View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1643_low_62 (Length: 348)

Name: NF1643_low_62
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1643_low_62
NF1643_low_62
[»] chr1 (42 HSPs)
chr1 (10-248)||(45294485-45294726)
chr1 (183-309)||(32007074-32007203)
chr1 (183-309)||(41808202-41808331)
chr1 (183-308)||(5055788-5055916)
chr1 (180-308)||(48660019-48660150)
chr1 (182-309)||(45813010-45813140)
chr1 (183-309)||(28455874-28456003)
chr1 (183-309)||(29994382-29994511)
chr1 (180-309)||(41761410-41761542)
chr1 (236-309)||(41039302-41039375)
chr1 (213-309)||(39276383-39276479)
chr1 (183-309)||(192415-192544)
chr1 (183-308)||(20748-20876)
chr1 (213-308)||(5943714-5943809)
chr1 (213-308)||(49783740-49783835)
chr1 (231-308)||(35110099-35110176)
chr1 (225-309)||(26032846-26032930)
chr1 (185-307)||(21938944-21939069)
chr1 (234-307)||(35945851-35945924)
chr1 (212-308)||(7059499-7059595)
chr1 (233-305)||(7275734-7275806)
chr1 (183-305)||(2088908-2089033)
chr1 (213-308)||(13109803-13109898)
chr1 (234-304)||(50106200-50106270)
chr1 (183-309)||(11688263-11688392)
chr1 (236-308)||(46447373-46447449)
chr1 (182-309)||(4065960-4066090)
chr1 (241-308)||(778635-778702)
chr1 (186-272)||(29587255-29587344)
chr1 (212-270)||(35224372-35224430)
chr1 (215-308)||(13097339-13097432)
chr1 (258-307)||(32982351-32982400)
chr1 (215-308)||(38817199-38817292)
chr1 (228-308)||(3716410-3716490)
chr1 (226-307)||(26264537-26264618)
chr1 (213-305)||(13183179-13183271)
chr1 (254-309)||(9886891-9886946)
chr1 (252-287)||(16770177-16770212)
chr1 (253-308)||(34305652-34305707)
chr1 (258-308)||(25931157-25931207)
chr1 (239-305)||(39284349-39284415)
chr1 (213-282)||(3716644-3716713)
[»] chr6 (30 HSPs)
chr6 (181-309)||(33621492-33621623)
chr6 (183-309)||(33704216-33704345)
chr6 (213-309)||(4464160-4464256)
chr6 (183-308)||(28322932-28323060)
chr6 (183-308)||(21000692-21000820)
chr6 (182-308)||(361010-361139)
chr6 (182-309)||(2959148-2959278)
chr6 (213-308)||(19145504-19145598)
chr6 (183-309)||(21037291-21037419)
chr6 (183-307)||(12252023-12252150)
chr6 (248-309)||(35218639-35218700)
chr6 (183-278)||(11572008-11572106)
chr6 (224-308)||(29009650-29009734)
chr6 (183-308)||(24619079-24619207)
chr6 (213-308)||(22576214-22576309)
chr6 (213-301)||(7613336-7613425)
chr6 (212-308)||(16518455-16518549)
chr6 (227-308)||(4610833-4610906)
chr6 (255-301)||(9454732-9454778)
chr6 (257-300)||(10999416-10999459)
chr6 (254-308)||(28592128-28592182)
chr6 (197-309)||(584783-584897)
chr6 (234-279)||(17590391-17590436)
chr6 (243-308)||(32289408-32289473)
chr6 (238-305)||(7014313-7014380)
chr6 (255-309)||(26567522-26567576)
chr6 (251-308)||(11456044-11456101)
chr6 (266-307)||(31963714-31963755)
chr6 (269-309)||(7487267-7487307)
chr6 (252-308)||(32353941-32353997)
[»] chr3 (41 HSPs)
chr3 (181-309)||(7824453-7824584)
chr3 (181-309)||(29689481-29689612)
chr3 (183-309)||(54151680-54151809)
chr3 (183-309)||(54158266-54158395)
chr3 (183-309)||(42392804-42392933)
chr3 (183-309)||(43247649-43247778)
chr3 (183-309)||(51665924-51666053)
chr3 (183-308)||(4601425-4601553)
chr3 (181-302)||(55018040-55018164)
chr3 (213-309)||(36228993-36229089)
chr3 (213-309)||(3112994-3113090)
chr3 (213-305)||(9349679-9349771)
chr3 (183-309)||(52500838-52500967)
chr3 (213-309)||(28844537-28844634)
chr3 (230-307)||(40756728-40756805)
chr3 (183-306)||(1778851-1778977)
chr3 (181-308)||(33334606-33334736)
chr3 (213-308)||(475281-475375)
chr3 (183-309)||(41377584-41377708)
chr3 (213-307)||(38257304-38257398)
chr3 (238-305)||(7958627-7958694)
chr3 (213-308)||(32001424-32001519)
chr3 (214-308)||(47635005-47635099)
chr3 (183-307)||(35461480-35461607)
chr3 (253-308)||(55320400-55320455)
chr3 (242-308)||(43775285-43775351)
chr3 (213-309)||(29750654-29750749)
chr3 (212-299)||(448884-448971)
chr3 (213-308)||(27230700-27230794)
chr3 (212-308)||(8137633-8137727)
chr3 (213-308)||(2590810-2590896)
chr3 (255-305)||(53182808-53182858)
chr3 (238-303)||(8151406-8151471)
chr3 (267-308)||(47770410-47770451)
chr3 (265-308)||(26511903-26511946)
chr3 (254-308)||(50729598-50729652)
chr3 (254-308)||(50783197-50783251)
chr3 (264-305)||(35716997-35717038)
chr3 (239-308)||(51054760-51054829)
chr3 (257-309)||(31305743-31305795)
chr3 (240-288)||(43023695-43023743)
[»] chr7 (52 HSPs)
chr7 (182-309)||(25546274-25546404)
chr7 (180-309)||(23358182-23358314)
chr7 (181-308)||(31770532-31770662)
chr7 (183-309)||(4106738-4106867)
chr7 (180-309)||(25112246-25112378)
chr7 (182-305)||(44083939-44084065)
chr7 (213-309)||(47570717-47570813)
chr7 (213-308)||(4107342-4107437)
chr7 (183-309)||(40058238-40058367)
chr7 (184-309)||(47250250-47250378)
chr7 (231-308)||(47557832-47557909)
chr7 (180-309)||(2146633-2146765)
chr7 (213-309)||(38781207-38781303)
chr7 (213-301)||(27229484-27229573)
chr7 (213-309)||(5587313-5587409)
chr7 (213-309)||(5592274-5592370)
chr7 (213-309)||(5772818-5772914)
chr7 (181-308)||(8439076-8439206)
chr7 (213-308)||(11355856-11355951)
chr7 (213-308)||(39513983-39514078)
chr7 (213-307)||(43753754-43753849)
chr7 (234-309)||(48146807-48146882)
chr7 (213-308)||(29484755-29484850)
chr7 (183-303)||(18506281-18506403)
chr7 (213-308)||(4001844-4001937)
chr7 (213-309)||(41183848-41183944)
chr7 (183-308)||(7162790-7162916)
chr7 (182-308)||(10220473-10220601)
chr7 (213-308)||(35309887-35309982)
chr7 (231-308)||(31288224-31288301)
chr7 (180-308)||(32606330-32606461)
chr7 (225-309)||(38033774-38033858)
chr7 (212-308)||(46427392-46427487)
chr7 (181-308)||(48444152-48444282)
chr7 (183-305)||(15634882-15635007)
chr7 (213-308)||(28603044-28603139)
chr7 (234-309)||(43203360-43203435)
chr7 (181-291)||(47960972-47961085)
chr7 (248-298)||(34763510-34763560)
chr7 (258-309)||(19630667-19630718)
chr7 (216-293)||(13887207-13887282)
chr7 (198-308)||(35577876-35577989)
chr7 (184-308)||(42081619-42081743)
chr7 (257-309)||(27915579-27915631)
chr7 (238-309)||(5462949-5463020)
chr7 (213-308)||(43170939-43171034)
chr7 (254-308)||(40657603-40657657)
chr7 (241-309)||(25872824-25872892)
chr7 (277-309)||(47960857-47960889)
chr7 (213-303)||(17753007-17753100)
chr7 (269-305)||(23036208-23036244)
chr7 (257-301)||(25049965-25050009)
[»] chr2 (43 HSPs)
chr2 (182-309)||(10639605-10639735)
chr2 (183-308)||(33083554-33083682)
chr2 (183-308)||(19048754-19048882)
chr2 (183-308)||(39831444-39831571)
chr2 (182-309)||(11459714-11459844)
chr2 (183-309)||(26605624-26605753)
chr2 (213-309)||(37197609-37197705)
chr2 (182-308)||(29659218-29659347)
chr2 (182-308)||(39535534-39535663)
chr2 (183-308)||(23839859-23839987)
chr2 (180-309)||(34460366-34460498)
chr2 (182-305)||(11708677-11708803)
chr2 (182-309)||(19537306-19537436)
chr2 (182-309)||(11816549-11816680)
chr2 (181-309)||(19816218-19816349)
chr2 (182-309)||(45125164-45125294)
chr2 (183-309)||(27137917-27138045)
chr2 (224-309)||(4851364-4851449)
chr2 (225-306)||(15782635-15782715)
chr2 (213-305)||(43684102-43684194)
chr2 (237-308)||(7275886-7275957)
chr2 (248-308)||(42578236-42578296)
chr2 (241-306)||(20497592-20497657)
chr2 (240-308)||(33001762-33001830)
chr2 (213-308)||(38440197-38440292)
chr2 (234-308)||(43778468-43778542)
chr2 (243-308)||(44181887-44181952)
chr2 (213-305)||(4800909-4801001)
chr2 (213-305)||(16654396-16654488)
chr2 (242-308)||(42025732-42025799)
chr2 (215-305)||(7349133-7349223)
chr2 (213-305)||(40786212-40786304)
chr2 (213-280)||(38400502-38400569)
chr2 (226-305)||(40825161-40825240)
chr2 (238-287)||(12366786-12366835)
chr2 (267-308)||(13106452-13106493)
chr2 (212-308)||(21312237-21312331)
chr2 (237-277)||(29726072-29726112)
chr2 (246-309)||(34234596-34234657)
chr2 (242-305)||(45201880-45201938)
chr2 (243-308)||(6055004-6055070)
chr2 (212-250)||(8311361-8311399)
chr2 (238-288)||(15072151-15072200)
[»] scaffold1348 (1 HSPs)
scaffold1348 (183-309)||(861-990)
[»] chr8 (42 HSPs)
chr8 (183-309)||(6602517-6602646)
chr8 (183-309)||(6677970-6678099)
chr8 (182-309)||(4530981-4531111)
chr8 (183-309)||(35779496-35779625)
chr8 (182-309)||(32333113-32333243)
chr8 (182-309)||(42192638-42192768)
chr8 (183-308)||(70523-70651)
chr8 (181-309)||(1339-1470)
chr8 (181-309)||(28817254-28817385)
chr8 (213-309)||(1078647-1078743)
chr8 (213-309)||(42885207-42885303)
chr8 (181-308)||(39303307-39303438)
chr8 (183-307)||(40911221-40911347)
chr8 (213-301)||(5385371-5385459)
chr8 (183-309)||(7792661-7792790)
chr8 (183-305)||(7813322-7813447)
chr8 (213-308)||(31969720-31969815)
chr8 (183-308)||(39435282-39435410)
chr8 (180-308)||(6099569-6099700)
chr8 (213-305)||(31532128-31532220)
chr8 (234-308)||(13891144-13891218)
chr8 (234-308)||(45264640-45264714)
chr8 (180-308)||(31695269-31695400)
chr8 (182-308)||(29425356-29425479)
chr8 (234-308)||(33731464-33731538)
chr8 (183-307)||(9292018-9292145)
chr8 (183-309)||(10963241-10963368)
chr8 (183-308)||(12534720-12534846)
chr8 (234-308)||(3822450-3822524)
chr8 (246-308)||(14400781-14400843)
chr8 (181-278)||(18386706-18386806)
chr8 (240-308)||(9775042-9775110)
chr8 (213-307)||(41849233-41849326)
chr8 (258-308)||(42364702-42364752)
chr8 (240-307)||(18752401-18752468)
chr8 (212-307)||(7403696-7403790)
chr8 (257-307)||(20269607-20269657)
chr8 (257-307)||(21056236-21056286)
chr8 (225-308)||(2907060-2907142)
chr8 (257-305)||(40932786-40932834)
chr8 (183-284)||(41753004-41753108)
chr8 (234-308)||(44124080-44124154)
[»] chr4 (57 HSPs)
chr4 (183-309)||(34739280-34739409)
chr4 (182-308)||(1173950-1174079)
chr4 (183-308)||(43139906-43140034)
chr4 (181-308)||(53457822-53457952)
chr4 (182-309)||(11277981-11278107)
chr4 (183-309)||(19849502-19849631)
chr4 (183-309)||(26424857-26424985)
chr4 (183-309)||(45874055-45874184)
chr4 (180-308)||(28798388-28798519)
chr4 (182-308)||(18257328-18257457)
chr4 (183-309)||(54768431-54768560)
chr4 (182-309)||(238457-238587)
chr4 (185-308)||(19225261-19225387)
chr4 (191-309)||(23417482-23417603)
chr4 (212-307)||(55214684-55214779)
chr4 (182-309)||(12735430-12735560)
chr4 (213-308)||(22608018-22608113)
chr4 (213-299)||(39807877-39807963)
chr4 (213-308)||(29581044-29581138)
chr4 (213-309)||(12867874-12867970)
chr4 (240-308)||(33770628-33770696)
chr4 (213-304)||(23710337-23710428)
chr4 (225-308)||(31015027-31015110)
chr4 (183-273)||(32441119-32441212)
chr4 (213-308)||(55400261-55400356)
chr4 (182-307)||(12767086-12767214)
chr4 (181-308)||(19673929-19674059)
chr4 (183-298)||(37134048-37134166)
chr4 (241-308)||(1966611-1966678)
chr4 (213-308)||(2075538-2075633)
chr4 (183-305)||(2864751-2864876)
chr4 (181-304)||(19814103-19814229)
chr4 (240-308)||(37620677-37620745)
chr4 (213-308)||(24417878-24417973)
chr4 (254-309)||(19119204-19119258)
chr4 (213-284)||(22910281-22910352)
chr4 (213-284)||(22968170-22968241)
chr4 (250-305)||(23532117-23532172)
chr4 (258-308)||(44369916-44369965)
chr4 (234-308)||(50033436-50033510)
chr4 (250-308)||(50347329-50347387)
chr4 (255-309)||(52171989-52172043)
chr4 (243-309)||(52768300-52768365)
chr4 (186-270)||(3465755-3465842)
chr4 (213-293)||(49030754-49030833)
chr4 (257-307)||(48822890-48822940)
chr4 (255-308)||(51287676-51287730)
chr4 (255-308)||(16555382-16555435)
chr4 (213-308)||(24517983-24518078)
chr4 (257-307)||(1125964-1126014)
chr4 (234-307)||(2804576-2804647)
chr4 (234-308)||(50035946-50036020)
chr4 (246-307)||(516457-516518)
chr4 (226-270)||(2107268-2107312)
chr4 (212-295)||(32778157-32778238)
chr4 (255-287)||(37395699-37395731)
chr4 (258-298)||(41679452-41679492)
[»] scaffold0119 (2 HSPs)
scaffold0119 (183-309)||(13950-14079)
scaffold0119 (183-309)||(19630-19759)
[»] chr5 (31 HSPs)
chr5 (183-309)||(13203957-13204086)
chr5 (183-309)||(21018223-21018352)
chr5 (213-309)||(31909384-31909480)
chr5 (180-305)||(1191543-1191671)
chr5 (182-309)||(35317696-35317826)
chr5 (184-309)||(4824938-4825066)
chr5 (234-309)||(29265929-29266004)
chr5 (213-305)||(17984745-17984837)
chr5 (183-309)||(12257356-12257485)
chr5 (234-308)||(2971038-2971112)
chr5 (182-299)||(27721430-27721550)
chr5 (212-305)||(6021024-6021117)
chr5 (248-309)||(32143413-32143474)
chr5 (187-308)||(8734000-8734125)
chr5 (183-284)||(9576985-9577089)
chr5 (182-308)||(11124651-11124780)
chr5 (213-308)||(28591350-28591445)
chr5 (180-305)||(40177621-40177749)
chr5 (241-309)||(21112110-21112178)
chr5 (213-308)||(35545966-35546061)
chr5 (242-308)||(23262606-23262672)
chr5 (247-308)||(2786338-2786398)
chr5 (267-308)||(4925673-4925714)
chr5 (255-307)||(3386894-3386946)
chr5 (258-308)||(19181789-19181838)
chr5 (248-308)||(17465147-17465205)
chr5 (241-305)||(41580078-41580142)
chr5 (225-308)||(14270569-14270652)
chr5 (252-309)||(28423241-28423298)
chr5 (212-268)||(3049094-3049150)
chr5 (183-246)||(30127894-30127960)
[»] scaffold0038 (1 HSPs)
scaffold0038 (183-308)||(114252-114380)
[»] scaffold0044 (1 HSPs)
scaffold0044 (183-309)||(9972-10101)
[»] scaffold0032 (1 HSPs)
scaffold0032 (183-309)||(56481-56610)
[»] scaffold0053 (1 HSPs)
scaffold0053 (213-308)||(22196-22291)
[»] scaffold0352 (1 HSPs)
scaffold0352 (239-308)||(8943-9012)
[»] scaffold0067 (1 HSPs)
scaffold0067 (187-309)||(34822-34948)
[»] scaffold0360 (2 HSPs)
scaffold0360 (213-307)||(14528-14632)
scaffold0360 (239-287)||(14726-14776)
[»] scaffold0178 (1 HSPs)
scaffold0178 (229-301)||(15141-15213)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 45294485 - 45294726
Alignment:
Q  10 agaagaagaagtagctagatggaaggaagcttgtgaattggaagttaaagctggaaagaaagagattgaagagcgtgacaaaatggtaaagacttctttt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45294485 agaagaagaagtagctagatggaaggaagcttgtgaattggaagttaaagctggaaagaaagagattgaagagcgtgacaaaatggtaaagatttctttt 45294584  T
Q  110 atccttgccatatcaataaaaacaaaacttgttattttctacatgttaaagcatgttaaagaacatgtcctttgtctagaagtcctggctcaactagcaa 209  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||    
T  45294585 atccttgccatatcaataaaaacaaaactagttattttctacatgttaaagcatgttaaagaacctttcatttgtctagaagtcctagctcaactagcaa 45294684  T
Q  210 at---aaaattgcaagaccggacatcatgacccgggttcgaa 248  Q
    ||    ||||||||||||||||||||||||||||||||||||    
T  45294685 atgccgaaattgcaagaccggacatcatgacccgggttcgaa 45294726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 32007074 - 32007203
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  32007074 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 32007173  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  32007174 tttcagtggattaccacttcatctaagacc 32007203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 41808202 - 41808331
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 41808301  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  41808302 tttcagtggattaccacttcatctaagacc 41808331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 5055916 - 5055788
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||| || ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  5055916 gtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 5055817  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  5055816 tttcagtggattaccacttcatctaagac 5055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 48660019 - 48660150
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| |||||||| ||||||    |||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  48660019 tttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtt 48660118  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    || ||||||||| |||||||||||||||||||    
T  48660119 tattttcagtggattaccacttcatctaagac 48660150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 45813140 - 45813010
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| ||||||||  |||||    ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45813140 tgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 45813041  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  45813040 ttttcagtggattaccacttcatctaagacc 45813010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 28455874 - 28456003
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||     
T  28455874 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 28455973  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  28455974 tttcagtggattaccacttcatctaagacc 28456003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 29994511 - 29994382
