450 - 17709605
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||| |||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||  |||||||||||||| ||||| ||    
T  17709450 tgttcaaagtgtggatcatgaacacaatatctttatttgggaacggcttgaacgtgcatatttttatgtgccttctatagatcaaaaattagcttattac 17709549  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtatttt 155  Q
    ||||||||||||| |||||||| | ||| ||||| ||||||||| |||||||||||    
T  17709550 ctacctctaacatatgttctcggcaaaagttgaagcattggccgcctaagtatttt 17709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 51965460 - 51965608
Alignment:
Q  83 caaaaattaacttatcacctacctctaacatctgttctcgacaaat-ttgaaccattggccgtctaagtattttttataactggttctctttgccgttat 181  Q
    ||||||||| ||| ||||||||||||||||| |||||||| ||||  ||||| ||||| |||  |||||||||||  ||||| | |||||||||||||||    
T  51965460 caaaaattagcttctcacctacctctaacatatgttctcggcaaaagttgaatcattgaccgcgtaagtatttttcgtaacttgctctctttgccgttat 51965559  T
Q  182 caagcgacacttataccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    |||||||||||||||||||| ||||| |||||| | |||||||||||||    
T  51965560 caagcgacacttatacctttcttgagtttgtttgttgatgagtgtgatt 51965608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 7286239 - 7285994
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7286239 tgttgaaagtgcggatcatgaacaccaactctttatttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaacttatcac 7286140  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  7286139 ctacctctaacatatgttctcggcgaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 7286040  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  7286039 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 7285994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 34374041 - 34374261
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  34374041 tgttgaaagtacggatcatgaacaccaaatctttatttgtgaacgatttgaacgtgcatatttttaggtggtttctctagatcaaaaattaacttatcac 34374140  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34374141 ctacctctaacatctgttctcggcaaatttgaaccattggccgcctaagtattttttataactggctctctttgccgttatcaagcgacacttatacctt 34374240  T
Q  201 ttttgaggttgtttatcgatg 221  Q
    ||||||| |||||| ||||||    
T  34374241 ttttgagcttgtttgtcgatg 34374261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21030671 - 21030435
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  21030671 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 21030572  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc- 198  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||     
T  21030571 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgttctctttgtcgttatcaagcgacacttatacct 21030472  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  21030471 ttttttgagcttgtttgtcgatgagtgtgattgtttt 21030435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1851617 - 1851852
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1851617 tgttgaaaatgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 1851716  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  1851717 ctacctctaaaatatgttctcgacaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgtcgttatcaagcgacacttatacct 1851816  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||||||||    
T  1851817 tttttgagcttgtttgtcgatgagtgtgattgtttt 1851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38935024 - 38934779
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||    
T  38935024 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaaatggcttctctacatcaaaaattaacttatcac 38934925  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||| | ||| | |||||||||||||||||||||||||||||||||    
T  38934924 ctacctctaacacatgttctcgacaaaatttgaaccattggccgcctaagtattttttgtgacttgctctctttgccgttatcaagcgacacttatacct 38934825  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  38934824 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 38934779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 2195727 - 2195491
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  2195727 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 2195628  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||| | | ||||||||||||||||||  ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  2195627 ctacctataacatatgttcttggcaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 2195528  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  2195527 tttttgagcttgtttgtcgatgagtgtgattgttttc 2195491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 33610797 - 33611033
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  33610797 tgttgaaagtgcggattatgaacaccaaatctttatttggaaacgacttcaacgtgcatatttttatgtggcttctctagatcaaaaattaacttatcac 33610896  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  33610897 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 33610996  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||| |||||||||||    
