View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1643_low_52 (Length: 368)
Name: NF1643_low_52
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1643_low_52 |
 | |
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| [»] chr1 (4 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 35)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 10495099 - 10494741
Alignment:
| Q |
1 |
ctcttgctctctcaccctcatatacgttaaaagagacaccacaattatctccagctgtataaaatattttagtcatcttgacagggatggaagtgttcct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10495099 |
ctcttgctctctcaccctcatatacgttaaaagagacaccacaattatctccagctgtataaaatattttagtcatcttgacagggatggaagtgttcct |
10495000 |
T |
|
| Q |
101 |
aggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagcct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494999 |
aggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagcct |
10494900 |
T |
|
| Q |
201 |
tcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaata |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || | || ||||||| ||| ||||| ||| |||||| |
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|
| T |
10494899 |
tcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaata |
10494800 |
T |
|
| Q |
301 |
gatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatca |
359 |
Q |
| |
|
|||| ||||||||||||||||| || || |||||||||||||||| ||||||||||||| |
|
|
| T |
10494799 |
gatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatca |
10494741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 8653887 - 8654251
Alignment:
| Q |
1 |
ctcttgctctctcaccctcatatacgttaaaagagacaccacaattatctccagctgtataaaatattttagtcatcttgacagggatggaagtgttcct |
100 |
Q |
| |
|
|||||| ||||||||||||||| || ||| |||| |||||||||||||| ||||||| || || |||||| | ||||||||||||||||||||||| |
|
|
| T |
8653887 |
ctcttggtctctcaccctcataaacaataatagaggcaccacaattatctatagctgtacaatatcctttagtatttttgacagggatggaagtgttcct |
8653986 |
T |
|
| Q |
101 |
aggaatcaccacatccatgatatcttc---atttgttactt---caataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattctta |
194 |
Q |
| |
|
||||||||||||||||||||||| ||| || |||| || | |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
8653987 |
aggaatcaccacatccatgatattttcccaatatgttgctgttgcgataccaagtgacaatggggtaacatcacgtagcaccaagttggggacattctta |
8654086 |
T |
|
| Q |
195 |
aagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtctt |
294 |
Q |
| |
|
||| |||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||| || | ||||| |||||| ||| ||||| ||| |
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|
| T |
8654087 |
aagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgatattcataaacaaagccttccccttgaaaaactcta |
8654186 |
T |
|
| Q |
295 |
gcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatca |
359 |
Q |
| |
|
|||||||||| ||||||||||||||||| || || |||||||| || |||||||||||||||||| |
|
|
| T |
8654187 |
gcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatcaatatca |
8654251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 13334093 - 13333833
Alignment:
| Q |
1 |
ctcttgctctctcaccctcatatacgttaaaagagacaccacaattatctccagctgtataaaatatt---ttagtcatcttgacagggatggaagtgtt |
97 |
Q |
| |
|
||||||||||||||||||||||||| | || |||||||| |||||||||| ||||||||||| || | |||||| |||||||||||||||||||||| |
|
|
| T |
13334093 |
ctcttgctctctcaccctcatatacatcaatagagacacaacaattatcttcagctgtataatatcctcctttagtcttcttgacagggatggaagtgtt |
13333994 |
T |
|
| Q |
98 |
cctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaag |
197 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||| | ||| |||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13333993 |
cctaggaatcacaacattcatgatatgttcatat---actgaaataccaagtgataatgggataacatctcgtagcaccaagttcgggacagtcttaaag |
13333897 |
T |
|
| Q |
198 |
ccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
261 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333896 |
ccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
13333833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 76 - 359
Target Start/End: Original strand, 8666937 - 8667220
Alignment:
| Q |
76 |
tcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcac |
175 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||| |||||||| |||| | |||| ||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
8666937 |
tcttgacaggtatggaagtgtttctaggaatcaccacactcatgatatgttcaatacttacagaaataccaagtgacaaaggggtcacatctcgtagcac |
8667036 |
T |
|
| Q |
176 |
caagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcc |
275 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || | || ||| |
|
|
| T |
8667037 |
caagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgatacccatgaataattcc |
8667136 |
T |
|
| Q |
276 |
ttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatca |
359 |
Q |
| |
|
|||| ||| ||| | ||| ||||| | || ||||||||||||||||| || || ||||| ||||| |||||||||||||||||| |
|
|
| T |
8667137 |
ttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcatcaatatca |
8667220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 8658946 - 8659167
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| || |||| |||||| |||| ||||||||||||||||| |
|
|
| T |
8658946 |
ataccaagtgacaatggggtaacatcttgcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaa |
8659045 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
8659046 |
cagcctcatctgggttgatactcttgtataaaaccttctttgggaaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaag |
8659145 |
T |
|
| Q |
341 |
aacaacatcatcaatatcactc |
362 |
Q |
| |
|
||||| ||| |||||||||||| |
|
|
| T |
8659146 |
aacaatatcgtcaatatcactc |