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| || ||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  29994511 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagtttaa 29994412  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||    
T  29994411 tttcagtggtttaccacttcatctaagacc 29994382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 41761542 - 41761410
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| | |||||| ||||||    |||||||||| |||||| |  |||||||||||||||||| ||||||||||||||||||||||||    
T  41761542 tttgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtt 41761443  T
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    || ||||||||| ||||||||||||| ||||||    
T  41761442 tattttcagtggattaccacttcatccaagacc 41761410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 41039375 - 41039302
Alignment:
Q  236 acccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41039375 acccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 41039302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 39276383 - 39276479
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||||||    
T  39276383 aaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattaccacttcatttaagacc 39276479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 192415 - 192544
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  |||||   ||||||||||| |||||| |  ||| ||| |||||||||| ||||||||||||||||||||||||||     
T  192415 gtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttat 192514  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    |||||| || ||||||||||||||||||||    
T  192515 tttcagcggattaccacttcatctaagacc 192544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 20748 - 20876
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||||||  ||||||| ||||||    |||||||||| | ||||  | |||||||| ||||||||||||||||||||||||||||||||||||     
T  20748 gtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttat 20847  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||| ||||| |||||||||||||||||||    
T  20848 ttttagtggattaccacttcatctaagac 20876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 5943714 - 5943809
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || |||||||||||||||| | ||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||    
T  5943714 aaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaatttcaatggattatcacttcatctaagac 5943809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 49783740 - 49783835
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  || || ||||||  ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  49783740 aaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaatttcagtggtttaccacttcatctaagac 49783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 35110176 - 35110099
Alignment:
Q  231 tcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| || || |||||||||||||||||||    
T  35110176 tcatgacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaagac 35110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 26032846 - 26032930
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||| || ||||||||||||||||| || ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  26032846 cggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtttaatttcagtggattaccgcttcatctaagacc 26032930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 21938944 - 21939069
Alignment:
Q  185 ctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatt 281  Q
    ||||||||||| |||||||| | ||||    |||||| ||| |||||  |||||| |||| |||||| || |||||||||||||||||| ||||||||||    
T  21938944 ctagaagtcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtttaatt 21939043  T
Q  282 tcagtggtttaccacttcatctaaga 307  Q
    |||| |||||||||||||||||||||    
T  21939044 tcagcggtttaccacttcatctaaga 21939069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 35945851 - 35945924
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||| |||||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  35945851 tgacctgggttcgaacccggaacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaaga 35945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 7059499 - 7059595
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||  | ||| || ||||||||||||||| | | ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  7059499 aaaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccactttatctaagac 7059595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 7275734 - 7275806
Alignment:
Q  233 atgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||| ||| ||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7275734 atgactcggattcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttaccacttcatctaa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 2089033 - 2088908
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| |||||||   |||||| |||  | |||||| |||| ||||||||||| | | |||||||| |||| |||||||| ||    
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagttcaa 2088934  T
Q  280 tttcagtggtttaccacttcatctaa 305  Q
    ||||||||| ||||||||||||||||    
T  2088933 tttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 13109803 - 13109898
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  ||||| || | |||||  ||||||||  | |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13109803 aaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac 13109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 50106270 - 50106200
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatcta 304  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| || ||| ||||||||    
T  50106270 tgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattgccatttcatcta 50106200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 11688263 - 11688392
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  ||||||   |||||||||| ||| || |  |||||| ||||||||  | |||| ||| |||||||||||||||||     
T  11688263 gtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccctggttcgaattcaggacttcagagttgtgtgtgagtttat 11688362  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||| ||||||    
T  11688363 tttcagtggattaccacttcatccaagacc 11688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 46447449 - 46447373
Alignment:
Q  236 acccgggttcgaacccgggacctcacagttgtgtgtgagtttaa----tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||||| |||||||||||||    ||||||||| ||||||| |||||||||||    
T  46447449 acccgggttcgaacccgggacctcacagttatgtgtgagtttaattattttcagtggattaccacatcatctaagac 46447373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 4065960 - 4066090
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||| ||| ||||||||  ||||||   |||||||||||| | || |  ||| ||||||||||| | | ||||| ||| |||| ||||||||||    
T  4065960 tgtctagaagacctagctcaactgacaaataccgaaattgcaagactgaacgttgtgatccgggttcgaatctgagaccttacaattgtatgtgagttta 4066059  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||  ||||||||||||||||||||    
T  4066060 atttcagtgaattaccacttcatctaagacc 4066090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 778635 - 778702
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  778635 ggttcgaacctaggacctgacagttgtgtgtgagtttaatttcagtgaattaccaattcatctaagac 778702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 29587255 - 29587344
Alignment:
Q  186 tagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtg 272  Q
    |||||||||| |||||||| ||||||    |||||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 35224372 - 35224430
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtg 270  Q
    |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  35224372 aaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 13097339 - 13097432
Alignment:
Q  215 attgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||  ||||| || |||||||| ||| ||||  | ||||||||||||| |||||||||||||| | ||| |||||||||||||||||||    
T  13097339 attgcaaggtcggacgtcgtgacccggattcaaacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatctaagac 13097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 32982400 - 32982351
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  32982400 tcacagttgtgtgtgagtttgatttcagtggtttactacttcatctaaga 32982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 38817292 - 38817199
Alignment:
Q  215 attgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| |||||||||| || ||| ||| ||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| || |||||||||    
T  38817292 attgaaagaccggacgtcgtgatccgagttcgaacccgagacctcacaattgtgtgtgaatttaattttaattgtttaccattttatctaagac 38817199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 3716410 - 3716490
Alignment:
Q  228 acatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| || ||||||||| | ||||||||||||||||||||||||| ||| ||||| ||  |||||||||| ||||    
T  3716410 acatcatgactcgagttcgaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatcttagac 3716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 26264618 - 26264537
Alignment:
Q  226 ggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||| ||||| ||| | |||||||| |  |||||||||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  26264618 ggacgtcatgtcccagattcgaacctgaaacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga 26264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 13183271 - 13183179
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||  |||||||| | | ||| ||| |||||  | |||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  13183271 aaattgcaaggtcggacatcgtaatccgagtttgaacctagaaccttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 9886946 - 9886891
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||| |||||| |||||||||||||| ||| ||  ||||||||||||||||||||    
T  9886946 gacctaacagttatgtgtgagtttaatatcactgaattaccacttcatctaagacc 9886891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 16770212 - 16770177
Alignment:
Q  252 gggacctcacagttgtgtgtgagtttaatttcagtg 287  Q
    ||||||||||||||||||||||||||| ||||||||    
T  16770212 gggacctcacagttgtgtgtgagtttattttcagtg 16770177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 34305707 - 34305652
Alignment:
Q  253 ggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| |||||||||| ||| |||||||||||| ||| |||||||||||| ||||||    
T  34305707 ggacttcacagttgtttgtaagtttaatttcattggattaccacttcatttaagac 34305652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 25931207 - 25931157
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| ||||||||||||||||||||| | | |||||||||||||| ||||    
T  25931207 tcacaattgtgtgtgagtttaatttcaatagattaccacttcatctgagac 25931157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 39284349 - 39284415
Alignment:
Q  239 cgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||||   |||||||||||||| ||||||||||||||  |||| |||| | |||||||||    
T  39284349 cgggttcgaacctaagacctcacagttgtatgtgagtttaatttttgtggattactatttcatctaa 39284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 3716644 - 3716713
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 282  Q
    |||||||||| ||| || |||||| |||| ||  ||| | | ||||||||||||||||||||||||||||    
T  3716644 aaattgcaaggccgaacgtcatgatccggatttaaactcagaacctcacagttgtgtgtgagtttaattt 3716713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 33621492 - 33621623
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33621492 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 33621591  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||||    
T  33621592 aatttcagtggtttaccacttcatctaagacc 33621623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 33704216 - 33704345
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33704315  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| |||||||||||| |||||||    
T  33704316 tttcagtggattaccacttcatttaagacc 33704345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 4464160 - 4464256
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4464160 aaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 4464256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 28322932 - 28323060
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||     
T  28322932 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 28323031  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||||    
T  28323032 tttcagtggtttaccacttcatctaagac 28323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 21000692 - 21000820
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| ||| || |||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  21000692 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtgggtttaa 21000791  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||| ||||    
T  21000792 tttcagtggtttaccacttcatctgagac 21000820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 361010 - 361139
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||| | ||||| || ||||||   ||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||| | ||||||||||    
T  361010 tgtctagaagtcttagctcatctggcaaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagttta 361109  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| ||| |||||||||||||||    
T  361110 atttcagtggattaacacttcatctaagac 361139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 2959148 - 2959278
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    ||||||||||||||  ||||||||||||||    |||||||||| ||||| ||| ||||   |||||||||||| |||||||||||||||||||||||||    
T  2959148 tgtctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagttta 2959247  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
    ||||| ||||  ||||||||||||| |||||    
T  2959248 atttccgtggaataccacttcatcttagacc 2959278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 19145504 - 19145598
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || |||||||  || ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  19145504 aaattgcaaggccggacgtcgtgacccgtttt-gaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaagac 19145598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 21037291 - 21037419
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||| || |||||||| ||||||    |||||||||| |||||| |  |||| |||||||||| |||| ||||||||||||||||||||||||     
T  21037291 gtctagaagttctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatccgg-acctcacagttgtgtgtgagtttat 21037389  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||  ||||||||||||||||||||    
T  21037390 tttcagtgaattaccacttcatctaagacc 21037419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 307
Target Start/End: Original strand, 12252023 - 12252150
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  ||||||   | ||||||||||||||  || ||||| ||||| ||||||| ||||||| ||||||||||||||||||    
T  12252023 gtctagaagtcctagctcaactgacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagtttaa 12252122  T
Q  280 tttcagtggtttaccacttcatctaaga 307  Q
    ||| | ||| |||||||||||| |||||    
T  12252123 ttttaatggcttaccacttcatttaaga 12252150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 35218700 - 35218639
Alignment:
Q  248 acccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  35218700 acccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 35218639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 278
Target Start/End: Original strand, 11572008 - 11572106
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    ||||||||||||| ||||||||| |||||    |||||| ||| || ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  11572008 gtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 11572106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 29009734 - 29009650
Alignment:
Q  224 ccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||||||||||  |||||||| ||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||||    
T  29009734 ccggacgtcatgacccgaattcgaacctgggacctcacagttgtgtgtgagtttatttttagtgaattaccacttcatctaagac 29009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 24619207 - 24619079
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||||||  |||||||  |||||   ||||||| ||| ||| || || ||||||| |||||| |||| ||||||| | ||||||||||||||||    
T  24619207 gtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagtttaa 24619108  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||| | |||||||||||||||||||    
T  24619107 tttcagtcgattaccacttcatctaagac 24619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 22576214 - 22576309
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| |||| || ||||| |||||| | ||||||||||| ||||||||||| ||||||||||| |||||| ||  |||||||||| ||||||||    