T  33610997 tttttgagcttgtttgtcgatgagtatgattgttttc 33611033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 35539581 - 35539818
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35539581 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 35539680  T
Q  101 ctacctctaacatctgttctcgacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||| |||||||||      ||||||||| |||||||||    
T  35539681 ctacctctaacatctgttctcggaaaatttgaaccattggccgcctaagta-tttttataactggctctctttgc------caagcgacatttatacctt 35539773  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  35539774 ttttgagtttgtttgtcgatgagtgtgattgttttccgtgttcct 35539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 3150261 - 3150497
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3150261 tgttgaaagtgcagatcatgaacaccaaatctttatttgaaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 3150360  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||||| | ||||||||| ||||||| | ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  3150361 ctacctttaacatatgttctcggcaaaatttgaatcattggctgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 3150460  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  3150461 tttttgagcttgtttgtcgatgagtgtgattgttttc 3150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 30689875 - 30689628
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaa--ttaacttatc 98  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||    
T  30689875 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaaaattaacttatc 30689776  T
Q  99 acctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatac 197  Q
    |||||||||||||||  ||||||| |||| ||||||||||||| || ||||||||||||| ||||| | ||||| |||||||||||||||||||||||||    
T  30689775 acctacctctaacatacgttctcggcaaaatttgaaccattggtcgcctaagtattttttgtaacttgctctctctgccgttatcaagcgacacttatac 30689676  T
Q  198 cttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  30689675 cttttttgagcttgtttgtcgatgagtgtgattgttttctgtgttcct 30689628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 3029317 - 3029071
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  3029317 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacgtgaacgtgcatatttttaggtggcttctcttgataaaaaattaacttatcac 3029218  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||| |||||| ||||| | ||| ||||||||||||||||||||||||||||    
T  3029217 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtatttttttgtaacttgctctttttgccgttatcaagcgacacttatacc 3029118  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| |||| |||||||||||||||| ||| ||||    
T  3029117 ttttttgagcttgtttgtcgacgagtgtgattgttttccgtgttcct 3029071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27066434 - 27066199
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27066434 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 27066335  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  |||||||| |||||||||  ||||||||||||| ||||| | ||||||||| |||||||||||||| |||||||     
T  27066334 ctacctctaacatatgttctcagcaaaatttgatccattggccacctaagtattttttgtaacttgctctctttgctgttatcaagcgacatttatacc- 27066236  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| |||||||||||||||||||||    
T  27066235 tttttgagcttgtttgtcgatgagtgtgattgttttc 27066199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 33706431 - 33706666
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  33706431 tgttgaaattgcgaatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcac 33706530  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||| ||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  33706531 ctacctctaacatatgttctcggcaaaagttgaatcattgaccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 33706630  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||| ||||    
T  33706631 tttttgagtttgtttgtcgatgagtgtgattttttt 33706666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26320734 - 26320977
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  26320734 tgttgaaagtgcggatcatgaac--caaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 26320831  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||||||| | ||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  26320832 ctacctctaacacatgttctcgtcaaaatttgaaccattgtccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 26320931  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||| ||||||||| ||||| ||| ||||    
T  26320932 tttttgagcttgtttgtcgatcagtgtgattattttccgtgttcct 26320977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 10512022 - 10512266
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10512022 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgacttaaacgtgcatatttttaggtggcttctctaaatcaaaaattaacttatcac 10512121  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||| |||||| |||||||| | ||||||||||||||||||| ||||||||||||| | ||| | | |||||| ||||||||||||||||||||||||    