8659167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 1301044 - 1301264
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||| ||||||||||| || |||| || ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
1301044 |
ataccaagtgacaatggggtaacatcttgcagcaccaagtttgggacattcttgaatcctttgcttaaaatagcagcttgaatagctgcaccataagcaa |
1301143 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
||||||| || ||||||||||||||| | ||| | ||| | |||| ||||||||||| ||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
1301144 |
cagcctcgtc-gggttgatactcttgtataaaactttctccgggaaaatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaag |
1301242 |
T |
|
| Q |
341 |
aacaacatcatcaatatcactc |
362 |
Q |
| |
|
||||| |||||| ||||||||| |
|
|
| T |
1301243 |
aacaatatcatcgatatcactc |
1301264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 8545216 - 8545427
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| ||| |||||||||||| | ||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
8545216 |
ataccaagtgacaaaggggtaacatctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaa |
8545315 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||| ||||| || |||||||| || ||||||| ||||||||| || || ||||| | | |||||| |||||||| || ||||| || ||||| |
|
|
| T |
8545316 |
cagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgccaacaag |
8545415 |
T |
|
| Q |
341 |
aacaacatcatc |
352 |
Q |
| |
|
||||||||||| |
|
|
| T |
8545416 |
gacaacatcatc |
8545427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 352
Target Start/End: Original strand, 8590173 - 8590432
Alignment:
| Q |
90 |
gaagtgttcctaggaatcaccacatccatgatatcttcatttgtt-acttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggaca |
188 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||| |||| | || || | |||||| |||||||| ||||||||| |||||||||| || || ||| |
|
|
| T |
8590173 |
gaagtgttcttaggaatcactacatccatgatatcatcatatattgacgt----accaagagacaatggagtaacatcttgtagcaccaaattaggaaca |
8590268 |
T |
|
| Q |
189 |
ttcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaa |
288 |
Q |
| |
|
||||||| || |||| | | |||||| ||||||||||||||||||||||||||||||||||| ||||| || ||| | | |||||||| | |||||| |
|
|
| T |
8590269 |
ttcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaa |
8590368 |
T |
|
| Q |
289 |
agtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
||||||||||||| | ||||||||||||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8590369 |
agtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatc |
8590432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 351
Target Start/End: Original strand, 6789048 - 6789305
Alignment:
| Q |
91 |
aagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacatt |
190 |
Q |
| |
|
||||||||||||||||||||||| ||||| || | | | ||||| | ||||||| ||||| || ||||||||| | ||||||||||| || ||| | |
|
|
| T |
6789048 |
aagtgttcctaggaatcaccacactcatgacatttcc---tattactgccttaccaagagacaacggtgtaacatcttgcagcaccaagtttggaacact |
6789144 |
T |
|
| Q |
191 |
cttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaag |
290 |
Q |
| |
|
|||| ||||||| ||||| | ||||||||| ||||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| | | | |||| |
|
|
| T |
6789145 |
cttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaact |
6789244 |
T |
|
| Q |
291 |
tcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
||||||||||| | ||||||||||||||| || || || ||||| ||||| |||||||||| |
|
|
| T |
6789245 |
tcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcat |
6789305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 319
Target Start/End: Complemental strand, 29582492 - 29582248
Alignment:
| Q |
72 |
gtcatcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgta |
171 |
Q |
| |
|
||||||||| |||| |||| |||||||||||||||||||||| |||||||||| | |||||| | |||||||||||||| || |||| |||| | | |
|
|
| T |
29582492 |
gtcatcttggcaggaatgggagtgttcctaggaatcaccacactcatgatatctccttttgttgat---ataccaagtgacaagggtgtaatatcttgca |
29582396 |
T |
|
| Q |
172 |
gcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaa |
271 |
Q |
| |
|
| || | || ||||||| || ||||||| ||| | ||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||| |
|
|
| T |
29582395 |
agataaaatctggaacattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaa |
29582296 |
T |
|
| Q |
272 |
atccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaat |
319 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||| | |||||||||||||| |
|
|
| T |
29582295 |
atccttccccttgaaaaattcttgcaatagctgatgcactttgggaat |
29582248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 352
Target Start/End: Complemental strand, 7878315 - 7878107
Alignment:
| Q |
144 |
ccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacag |
243 |
Q |
| |
|
||||| |||||||| ||||||||| | | |||||| || || |||||||||| || |||| | | |||||||||||||||||||||||||||||||| |
|
|
| T |
7878315 |
ccaagagacaatggagtaacatcttgcaacaccaaattaggaacattcttaataccatcacaaagcagagcagcctgaacagctgcaccataagcaacag |
7878216 |
T |
|
| Q |
244 |
cctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaac |
343 |
Q |
| |
|
| ||||| |||||||| || |||| | |||||||| |||||||||||| |||||||| | ||||||||| ||||||| ||||| ||||| ||||| || |
|
|
| T |
7878215 |
cttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtac |
7878116 |
T |
|
| Q |
344 |
aacatcatc |
352 |
Q |
| |
|
||||||||| |
|
|
| T |
7878115 |
aacatcatc |
7878107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 354
Target Start/End: Original strand, 17267429 - 17267735
Alignment:
| Q |
45 |
ttatctccagctgtataaaatattttagtcatcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaatac |
144 |
Q |
| |
|