T  22576214 aaattgaaagatcgaacatcgtgacccagattcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaagac 22576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 7613336 - 7613425
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcaca-gttgtgtgtgagtttaatttcagtggtttaccacttcat 301  Q
    |||||||||||||||| ||| |||| | |||||||||| | ||||||||| | | ||| ||||||||||||||||| |||||||||||||    
T  7613336 aaattgcaagaccggatatcgtgactcaggttcgaacctgagacctcacaagatatgtatgagtttaatttcagtgatttaccacttcat 7613425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 16518455 - 16518549
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||  ||||| |  ||||| |||||||||||| ||| ||||||||||||  |||||||| ||||||||| |||||| ||||||||||||    
T  16518455 aaaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagttgtg--tgagtttattttcagtggattaccatttcatctaagac 16518549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 4610906 - 4610833
Alignment:
Q  227 gacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||| |||||||||||||||||||        | ||||||||||||||||||||| ||||||    
T  4610906 gacatcatgacccgggttcgaacctgggacctcacagttgtgtg--------agttcagtggtttaccacttcatttaagac 4610833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 9454778 - 9454732
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcat 301  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  9454778 acctcacagttatatgtgagtttaatttcagtggtttaccacttcat 9454732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 10999459 - 10999416
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttca 300  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  10999459 ctcacagttgtatgtgagtttaatttcagtggattaccacttca 10999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 28592182 - 28592128
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| || |||||||||    
T  28592182 gacctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaagac 28592128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 584897 - 584783
Alignment:
Q  197 gctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttac 293  Q
    |||||||||||||||    |||||||||| | |||| || |||||||| ||||||  |||||||||||| || | ||||||||| ||||||| || || |    
T  584897 gctcaactagcaaatgccgaaattgcaaggc-ggacgtcgtgacccggattcgaattcgggacctcacaattttatgtgagtttgatttcagaggattgc 584799  T
Q  294 cacttcatctaagacc 309  Q
    |||||||| |||||||    
T  584798 cacttcatataagacc 584783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 17590436 - 17590391
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||    
T  17590436 tgactcgggttcgaacccggagcctcacagttgtgtgtgagtttaa 17590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 32289408 - 32289473
Alignment:
Q  243 ttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||| || |||||||||||||||||| |||||| | ||||||  ||||||||||||| |||||    
T  32289408 ttcgaactcgagacctcacagttgtgtgtaagtttattatcagtgaattaccacttcatcaaagac 32289473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 7014380 - 7014313
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||| ||||||||||  |||||| | || | |||||||||||||||||||  ||||||||||||||||    
T  7014380 ccggattcgaacccgaaacctcataattttatgtgagtttaatttcagtgtattaccacttcatctaa 7014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 26567576 - 26567522
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||| ||| |||||| |||| |||||||||||||||||||| || ||||||    
T  26567576 acctcacaattgcgtgtgaatttagtttcagtggtttaccacttcttccaagacc 26567522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 11456044 - 11456101
Alignment:
Q  251 cgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| | ||||||||||||||| ||  ||| | |||||||||||||||||||    
T  11456044 cgggacctcataattgtgtgtgagtttatttctagtcgattaccacttcatctaagac 11456101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 31963755 - 31963714
Alignment:
Q  266 gtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||||||||||||| |||||||| ||||||||| |||||    
T  31963755 gtgtgtgagtttaatttaagtggttttccacttcatttaaga 31963714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 7487307 - 7487267
Alignment:
Q  269 tgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||||||| ||||||||| ||| ||||||    
T  7487307 tgtgagtttaatttcagtggcttaccactttatccaagacc 7487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 32353997 - 32353941
Alignment:
Q  252 gggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| ||||||||||||||||||||| ||||| | | |||||| || |||||||||    
T  32353997 gggacttcacagttgtgtgtgagtttattttcaattgattaccattttatctaagac 32353941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 7824584 - 7824453
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7824584 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 7824485  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    | ||||||||| ||||||||||||||||||||    
T  7824484 attttcagtggattaccacttcatctaagacc 7824453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 29689612 - 29689481
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29689612 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 29689513  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    | ||||||||| ||||||||||||||||||||    
T  29689512 attttcagtggattaccacttcatctaagacc 29689481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 54151809 - 54151680
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||     
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 54151710  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  54151709 tttcagtggattaccacttcatctaagacc 54151680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 54158266 - 54158395
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  54158366 tttcagtggattaccacttcatctaagacc 54158395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 42392933 - 42392804
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    ||||||||||  ||||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  42392933 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagtttaa 42392834  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||    
T  42392833 tttcagtggtttaccacttcatctaagacc 42392804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 43247778 - 43247649
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||   ||||||||||| |||||| |  ||||| |||||||||||||||||||||||||||||||||||||||     
T  43247778 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 43247679  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  43247678 tttcagtggattaccacttcatctaagacc 43247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 51666053 - 51665924
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||     
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttat 51665954  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  51665953 tttcagtggattaccacttcatctaagacc 51665924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 4601425 - 4601553
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  4601425 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 4601524  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||| ||||||||||||    
T  4601525 tttcagtggattaccagttcatctaagac 4601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 55018164 - 55018040
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    |||||||||||||||  ||||||| ||||||   ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  55018164 ttgtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 55018065  T
Q  278 aatttcagtggtttaccacttcatc 302  Q
    | ||||||||| |||||||||||||    
T  55018064 attttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 36229089 - 36228993
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  36229089 aaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctaagacc 36228993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 3113090 - 3112994
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| || | ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  3113090 aaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 3112994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 9349771 - 9349679
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||  ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  9349771 aaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 52500838 - 52500967
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||| |||||| |||||| ||||||||||||| |  ||||||||||||||||||||||||     
T  52500838 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtttat 52500937  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||| | ||||||||||||||||||||    
T  52500938 tttcagtagattaccacttcatctaagacc 52500967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 28844537 - 28844634
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta-atttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| |  ||||||||||||||||| || ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  28844537 aaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttatttttcagtggattaccacttcatctaagacc 28844634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 40756805 - 40756728
Alignment:
Q  230 atcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  40756805 atcatgatccggattcgaacccgagacctcacagttgcgtgtgagtttaatttcagtagtttaccacttcatctaaga 40756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 306
Target Start/End: Original strand, 1778851 - 1778977
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  |||||    |||||||||| ||||||||  |||||||||||||||||||| |||||||| |||||| ||| ||||     
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaatttat 1778950  T
Q  280 tttcagtggtttaccacttcatctaag 306  Q
    ||||| ||| |||||||||||||||||    
T  1778951 tttcaatggattaccacttcatctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 33334606 - 33334736
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||  |||||| |  ||||| | ||||||| ||||||||||||||||||||||||||||    
T  33334606 ttgtctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagttt 33334705  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| | ||| |||||||| ||||||    
T  33334706 aatttcagtagattatcacttcatataagac 33334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 475375 - 475281
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  ||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  475375 aaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagtttaa-ttcagtgaattaccacttcatctaagac 475281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 41377584 - 41377708
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||   ||||||| ||| |||||| |||||| || |||||||||||||||||||||     ||||||||||||     
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac-----tgtgtgagtttat 41377678  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    |||||| || ||||||||||||||||||||    
T  41377679 tttcagcggattaccacttcatctaagacc 41377708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 38257398 - 38257304
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||||||  ||||| || ||||| |||||||||||| | |||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  38257398 aaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaaga 38257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 7958627 - 7958694
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||    
T  7958627 ccgggttcgaacccgggacctcacagttatgtgtaagtttatttttagtggattaccacttcatctaa 7958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 32001519 - 32001424
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||| ||| ||||| ||| || ||||||||| || || |||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  32001519 aaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagtttattttcagtgatttaccacttcatataagac 32001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 47635099 - 47635005
Alignment:
Q  214 aattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||  |||||||  ||||| ||||||||| || ||||||| ||||| ||||| |||||||||||||| | |||||||||||||||||||    
T  47635099 aattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtttaatttcagttgattaccacttcatctaagac 47635005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 307
Target Start/End: Complemental strand, 35461607 - 35461480
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||| || |||||||| ||||||    ||||||||||  ||||| |  ||| |||||||||||||||| ||||||||||||||||||||||||     
T  35461607 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtttat 35461508  T
Q  280 tttcagtggtttaccacttcatctaaga 307  Q
    |||| || | ||| || |||||||||||    
T  35461507 tttctgtagattatcatttcatctaaga 35461480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 55320455 - 55320400
Alignment:
Q  253 ggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  55320455 ggacctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 55320400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 43775285 - 43775351
Alignment:
Q  242 gttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||| |||| | ||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  43775285 gttcgaatccggaatctcacagttgtatttgagtttaatttcagtggattaccacttcatctaagac 43775351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 29750654 - 29750749
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| | |||| || |||||||| |||||||  | ||||||||| ||||| ||||||| |||| |||||| ||||||||||||||||||||    
T  29750654 aaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgagttaaatt-cagtggattaccacttcatctaagacc 29750749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 448971 - 448884
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttc 299  Q
    ||||||| ||| |||||| || ||| |||  ||||||||  ||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  448971 aaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtttaattttagtggattaccacttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 27230700 - 27230794
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| || |||||| ||||| || ||| ||| |||||  |||||||||||||||| |||||||||||||  |||||||||||||| ||||    
T  27230700 aaattgcaaggccagacatcgtgacctggattcaaactcgggat-tcacagttgtgtgtgaatttaatttcagtgaattaccacttcatctcagac 27230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 8137727 - 8137633
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||  ||||| |||||||||| ||| ||| | |  ||||||||||||||||  |||||||||||| ||| ||||||||| |||||||||    
T  8137727 aaaattgcaaggtcggacgtcatgacccgagtttgaatctgaaacctcacagttgtgtg--agtttaatttcaatggcttaccactttatctaagac 8137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 2590896 - 2590810
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| ||| ||||| ||| | |||||||||||| |||||||||         |||||||||||||||||| |||||||||||||||||||    
T  2590896 aaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac---------tgagtttaatttcagtggattaccacttcatctaagac 2590810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 53182808 - 53182858
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||| || |||||||||||||||| || |||||||||||||||||||    
T  53182808 acctcacaattatgtgtgagtttaattttaggggtttaccacttcatctaa 53182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 8151406 - 8151471
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatct 303  Q
    ||||||||||||||| || ||||||||| ||||| |||||||||||| ||| |||||  |||||||    
T  8151406 ccgggttcgaacccgagatctcacagttatgtgtcagtttaatttcaatggattaccggttcatct 8151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 47770410 - 47770451
Alignment:
Q  267 tgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  47770410 tgtgtgagtttaatttcaatggtttatcacttcatctaagac 47770451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 26511903 - 26511946
Alignment:
Q  265 tgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||| |||||||||  ||||||||||||||    
T  26511903 tgtgtgtgagtttaatttaagtggtttaatacttcatctaagac 26511946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 50729598 - 50729652
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||||| | |||||||||||||||| | | |||||||||||||||||||    
T  50729598 gacctcgcagttttatgtgagtttaatttcaatagattaccacttcatctaagac 50729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 50783251 - 50783197
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||||| | |||||||||||||||| | | |||||||||||||||||||    