T  10512122 ctacctttaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgt-acttgctatctttgtcgttatcaagcgacacttatacct 10512220  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| |||||||||| |||||||||| ||| ||||    
T  10512221 tttttgagcttgtttgtcgatgagtgcgattgttttccgtgttcct 10512266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4882834 - 4882599
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  4882834 tgttgaaagtgtggatcatgaacatcaaatcgttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaatttatcac 4882735  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||| | ||||||||||  ||||| | |||||||| |||||||| |||||||||||||||    
T  4882734 ctacctctaacatatgttctcgacaaaacttgaaccattggccgccgaagtatttttagtaacttgctctctttgtcgttatcacgcgacacttatacct 4882635  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||||||||    
T  4882634 tttttgagtttgtttgtcgatgagtgtgattgtttt 4882599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 3396793 - 3397041
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3396793 tgttgaaagtgcggatcatgaacatcaaatctttatttggaaacgccttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcac 3396892  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta---ttttttataactggttctctttgccgttatcaagcgacacttata 196  Q
     |||||||||||| |||||||| | ||||||||| ||||||||| |||||||   |||||| ||||| | ||||||||||||||||||||||||||||||    
T  3396893 atacctctaacatatgttctcggcaaaatttgaatcattggccgcctaagtatttttttttgtaacttgctctctttgccgttatcaagcgacacttata 3396992  T
Q  197 ccttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||||| |||||| ||||||||||||| | ||||| ||| ||||    
T  3396993 ccttttttgagcttgtttgtcgatgagtgtgaattttttccgtgttcct 3397041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 20995554 - 20995788
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||    
T  20995554 tgttgaaagtgaagatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaaatagcttatcac 20995653  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     |||||||||||| |||||||| | ||||||||||||||||||| ||||||| ||||  ||||| | |||||||| ||||||||||||||||||||||||    
T  20995654 ttacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagta-ttttcgtaacttgctctctttgtcgttatcaagcgacacttatacct 20995752  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    |||||||| |||||| ||||||||||||||||||||    
T  20995753 tttttgagcttgtttgtcgatgagtgtgattgtttt 20995788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 17997130 - 17996897
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |     
T  17997130 tgttgaaagtgcgaatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctaaatcaaaaattaacttattaa 17997031  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtatttttt---ataactggttctctttgccgttatcaagcgacacttata 196  Q
    |  |||||||||| |||||| ||| ||||||||||||||||| | |||||||||||||   |||||| | ||||||||||||||||||| || |||||||    
T  17997030 cctcctctaacatatgttcttgacaaaatttgaaccattggcagcctaagtattttttgtaataacttgctctctttgccgttatcaagtgaaacttata 17996931  T
Q  197 ccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    ||||||||||| |||||| |||||||||||||||    
T  17996930 ccttttttgagcttgtttgtcgatgagtgtgatt 17996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 20350497 - 20350251
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagat-caaaaattaacttatca 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||    
T  20350497 tgttgaaagtgtggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctttagataaaaaaattaacttatca 20350398  T
Q  100 cctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| |||| ||| | ||||||||||| ||| ||| ||||||||||||| ||||| | || ||||| ||||||||||||||||| |||||    
T  20350397 cctacctctaacatatgttttcggcaaaatttgaaccgttgaccgcctaagtattttttgtaacttgatcgctttgtcgttatcaagcgacactcatacc 20350298  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| |   ||||||||||||||||| ||| ||||    
T  20350297 ttttttgagcttgtttgtgcttgagtgtgattgttttccgtgttcct 20350251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 20758507 - 20758273
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||| |||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  20758507 tgttgaaaatgcgaatcatgaacaccaaatctttacttggaaacgacttgaacatgcatatttttaggtggcttctctagatcaaaaattaacttatcac 20758408  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     ||||| | |||| ||||| |||| |||||||||| |||||| | ||||||||||||| |||   | ||||||||||||||||||| || ||||||||||    
T  20758407 atacctttgacatatgttcacgacaaaatttgaacaattggctgcctaagtattttttgtaatctgctctctttgccgttatcaagtgaaacttatacct 20758308  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| ||||||||| |||||||||    
T  20758307 tttttgagcttgtttgtcgatgagtatgattgttt 20758273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 41781403 - 41781169