|||||| |||||||| | || |||| || ||||||||||| || |||||||||||||||||||||||| ||||| ||| || | ||| ||||||| |
|
|
| T |
17267429 |
ttatctgcagctgtaatatatttttttgtaatcttgacaggaattgaagtgttcctaggaatcaccacactcatgacatc---atgtattaaatcaatac |
17267525 |
T |
|
| Q |
145 |
caagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagc |
244 |
Q |
| |
|
|||| || | ||| | ||||| | ||||||||| || |||||||| | || | |||| || | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
17267526 |
caagagatagtggtgcgacatcaatcaacaccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagc |
17267625 |
T |
|
| Q |
245 |
ctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaaca |
344 |
Q |
| |
|
|||||| ||||||||||| ||||| || ||||||| ||| || |||| |||||||| | |||||||| |||||||| || || ||||| ||||| ||| |
|
|
| T |
17267626 |
ctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggaca |
17267725 |
T |
|
| Q |
345 |
acatcatcaa |
354 |
Q |
| |
|
|||||||||| |
|
|
| T |
17267726 |
acatcatcaa |
17267735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 143 - 352
Target Start/End: Original strand, 8581285 - 8581494
Alignment:
| Q |
143 |
accaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaaca |
242 |
Q |
| |
|
||||||||||||||| ||||||||||| | | |||||| || ||| |||||| ||||||||| | | ||||||||||| ||| ||||||||||||||| |
|
|
| T |
8581285 |
accaagtgacaatggtgtaacatctcgcaaaatcaagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaaca |
8581384 |
T |
|
| Q |
243 |
gcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaa |
342 |
Q |
| |
|
|||||||| |||||||| |||||||| || ||||||| || ||||| || || ||||| | | |||||| |||||||| || |||||||| ||||| | |
|
|
| T |
8581385 |
gcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaagga |
8581484 |
T |
|
| Q |
343 |
caacatcatc |
352 |
Q |
| |
|
|||||||||| |
|
|
| T |
8581485 |
caacatcatc |
8581494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 8671745 - 8671608
Alignment:
| Q |
79 |
tgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaa |
178 |
Q |
| |
|
||||||| ||||||||||| || |||||||||||| |||||||| |||| | || | ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8671745 |
tgacaggtatggaagtgtttcttggaatcaccacactcatgatatgttcaatccttgcagcaataccaagtgacaatggcgtaacatctcgtagcaccaa |
8671646 |
T |
|
| Q |
179 |
gttcgggacattcttaaagccttcactcaaaatagcag |
216 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
8671645 |
gttggggacattcttaaagcctttgctcaaaatagcag |
8671608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 8609500 - 8609711
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||||||||| || || || | |||||||| ||| | ||||||||| ||||| ||||||||||||| |
|
|
| T |
8609500 |
ataccaagtgacaaaggtgtaacatctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaa |
8609599 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
| |||||||| |||||||| ||| | ||||||||||| | || ||||||||||||| ||| | | |||||| |||||||| || ||||| || ||||| |
|
|
| T |
8609600 |
ccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaag |
8609699 |
T |
|
| Q |
341 |
aacaacatcatc |
352 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8609700 |
aacaacatcatc |
8609711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 352
Target Start/End: Complemental strand, 27831428 - 27831249
Alignment:
| Q |
173 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaa |
272 |
Q |
| |
|
||||||||| || |||||| ||| | | |||||||| | ||||||||| |||||||||||| |||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
27831428 |
caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa |
27831329 |
T |
|
| Q |
273 |
tccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
||||| | ||| |||||||| |||||| | ||||||||||||||||| || || ||||| ||||| ||||||||||| |
|
|
| T |
27831328 |
tcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatc |
27831249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 150 - 352
Target Start/End: Original strand, 8575918 - 8576120
Alignment:
| Q |
150 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
249 |
Q |
| |
|
||||| || ||||||||||||| ||||||||| || ||||||||| |||||||||||| | |||||| || ||| | |||||||||||||||||||||| |
|
|
| T |
8575918 |
gacaacggtgtaacatctcgtaacaccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcat |
8576017 |
T |
|
| Q |
250 |
ctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatc |
349 |
Q |
| |
|
| |||||||| ||||| || || ||||||| ||| |||| || || ||||| | | |||||| |||||||| || |||||||| ||||| |||||||| |
|
|
| T |
8576018 |
cagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggacaacatc |
8576117 |
T |
|
| Q |
350 |
atc |
352 |
Q |
| |
|
||| |
|
|
| T |
8576118 |
atc |
8576120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 141 - 345
Target Start/End: Complemental strand, 29578257 - 29578053
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||| ||||| || |||| |||||| | ||||| || || |||||||||| ||| ||| |||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
29578257 |
ataccaagcgacaagggtgtaatatctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaa |
29578158 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
||||||| || ||||| || ||| ||||||||||| | | ||| ||||||||||||||||| | ||||||||||||| || |||||||| || ||||| |
|
|
| T |
29578157 |
cagcctcgtcagggtttatgctcatgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcactttgggaattctagatgaacctccaacaag |
29578058 |
T |
|
| Q |
341 |
aacaa |
345 |
Q |
| |
|
|||| |
|
|
| T |
29578057 |
gacaa |
29578053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 173 - 355
Target Start/End: Original strand, 17259856 - 17260038
Alignment:
| Q |
173 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaa |
272 |