T  50783251 gacctcgcagttttatgtgagtttaatttcaatagattaccacttcatctaagac 50783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 35716997 - 35717038
Alignment:
Q  264 ttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||||||||||| | || |||||||||||||||||    
T  35716997 ttgtgtgtgagtttaattttaatgatttaccacttcatctaa 35717038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 51054760 - 51054829
Alignment:
Q  239 cgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||| |   |||||| | |||| ||| |||||||||| ||||| |||||||||||||||||||    
T  51054760 cgggttcgaactcaaaacctcataattgtttgtaagtttaatttaagtggattaccacttcatctaagac 51054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 31305795 - 31305743
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||| ||| ||||| ||| ||||| ||||| ||||||||||    
T  31305795 ctcacagttgtgtgtgtgttaaatttaagtagtttatcactttatctaagacc 31305743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 43023695 - 43023743
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgg 288  Q
    ||||||||| |||| |||||||| || |||||||||||||||| |||||    
T  43023695 gggttcgaatccggaacctcacatttatgtgtgagtttaatttaagtgg 43023743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 25546404 - 25546274
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| | ||||    |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25546404 tgtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagttta 25546305  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||||||||||||||||||    
T  25546304 atttcagtggtttaccacttcatctaagacc 25546274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 23358182 - 23358314
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| |||||||| |||||||   |||||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  23358182 tttgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtt 23358281  T
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    || ||||||||| ||||||||||||||||||||    
T  23358282 tattttcagtggattaccacttcatctaagacc 23358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 31770662 - 31770532
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  31770662 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 31770563  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    | ||||||||| |||||||||||||||||||    
T  31770562 attttcagtggattaccacttcatctaagac 31770532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 4106738 - 4106867
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| || ||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 4106837  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  4106838 tttcagtggattaccacttcatctaagacc 4106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 25112378 - 25112246
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| |||||||| |||||||   ||||||||||  ||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  25112378 tttgtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtt 25112279  T
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    || ||||||||| ||||||||||||||||||||    
T  25112278 tattttcagtggattaccacttcatctaagacc 25112246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 44083939 - 44084065
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||   ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  44083939 tgtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 44084038  T
Q  279 atttcagtggtttaccacttcatctaa 305  Q
     ||||||||| ||||||||||||||||    
T  44084039 ttttcagtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 47570813 - 47570717
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  47570813 aaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 47570717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 4107342 - 4107437
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4107342 aaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 4107437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 40058238 - 40058367
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||||||  ||||||| ||||||   ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||| ||||||||     
T  40058238 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 40058337  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  40058338 tttcagtggattaccacttcatctaagacc 40058367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 47250378 - 47250250
Alignment:
Q  184 tctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaat 280  Q
    |||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||||||||||||||| |||| |||  ||||||||||||||||| |    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtttatt 47250279  T
Q  281 ttcagtggtttaccacttcatctaagacc 309  Q
    |||||||| ||||||||||||||||||||    
T  47250278 ttcagtggattaccacttcatctaagacc 47250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 47557832 - 47557909
Alignment:
Q  231 tcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47557832 tcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaatttcagtggtttaccacttcatctaagac 47557909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 2146633 - 2146765
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| |||||||| | ||||    |||||||||| |||||| |  ||||||||||||||||||  ||||||||||||||||||| |||    
T  2146633 tttgtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtt 2146732  T
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    || ||||||||| ||||||||||||||||||||    
T  2146733 tattttcagtggattaccacttcatctaagacc 2146765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 38781303 - 38781207
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| ||| |  || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  38781303 aaattgcaaggccgaatgtcgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 38781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 27229573 - 27229484
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgag-tttaatttcagtggtttaccacttcat 301  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  27229573 aaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttcagtggattaccacttcat 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 5587313 - 5587409
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| ||||||||| ||| |||||||||||||| |||||||||| ||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  5587313 aaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagacc 5587409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 5592274 - 5592370
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| ||||||||| ||| |||||||||||||| |||||||||| ||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  5592274 aaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagacc 5592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 5772914 - 5772818
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||  ||||||   |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5772914 aaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatttaagacc 5772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 8439076 - 8439206
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    |||| |||||||||| | |||||| ||||||   |||||||||||  ||||| |  |||||||| ||||||||| ||||||||||||||||||||| |||    
T  8439076 ttgtttagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaattt 8439175  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    | ||||||||| |||||||||||||||||||    
T  8439176 attttcagtggattaccacttcatctaagac 8439206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 11355856 - 11355951
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  ||||| | |||| | || ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11355856 aaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac 11355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 39514078 - 39513983
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || ||||||| ||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||||||| ||||    
T  39514078 aaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatctgagac 39513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 43753849 - 43753754
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgag-tttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||| |||||| || ||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  43753849 aaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaatttcagtggattaccacttcatctaaga 43753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 48146807 - 48146882
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||    
T  48146807 tgacccgggttcgaacccgggacctcacagttgtgtgtgagttaattttcattggattaccacttcatctaagacc 48146882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 29484850 - 29484755
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| |||||| | ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||| ||||||    
T  29484850 aaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagtggattatcacttcatataagac 29484755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 303
Target Start/End: Complemental strand, 18506403 - 18506281
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| || ||||||  ||||   |||||||||||  |||| ||||||| ||| ||||||||||| ||| ||||||| ||||||||||||||    
T  18506403 gtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcggatatcatgatccgagttcgaacccgagacttcacagt-gtgtgtgagtttaa 18506305  T
Q  280 tttcagtggtttaccacttcatct 303  Q
    ||||||||||||||| ||||||||    
T  18506304 tttcagtggtttaccgcttcatct 18506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 4001937 - 4001844
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||  || |||||||||||||||| ||||||||| ||| ||||||  |||||||||||| |||||||||||||||||||||||    
T  4001937 aaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcagctgtgtg--agtttaatttcaatggtttaccacttcatctaagac 4001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 41183848 - 41183944
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| || ||||| ||||||||||||   ||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||    
T  41183848 aaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcacttcatctaagacc 41183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 7162916 - 7162790
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||| ||||||| |||||||| ||||||    |||||| ||| |||||| |  |||||||||||||||| |||||||||||| |||||||  ||||||     
T  7162916 gtctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaattgtgtg--agtttat 7162819  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  7162818 tttcagtggattaccacttcatctaagac 7162790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 10220601 - 10220473
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    ||||||||||||||  ||||||| |||||    ||||||| ||| | |||| |||||| | ||||||||| |||  ||||||||||| ||||||||||||    
T  10220601 tgtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaatccgaaacctcacagttttgtgtgagttta 10220502  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||| ||||||||||||    
T  10220501 atttcagtggtttacca-ttcatctaagac 10220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 35309887 - 35309982
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||| |||||| || ||||| || |||||| |||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  35309887 aaattgtaaggccggacgtcttgacctggtttcgaatccgggatctcacaattgtgtgcgagtttaatttcagtggtttatcacttcatctaagac 35309982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 231 - 308
Target Start/End: Complemental strand, 31288301 - 31288224
Alignment:
Q  231 tcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| | ||||||||| | || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31288301 tcatgatctgggttcgaatctggaatctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatctaagac 31288224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 32606461 - 32606330
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    ||||||||||||| ||  |||||||  ||||||   |||||||||| |||||| || |||||| |||||||||||| ||||| |||||| | ||||| ||    
T  32606461 tttgtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatt 32606362  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||  |||||| ||||||||||||    
T  32606361 taatttcagtgaattaccaattcatctaagac 32606330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 38033774 - 38033858
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||  ||| |||||||| || ||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||    
T  38033774 cggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttattttcagtggagtaccacttcatctatgacc 38033858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 46427392 - 46427487
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||   |||| ||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  46427392 aaaattgcaaggttggacgtcatgactcggattcgaatccggaacctcacagttgtgtgtgagtttaatttcagt-gtttaccacttaaactaagac 46427487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 48444282 - 48444152
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| ||||||||   ||||    |||||| ||||| |||| || ||| | |||||||||||| | || |||||||||||||| |||||    
T  48444282 ttgtctagaagtcctagctcaactgaaaaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagttt 48444183  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  |||||||||||||||||||    
T  48444182 aatttcagtgaattaccacttcatctaagac 48444152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 15635007 - 15634882
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||| | |||||||||||||||    |||||| ||   ||||| || |||||||| |||||| |||| || |||||||||||||||||||||     
T  15635007 gtctagaagtcatagctcaactagcaaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagtttat 15634908  T
Q  280 tttcagtggtttaccacttcatctaa 305  Q
    ||||||| | ||||||||||||||||    
T  15634907 tttcagtagattaccacttcatctaa 15634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 28603044 - 28603139
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| ||||| |||||| || ||||| | ||||||||||| ||| ||||| |||| |||||||||||| ||||||| |||||||||||||||||||    
T  28603044 aaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattaccacttcatctaagac 28603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 43203360 - 43203435
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||| ||  |||||||| |||||||    
T  43203360 tgacccgggttcgaacccgggaccttacagttgtgtgtgagtttatttacagtggattttcacttcatataagacc 43203435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 47961085 - 47960972
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||| |  ||||||| ||||||   |||||| ||||  | ||| |||||| ||||||||||||||||||||||  ||||||||||||||||    
T  47961085 ttgtctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagttt 47960986  T
Q  278 aatttcagtggttt 291  Q
    ||||||| ||||||    
T  47960985 aatttcaatggttt 47960972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 34763510 - 34763560
Alignment:
Q  248 acccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccactt 298  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34763510 acccgggacctcacagttgtgtgtgagtttaatttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 19630718 - 19630667
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19630718 tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 19630667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 13887207 - 13887282
Alignment:
Q  216 ttgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttac 293  Q
    |||||||||||||| || |||||| ||||||||||||| ||||||||||  ||| |||||||||||||||||| ||||    
T  13887207 ttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagt--tgtatgagtttaatttcagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 35577989 - 35577876
Alignment:
Q  198 ctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttacc 294  Q
    ||||||||||||||   ||||||  |||| ||||  || ||||||| ||||||||||| ||| ||||| |||||||| |||||||||||| ||| ||||     
T  35577989 ctcaactagcaaatgctaaaattttaagatcggatgtcgtgacccgagttcgaacccgagacttcacaattgtgtgtaagtttaatttcaatggattaca 35577890  T
Q  295 acttcatctaagac 308  Q
    | ||||||||||||    
T  35577889 atttcatctaagac 35577876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 42081743 - 42081619
Alignment:
Q  184 tctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaat 280  Q
    |||||||||||| ||||| || ||||||   |||||||||||| || || |  ||| ||||||||||||| || ||||||||||||||||  |||||| |    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaacctgg-acctcacagttgtgtg--agtttatt 42081647  T
