View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1643_low_85 (Length: 301)

Name: NF1643_low_85
Description: NF1643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1643_low_85
NF1643_low_85
[»] chr1 (48 HSPs)
chr1 (157-225)||(39872863-39872931)
chr1 (18-80)||(39873066-39873128)
chr1 (236-300)||(47682335-47682399)
chr1 (239-301)||(2960022-2960084)
chr1 (236-301)||(23999618-23999684)
chr1 (239-301)||(27227325-27227387)
chr1 (240-301)||(11742208-11742269)
chr1 (236-301)||(15383204-15383269)
chr1 (240-301)||(25160907-25160968)
chr1 (240-301)||(27532821-27532882)
chr1 (236-301)||(39393655-39393720)
chr1 (240-301)||(51129134-51129195)
chr1 (233-301)||(38823482-38823550)
chr1 (239-301)||(27763150-27763213)
chr1 (239-301)||(10923001-10923063)
chr1 (240-301)||(19899608-19899670)
chr1 (239-301)||(37451559-37451621)
chr1 (236-301)||(46931680-46931746)
chr1 (240-301)||(1547546-1547607)
chr1 (236-301)||(3309424-3309489)
chr1 (240-301)||(16415921-16415982)
chr1 (240-301)||(32216330-32216391)
chr1 (236-301)||(32267305-32267370)
chr1 (248-301)||(34012222-34012275)
chr1 (233-301)||(238353-238421)
chr1 (233-301)||(28564623-28564691)
chr1 (233-301)||(30254691-30254759)
chr1 (233-301)||(30326792-30326860)
chr1 (236-295)||(3535194-3535253)
chr1 (240-301)||(8222403-8222463)
chr1 (240-295)||(14758307-14758362)
chr1 (240-301)||(27563745-27563806)
chr1 (239-301)||(48353816-48353878)
chr1 (240-301)||(4330556-4330617)
chr1 (236-301)||(9902894-9902959)
chr1 (233-301)||(37618741-37618809)
chr1 (240-295)||(18422926-18422981)
chr1 (246-301)||(21289881-21289936)
chr1 (239-301)||(27267040-27267102)
chr1 (239-301)||(47279463-47279525)
chr1 (236-301)||(1359775-1359840)
chr1 (248-301)||(15168379-15168432)
chr1 (240-301)||(22170986-22171047)
chr1 (236-293)||(28769924-28769981)
chr1 (164-213)||(39881521-39881570)
chr1 (240-293)||(40885088-40885141)
chr1 (240-301)||(42721311-42721372)
chr1 (233-301)||(15752297-15752365)
[»] chr8 (32 HSPs)
chr8 (236-301)||(16446726-16446791)
chr8 (233-301)||(466103-466171)
chr8 (236-301)||(1149483-1149548)
chr8 (236-301)||(23854282-23854347)
chr8 (236-300)||(30654434-30654499)
chr8 (240-301)||(38644256-38644317)
chr8 (240-301)||(43643446-43643507)
chr8 (240-301)||(1149771-1149832)
chr8 (236-301)||(1205201-1205266)
chr8 (236-301)||(1953839-1953904)
chr8 (236-293)||(4132545-4132602)
chr8 (240-301)||(5299797-5299858)
chr8 (240-301)||(6098364-6098425)
chr8 (240-301)||(11727302-11727363)
chr8 (240-301)||(16223141-16223202)
chr8 (240-301)||(24823245-24823306)
chr8 (240-301)||(33906490-33906551)
chr8 (248-301)||(34895248-34895301)
chr8 (236-301)||(37970370-37970435)
chr8 (236-300)||(12587856-12587920)
chr8 (252-301)||(7890808-7890857)
chr8 (240-300)||(8803668-8803729)
chr8 (246-299)||(44869781-44869834)
chr8 (250-301)||(35859222-35859273)
chr8 (236-292)||(10555062-10555120)
chr8 (239-301)||(35459562-35459624)
chr8 (236-301)||(9864422-9864487)
chr8 (240-301)||(27082689-27082750)
chr8 (240-301)||(34951908-34951969)
chr8 (240-301)||(36694817-36694878)
chr8 (240-293)||(39098978-39099031)
chr8 (240-301)||(40862697-40862758)
[»] chr7 (34 HSPs)
chr7 (236-301)||(18797577-18797642)
chr7 (236-301)||(27283994-27284059)
chr7 (236-301)||(30055777-30055842)
chr7 (236-301)||(7335043-7335108)
chr7 (240-301)||(10359060-10359121)
chr7 (240-301)||(37110128-37110189)
chr7 (233-301)||(11071450-11071518)
chr7 (233-301)||(26587938-26588006)
chr7 (233-301)||(31578910-31578978)
chr7 (239-301)||(12165996-12166058)
chr7 (236-301)||(24211991-24212057)
chr7 (239-301)||(29173775-29173837)
chr7 (240-301)||(17842430-17842491)
chr7 (240-301)||(22687485-22687546)
chr7 (246-301)||(35353368-35353423)
chr7 (239-301)||(44411386-44411448)
chr7 (239-301)||(37703344-37703406)
chr7 (239-301)||(37704435-37704497)
chr7 (240-301)||(5657327-5657388)
chr7 (236-301)||(6546769-6546834)
chr7 (240-301)||(9355672-9355733)
chr7 (236-301)||(15612605-15612670)
chr7 (239-300)||(31520588-31520649)
chr7 (240-301)||(46480975-46481036)
chr7 (240-300)||(12390496-12390556)
chr7 (241-300)||(10481860-10481919)
chr7 (240-295)||(48928149-48928204)
chr7 (240-301)||(23111446-23111507)
chr7 (240-301)||(8861539-8861600)
chr7 (236-289)||(15672617-15672670)
chr7 (252-301)||(25691390-25691439)
chr7 (239-300)||(37347274-37347335)
chr7 (240-292)||(33688117-33688169)
chr7 (233-300)||(44598913-44598978)
[»] chr6 (12 HSPs)
chr6 (236-301)||(6091026-6091091)
chr6 (236-301)||(5627666-5627732)
chr6 (240-301)||(3879783-3879844)
chr6 (240-301)||(20768361-20768422)
chr6 (240-301)||(33892856-33892917)
chr6 (246-301)||(4318666-4318721)
chr6 (239-301)||(7054616-7054679)
chr6 (236-295)||(6089178-6089237)
chr6 (240-295)||(7234885-7234940)
chr6 (240-301)||(1946113-1946175)
chr6 (240-293)||(33619109-33619162)
chr6 (249-301)||(21016962-21017014)
[»] chr5 (43 HSPs)
chr5 (236-301)||(25889645-25889710)
chr5 (236-301)||(31786481-31786546)
chr5 (236-300)||(1428998-1429062)
chr5 (236-301)||(2888280-2888345)
chr5 (240-301)||(5830171-5830232)
chr5 (236-301)||(13956197-13956262)
chr5 (236-301)||(22255457-22255522)
chr5 (240-301)||(22973917-22973978)
chr5 (240-301)||(33908512-33908572)
chr5 (240-301)||(38528072-38528133)
chr5 (240-301)||(39573090-39573151)