Q |
| |
|
||||||||| || |||||||| | || | |||| || | ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| || |
|
|
| T |
17259856 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat |
17259955 |
T |
|
| Q |
273 |
tccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaat |
355 |
Q |
| |
|
||||| | ||| || || || |||||||| | |||||||| |||||||| || || ||||| ||||| |||||||||||||| |
|
|
| T |
17259956 |
tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatcaat |
17260038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 135 - 351
Target Start/End: Original strand, 3146841 - 3147057
Alignment:
| Q |
135 |
acttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccat |
234 |
Q |
| |
|
||||| |||||||| ||||| || | ||||||| | | ||||||||| || ||||| |||||| |||||||||| | |||||| || ||||||||||||| |
|
|
| T |
3146841 |
acttcgataccaagagacaaaggagcaacatcttgcaccaccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccat |
3146940 |
T |
|
| Q |
235 |
aagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacc |
334 |
Q |
| |
|
||||||| |||||||| |||||||| || || |||| || ||||| |||||| || |||||||| | ||||||||| ||||| || || || ||||| |
|
|
| T |
3146941 |
aagcaacggcctcatcagggttgatgctgttacacagatgcttccctgcaaaaaattcctgcaatagttgttgcacttttggaattctagacgagccacc |
3147040 |
T |
|
| Q |
335 |
cacaagaacaacatcat |
351 |
Q |
| |
|
||||| || ||||||| |
|
|
| T |
3147041 |
gacaaggacgacatcat |
3147057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 352
Target Start/End: Original strand, 8537638 - 8537830
Alignment:
| Q |
160 |
taacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
259 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||| |||| | ||||| | ||||||||| ||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
8537638 |
taacatctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgat |
8537737 |
T |
|
| Q |
260 |
actcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|| || | | |||||||| | | ||||||| ||||| ||| ||||||||||||||||| || || ||||| || || ||||||||||| |
|
|
| T |
8537738 |
gcttttaaaaatatccttccccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatc |
8537830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 352
Target Start/End: Original strand, 8616261 - 8616475
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcact---caaaatagcagcctgaacagctgcaccataag |
237 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||| || | | ||| | |||||||||||| ||||| ||| || |
|
|
| T |
8616261 |
ataccaagtgacagaggggtaacatctcgcagcgccaagtttggaacattcttaaagtctgtagtacccaacaaagcagcctgaactgctgccccactag |
8616360 |
T |
|
| Q |
238 |
caacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccac |
337 |
Q |
| |
|
||||||||||||| || ||||| |||||||||||||||||| | |||||||| |||||| || |||||||| |||||||| || || ||||| || |
|
|
| T |
8616361 |
caacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccgac |
8616460 |
T |
|
| Q |
338 |
aagaacaacatcatc |
352 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
8616461 |
aagaacaatatcatc |
8616475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 351
Target Start/End: Original strand, 8102311 - 8102460
Alignment:
| Q |
202 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
301 |
Q |
| |
|
||||||| |||||||| |||||||| |||||||||||||||||||| || |||||||| || ||||| | ||||| | || || ||||||||||| || |
|
|
| T |
8102311 |
cactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacag |
8102410 |
T |
|
| Q |
302 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
| || |||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
8102411 |
ttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 352
Target Start/End: Original strand, 8569896 - 8570105
Alignment:
| Q |
143 |
accaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaaca |
242 |
Q |
| |
|
||||||||||||||| ||||||||||| | |||||||| || ||| |||||| || |||||| | | ||||||||| ||||||||| ||||||||| |
|
|
| T |
8569896 |
accaagtgacaatggtgtaacatctcgcaaaaccaagtttggaacactcttaacgctttcactatgcaaaacagcctgaatagctgcaccgtaagcaaca |
8569995 |
T |
|
| Q |
243 |
gcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaa |
342 |
Q |
| |
|
|||||||| ||||| || || ||||| || ||||||| || ||||| ||||| ||||| | |||||| |||||||| || |||||||| ||||| | |
|
|
| T |
8569996 |
gcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccaccaacaagga |
8570095 |
T |
|
| Q |
343 |
caacatcatc |
352 |
Q |
| |
|
|||||||||| |
|
|
| T |
8570096 |
caacatcatc |
8570105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 352
Target Start/End: Complemental strand, 8383390 - 8383250
Alignment:
| Q |
212 |
agcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
311 |
Q |
| |
|
|||||| | ||| ||||||||||||||||||||||| || || || || ||| || | ||||||| || ||||||| ||||||||| ||||||||| |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
312 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatc |
8383250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 351
Target Start/End: Complemental strand, 8017937 - 8017788
Alignment:
| Q |
202 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
301 |
Q |
| |
|
|||||||||| || || || ||||| |||||||||||||||||||| |||||||||||||||||||| | || || | || || || |||||||| || |
|
|
| T |
8017937 |
cactcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacag |
8017838 |
T |
|
| Q |
302 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
| || ||||||||||| || | |||||| || |||||||||||||||| |
|
|
| T |
8017837 |
ttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcat |
8017788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 8558918 - 8559065
Alignment:
| Q |
90 |
gaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacat |
189 |
Q |
| |
|
||||| |||||||||||||||||| ||| |||||| | || |||||||||||||| ||||| ||||||||||||| ||||||| ||| || |||| |
|
|
| T |
8558918 |
gaagtattcctaggaatcaccacactcataatatctccg---gtcacttcaataccaagggacaaaggggtaacatctctcagcaccatgtttggaacat |
8559014 |
T |
|
| Q |
190 |
tcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||| | ||||||| | | | ||||||| ||||||||||||||||||| |
|
|
| T |
8559015 |
tcttagtgtcttcactaagcaaaacagcctggacagctgcaccataagcaa |
8559065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 345
Target Start/End: Complemental strand, 8586291 - 8586087
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||| || || ||||||||| ||| || || | || ||||||||| || || ||| ||||| |
|
|
| T |
8586291 |
ataccaagtgacagaggggtaacatctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaa |
8586192 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||| || ||||| ||||||| ||||| |||| || || ||||| |||||| || || ||||||||||| || || || ||||| ||||| |
|
|
| T |
8586191 |
cagcctcatcaggattgatgttcttgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccaccgacaag |
8586092 |
T |
|
| Q |
341 |
aacaa |
345 |
Q |
| |
|
|||| |
|
|
| T |
8586091 |
gacaa |
8586087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 357
Target Start/End: Complemental strand, 8636856 - 8636712
Alignment:
| Q |
213 |
gcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactt |
312 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||||| | |||||| ||||| |||| |||||| |||||||| ||| || ||||| | ||||| | |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
313 |
tgggaatcctcgatgaaccacccacaagaacaacatcatcaatat |
357 |
Q |
| |
|
| |||||||| || || ||||| ||||| ||||||||||| |||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcatctatat |
8636712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 8646469 - 8646597
Alignment:
| Q |
150 |
gacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcat |
249 |
Q |
| |
|
||||||||||| |||||| | | ||||||||| || ||||||||||||| |||| || | |||||||||||| ||||| ||||||||||| ||| ||| |
|
|
| T |
8646469 |
gacaatggggtgacatcttgaaacaccaagtttggagcattcttaaagccatcacataataaagcagcctgaacggctgcgccataagcaacggccacat |
8646568 |
T |
|
| Q |
250 |
ctgggttgatactcttgcacaaatccttc |
278 |
Q |
| |
|
| |||||||| |||| ||| || |||||| |
|
|
| T |
8646569 |
cagggttgatgctctcgcataattccttc |
8646597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 27846655 - 27846555
Alignment:
| Q |
177 |
aagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcct |
276 |
Q |
| |
|
||||| || |||||||||| | | |||||||| | ||||||||| |||||||| ||| |||||||||||||||| |||||||| |||||| ||| ||||| |
|
|
| T |
27846655 |
aagtttggaacattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttgtacatatcct |
27846556 |
T |
|
| Q |
277 |
t |
277 |
Q |
| |
|
| |
|
|
| T |
27846555 |
t |
27846555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 39985290 - 39985356
Alignment:
| Q |
202 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgca |
268 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| |||||||||||||| || || || |||||||| |
|
|
| T |
39985290 |
cactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgca |
39985356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 17259726 - 17259794
Alignment:
| Q |
45 |
ttatctccagctgtataaaatattttagtcatcttgacagggatggaagtgttcctaggaatcaccaca |
113 |
Q |
| |
|
|||||| |||||||| | || |||| || ||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
17259726 |
ttatctgcagctgtaatatatttttttgtaatcttgacaggaattgaagtgttcctaggaatcaccaca |
17259794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 8569825 - 8569869
Alignment:
| Q |
69 |
ttagtcatcttgacagggatggaagtgttcctaggaatcaccaca |
113 |
Q |
| |
|
|||||| | |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
8569825 |
ttagtccttttgacaggaatggaagtgttccttggaatcaccaca |
8569869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 8601628 - 8601768
Alignment:
| Q |
212 |
agcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
311 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| |||||||| || ||||| ||| ||| | ||||||| || ||||| |||| || || | ||||||| |
|
|
| T |
8601628 |
agcagcttgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcact |
8601727 |
T |
|
| Q |
312 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
||||||||||| || ||||| || ||||| ||| ||||||| |
|
|
| T |
8601728 |
ttgggaatcctagaagaaccgccaacaaggacagcatcatc |
8601768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 141 - 368
Target Start/End: Complemental strand, 4679142 - 4678915
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |||||||||||||| || | ||||||||||||||||| |
|
|
| T |
4679142 |
ataccaagtgacaatggggtaacatctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaa |
4679043 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679042 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaag |
4678943 |
T |
|
| Q |
341 |
aacaacatcatcaatatcactcccgcgc |
368 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
4678942 |
aacaacatcatcaatattactcccgcgc |
4678915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 15594619 - 15594815
Alignment:
| Q |
143 |
accaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaaca |
242 |
Q |
| |
|
|||||| ||||| || | ||||||| ||| ||||||||| || ||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
15594619 |
accaagagacaaaggtgcaacatcttgtatcaccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaaca |
15594718 |
T |
|
| Q |
243 |
gcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaa |
339 |
Q |
| |
|
|||||||| |||||||| ||| ||||||| ||||| | || ||||| || | |||||| | |||||||||||||||||| || || ||||| |||| |