Q  281 ttcagtggtttaccacttcatctaagac 308  Q
    |||||||  ||||||||| |||||||||    
T  42081646 ttcagtgaattaccactttatctaagac 42081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 27915631 - 27915579
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  27915631 ctcacagttgtgtatgagtttaatttcaatgaattaccacttcatctaagacc 27915579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 5463020 - 5462949
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||| |||||||| | || |||||||||||||||||||||||||||| |||   |||||||||||| |||||    
T  5463020 ccggattcgaacctgagatctcacagttgtgtgtgagtttaatttcaatggagaaccacttcatcttagacc 5462949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 43171034 - 43170939
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || | |||| ||||| || | | ||| || ||||||| |||||||||||||||| ||| ||||||| |||||||||||    
T  43171034 aaattgcaaggccggacgtcgtaacccaggttcaaatcggagacttcccagttgtatgtgagtttaatttcaatggattaccacgtcatctaagac 43170939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 40657603 - 40657657
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||| |||| |||| ||||||||||||||||| ||| |||||||||||||||    
T  40657603 gacctcatagttatgtgcgagtttaatttcagtggattatcacttcatctaagac 40657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 25872824 - 25872892
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||   ||||| ||| |||||| |||||||| |||| ||| |||||||||||||||||||||    
T  25872824 ggttcgaacctatgaccttacaattgtgtatgagtttattttctgtgatttaccacttcatctaagacc 25872892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 47960889 - 47960857
Alignment:
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||||||||||||||||||||    
T  47960889 taatttcagtggtttaccacttcatctaagacc 47960857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 17753007 - 17753100
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcaca---gttgtgtgtgagtttaatttcagtggtttaccacttcatct 303  Q
    ||||||||||| || | |||||||  ||||||| || |||||||||||||   |||||||||||||| ||||||| ||  |||||| |||||||    
T  17753007 aaattgcaagatcgaatatcatgattcgggttcaaatccgggacctcacaattgttgtgtgtgagttaaatttcaatgaattaccaattcatct 17753100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 23036244 - 23036208
Alignment:
Q  269 tgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  23036244 tgtgagtttaatttcaatggattaccacttcatctaa 23036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 25050009 - 25049965
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcat 301  Q
    ||||||||||| |||||||||||||| ||||| |||||| |||||    
T  25050009 ctcacagttgtatgtgagtttaatttaagtggattaccatttcat 25049965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 7e-43; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 10639735 - 10639605
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10639735 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 10639636  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  10639635 ttttcagtggattaccacttcatctaagacc 10639605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 33083682 - 33083554
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33083583  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  33083582 tttcagtggattaccacttcatctaagac 33083554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 19048754 - 19048882
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||     
T  19048754 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 19048853  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||||    
T  19048854 tttcagtggtttaccacttcatctaagac 19048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 39831571 - 39831444
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||| ||||||| |||||||| |||||||   |||||||||| |||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  39831571 gtctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaacc-gggacctcacaattgtgtgtgagtttaa 39831473  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||||    
T  39831472 tttcagtggtttaccacttcatctaagac 39831444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 11459714 - 11459844
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  11459714 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgttta 11459813  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||| ||| ||||||||||||||||||||    
T  11459814 ttttcaatggattaccacttcatctaagacc 11459844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 26605624 - 26605753
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||| ||||     
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaatttat 26605723  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  26605724 tttcagtggattaccacttcatctaagacc 26605753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 37197705 - 37197609
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  37197705 aaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 37197609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 29659347 - 29659218
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||   ||||||| ||| ||| ||||  ||||||||||||||||||  |||||||||||||||||||||||||    
T  29659347 tgtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagttta 29659248  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
     ||||||||| |||||||||||||||||||    
T  29659247 ttttcagtggattaccacttcatctaagac 29659218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 39535663 - 39535534
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    ||||||||||||||  ||||||||||||||    |||||||||| |||||| || |||||||||||||||||||||||||||||||| | ||||||||||    
T  39535663 tgtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagttta 39535564  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
    |||| || || |||||||||||||||||||    
T  39535563 atttgagcggattaccacttcatctaagac 39535534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 23839859 - 23839987
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||||||  ||||||| ||||||   ||||||||||| |||||| |  ||||| ||||||||||| |||||||||||||||||||||||||||     
T  23839859 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagtttat 23839958  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  23839959 tttcagtggattaccacttcatctaagac 23839987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 34460366 - 34460498
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| ||||||||  |||||    |||||||||| |||||| |  |||||||||||||||||| | ||||||||||||||||||||||    
T  34460366 tttgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtt 34460465  T
Q  277 taatttcagtggtttaccacttcatctaagacc 309  Q
    || ||||||||| ||||||||||||||||||||    
T  34460466 tattttcagtggattaccacttcatctaagacc 34460498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 11708677 - 11708803
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||| ||| |||||| |  |||||||||||||||||| |||||||||||||||||||| |||||    
T  11708677 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggttta 11708776  T
Q  279 atttcagtggtttaccacttcatctaa 305  Q
     ||||||||| ||||||||||||||||    
T  11708777 ttttcagtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 19537306 - 19537436
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| | |||||| ||||||    |||||||||| |||||| |  ||| |||||||||||||||| |||||||||||||||||| |||||    
T  19537306 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgttta 19537405  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  19537406 ttttcagtggattaccacttcatctaagacc 19537436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 11816680 - 11816549
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgag-ttt 277  Q
    |||| ||||||||| |||||||| ||||||    ||||||||||  ||||| || ||||| |||||||||||||| ||||||||||||| |||||| |||    
T  11816680 tgtccagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagtttt 11816581  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||| ||||||||||||||||||||    
T  11816580 aatttcagtggattaccacttcatctaagacc 11816549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 19816218 - 19816349
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| |||||||   |||||||||| |||||| |  ||||||||||| |||||||| ||||| ||||||||| |||||||    
T  19816218 ttgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagttt 19816317  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    | ||||||| | |||| |||||||||||||||    
T  19816318 attttcagtagattacaacttcatctaagacc 19816349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 45125294 - 45125164
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||| ||| |||||| |  ||||  |||||||||| ||| ||||||||||||||||||||||||    
T  45125294 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagttta 45125195  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  45125194 ttttcagtggattaccacttcatctaagacc 45125164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 27138045 - 27137917
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  |||||    |||||| ||| ||| ||||| ||||| ||||||||||||||||||| |||||| | |||||||||||    
T  27138045 gtctagaagtcctagctcaactgacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtttaa 27137947  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  27137946 tttcagtggattaccacttcatctaagacc 27137917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 4851364 - 4851449
Alignment:
Q  224 ccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||| || ||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  4851364 ccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaattttagtggattaccacttcatccaagacc 4851449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 306
Target Start/End: Original strand, 15782635 - 15782715
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaag 306  Q
    ||||| |||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15782635 cggacgtcatgacccgggttcgaacccgagaccttacagt-gtgtgggagtttaatttcagtggtttaccacttcatctaag 15782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 43684102 - 43684194
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||| ||||||| ||||||  |||||||||||||||||| |||| || |||||||||||| ||||| ||| ||||||||||||||||    
T  43684102 aaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtttattttcactggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 7275957 - 7275886
Alignment:
Q  237 cccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| | ||| |||||||||||||||||||    
T  7275957 cccgggttcgaacccgggacctcacagttgtgtgtaaatttaattttaatggattaccacttcatctaagac 7275886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 42578236 - 42578296
Alignment:
Q  248 acccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  42578236 acccggtacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 42578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 20497657 - 20497592
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaag 306  Q
    ||||| ||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  20497657 ggttcaaacccggaacctcacaattgtatgtgagttttatttcagtggtttaccacttcatctaag 20497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 33001762 - 33001830
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| | ||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||    
T  33001762 gggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaagac 33001830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 38440292 - 38440197
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || |||||||| | |||||| | ||||||  || | |||||||||||||||| ||||| |||||||||||||||||||    
T  38440292 aaattgcaaggccggacgtcgtgacccggatccgaacctgagacctcctagctatgtgtgagtttaattttagtggattaccacttcatctaagac 38440197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 43778542 - 43778468
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| |||||||||||   ||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  43778542 tgacctgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattaccacttcatctaagac 43778468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 44181952 - 44181887
Alignment:
Q  243 ttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||| ||| ||||| |||||||||    
T  44181952 ttcgaatccgggatctcacagttgtgtgtgagtttattttcagtggattatcacttaatctaagac 44181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 4800909 - 4801001
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||| | |||| || ||||| | |||||||||||| ||||| | ||| ||||||||||||||| |||||  ||||||||||||||||    
T  4800909 aaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattccagtgaattaccacttcatctaa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 16654396 - 16654488
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||| ||||||  | ||| ||| |||||||||||| |||||||||||||||||||||||| ||| ||||  || || ||||||||||    
T  16654396 aaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtttatttttagtgaattgccccttcatctaa 16654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 42025732 - 42025799
Alignment:
Q  242 gttcgaacccgggacctcacagttgtgtgtgagt-ttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| | |||||||| |||||||||||| |||||||||||||  ||||||||||||||||||    
T  42025732 gttcgaacccagaacctcacaattgtgtgtgagtcttaatttcagtggactaccacttcatctaagac 42025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 7349133 - 7349223
Alignment:
Q  215 attgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||| |||||| || ||| ||| ||||||| ||| |||||||||  | |||||||||||||||| ||||| | ||||||||||||||    
T  7349133 attgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagtttaattttagtggatcaccacttcatctaa 7349223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 40786304 - 40786212
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||| |||||| || |||||| ||||||||||   |||||| |||||| ||||||||||||||| ||||  ||| |||||| |||||    
T  40786304 aaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagtttaattttagtgaattatcacttcttctaa 40786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 38400502 - 38400569
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaat 280  Q
    ||||||||||| ||||| || ||||| ||||||||| || |||||||| ||||||||| |||||||||    
T  38400502 aaattgcaagatcggacgtcgtgaccagggttcgaatccaggacctcatagttgtgtgcgagtttaat 38400569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 40825240 - 40825161
Alignment:
Q  226 ggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||| |||||||||||||||||| ||| || ||  ||| |||||||||||||| ||||| ||| ||| ||||||||||||    
T  40825240 ggacgtcatgacccgggttcgaatccgagatcttccaggtgtgtgtgagtttattttcaatggattatcacttcatctaa 40825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 12366786 - 12366835
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtg 287  Q
    |||| ||| ||||||| |||||||||||||||||||||||||| ||||||    
T  12366786 ccggattcaaacccggaacctcacagttgtgtgtgagtttaatatcagtg 12366835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 13106452 - 13106493
Alignment:
Q  267 tgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  13106452 tgtgtgagttttatttcagtgatttaccacttcatctaagac 13106493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 21312237 - 21312331
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||| |||||||||| |  ||| | ||| ||||||| ||||||||||| |||||  |||||||| ||| ||||  |||||||||||||||||||    
T  21312237 aaaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaattgtg--tgagtttatttttagtgaattaccacttcatctaagac 21312331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 29726072 - 29726112
Alignment:
Q  237 cccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  29726072 cccgggttcgaacccgggacctcgcagttgtgtctgagttt 29726112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 34234596 - 34234657
Alignment:
Q  246 gaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||| ||||||| |||||||  |||||||||||||||| | | ||||||||||||||||||    
T  34234596 gaacccgagacctcatagttgtg--tgagtttaatttcagtagatcaccacttcatctaagacc 34234657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 45201938 - 45201880
Alignment:
Q  242 gttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||| ||| ||||||||||||||||||||     |||||||||||| |||||||||||||    
T  45201938 gttcgaactcggaacctcacagttgtgtgtgag-----tttcagtggtttgccacttcatctaa 45201880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 6055070 - 6055004
Alignment:
Q  243 ttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttacc-acttcatctaagac 308  Q