chr5 (236-300)||(15992376-15992440)
chr5 (240-300)||(27330583-27330643)
chr5 (246-301)||(31705447-31705502)
chr5 (239-300)||(699428-699489)
chr5 (236-301)||(8437240-8437305)
chr5 (240-301)||(24886366-24886427)
chr5 (248-301)||(35511317-35511370)
chr5 (240-301)||(35826321-35826382)
chr5 (236-301)||(43308495-43308560)
chr5 (233-301)||(7693493-7693561)
chr5 (249-301)||(9200512-9200564)
chr5 (233-301)||(12910627-12910695)
chr5 (233-301)||(22019895-22019963)
chr5 (246-301)||(17157866-17157921)
chr5 (236-301)||(5837830-5837895)
chr5 (240-301)||(8467005-8467066)
chr5 (240-301)||(14409176-14409237)
chr5 (240-301)||(22981072-22981133)
chr5 (252-301)||(25669867-25669916)
chr5 (240-301)||(35504644-35504705)
chr5 (236-301)||(35934171-35934236)
chr5 (240-301)||(36860703-36860764)
chr5 (240-301)||(42343000-42343061)
chr5 (249-297)||(19120147-19120195)
chr5 (236-300)||(25500762-25500826)
chr5 (248-301)||(7208699-7208752)
chr5 (240-301)||(8741720-8741781)
chr5 (236-301)||(26269084-26269149)
chr5 (246-295)||(28416392-28416441)
chr5 (240-301)||(40133664-40133725)
chr5 (236-268)||(23116090-23116122)
chr5 (240-296)||(32563419-32563475)
[»] chr4 (38 HSPs)
chr4 (236-301)||(19089324-19089389)
chr4 (236-301)||(37663612-37663677)
chr4 (236-301)||(32912450-32912516)
chr4 (236-301)||(1815576-1815641)
chr4 (240-301)||(19440519-19440580)
chr4 (240-301)||(25184392-25184453)
chr4 (236-301)||(46888029-46888094)
chr4 (240-300)||(29584072-29584132)
chr4 (236-301)||(34361362-34361428)
chr4 (236-301)||(879419-879484)
chr4 (236-301)||(7703784-7703849)
chr4 (236-301)||(23431830-23431895)
chr4 (236-301)||(23761346-23761411)
chr4 (240-301)||(33341677-33341738)
chr4 (240-301)||(35025437-35025498)
chr4 (240-301)||(37775937-37775998)
chr4 (240-301)||(49376246-49376307)
chr4 (236-301)||(50697517-50697582)
chr4 (240-301)||(50764999-50765060)
chr4 (233-301)||(4598254-4598322)
chr4 (240-300)||(17272243-17272303)
chr4 (233-301)||(34947966-34948034)
chr4 (249-301)||(47254028-47254080)
chr4 (249-300)||(30002513-30002564)
chr4 (251-301)||(46883985-46884035)
chr4 (246-300)||(55477763-55477817)
chr4 (248-301)||(6864322-6864375)
chr4 (236-301)||(7152075-7152140)
chr4 (240-301)||(9139508-9139569)
chr4 (240-301)||(32579725-32579786)
chr4 (236-301)||(32592359-32592424)
chr4 (240-301)||(33816387-33816448)
chr4 (240-301)||(37288007-37288068)
chr4 (248-301)||(39400295-39400348)
chr4 (240-301)||(55240976-55241037)
chr4 (240-301)||(42200009-42200071)
chr4 (240-301)||(3042898-3042959)
chr4 (236-293)||(27396891-27396948)
[»] chr3 (40 HSPs)
chr3 (240-301)||(38591968-38592029)
chr3 (236-301)||(42505920-42505985)
chr3 (240-301)||(54828546-54828607)
chr3 (240-301)||(4015729-4015790)
chr3 (240-301)||(11357226-11357287)
chr3 (240-301)||(22622563-22622624)
chr3 (240-301)||(26941105-26941166)
chr3 (236-301)||(44186362-44186427)
chr3 (241-301)||(14586525-14586585)
chr3 (236-301)||(21009646-21009712)
chr3 (239-301)||(39282921-39282983)
chr3 (240-301)||(46297607-46297668)
chr3 (236-301)||(46994506-46994571)
chr3 (236-293)||(51212624-51212681)
chr3 (249-301)||(40936252-40936304)
chr3 (233-301)||(50475074-50475142)
chr3 (242-301)||(1089965-1090024)
chr3 (240-301)||(2008202-2008263)
chr3 (236-301)||(33698419-33698484)
chr3 (248-301)||(47481800-47481854)
chr3 (240-301)||(7327327-7327388)
chr3 (248-301)||(21193885-21193938)
chr3 (240-301)||(22451238-22451299)
chr3 (240-301)||(24707960-24708021)
chr3 (236-301)||(29099612-29099677)
chr3 (240-301)||(32373740-32373801)
chr3 (240-301)||(40552104-40552165)
chr3 (249-301)||(44891776-44891828)
chr3 (239-299)||(48355210-48355270)
chr3 (233-301)||(53228997-53229065)
chr3 (246-301)||(54506083-54506139)
chr3 (246-301)||(3362531-3362586)
chr3 (246-301)||(36012415-36012470)
chr3 (246-301)||(3655045-3655102)
chr3 (236-294)||(25580005-25580063)
chr3 (240-301)||(43975737-43975798)
chr3 (236-301)||(22445910-22445975)
chr3 (248-301)||(33378630-33378683)
chr3 (236-269)||(34133201-34133234)
chr3 (240-301)||(52040767-52040828)
[»] chr2 (24 HSPs)
chr2 (236-301)||(2325241-2325306)
chr2 (233-301)||(41961112-41961180)
chr2 (236-301)||(11366243-11366309)
chr2 (240-301)||(33709095-33709156)
chr2 (233-296)||(19289191-19289254)
chr2 (246-301)||(26357862-26357917)
chr2 (246-301)||(35959177-35959232)
chr2 (239-301)||(27349811-27349873)
chr2 (236-301)||(4763906-4763971)
chr2 (240-301)||(7006801-7006862)
chr2 (236-301)||(19424505-19424570)
chr2 (248-301)||(19500778-19500831)
chr2 (241-301)||(4478645-4478705)
chr2 (249-300)||(19314135-19314186)
chr2 (250-301)||(33660240-33660291)
chr2 (240-301)||(5881808-5881869)
chr2 (236-301)||(13711734-13711799)
chr2 (240-301)||(18494144-18494205)
chr2 (240-301)||(41465780-41465841)
chr2 (240-301)||(43648108-43648169)
chr2 (249-301)||(31570597-31570649)
chr2 (240-300)||(37905989-37906049)
chr2 (240-301)||(4167201-4167262)
chr2 (249-301)||(18257401-18257453)
[»] scaffold0291 (1 HSPs)
scaffold0291 (240-301)||(8166-8227)
[»] scaffold0002 (3 HSPs)
scaffold0002 (240-301)||(408274-408335)
scaffold0002 (240-301)||(93945-94006)
scaffold0002 (246-301)||(413-468)
[»] scaffold0022 (1 HSPs)
scaffold0022 (239-300)||(145861-145923)
[»] scaffold0318 (1 HSPs)
scaffold0318 (240-301)||(12188-12249)