|
|
| T |
15594719 |
gcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaa |
15594815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 147 - 351
Target Start/End: Complemental strand, 34467367 - 34467163
Alignment:
| Q |
147 |
agtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcct |
246 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||| |||||| | |||||| || |||||||| ||||||| ||||||| |
|
|
| T |
34467367 |
agtgacaatggtgtaacatctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcct |
34467268 |
T |
|
| Q |
247 |
catctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaac |
346 |
Q |
| |
|
|||| |||||||| || ||||| | |||||| | || |||||||| ||||||| | ||||||||||||||||| || || || || ||||| ||| | |
|
|
| T |
34467267 |
catcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagc |
34467168 |
T |
|
| Q |
347 |
atcat |
351 |
Q |
| |
|
||||| |
|
|
| T |
34467167 |
atcat |
34467163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 277
Target Start/End: Complemental strand, 52549537 - 52549395
Alignment:
| Q |
135 |
acttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccat |
234 |
Q |
| |
|
|||||||| |||| ||||| || |||||||| | |||||||| || || ||||||| || |||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
52549537 |
acttcaatgacaagagacaaaggtgtaacatcctgcagcaccaactttggaacattctgaatgccttcactcaacaatgcagcctgaacagctgcgccat |
52549438 |
T |
|
| Q |
235 |
aagcaacagcctcatctgggttgatactcttgcacaaatcctt |
277 |
Q |
| |
|
|||| ||| ||||||| || || || | ||||||||| ||||| |
|
|
| T |
52549437 |
aagctacaacctcatcaggattaatgcccttgcacaactcctt |
52549395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 362
Target Start/End: Complemental strand, 9336541 - 9336255
Alignment:
| Q |
76 |
tcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcac |
175 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||| |||||||| ||| || | | | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9336541 |
tcttgacaggtatggaagtgtttctaggaatcaccacactcatgatattttccttatatgttgcgataccaagtgacaatggggtaacatctcgtagcac |
9336442 |
T |
|
| Q |
176 |
caagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcc |
275 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || | || ||| |
|
|
| T |
9336441 |
caagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattcc |
9336342 |
T |
|
| Q |
276 |
ttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactc |
362 |
Q |
| |
|
|||| ||| ||||| ||| ||||||| ||||||||||| |||||||| || || |||||||||||||||| ||||||||||| |||| |
|
|
| T |
9336341 |
ttccccttgaaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcatcaatattactc |
9336255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 30774695 - 30775046
Alignment:
| Q |
1 |
ctcttgctctctcaccctcatatacgttaaaagagacaccacaat---tatctccagctgtataaaatattttagtcatcttgacagggatggaagtgtt |
97 |
Q |
| |
|
|||||||||||||||||||||| || |||| |||||||| |||| |||| | ||| ||| | || ||| |||||||| ||||| | ||||| || |
|
|
| T |
30774695 |
ctcttgctctctcaccctcataaacattaatagagacacggcaatggttatcgctagcagtaccatatccttttgtcatcttcacaggtagagaagtatt |
30774794 |
T |
|
| Q |
98 |
cctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaag |
197 |
Q |
| |
|
||||||||| |||||||||||| | |||| ||| ||| ||||||||||||||| ||||| |||||||| |||||||| || ||| ||||||||| | |
|
|
| T |
30774795 |
cctaggaattaccacatccatggtgtcttgattc---actgaaataccaagtgacaaaggggtgacatctcgcagcaccaactttggggcattcttaatg |
30774891 |
T |
|
| Q |
198 |
ccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
297 |
Q |
| |
|
||||||||||| | ||||||||| |||||||| || | |||||| |||||||| || ||||| ||||||||||||||||||| || || || | ||| |
|
|
| T |
30774892 |
ccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgca |
30774991 |
T |
|
| Q |
298 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|||| || ||||||||||||||||| || |||||||| |||||||||| |||||| |
|
|
| T |
30774992 |
atagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatc |
30775046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 352
Target Start/End: Original strand, 35131977 - 35132250
Alignment:
| Q |
76 |
tcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcac |
175 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||||| |||||||||| | | || | ||||||| ||||| || |||||||| ||| ||| |
|
|
| T |
35131977 |
tcttgacaggaatgcaagtgttcctaggaatcaccacattcatgatatctcc---tactattgacctaccaagagacaaaggtgtaacatcctgtaacac |
35132073 |
T |
|
| Q |
176 |
caagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcc |
275 |
Q |
| |
|
||| || || ||||| || | ||||| |||||| | |||||||||||| ||||| |||||||| ||||||||||| ||||| || ||||||||||| ||| |
|
|
| T |
35132074 |
caactttggaacattttttatgcctttactcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactcc |
35132173 |
T |
|
| Q |
276 |
ttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|||| || ||||||| ||||||||| | ||||||||||||||||| || || || || ||||||||||||||||| |
|
|
| T |
35132174 |
ttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaacaacatcatc |
35132250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 23597107 - 23596957
Alignment:
| Q |
204 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
303 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || | |
|
|
| T |
23597107 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
23597008 |
T |
|
| Q |
304 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaa |
354 |
Q |
| |
|
||| || ||||||||||| | || || || ||||||||||||||||||| |
|
|
| T |
23597007 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaa |
23596957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 351