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  41781403 tgttgaaagtgcggatcatgaacacaaagtctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctaggtcaaaaattagcttatcac 41781304  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||||||| |||||||||||| |||||| | |||||||||          ||||||||||||||    
T  41781303 ctacctctaacatatgttctcggcaaaagttgaaccattggccgcctaagtatttttcataacttgctctctttgc----------cgacacttatacct 41781214  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||| || |||||  ||||||||||||||||||||| ||| ||||    
T  41781213 ttttt-agcttgttagtcgatgagtgtgattgttttccgtgttcct 41781169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 19448554 - 19448320
Alignment:
Q  4 tgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcaccta 103  Q
    ||||||||| |||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19448554 tgaaagtgcagatcataaacaccaaatttttatttggaagcgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcaccta 19448455  T
Q  104 cctct-aacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttt 201  Q
    ||||| ||||| |||||| | | ||||||||| ||||||||| |||| |||||||| ||||| | || ||         ||||||||||||||||||| |    
T  19448454 cctctaaacatatgttcttggcaaaatttgaatcattggccgcctaaatattttttgtaacttgctccct---------tcaagcgacacttatacctat 19448364  T
Q  202 tttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| |||||| ||||||||||||||||||||| ||| ||||    
T  19448363 tttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 19448320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33930376 - 33930141
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||    
T  33930376 tgttgaacgtgcggatcatgaataccaaatctttatttgggaatgacttgaacgtgcatatttttaggcggcttctctaggtcaaaaattagcttatcac 33930277  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||||||||| || |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||          |||||||||||| |    
T  33930276 ctacctctaaaatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacat 33930187  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| |||||||| |||||||||||| ||| ||||    
T  33930186 tttttgagcttgtttgtcgatgagcgtgattgttttccgtgttcct 33930141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12420254 - 12420328
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttc 75  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  12420254 tgttgaaagtgtggatcatgaacaccgaatctttatttgggaacgatttaaacgtgcatatttttaggtggcttc 12420328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 26019 - 26264
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  26019 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 26118  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||| ||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  26119 ctacctctaacacatgttatcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 26218  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  26219 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 26264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 10524 - 10279
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10524 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 10425  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||  |||| ||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  10424 ctacctctaacacatgttatcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 10325  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  10324 tttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 11500457 - 11500214
Alignment:
Q  3 ttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacct 102  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  11500457 ttgaaaatgcggatcatgaacaccaaatctttatttggaaacgatttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcactt 11500358  T
Q  103 acctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttt 201  Q
    |||||||||||  ||||||| | |||||||||||||| |||| ||||||||||||| | ||| | |||||||||||||||||||||||||||||||||||    
T  11500357 acctctaacataagttctcggcaaaatttgaaccattagccgcctaagtattttttgttacttgctctctttgccgttatcaagcgacacttataccttt 11500258  T
Q  202 tttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| |||||| ||||||||||||||||||||| ||| ||||    
T  11500257 tttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 11500214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17478513 - 17478267
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17478513 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 17478414  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||| ||||||| |||||| ||||| | |||||||| ||||||||||||||||| |||||    
T  17478413 ctacctctaacatatgttctcggcaaaatttgaaccattgaccgcctaagtatttttttgtaacttgctctctttgtcgttatcaagcgacactcatacc 17478314  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  17478313 ttttttgagcttgtttgtggatgagtgtgattgttttccgtgttcct 17478267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 17574701 - 17574947