[»] scaffold0061 (1 HSPs)
scaffold0061 (240-301)||(44235-44296)
[»] scaffold0017 (1 HSPs)
scaffold0017 (240-301)||(154491-154552)
[»] scaffold0009 (1 HSPs)
scaffold0009 (240-301)||(100994-101053)


Alignment Details
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39872931 - 39872863
Alignment:
Q  157 actaataaataaatagtactaaaaataagaaattatgtgtctgaaatgtgtgatgaatcattgcttgtt 225  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39872931 actaataaataaatagtactaaaaataagaaattctgtgtctgaaatgtgtgatgaatcattgcttgtt 39872863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 39873128 - 39873066
Alignment:
Q  18 gttgagacatagcagctttgtggtcactggtcacctatcttcctatgtaaatgatccatggtt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39873128 gttgagacatagcagctttgtggtcactggtcacctatcttcctatgtaaatgatccatggtt 39873066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 47682399 - 47682335
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||    
T  47682399 tacctgtaaatccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaat 47682335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 2960022 - 2960084
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  2960022 ctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 2960084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 23999618 - 23999684
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  23999618 tacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 23999684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 27227387 - 27227325
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  27227387 ctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 27227325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 11742269 - 11742208
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  11742269 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 11742208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 15383204 - 15383269
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||||||||||||| || | | ||||||||| ||||||||| ||||    
T  15383204 tacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatc 15383269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 25160907 - 25160968
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  25160907 tgtaagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatc 25160968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 27532882 - 27532821
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  27532882 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 27532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 39393655 - 39393720
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||||||||||||||||||| |||||||| || | | ||||||||||||||||||||||||    
T  39393655 taccggtaaatccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatc 39393720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 51129134 - 51129195
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  51129134 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 51129195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 38823482 - 38823550
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| || || |||||||||||||||||| || | | ||||||||||||||||||||||||    
T  38823482 taatacctgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 38823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 27763213 - 27763150
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataatta-actattgatcattaatcagtaatc 301  Q
    |||||| | |||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  27763213 ctgtaagttcaagatgttgcaagcattactagataaatatactattgatcattaatcagtaatc 27763150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 10923001 - 10923063
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||| || | | ||||||||||||||||||||||||    
T  10923001 ctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 10923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 19899670 - 19899608
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  19899670 tgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 19899608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 37451559 - 37451621
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||||||||    
T  37451559 ctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatc 37451621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 46931680 - 46931746
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || |||  | ||||||||||||||||||||||    
T  46931680 tacctgtaagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatc 46931746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 1547546 - 1547607
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | || |||||||||||||||||||||    
T  1547546 tgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatc 1547607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 3309424 - 3309489
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||| |||||||| ||||||||||||||| || | | ||||||||||||||||||||||||    
T  3309424 tacccgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatc 3309489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 16415921 - 16415982
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||| || || | | ||||||||||||||||||||||||    