    ||||||| | |||||||| || |||||||||||||||||| ||||| ||||| |||| |||||||||    
T  6055070 ttcgaactcaggacctcatagctgtgtgtgagtttaattttagtggattacctactttatctaagac 6055004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 250
Target Start/End: Original strand, 8311361 - 8311399
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacc 250  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  8311361 aaaattgcaagatcggacatcatgacccaggttcgaacc 8311399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 15072151 - 15072200
Alignment:
Q  238 ccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgg 288  Q
    |||| |||||||||||||||||| | ||||||||| |||||||||||||||    
T  15072151 ccggattcgaacccgggacctcata-ttgtgtgtgtgtttaatttcagtgg 15072200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 990 - 861
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 891  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  890 tttcagtggattaccacttcatctaagacc 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 6602646 - 6602517
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6602547  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  6602546 tttcagtggattaccacttcatctaagacc 6602517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 6678099 - 6677970
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6678000  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  6677999 tttcagtggattaccacttcatctaagacc 6677970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 4531111 - 4530981
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||| | ||||||    |||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4531111 tgtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagttta 4531012  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||||||||||||||||||    
T  4531011 atttcagtggtttaccacttcatctaagacc 4530981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 35779625 - 35779496
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||   ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||     
T  35779625 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 35779526  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  35779525 tttcagtggattaccacttcatctaagacc 35779496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 32333113 - 32333243
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  32333113 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 32333212  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  32333213 ttttcagtggattaccacttcatctaagacc 32333243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 42192768 - 42192638
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  42192768 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagttta 42192669  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  42192668 ttttcagtggattaccacttcatctaagacc 42192638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 70651 - 70523
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    ||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||     
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttat 70552  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  70551 tttcagtggattaccacttcatctaagac 70523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 1470 - 1339
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    |||||||||||| || |||||||| ||||||   ||||||||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||||||    
T  1470 ttgtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagttt 1371  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    | ||||||||| ||||||||||||||||||||    
T  1370 attttcagtggattaccacttcatctaagacc 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 28817254 - 28817385
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    |||||||||| |||||| |  |||||||||||||||||||||| |||||||||||||||||||||    
T  28817254 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagttt 28817353  T
Q  278 aatttcagtggtttaccacttcatctaagacc 309  Q
    | ||||||||| ||||||||||||||||||||    
T  28817354 attttcagtggattaccacttcatctaagacc 28817385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 1078743 - 1078647
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1078743 aaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 1078647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 42885207 - 42885303
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  42885207 aaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 42885303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 39303307 - 39303438
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgag-tt 276  Q
    ||||| ||||||||| |||||||| ||||||    |||||||||| |||||| |||||||  ||||| ||||||| ||||||||||||||||||||| ||    
T  39303307 ttgtcaagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttt 39303406  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||| |||||||||||||||||||    
T  39303407 taatttcagtggattaccacttcatctaagac 39303438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 307
Target Start/End: Original strand, 40911221 - 40911347
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||| || |||||||| ||||||    |||||||||| |||||| || ||||||||||||||||| |||||||||||  |||||||||||||||    
T  40911221 gtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacc-gggacctcacaactgtgtgtgagtttaa 40911319  T
Q  280 tttcagtggtttaccacttcatctaaga 307  Q
    ||||||||| ||||||||||||||||||    
T  40911320 tttcagtggcttaccacttcatctaaga 40911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 5385371 - 5385459
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcat 301  Q
    |||||||||| | |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5385371 aaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcat 5385459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 7792661 - 7792790
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| | |||| |  |||| ||||||||||||||||| ||||||||||||||||||||||     
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttat 7792760  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| |||| |||||||||||||||    
T  7792761 tttcagtggattactacttcatctaagacc 7792790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 305
Target Start/End: Original strand, 7813322 - 7813447
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||  ||||||    |||||||||| |||||  |  |||| ||||||||||||||||||||||||||||||||||||||||     
T  7813322 gtctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 7813421  T
Q  280 tttcagtggtttaccacttcatctaa 305  Q
    ||||||||| ||||||||||||||||    
T  7813422 tttcagtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 31969815 - 31969720
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| |||| || ||| |||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  31969815 aaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaatttaatttcagtggtttaccacttcatctaagac 31969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 39435282 - 39435410
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||| || |||||||| ||||||   |||||||||||  ||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  39435282 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagtttaa 39435381  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||  |||| |||| ||||||||||||||    
T  39435382 tttatgtggattacgacttcatctaagac 39435410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 6099569 - 6099700
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| | |||||| ||||||    |||||||||| |||||| |||||||||| |||||||||||  |||||||| ||| | |||||||    
T  6099569 tttgtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtt 6099668  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    || ||| |||||||||||||||||||||||||    
T  6099669 tagttttagtggtttaccacttcatctaagac 6099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 31532220 - 31532128
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||| |||||| |  |||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31532220 aaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 13891144 - 13891218
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13891144 tgactcgggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaagac 13891218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 45264714 - 45264640
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  45264714 tgactcgggttcgaacccgggacctcacagttttgtgtgagtttaatttcagtggattaccacttcctctaagac 45264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 31695400 - 31695269
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    ||||||||||||| || |||||||| ||| ||   |||||||||||   |||  ||||||  ||| |||||||| ||||||||||| |||||||||||||    
T  31695400 tttgtctagaagttctagctcaactggcacatgtcaaaattgcaaggttggatgtcatgattcggattcgaacctgggacctcacaattgtgtgtgagtt 31695301  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    |||||||| |||||||||||||||||||||||    
T  31695300 taatttcaatggtttaccacttcatctaagac 31695269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 29425356 - 29425479
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||| | ||||||   ||||||||||| |||||| ||||||||||||      ||||||| ||| || |||||||||||||||    
T  29425356 tgtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgacccggg------cccgggatctcgcaattgtgtgtgagttta 29425449  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||||||||||||||||    
T  29425450 atttcagtggattaccacttcatctaagac 29425479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 33731538 - 33731464
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  33731538 tgacccgggttcaaactcgggacctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaagac 33731464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 307
Target Start/End: Original strand, 9292018 - 9292145
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||  |||||| |  |||||||  ||||||| |||||| |||||||||||||||||||||     
T  9292018 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagtttat 9292117  T
Q  280 tttcagtggtttaccacttcatctaaga 307  Q
    ||||||||| ||||||||||||||||||    
T  9292118 tttcagtggattaccacttcatctaaga 9292145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 10963368 - 10963241
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    ||||| |||| ||| || |  ||| || ||||||||||||||||||||||||||||||  ||||||     
T  10963368 gtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttgtgtg--agtttat 10963271  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  10963270 tttcagtggattaccacttcatctaagacc 10963241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 12534846 - 12534720
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| || ||| |||||||||||||| ||| ||||||||  || |||||||||     
T  12534846 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagt--tgcgtgagtttat 12534749  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||| | |||||||||||||||||||    
T  12534748 tttcagtagattaccacttcatctaagac 12534720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 3822450 - 3822524
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||  |||||||||| ||||||||    
T  3822450 tgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaattttagtgaattaccacttcttctaagac 3822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 246 - 308
Target Start/End: Original strand, 14400781 - 14400843
Alignment:
Q  246 gaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||||    
T  14400781 gaacccgggacctcacaattgtgagtgagtttaattcaagtggtttaccacttcatctaagac 14400843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 18386706 - 18386806
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    |||||||||||| || ||||||||  |||||    ||||||||||  ||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  18386706 ttgtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagttt 18386805  T
Q  278 a 278  Q
    |    
T  18386806 a 18386806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 9775110 - 9775042
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||| ||||||||||| |||||||||||||||| | ||| |||| ||||||||||||||    
T  9775110 gggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaagac 9775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 41849326 - 41849233
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||||||  ||||| || ||| | ||||||||| |||| ||||||| |||||||||||||||||||||||| | |||||| |||||||||||    
T  41849326 aaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttcagt-gattaccatttcatctaaga 41849233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 42364752 - 42364702
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  42364752 tcacagttgtgtgtgagtttaatttcagtagtttaccactttatctaagac 42364702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 18752401 - 18752468
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||||| ||  |||||||| |||||    
T  18752401 gggttcgaacccggaaccttacagttgtgtgtgggtttaatttcagtggattgacacttcatntaaga 18752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 7403790 - 7403696
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||| |||  ||||| || |||| || ||||||| ||| ||| |||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  7403790 aaaattgtaaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagt-gattaccacttcatctaaga 7403696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 20269607 - 20269657
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||||||||||    
T  20269607 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga 20269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 21056236 - 21056286
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||||||||||    
T  21056236 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga 21056286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 2907060 - 2907142
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttc-agtggtttaccacttcatctaagac 308  Q
    ||||| || ||| ||||||| |||||||||||||||||||  | || |||||||||||| ||||| |||||||||| ||||||||    
T  2907060 cggacgtcgtgatccgggtttgaacccgggacctcacagt--tatgggagtttaatttcaagtggattaccacttcgtctaagac 2907142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 40932786 - 40932834
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  40932786 ctcacagttgtgtgtgactttaattttagtagattaccacttcatctaa 40932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 41753108 - 41753004
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  |||||    ||||||||||||||||  || ||| |||  |||||||||   | ||||||||||||||| |||||||    
T  41753108 gtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtgatccgaattcgaacccaaaatctcacagttgtgtgtaagtttaa 41753009  T
Q  280 tttca 284  Q
    |||||    
T  41753008 tttca 41753004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 44124080 - 44124154
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||  |||||||| | ||| |||||||||||||| |||||||||||| ||  |||| ||||||| ||||||    
T  44124080 tgacccgaattcgaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcatataagac 44124154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 34739280 - 34739409
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  34739280 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 34739379  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  34739380 tttcagtggattaccacttcatctaagacc 34739409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 1173950 - 1174079
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  1173950 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagttta 1174049  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
     ||||||||| |||||||||||||||||||    
T  1174050 ttttcagtggattaccacttcatctaagac 1174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 43140034 - 43139906
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||| || |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 43139935  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||||||||||||||||||    
T  43139934 tttcagtggattaccacttcatctaagac 43139906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 53457822 - 53457952
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||||| |||||||| ||||||    ||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  53457822 ttgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagttt 53457921  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    | ||||||||| |||||||||||||||||||    