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17574701 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 17574800  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||| ||||||| |||||| ||||| | |||||||| ||||||||||||||||| |||||    
T  17574801 ctacctctaacatatgttctcggcaaaatttgaaccattgaccgcctaagtatttttttgtaacttgctctctttgtcgttatcaagcgacactcatacc 17574900  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  17574901 ttttttgagcttgtttgtggatgagtgtgattgttttccgtgttcct 17574947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5963297 - 5963060
Alignment:
Q  1 tgttgaaag-tgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatca 99  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5963297 tgttgaaaggtgcggatcatgaacactaaatctttatttggaaacaacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatca 5963198  T
Q  100 cctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||||||| ||||||||    
T  5963197 cctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagcgactcttatacc 5963098  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||| |||||| ||||||||||||||| |||||    
T  5963097 ttttttgagcttgtttgtcgatgagtgtgatttttttc 5963060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 33638337 - 33638573
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  33638337 tgttgaaagtgcggatcatgaacaccaaatttttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcac 33638436  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  33638437 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 33638536  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  33638537 tttttgagtttgtttgtcgatgagtgtgatttttttc 33638573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8925573 - 8925779
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  8925573 tgttgaaagtgtggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 8925672  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  8925673 ctacctctaacatatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacct 8925772  T
Q  200 tttttga 206  Q
    |||||||    
T  8925773 tttttga 8925779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 17482948 - 17482702
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  17482948 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgacttgaacgtgcatatttttaggtagcttctctagataaaaaattaacttatcac 17482849  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||| ||||||| |||||| ||||| | |||||||| ||||||||||||||||| |||||    
T  17482848 ctacctctaacatatgttctcggcaaaatttgaaccattgaccgcctaagtatttttttgtaacttgctctctttgtcgttatcaagcgacactcatacc 17482749  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  17482748 ttttttgagcttgtttgtggatgagtgtgattgttttccgtgttcct 17482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 17570266 - 17570512
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  17570266 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgacttgaacgtgcatatttttaggtagcttctctagataaaaaattaacttatcac 17570365  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagta-ttttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| |||||||| | ||||||||||||||| ||| ||||||| |||||| ||||| | |||||||| ||||||||||||||||| |||||    
T  17570366 ctacctctaacatatgttctcggcaaaatttgaaccattgaccgcctaagtatttttttgtaacttgctctctttgtcgttatcaagcgacactcatacc 17570465  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| | ||||||||||||||||||| ||| ||||    
T  17570466 ttttttgagcttgtttgtggatgagtgtgattgttttccgtgttcct 17570512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 23766102 - 23766347
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  23766102 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcac 23766201  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    |||| |||||||  |||||||| | ||||||||||||||||||  ||||||||||||| ||||| | |||||||||||||||||||||||| |||||| |    
T  23766202 ctacatctaacacatgttctcgtcaaaatttgaaccattggccacctaagtattttttgtaacttgctctctttgccgttatcaagcgacaattatacat 23766301  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| |||||  ||||||||||||||| ||||| ||| ||||    
T  23766302 tttttgagcttgttagtcgatgagtgtgattattttccgtgttcct 23766347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 14309454 - 14309208
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaa-ttaacttatca 99  Q
    ||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||| ||| || ||||| |||||||||||    
T  14309454 tgttgaaagtgcggatcatgaacactaaatctttatttggaaaggaattgaacgtgcatatttttaggtggcttctctacataaaaaaattaacttatca 14309355  T
Q  100 cctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    |||||||||||||| |||||||| |||| |||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  14309354 cctacctctaacatatgttctcggcaaaatttgaaccattgactgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacc 14309255  T
Q  199 ttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  14309254 ttttttgagcttgtttgtcgatgagtgtgattgttttccgtgttcct 14309208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 17470331 - 17470097