T  16415921 tgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatc 16415982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 32216330 - 32216391
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||| || || | | ||||||||||||||||||||||||    
T  32216330 tgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatc 32216391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 32267305 - 32267370
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||  |||||||||||||||||||||||| || | | |||||||| |||||||||||||||    
T  32267305 tacctgtaggtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatc 32267370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 34012275 - 34012222
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  34012275 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatc 34012222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 238421 - 238353
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||| |||||||||||||||||||||||| || | | |||||| ||||| |||||||||||    
T  238421 taatatctgtaagtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatc 238353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 28564691 - 28564623
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| ||||||||||||||| |||||||| || | | |||||||||||||||||| |||||    
T  28564691 taatacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatc 28564623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 30254691 - 30254759
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || | | ||||||||| |||||||| |||||    
T  30254691 taatacatgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcaataatc 30254759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 30326860 - 30326792
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| | ||| |||||||||||||||||||||||| || | | |||||||||||| |||||||||||    
T  30326860 taatacatttaagtccaagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatc 30326792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 3535194 - 3535253
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    ||||| ||| |||||||||||||||||||||||| || | | ||||||||||||||||||    
T  3535194 tacctttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatca 3535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8222403 - 8222463
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || |||||  ||||||||||||||||||||||    
T  8222403 tgtaagtccaagatgttgcaagcattactagatgaatta--tattgatcattaatcagtaatc 8222463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 14758307 - 14758362
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||    
T  14758307 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatca 14758362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 27563806 - 27563745
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||    
T  27563806 tgtaagtccaagatgttgcaagtattactagatgaattaa-tattgatcattaatcagtaatc 27563745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 48353816 - 48353878
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||| ||||||||||||||| || | | | ||||||||||||||||||||||    
T  48353816 ctgtaagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatc 48353878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 4330556 - 4330617
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||| |||||||||||||||||| || | | || |||||||||||||||||||||    
T  4330556 tgtaagtccaatatgttgcaagcattactagatgaattacaattgatcattaatcagtaatc 4330617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 9902959 - 9902894
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||| ||||||||| |||||||| ||||| || | | ||||||||||||||||||||||||    
T  9902959 taccagtaagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatc 9902894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 37618809 - 37618741
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || | | | |||||| ||||||||| |||||    
T  37618809 taatacatgtaagtccaagatgttgcaagcattactagatgaattagtattgaccattaatcaataatc 37618741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 18422926 - 18422981
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    ||||| |||||||||||||||||||| ||| || | | ||||||||||||||||||    
T  18422926 tgtaagtccaagatgttgcaagcattgctagatgaattactattgatcattaatca 18422981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 21289881 - 21289936
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||| |||||||| || | | | ||||||||||||||||||||||    
T  21289881 tccaagatgttgcaaacattactagatgaattattattgatcattaatcagtaatc 21289936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 27267102 - 27267040
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| || ||||||||||||||||||||| || | | ||||||||| |||||||| |||||    
T  27267102 ctgtaagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatc 27267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 47279463 - 47279525
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||||||||||||| ||||| || || | | |||||||||||||||| |||||||    
T  47279463 ctgtaagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatc 47279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 1359840 - 1359775
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| | ||| |||||||||||||||||  || | | ||||| ||||||||||||||||||    