T  53457922 attttcagtggattaccacttcatctaagac 53457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 11277981 - 11278107
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||||||||||||||||||| ||||||||||||||||||    ||||||||||    
T  11277981 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagt----tgtgagttta 11278076  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||||||||||||||||||||||||    
T  11278077 atttcagtggtttaccacttcatctaagacc 11278107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 19849631 - 19849502
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||||||||||     
T  19849631 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 19849532  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||| ||||||||||||||||||||||||    
T  19849531 tttcaatggtttaccacttcatctaagacc 19849502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 26424985 - 26424857
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26424985 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggc-ggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 26424887  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  26424886 tttcagtggattaccacttcatctaagacc 26424857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 45874055 - 45874184
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| ||||||||  |||||   ||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||     
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45874154  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  45874155 tttcagtggattaccacttcatctaagacc 45874184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 28798519 - 28798388
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| | |||||| ||||||    |||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  28798519 tttgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtt 28798420  T
Q  277 taatttcagtggtttaccacttcatctaagac 308  Q
    || ||||||||| |||||||||||||||||||    
T  28798419 tattttcagtggattaccacttcatctaagac 28798388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 18257328 - 18257457
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    |||||||||| |||||| |||||| |||||||||| |||||||||||||||||||| |||||||||    
T  18257328 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagttta 18257427  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
     ||||||||| |||||||||||||||||||    
T  18257428 ttttcagtggattaccacttcatctaagac 18257457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 54768560 - 54768431
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||      
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagttttt 54768461  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  54768460 tttcagtggattaccacttcatctaagacc 54768431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 238587 - 238457
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| ||||||||  |||||    |||||||||| | ||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  238587 tgtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagttta 238488  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||| ||||||    
T  238487 ttttcagtggattaccacttcatcgaagacc 238457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 19225261 - 19225387
Alignment:
Q  185 ctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatt 281  Q
    ||||||||||| |||||||| ||||||    |||||| ||  |||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||| ||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtt 19225360  T
Q  282 tcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||    
T  19225361 tcagtggtttaccacttcatctaagac 19225387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 309
Target Start/End: Complemental strand, 23417603 - 23417482
Alignment:
Q  191 gtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtg 287  Q
    ||||| |||||||| ||||||   ||||||||||| |||||| |  ||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtg 23417504  T
Q  288 gtttaccacttcatctaagacc 309  Q
    | ||||||||||||||||||||    
T  23417503 gattaccacttcatctaagacc 23417482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 55214684 - 55214779
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||    
T  55214684 aaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccactttatctaaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 309
Target Start/End: Original strand, 12735430 - 12735560
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    ||||||||||| || ||||||||  |||||   ||||||| ||| || ||| |  |||||||||||||||||| ||||||||||||||||||||||||||    
T  12735430 tgtctagaagtactagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagttta 12735529  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  12735530 ttttcagtggattaccacttcatctaagacc 12735560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 22608018 - 22608113
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||| ||||    
T  22608018 aaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtttaatttcaatggattactacttcatctgagac 22608113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 299
Target Start/End: Original strand, 39807877 - 39807963
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttc 299  Q
    |||||||||| || |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39807877 aaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 29581138 - 29581044
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| || |||||  |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29581138 aaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattt-agtggattaccacttcatctaagac 29581044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 12867874 - 12867970
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||  ||||| || ||||||| ||||||||| |||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  12867874 aaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttattttcagtggattaccacttcatctaagacc 12867970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 33770628 - 33770696
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33770628 gggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaagac 33770696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 23710428 - 23710337
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatcta 304  Q
    |||||||||| |||||| || |||||||| |||||||| || |||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  23710428 aaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaatttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 31015027 - 31015110
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||  ||||||||||  | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31015027 cggacatcatgattcgggttcgaattcagaacctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaagac 31015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 32441212 - 32441119
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtga 273  Q
    ||||||||||||| |||||||| ||||||    |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  32441212 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 55400261 - 55400356
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| |||||| |||| ||||||| ||| |||||| |||||| |||||||||| ||||||||| |||||||||||||||||||    
T  55400261 aaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagtttattttcagtggattaccacttcatctaagac 55400356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 307
Target Start/End: Original strand, 12767086 - 12767214
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| | ||||    |||||| |||| ||||| |||||| | ||||||||| |||  ||||||||||||||||||||||||    
T  12767086 tgtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagttta 12767185  T
Q  279 atttcagtggtttaccacttcatctaaga 307  Q
    |||||| ||||||||  ||||||||||||    
T  12767186 atttcactggtttactgcttcatctaaga 12767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 19674059 - 19673929
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    ||||||||||||| | |||||||| | ||||    |||||||||| ||| || |  ||||| ||||||||||||||||||||||| || |||| ||||||    
T  19674059 ttgtctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagttt 19673960  T
Q  278 aatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||| |||||||||||| ||||||    
T  19673959 aatttcagtggattaccacttcatttaagac 19673929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 298
Target Start/End: Original strand, 37134048 - 37134166
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| | |||||| ||||||    ||||| ||||  ||||  |||||| |||||||||||||||  || ||||||||||||||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtttaa 37134147  T
Q  280 tttcagtggtttaccactt 298  Q
    |||||||||||||||||||    
T  37134148 tttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 1966611 - 1966678
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaagac 1966678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 2075538 - 2075633
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||  ||||| ||||||   |||||||||||||||||||||||||| |||||||||||||||||| || |||| ||||| |||||||||    
T  2075538 aaattgcaagggcggacgtcatgatttgggttcgaacccgggacctcacagttatgtgtgagtttaatttcaatgatttatcactttatctaagac 2075633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 2864876 - 2864751
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    |||||||||||||  ||||||| ||||||    |||||||||| | |||| || |||||||||||||||||  | |||||| ||||||||||||| ||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagcttaa 2864777  T
Q  280 tttcagtggtttaccacttcatctaa 305  Q
    |||||  |||||||||||||||||||    
T  2864776 tttcaaaggtttaccacttcatctaa 2864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 19814103 - 19814229
Alignment:
Q  181 ttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt 277  Q
    |||| |||||||| | |||||||| ||||||    |||||| ||| |||||| || ||||| |||||| |||| ||||||||||| || |||||||||||    
T  19814103 ttgtttagaagtcttagctcaactggcaaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagttt 19814202  T
Q  278 aatttcagtggtttaccacttcatcta 304  Q
    ||||||||| | |||||||||||||||    
T  19814203 aatttcagttgattaccacttcatcta 19814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 37620677 - 37620745
Alignment:
Q  240 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||  |||||| | |||||||||||||||||||||| ||||||||||||| |||||    
T  37620677 gggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaagac 37620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 24417973 - 24417878
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |  ||| || ||||||||||||||| ||| |||||||||||||||  |||||||||||| ||||| |||||||||| || |||||    
T  24417973 aaattgcaaggcacgacgtcgtgacccgggttcgaatccgagacctcacagttgtggatgagtttaattttagtggattaccacttcttccaagac 24417878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 19119204 - 19119258
Alignment:
Q  254 gacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  19119204 gacctcacagt-gtgtgtgagtttaatttcagtggtttactactccatctaagacc 19119258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 22910352 - 22910281
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttca 284  Q
    ||||||||||  ||||| || ||||||||||||||||| |||| ||||||||||||| | ||||||||||||    
T  22910352 aaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaatttca 22910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 22968170 - 22968241
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttca 284  Q
    ||||||||||  ||||| || ||||||||||||||||| |||| ||||||||||||| | ||||||||||||    
T  22968170 aaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaatttca 22968241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 23532117 - 23532172
Alignment:
Q  250 ccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||| |||||    
T  23532117 ccgggacttcacagttgtgtgtgagtttaatttcagtgaattaccacttcttctaa 23532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 44369965 - 44369916
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  44369965 tcacagttgtgtgtgagtttaatttcagtggtttaccgc-tcatctaagac 44369916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 50033436 - 50033510
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||  | ||| |||||||||||||| |||||||||||| ||  |||||||||||| ||||||    
T  50033436 tgacccgggttcgaacatgagacatcacagttgtgtgtaagtttaatttcaatgaattaccacttcatataagac 50033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 50347387 - 50347329
Alignment:
Q  250 ccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||| | |||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  50347387 ccgggacattacagatgtgtgtgagtttaatttcagtggattaccacctcatctaagac 50347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 52172043 - 52171989
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| || |||||||    
T  52172043 acctcacaattgtgtgtgagtttaatttcagtggattaccactttatttaagacc 52171989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 52768365 - 52768300
Alignment:
Q  243 ttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||  ||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  52768365 ttcgaaccaaggatctcacagttgtgtgtgagtttaatttcaatggattacca-ttcatctaagacc 52768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 3465755 - 3465842
Alignment:
Q  186 tagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtg 270  Q
    |||||||||| ||||||||||||||||   |||||||||| |||||| |  ||| || ||||||||| |||||||||| |||||||||    
T  3465755 tagaagtcctagctcaactagcaaatatcgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 49030833 - 49030754
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttac 293  Q
    |||||||||| |||||| || ||| ||| ||||||||| || |||||| |||||||||||||||||| |||||||| ||||    
T  49030833 aaattgcaaggccggacgtcgtgatccgagttcgaacc-ggaacctcatagttgtgtgtgagtttaacttcagtggattac 49030754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 48822890 - 48822940
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||||||||||||||||| | | |||||||||||| |||||    
T  48822890 ctcacagttgtgtgtgagtttaatttcaatagattaccacttcatttaaga 48822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 51287676 - 51287730
Alignment:
Q  255 acctcacagttgtgtgtgag-tttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||| |||||||||||||  |||||| ||||||||||||    
T  51287676 acctcacagttgtgtgtgagttttaatttcagtgaattaccatttcatctaagac 51287730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 16555382 - 16555435
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||| |||||||| | ||  |||||||||||||||||||    
T  16555382 acctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaagac 16555435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 24518078 - 24517983
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| |||||||||| |  ||||||| |||||||||||  | |||||| || |||||||||||||||| | ||  ||||||||| |||| ||||    
T  24518078 aaattgtaagaccggacgttgtgacccgtgttcgaacccgaaatctcacaattatgtgtgagtttaattttaatgaattaccacttaatctcagac 24517983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 1125964 - 1126014
Alignment:
Q  257 ctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    ||||||||||||| |||||||||||||| |   ||||||||||||||||||    
T  1125964 ctcacagttgtgtatgagtttaatttcaataaattaccacttcatctaaga 1126014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 2804576 - 2804647
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||||||||||||||  |||||| |  ||| | |||||||||||||| ||||| |||||||||||| |||||    
T  2804576 tgacccgggttcgaacctaggacctta--gttttatgtgagtttaatttaagtggattaccacttcatttaaga 2804647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 50035946 - 50036020
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||  |||||||| | ||| |||||||||||||| |||||||||||| ||  |||| ||||||| ||||||    
T  50035946 tgacccgaattcgaacctgagacttcacagttgtgtgtaagtttaatttcattgaattactacttcatataagac 50036020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 516518 - 516457
Alignment:
Q  246 gaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||| ||| |||||| ||||||||||||||| |||| |||| ||||  ||||||||||||    
T  516518 gaacccaggatctcacaattgtgtgtgagtttattttcggtggattacagcttcatctaaga 516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 2107312 - 2107268
Alignment:
Q  226 ggacatcatgacccgggttcgaacccgggacctcacagttgtgtg 270  Q
    ||||||| | |||||||||| |||||||| |||||||||||||||    