Target Start/End: Original strand, 54396069 - 54396216
Alignment:
| Q |
204 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
303 |
Q |
| |
|
|||||||| || || |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| | || |||| || || || || ||||| || | |
|
|
| T |
54396069 |
ctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagct |
54396168 |
T |
|
| Q |
304 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
||| ||||| |||||||| | ||| ||||| ||||||||||| |||| |
|
|
| T |
54396169 |
gttgaacttttggaatccttgttgatccaccaacaagaacaacttcat |
54396216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 351
Target Start/End: Complemental strand, 23588257 - 23588108
Alignment:
| Q |
202 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
301 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| |||||||| ||||| |||||||| ||||| || | ||||| | || || || |||||||| || |
|
|
| T |
23588257 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
23588158 |
T |
|
| Q |
302 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
| ||| || ||||||||||| | || ||||| |||||||||||||||| |
|
|
| T |
23588157 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacatcat |
23588108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 140; Significance: 3e-73; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 141 - 360
Target Start/End: Complemental strand, 16658102 - 16657883
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||| ||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
16658102 |
ataccaagcgacaatggggtaacatctctcaacaccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaa |
16658003 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||| ||||| ||||||||||| ||||| |||||||| | ||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
16658002 |
cagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaag |
16657903 |
T |
|
| Q |
341 |
aacaacatcatcaatatcac |
360 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
16657902 |
aacaacgtcatcaatatcac |
16657883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 351
Target Start/End: Complemental strand, 16662577 - 16662367
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||| || |||| ||||| |||||||||||| | |||||| || |||||||| |||||||||| |
|
|
| T |
16662577 |
ataccaagtgacaatggggtaacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaa |
16662478 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| ||||||| || || |||| |||||| || |||||||| |||||||| || || || || ||||| |
|
|
| T |
16662477 |
cagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaag |
16662378 |
T |
|
| Q |
341 |
aacaacatcat |
351 |
Q |
| |
|
||||| ||||| |
|
|
| T |
16662377 |
aacaatatcat |
16662367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 43624995 - 43625110
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||| || || |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43624995 |
ataccaagtgacaaaggggtaacatctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaa |
43625094 |
T |
|
| Q |
241 |
cagcctcatctgggtt |
256 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
43625095 |
cagcctcatcagggtt |
43625110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 78 - 352
Target Start/End: Original strand, 14702931 - 14703202
Alignment:
| Q |
78 |
ttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcacca |
177 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||||||| || | | | ||| |||| || ||||| || |||| ||| | ||||||| |
|
|
| T |
14702931 |
ttgacaggaatgcaagtgttcctaggaatcaccacatccatgatacctccgaat---aattccctacctagagacaaaggtgtaatatcctgaagcacca |
14703027 |
T |
|
| Q |
178 |
agttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcctt |
277 |
Q |
| |
|
| ||||| |||||||| | | |||||||||| | |||||||||||||||||| |||||||| ||||| ||||| ||||| || || |||||||| ||||| |
|
|
| T |
14703028 |
acttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcacaactcctt |
14703127 |
T |
|
| Q |
278 |
ccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|| || |||||||| || |||| | || ||||||||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
14703128 |
cccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatc |
14703202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 91 - 352
Target Start/End: Original strand, 11998945 - 11999201
Alignment:
| Q |
91 |
aagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacatt |
190 |
Q |
| |
|
||||||||||||||||||||||| ||||||| | | | ||||||| ||||||| ||||| || |||||||| | | |||||| || || ||||| |
|
|
| T |
11998945 |
aagtgttcctaggaatcaccacactcatgataccacc---tcttacttcc-taccaagagacaaaggagtaacatcctgcaacaccaaatttggaacatt |
11999040 |
T |
|
| Q |
191 |
cttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaag |
290 |
Q |
| |
|
||||| |||||||||| | |||||| ||||||||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||| || |||||| |
|
|
| T |
11999041 |
cttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaag |
11999140 |
T |
|
| Q |
291 |
tcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|| || ||||| | ||| |||||||| ||||| || || ||||| ||||| ||||||||||| |
|
|
| T |
11999141 |
tcatgtaatagctgttggactttggg-atcctagaagatccaccaacaagtacaacatcatc |
11999201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 352
Target Start/End: Original strand, 7541749 - 7542020
Alignment:
| Q |
78 |
ttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcacca |
177 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||||||| |||||| | | | ||| | | ||||| ||||| || |||||||| | ||||||| |
|
|
| T |
7541749 |
ttgacaggaatgcaagtgttccgaggaatcaccacatccattatatctcc---tatcactcccctgccaagagacaaaggtgtaacatcctgcagcacca |