T  1359840 tacctgtaagttcaaaatgttgcaagcattactggatgaattactatcgatcattaatcagtaatc 1359775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 15168379 - 15168432
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||| || || | | ||||||||||||||||||| ||||    
T  15168379 caagatgttgcaagcattattagatgaattactattgatcattaatcagcaatc 15168432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 22170986 - 22171047
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || |||||||||||| ||||| || |||| | |||||||||||||||| |||||||    
T  22170986 tgtaagtctaagatgttgcaaacattattagataaattactattgatcattaattagtaatc 22171047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 28769924 - 28769981
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||||||| ||||||||||||||| |||| ||| || | | ||||||||||||||||    
T  28769924 tacctgtaagtccaagatgttgcaaacattgctagatgaattactattgatcattaat 28769981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 39881570 - 39881521
Alignment:
Q  164 aataaatagtactaaaaataagaaattatgtgtctgaaatgtgtgatgaa 213  Q
    ||||||| || ||||||||| |||||||||||| ||||||||| ||||||    
T  39881570 aataaatggtgctaaaaatatgaaattatgtgtttgaaatgtgagatgaa 39881521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 40885088 - 40885141
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||    
T  40885088 tgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaat 40885141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 42721311 - 42721372
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||  ||||||| || | | |||||||||||||||| |||||||    
T  42721311 tgtaagtccaagatgttgcaattattactagattaattactattgatcattaatgagtaatc 42721372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 15752297 - 15752365
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| ||||||| |||||||   |||||| || | | ||||||||||||||||||||||||    
T  15752297 taatacatgtaagtccaagaagttgcaatttttactagatgaattactattgatcattaatcagtaatc 15752365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 16446791 - 16446726
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  16446791 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 16446726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 466103 - 466171
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  466103 taatacctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 466171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 1149548 - 1149483
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||| ||||||    
T  1149548 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatc 1149483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 23854347 - 23854282
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  23854347 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatc 23854282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 30654499 - 30654434
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaat 300  Q
    ||||||||| ||||||||||||||||||||||||||| |||  | |||||||||||||||||||||    
T  30654499 tacctgtaagtccaagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaat 30654434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 38644256 - 38644317
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  38644256 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 38644317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 43643507 - 43643446
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  43643507 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 43643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 1149832 - 1149771
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  1149832 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 1149771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 1205201 - 1205266
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||| ||||||| || | | |||||||||||||||||| |||||    
T  1205201 tacctgtaagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatc 1205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 1953904 - 1953839
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||| |||||||||||| || || | | |||||||||||||||||| |||||    
T  1953904 tacctgtaaatccaagattttgcaagcattattagatgaattactattgatcattaatcaataatc 1953839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 4132602 - 4132545
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||    
T  4132602 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 4132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 5299858 - 5299797
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||||| |||||||||||||||||    
T  5299858 tgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatc 5299797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 6098425 - 6098364
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||||||| |||||||    
T  6098425 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatc 6098364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 11727302 - 11727363
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  11727302 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 11727363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 16223141 - 16223202