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  17470331 tgttgaaagtgcgaatcatgaagaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcat 17470232  T
Q  101 ctacctctaacatctgttctcga-caaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    | ||||||||||| ||||| |||  ||||||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| || ||||||||||    
T  17470231 ccacctctaacatatgttcacgataaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagtgaaacttatacct 17470132  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  17470131 tttttgagcttgtttgtcgatgagtgtgattgttt 17470097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 17582883 - 17583117
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  17582883 tgttgaaagtgcgaatcatgaagaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaacttatcat 17582982  T
Q  101 ctacctctaacatctgttctcga-caaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    | ||||||||||| ||||| |||  ||||||||||||||||||| ||||||||||||| ||||| | |||||||| |||||||||| || ||||||||||    
T  17582983 ccacctctaacatatgttcacgataaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcgttatcaagtgaaacttatacct 17583082  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttt 234  Q
    |||||||| |||||| |||||||||||||||||||    
T  17583083 tttttgagcttgtttgtcgatgagtgtgattgttt 17583117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 42688154 - 42687907
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtg--gcttccctagatcaaaaattaacttatc 98  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||  ||||| |||||| |||||||||||||||    
T  42688154 tgttgaaagtgcggatcatgaacaccaaatctttatttgtaaacgacttgaacgtgcttatttttaggtgtggcttctctagattaaaaattaacttatc 42688055  T
Q  99 acctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatac 197  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||| | |||||||| | ||||||||||||||| ||||    
T  42688054 acctacctctaacatatgttctcgacaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgtcattatcaagcgacactcatac 42687955  T
Q  198 cttttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||| ||| || ||| ||||||||||||||||||||| ||| ||||    
T  42687954 ctttttagagcttatttgtcgatgagtgtgattgttttccgtgttcct 42687907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33031460 - 33031215
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || |||||||||||||||||    
T  33031460 tgttgaaagtgcagatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttatctaaataaaaaattaacttatcac 33031361  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||||||||| ||||| ||| |||||| |||||| ||||| | |||||||| |||||||||||||||||||||| |    
T  33031360 ctacctctaacatatgttctcggcaaaatttgaatcattgaccgcctaagttttttttgtaacttgctctctttgtcgttatcaagcgacacttatactt 33031261  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||||  ||||| ||| ||||||||||||||||| ||| ||||    
T  33031260 tttttgagcatgtttgtcgttgagtgtgattgttttccgtgttcct 33031215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 19521748 - 19521506
Alignment:
Q  2 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  19521748 gttgaaagtgcggatcatgaacaccaaatttttatttggaaacgacttgaacgtgcatatttttaggtggcttatctagatcaaaaattaacttatca-c 19521650  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||| |||||||| | |||||||||||| |||||| ||||||||||||| ||||| | |||||||||  ||||||| |||||||||||||||    
T  19521649 tacctctaacatatgttctcggcaaaatttgaacca-tggccgcctaagtattttttgtaacttgctctctttgcgattatcaaacgacacttatacctt 19521551  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||| ||||||||||||| ||| ||||    
T  19521550 ttttgagcttgtttgtcgatgaatgtgattgttttccgtgttcct 19521506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 42918463 - 42918226
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  42918463 tgttgaaagtgcacatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattagcttttcac 42918364  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtatttttt-ataactggttctctttgccgttatcaagcgacacttatacc 198  Q
    ||||||||||||| ||||||| |  ||| ||||||||||| ||| ||||||||||||| |||||| | || |||||||||||||||||||| ||||||||    
T  42918363 ctacctctaacatatgttctcagcaaaagttgaaccattgaccgcctaagtattttttcataacttgctccctttgccgttatcaagcgacccttatacc 42918264  T
Q  199 -ttttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
     ||||||||| |||||| ||||||||| ||||||||||    
T  42918263 tttttttgagcttgtttgtcgatgagtatgattgtttt 42918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 27734712 - 27734939
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| | ||||||    
T  27734712 tgttgaaagtgcggatcatgaataccaaatctttatttgggaacgatttgaacatgcatatttttaggtggcttctctagatcaaaaattagc-tatcac 27734810  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||| ||| ||| ||||||||||||  ||||| | ||||||||||||||||||| |||||||||||||    
T  27734811 ctacctctaacatatgttctcggcaaaagttgaaccgttgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagtgacacttatacct 27734910  T