7541845 |
T |
|
| Q |
178 |
agttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcctt |
277 |
Q |
| |
|
| || || | ||||||| |||| ||||||| | ||||||||||||||||| |||||||||||||||||||| || || || ||||||||||| ||||| |
|
|
| T |
7541846 |
actttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctt |
7541945 |
T |
|
| Q |
278 |
ccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
| || |||||||| | ||||| | || ||| ||||||||||||| || || || ||||| ||||||||||| |
|
|
| T |
7541946 |
tccattgaaaaagtcctttaatagctgatgtactatgggaatcctcgaagacccgccgacaaggacaacatcatc |
7542020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 352
Target Start/End: Complemental strand, 12245959 - 12245780
Alignment:
| Q |
173 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaa |
272 |
Q |
| |
|
|||||| || || |||||||||| ||| |||||| | |||||| ||||||||||| ||||||||||||||||| || ||||| || ||||||||||| |
|
|
| T |
12245959 |
caccaaatttggaacattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaat |
12245860 |
T |
|
| Q |
273 |
tccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
||||||| || |||||||| || ||||| | ||| |||||||||||||| || || ||||| ||||| |||| |||||| |
|
|
| T |
12245859 |
tccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatc |
12245780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 352
Target Start/End: Complemental strand, 12259228 - 12258955
Alignment:
| Q |
76 |
tcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaa---taccaagtgacaatggggtaacatctcgtag |
172 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||| | |||| | ||||||| ||||| || |||||||| | || |
|
|
| T |
12259228 |
tcttgacaggaatgcaagtgttcctaggaatcaccacatccatgatatctcc------tactaaagacctaccaagagacaaaggtgtaacatcctgcag |
12259135 |
T |
|
| Q |
173 |
caccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaa |
272 |
Q |
| |
|
| |||| || || ||||||| | ||||||| || | ||||||||||| ||| || ||| |||| ||||||||||| || || || ||||||||||| |
|
|
| T |
12259134 |
ctccaactttggaacattctggatatcttcacttaacaaagcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgcacaac |
12259035 |
T |
|
| Q |
273 |
tccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|| |||| ||| ||||| || || ||||| | ||||||||| ||||||| || || ||||| ||||| ||||||||||| |
|
|
| T |
12259034 |
tctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaaggacaacatcatc |
12258955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 12234349 - 12234453
Alignment:
| Q |
217 |
cctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttggg |
316 |
Q |
| |
|
||||||||||||| |||||||||| ||||| || ||||| ||||||||||||| ||||||| ||| ||||| || |||||||| | ||||||||||| |
|
|
| T |
12234349 |
cctgaacagctgcctcataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttggg |
12234447 |
T |
|
| Q |
317 |
aatcct |
322 |
Q |
| |
|
|||||| |
|
|
| T |
12234448 |
aatcct |
12234453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 349
Target Start/End: Original strand, 28219501 - 28219709
Alignment:
| Q |
141 |
ataccaagtgacaatggggtaacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaa |
240 |
Q |
| |
|
|||||||| ||||| || ||||||||| | |||||||| ||||| || || ||||||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
28219501 |
ataccaagagacaaaggtgtaacatcttgcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaa |
28219600 |
T |
|
| Q |
241 |
cagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaag |
340 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||| ||||||| |||||| || |||| ||| | ||| ||||| ||||| || || || || || ||||| |
|
|
| T |
28219601 |
cagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagcctccaacaag |
28219700 |
T |
|
| Q |
341 |
aacaacatc |
349 |
Q |
| |
|
||||||||| |
|
|
| T |
28219701 |
aacaacatc |
28219709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 352
Target Start/End: Original strand, 12528025 - 12528298
Alignment:
| Q |
76 |
tcttgacagggatggaagtgttcctaggaatcaccacatccatgatatcttcatttgttacttcaataccaagtgacaatggggtaacatctcgtagcac |
175 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||| | |||| | ||| | || |||||| ||||| || |||||||| | ||| |
|
|
| T |
12528025 |
tcttgacagggatgcaagtgttcctaggaatcataacatccataagatctccttttataga---aaaaccaagagacaaaggtataacatcttgcagcgt |
12528121 |
T |
|
| Q |
176 |
caagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcc |
275 |
Q |
| |
|
|| ||||| ||| |||| | |||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| | || ||| |
|
|
| T |
12528122 |
cactttcggaacagtcttcatgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactcc |
12528221 |
T |
|
| Q |
276 |
ttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
352 |
Q |
| |
|
|| | ||| ||||| || |||||||| | | ||||||||||||||| || || ||||| ||||| |||| |||||| |
|
|
| T |
12528222 |
ttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatc |
12528298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 351
Target Start/End: Original strand, 43744419 - 43744609
Alignment:
| Q |
161 |
aacatctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgata |
260 |
Q |
| |
|
||||||| | ||||||| ||| || || || ||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||| ||||| || |
|
|
| T |
43744419 |
aacatcttgcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatg |
43744518 |
T |
|
| Q |
261 |
ctcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
351 |
Q |
| |
|
|||| ||||||||||||| |||||| || |||||||| | ||| ||||| |||||||| || || ||||| |||||||||||||||| |
|
|
| T |
43744519 |
ttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcat |
43744609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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