T  2107312 ggacatcttcacccgggttcaaacccgggtcctcacagttgtgtg 2107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 32778157 - 32778238
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttacca 295  Q
    |||||||||||  ||||| || ||| |||||||||||| || ||||||||| |  |||||||||||| ||| ||||| ||||||    
T  32778157 aaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaat--tgtgtgagtttatttttagtggattacca 32778238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 37395699 - 37395731
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtg 287  Q
    ||||||||||||||||||||| |||||||||||    
T  37395699 acctcacagttgtgtgtgagtataatttcagtg 37395731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 41679452 - 41679492
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccactt 298  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  41679452 tcacagttgtgtgtgagtgtaatttcagtgacttaccactt 41679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 14079 - 13950
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| |||||||   |||||||||| |||||| |  ||| |||||||||||||||||||||||||||||||||||||||||     
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 13980  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  13979 tttcagtggattaccacttcatctaagacc 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 19759 - 19630
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| |||||||   |||||||||| |||||| |  ||| |||||||||||||||||||||||||||||||||||||||||     
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 19660  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  19659 tttcagtggattaccacttcatctaagacc 19630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 13203957 - 13204086
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||||     
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttat 13204056  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  13204057 tttcagtggattaccacttcatctaagacc 13204086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 21018223 - 21018352
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||   |||||||| || |||||| |  |||||||||||||||||||||||||||||||||||||||||||||     
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 21018322  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  21018323 tttcagtggattaccacttcatctaagacc 21018352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 31909480 - 31909384
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31909480 aaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 31909384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 1191671 - 1191543
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaataa---aattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| |||||||| |||||| |   ||||||||| |||||| || ||| ||||||||||||||||||||||||| |||||||||||||    
T  1191671 tttgtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtt 1191572  T
Q  277 taatttcagtggtttaccacttcatctaa 305  Q
    |||||||||||| |||| |||||||||||    
T  1191571 taatttcagtggcttacaacttcatctaa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 309
Target Start/End: Complemental strand, 35317826 - 35317696
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||    ||||||||||  ||||| | |||||| ||| |||||||||||||||||||||||||||||||||||    
T  35317826 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagttta 35317727  T
Q  279 atttcagtggtttaccacttcatctaagacc 309  Q
     ||||||||| ||||||||||||||||||||    
T  35317726 ttttcagtggattaccacttcatctaagacc 35317696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 4825066 - 4824938
Alignment:
Q  184 tctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaat 280  Q
    |||||||||||| |||||||| ||||||    |||||||||| |||||| |  |||||| ||||| |||||||||||||||||||||||||||||||| |    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtttatt 4824967  T
Q  281 ttcagtggtttaccacttcatctaagacc 309  Q
    |||| ||| ||||||||||||||||||||    
T  4824966 ttcaatggattaccacttcatctaagacc 4824938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 29265929 - 29266004
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  29265929 tgacccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 29266004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 17984837 - 17984745
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||||||  |||| || |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  17984837 aaattgcaagattggacgtcctgactcgggttcgaacccggaacctcacagttgtgtgtgagtttaattttagtggcttatcacttcatctaa 17984745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 12257356 - 12257485
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||| || ||| |  ||||| |||||||||||| |||||||| | |||||||||||||||     
T  12257356 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagtttat 12257455  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  12257456 tttcagtggattaccacttcatctaagacc 12257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 2971038 - 2971112
Alignment:
Q  234 tgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  2971038 tgacccgggttcgaacctgagacctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaagac 2971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 27721430 - 27721550
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| | ||||    |||||||||   ||||| || ||||||||||| |||||||||||||||||||||| ||||| ||||    
T  27721430 tgtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaattta 27721529  T
Q  279 atttcagtggtttaccacttc 299  Q
    |||||||||| ||||||||||    
T  27721530 atttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 6021024 - 6021117
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    ||||||||||| || ||| |  |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||    
T  6021024 aaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttattttcagtggattaccactttatctaa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 32143474 - 32143413
Alignment:
Q  248 acccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32143474 acccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagacc 32143413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 308
Target Start/End: Original strand, 8734000 - 8734125
Alignment:
Q  187 agaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgag-tttaattt 282  Q
    ||||||||| |||||||| ||||||    |||||||||| |||||| || |||||  ||||||||||||| |||||||||||||  ||||| ||||| ||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaactt 8734099  T
Q  283 cagtggtttaccacttcatctaagac 308  Q
    |||||| |||||||||||||||||||    
T  8734100 cagtggattaccacttcatctaagac 8734125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 9577089 - 9576985
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| || ||| |||||||| |||||||||||| | ||||||||||||| |||||||||||    
T  9577089 gtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtttaa 9576990  T
Q  280 tttca 284  Q
    |||||    
T  9576989 tttca 9576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 11124651 - 11124780
Alignment:
Q  182 tgtctagaagtcctggctcaactagcaaat---aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 278  Q
    |||||||||||||| |||||||| ||||||   ||||||||||| |||||| || |||||  | ||||||||| | |||||| | || | |||| |||||    
T  11124651 tgtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggttta 11124750  T
Q  279 atttcagtggtttaccacttcatctaagac 308  Q
    |||| ||||| |||||||||||||||||||    
T  11124751 atttgagtggattaccacttcatctaagac 11124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 28591445 - 28591350
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||| |||||| |  |||| ||||||| |||| |  ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  28591445 aaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagtttaatgtcagtggtttaccacttcatcttagac 28591350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 40177621 - 40177749
Alignment:
Q  180 tttgtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtt 276  Q
    |||||||||||||||| ||| ||||  |||||    |||||||||| |||||| |  ||||| || ||| ||||||| || |||| ||||||||||||||    
T  40177621 tttgtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtt 40177720  T
Q  277 taatttcagtggtttaccacttcatctaa 305  Q
    || ||||||||| ||||||||||||||||    
T  40177721 tattttcagtggattaccacttcatctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 21112110 - 21112178
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    |||||||||| ||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  21112110 ggttcgaacctgggacctcaaagttgtgtttgagtttattttcagtggattaccacatcatctaagacc 21112178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 35545966 - 35546061
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||| |||| || || ||| |||  |||||||| |||||||||||||||| |||| ||||||||| ||||| ||| |||||||||||||||    
T  35545966 aaattgcaaaaccgaacgtcgtgatccgaattcgaacctgggacctcacagttgtatgtgggtttaatttaagtggattatcacttcatctaagac 35546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 23262606 - 23262672
Alignment:
Q  242 gttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||||||  | |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  23262606 gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 23262672  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 2786338 - 2786398
Alignment:
Q  247 aacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||| |||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  2786338 aacctgggacctcacagttgtgtatgagtttaa-ttcagtggattaccacttcatctaagac 2786398  T

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Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 4925673 - 4925714
Alignment:
Q  267 tgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  4925673 tgtgtaagtttaatttcagtggtttaccacttcatctaagac 4925714  T

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Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 3386946 - 3386894
Alignment:
Q  255 acctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 307  Q
    |||||| |||||||||||| |||||||||||||| |||||||||| |||||||    
T  3386946 acctcaaagttgtgtgtgaatttaatttcagtggattaccacttcttctaaga 3386894  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 19181789 - 19181838
Alignment:
Q  258 tcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  19181789 tcacagttgtgtgtgagtttaatttcagtggatta-cacttcatttaagac 19181838  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 17465147 - 17465205
Alignment:
Q  248 acccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||||| || |||   |||||||||||||||| |||||||||||||||||||    
T  17465147 acccgggacctcacaattttgta--agtttaatttcagtggattaccacttcatctaagac 17465205  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 41580142 - 41580078
Alignment:
Q  241 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaa 305  Q
    |||||||| |||  |||||||||||||||||  ||||||||| | ||| ||||||||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa 41580078  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 14270569 - 14270652
Alignment:
Q  225 cggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||| || |||||||  ||| |||||| || |||| |||||||| | |||||| ||||||||| ||| |||||||||||||||    
T  14270569 cggacgtcgtgacccgtattccaacccgagatctcatagttgtgtttaagtttattttcagtggattatcacttcatctaagac 14270652  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 28423298 - 28423241
Alignment:
Q  252 gggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||||| |||||||||||||| |||||| |   |||||| |||||||||||||    
T  28423298 gggacctcacaattgtgtgtgagttttatttcactatattaccatttcatctaagacc 28423241  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 3049150 - 3049094
Alignment:
Q  212 aaaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtg 268  Q
    ||||||||||| ||||||  | |||||||  ||| ||||||||||||||||||||||    
T  3049150 aaaattgcaaggccggacgccgtgacccgatttcaaacccgggacctcacagttgtg 3049094  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 30127894 - 30127960
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcg 246  Q
    ||||||||||||| |||||||| | ||||    |||||||||| ||||||||| |||||||||||||    
T  30127894 gtctagaagtcctagctcaacttgtaaatgccgaaattgcaaggccggacatcgtgacccgggttcg 30127960  T

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Target: scaffold0038 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 114252 - 114380
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||| ||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||||||     
T  114252 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttag 114351  T
Q  280 tttcagtggtttaccacttcatctaagac 308  Q
    |||||||||||||||||||||||||||||    
T  114352 tttcagtggtttaccacttcatctaagac 114380  T

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Target: scaffold0044 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Complemental strand, 10101 - 9972
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    |||||||||| |||||| || | ||||||||||||||||||||||||| |||||||||||||||||     
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttat 10002  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  10001 tttcagtggattaccacttcatctaagacc 9972  T

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Target: scaffold0032 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 56481 - 56610
Alignment:
Q  183 gtctagaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 279  Q
    ||||||||||||| |||||||| ||||||    ||||||||||  ||||| |  |||||||||||||||||||||||||||||||||||||||||||||     
T  56481 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 56580  T
Q  280 tttcagtggtttaccacttcatctaagacc 309  Q
    ||||||||| ||||||||||||||||||||    
T  56581 tttcagtggattaccacttcatctaagacc 56610  T

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Target: scaffold0053 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 22196 - 22291
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    |||||| ||| |||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  22196 aaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggattaccacttcatctaagac 22291  T

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Target: scaffold0352 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 9012 - 8943
Alignment:
Q  239 cgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaagac 308  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9012 cgggttcgaacctaggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcatctaagac 8943  T

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Target: scaffold0067 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 34822 - 34948
Alignment:
Q  187 agaagtcctggctcaactagcaaata---aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttt-aattt 282  Q
    ||||||||| |||||||| ||||||    |||||||||| |||||| || ||||  ||||||||| || ||||||| ||||||| ||||||||| |||||    
T  34822 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagttttaattt 34921  T
Q  283 cagtggtttaccacttcatctaagacc 309  Q
    |||||| ||||||||||||||||||||    
T  34922 cagtggattaccacttcatctaagacc 34948  T

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Target: scaffold0360 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 307
Target Start/End: Original strand, 14528 - 14632
Alignment:
Q  213 aaattgcaagaccggacatcatgacccgggttcgaacccgggacctcacag----------ttgtgtgtgagtttaatttcagtggtttaccacttcatc 302  Q
    |||||||||| |||||| || ||| ||||||||||||||||||||||||||           |||||||||||||||||||||||| ||||||||| |||    
T  14528 aaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagagtcacagatgtgtgtgtgagtttaatttcagtggattaccacttaatc 14627  T
Q  303 taaga 307  Q
    |||||    
T  14628 taaga 14632  T

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Target: scaffold0360; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 14726 - 14776
Alignment:
Q  239 cgggttcgaacccgggacctcacagttgtgtg--tgagtttaatttcagtg 287  Q
    ||||||||||||||| |||||||| |||||||  |||||||||||||||||    
T  14726 cgggttcgaacccggaacctcacaattgtgtgtctgagtttaatttcagtg 14776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 15213 - 15141
Alignment:
Q  229 catcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcat 301  Q
    ||||||||| ||  ||| |||| |||| |||||||||  |||| |||||||||||||||| ||||||||||||    
T  15213 catcatgactcgaattcaaaccggggatctcacagttacgtgtaagtttaatttcagtggcttaccacttcat 15141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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