Q  200 tttttgaggttgtttatcgatgagtgtga 228  Q
    |||||||| |||||| |||||||||||||    
T  27734911 tttttgagtttgtttgtcgatgagtgtga 27734939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 47175062 - 47174827
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||||||||  |||||||    
T  47175062 tgttgaaagtgcagatcatgaacaccaaatctttatttgggaacgatttgat-gtgcataattttaggtggcttctctagatcaaaaattagtttatcac 47174964  T
Q  101 ctacctctaacatctgttctcgacaaat-ttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||  ||||  ||||||||||||||| ||||||||||||  ||||| | |||||||| ||||||||||||||||||||||||    
T  47174963 ctacctctaacatatgttctctgcaaaagttgaaccattggccgcctaagtatttttcttaacttgctctctttgtcgttatcaagcgacacttatacct 47174864  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||| |||| |||||| |||||||||||||||||||||    
T  47174863 tttctgagcttgtttctcgatgagtgtgattgttttc 47174827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 23299386 - 23299615
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  23299386 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaatgacttgaacatgcatatttttaggtggcttctctagatc-aaaattagcttatcac 23299484  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| | ||||||||||  |||||   |||||||||||||||||||||||||||||||||    
T  23299485 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgccaaagtatttttcgtaactttctctctttgccgttatcaagcgacacttatacct 23299584  T
Q  200 tttttgaggttgtttatcgatgagtgtgatt 230  Q
    |||||||| |||| | | |||||||||||||    
T  23299585 tttttgagtttgtatgttgatgagtgtgatt 23299615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 42827020 - 42827255
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||||||||||| |||| | |||||||| ||||||||    
T  42827020 tgttgaaagtgcggatcatgaacaccaagtctttatttgagaatgatttgaacgtgcatatttttaggtggcttctctaggtaaaaaattagcttatcac 42827119  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||| ||| | ||| || |||| ||||||| ||||||||||||  ||||| |||||||||||          ||||||||||||||    
T  42827120 ctacctctaacatatgttatcggcaaaagttaaaccgttggccgcctaagtatttttcgtaacttgttctctttgc----------cgacacttatacct 42827209  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||||||| ||||||||||| |||||||||||||||| ||| ||||    
T  42827210 tttttgagcttgtttatcgacgagtgtgattgttttccgtgttcct 42827255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9149924 - 9149815
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  9149924 tgttgaaagtgcagatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattagcttatcac 9149825  T
Q  101 ctacctctaa 110  Q
    ||||||||||    
T  9149824 ctacctctaa 9149815  T

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Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41262042 - 41262180
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||| ||||||| |||| ||||||||||||| | |||||||||||| ||||||||||||||||||||     ||| |||||||||||||||||    
T  41262042 tgttgaaagtgtggatcataaacatcaaatctttatttagaaacgacttgaacatgcatatttttaggtggctt-----gataaaaaattaacttatcac 41262136  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccg 143  Q
    ||||||||||||| ||| || | | |||||||||||||||||||    
T  41262137 ctacctctaacatatgtactaggcaaaatttgaaccattggccg 41262180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 9149819 - 9149733
Alignment:
Q  144 tctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgatt 230  Q
    |||||||||||||  ||||| | |||||||  |||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  9149819 tctaagtatttttcgtaacttgctctctttatcgttatcaagcgacacttataccttttttgagtttgtttgtcgatgagtgtgatt 9149733  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 41262184 - 41262242
Alignment:
Q  178 ttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  41262184 ttatcaagagacacttataccttttttgcgcttgtttgtcgatgagtgtgattgttttc 41262242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 1003 - 769
Alignment:
Q  12 cggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacctacctctaac 111  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||    
T  1003 cggatcatgaacaccaaatctttatttggaaacgacttgaacgtgcatatttttaggtggcttctctagataaaaaattaacttatcgcctacttctaac 904  T
Q  112 atctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttataccttttttgaggtt 210  Q
    || |||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||||||||| ||    
T  903 atatgttctcggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaagcgacacttatacattttttgagctt 804  T
Q  211 gtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    |||| ||||||||||||||||||||| ||| ||||    
T  803 gtttgtcgatgagtgtgattgttttccgtgttcct 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12588 - 12824
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||||| ||||||||    
T  12588 tgttgaaagtgcgggtcatgaacaccaaatctttatttgagaacgacttgaacgtgcatatttttaggtggcttctctatattaaaaattagcttatcac 12687  T
Q  101 ctacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| |||||||| | ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||||||||||||||    
T  12688 ctacctctaacatatgttctcggcaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgacacttatacct 12787  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  12788 tttttgagtttgtttgtcgatgagtgtgatttttttc 12824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 692 - 926
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||    
T  692 tgttgaaagtgcggatcatgaacaccaaatctttatttggaaacgacttgaacgt-catatttttaagtggctactctagatcaaaaattaacttatcac 790  T
Q  101 ctacctctaacatctgttctcgacaaa-tttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
     |||||||||||| |||||| | |||| |||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||    
T  791 ttacctctaacatatgttcttggcaaaatttgaaccattggccgcctaagtattttttgtaacttgctctctttgccgttatcaaacgacacttatacct 890  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgtttt 235  Q
    ||||| || |||||| ||||||||||||||||||||    
T  891 ttttttagcttgtttgtcgatgagtgtgattgtttt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 543 - 307
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  543 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaaagacttgaacgtacatatttttaggtggcttctctagataaaaaattagcttatcac 444  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| ||||||||||| ||| ||||||||||||  ||||| | |||||||||||||||||||||| || |||||||    
T  443 ctacctctaacatatgttctcggtaaaagttgaaccattgaccgcctaagtatttttcgtaacttgctctctttgccgttatcaagcgagacctatacct 344  T
Q  200 tttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    |||||||| |||||| ||||||||||||||| |||||    
T  343 tttttgagtttgtttgtcgatgagtgtgattattttc 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 101305 - 101071
Alignment:
Q  2 gttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcacc 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  101305 gttgaaagtgcggatcatgaacaccaaatctttatttgggaatgacttgaacatgcatatttttaggtggcttctctaggtcaaaaattagcttatcacc 101206  T
Q  102 tacctctaacatctgttctcgac-aaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacctt 200  Q
    |||||||||||| |||||||| | ||| ||||||||||||||| ||||||||||||  ||||| | |||||||||          |||||||||||||||    
T  101205 tacctctaacatatgttctcggcaaaagttgaaccattggccgcctaagtatttttcgtaacttgctctctttgc----------cgacacttatacctt 101116  T
Q  201 ttttgaggttgtttatcgatgagtgtgattgttttctgtgctcct 245  Q
    ||||||| |||||| ||||||||||||||||||||| ||| ||||    
T  101115 ttttgagtttgtttgtcgatgagtgtgattgttttccgtgttcct 101071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 4624 - 4850
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  4624 tgttgaaagtgcggatcatgaacaccaaatctttatttggtaacgacttgaacgtgcgtatttttaggtggcttctctagatcaaaaattagcttatcac 4723  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| || |||||||| ||  |||| |||||||  ||||| | ||||||||||||||| |||||||||||||||||    
T  4724 ctacctctaacatatgttctcgggaaaagtttaaccattgaccacctaattatttttcgtaacttgctctctttgccgttatgaagcgacacttatacct 4823  T
Q  200 tttttgaggttgtttatcgatgagtgtg 227  Q
    |||||||| ||| || ||||||||||||    
T  4824 tttttgagtttg-ttgtcgatgagtgtg 4850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 11073 - 11299
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaacttatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  11073 tgttgaaagtgcggatcatgaacaccaaatctttatttggtaacgacttgaacgtgcgtatttttaggtggcttctctagatcaaaaattagcttatcac 11172  T
Q  101 ctacctctaacatctgttctc-gacaaatttgaaccattggccgtctaagtattttttataactggttctctttgccgttatcaagcgacacttatacct 199  Q
    ||||||||||||| ||||||| |  ||| || |||||||| ||  |||| |||||||  ||||| | ||||||||||||||| |||||||||||||||||    
T  11173 ctacctctaacatatgttctcgggaaaagtttaaccattgaccacctaattatttttcgtaacttgctctctttgccgttatgaagcgacacttatacct 11272  T
Q  200 tttttgaggttgtttatcgatgagtgtg 227  Q
    |||||||| ||| || ||||||||||||    
T  11273 tttttgagtttg-ttgtcgatgagtgtg 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14997 - 15088
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttgggaacgacttgaacgtgcatatttttaggtggcttccctagatcaaaaattaa 92  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14997 tgttgaaagtgcggatcatgaacaccaaatctttatttgaaaacgacttgaacgtgcatatttttaggtggcttctctagatcaaaaattaa 15088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 10434 - 10503
Alignment:
Q  167 tctctttgccgttatcaagcgacacttataccttttttgaggttgtttatcgatgagtgtgattgttttc 236  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  10434 tctctttgccgttatcaagcgacacttataccttttttgagtttgtttgtcgatgagtgtgatttttttc 10503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10394 - 10432
Alignment:
Q  1 tgttgaaagtgcggatcatgaacaccaaatctttatttg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10394 tgttgaaagtgcggatcatgaacaccaaatctttatttg 10432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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