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  16223141 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 16223202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 24823306 - 24823245
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||| ||||||||||||||||    
T  24823306 tgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatc 24823245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 33906490 - 33906551
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  33906490 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatc 33906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 34895248 - 34895301
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  34895248 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatc 34895301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 37970435 - 37970370
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||| ||||||||||||||| ||||    
T  37970435 tacctgtaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatc 37970370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 12587856 - 12587920
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||| || ||||| ||||||||||||||| || | | |||||||||||||||||||||||    
T  12587856 tacctgtaagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaat 12587920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 7890857 - 7890808
Alignment:
Q  252 atgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||| || | | ||||||||||||||||||||||||    
T  7890857 atgttgcaagcattactagatgaattactattgatcattaatcagtaatc 7890808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 8803729 - 8803668
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaat 300  Q
    ||||| |||||||||||||||||||||| | || |||  |||||||||||||||||||||||    
T  8803729 tgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaat 8803668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 44869781 - 44869834
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaa 299  Q
    |||||||| ||||||||||||||| || | | ||||||||||||||||||||||    
T  44869781 tccaagatattgcaagcattactagatgaattactattgatcattaatcagtaa 44869834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 35859222 - 35859273
Alignment:
Q  250 agatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  35859222 agatgttgcaagcattactagatgaattaa-tattgatcattaatcagtaatc 35859273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 10555120 - 10555062
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aatta-actattgatcattaa 292  Q
    ||||||||| |||||||| ||||||||||||||| || ||||| |||||||||||||||    
T  10555120 tacctgtaagtccaagatattgcaagcattactagatgaattacactattgatcattaa 10555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 35459624 - 35459562
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| ||||||||| |||||||| || | | ||||||||||||||||||| ||||    
T  35459624 ctgtaagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatc 35459562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 9864422 - 9864487
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| | |||||||||||||||||||||| || | |||||| | ||||| |||| ||||||    
T  9864422 tacctgtaagttcaagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatc 9864487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 27082750 - 27082689
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||| | ||||||||||| |||||    
T  27082750 tgtaagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatc 27082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 34951969 - 34951908
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || |||||||||||||  |||||| || | | ||||||||||||||||||||||||    
T  34951969 tgtaagtctaagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatc 34951908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 36694878 - 36694817
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||||||| |||| || | | |||||| ||||| ||| |||||||    
T  36694878 tgtaaatccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatc 36694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 39099031 - 39098978
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||| ||||| |||||||||||||||||| || | | ||||||||||||||||    
T  39099031 tgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaat 39098978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 40862697 - 40862758
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||  |||| |||||||||||    
T  40862697 tgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatc 40862758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 18797577 - 18797642
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  18797577 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 18797642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 27283994 - 27284059
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  27283994 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 27284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 30055777 - 30055842
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  30055777 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 30055842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 7335043 - 7335108
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||||||||||||| || | | |||||| |||||||||||| ||||    
T  7335043 tacctgtaaatccaagatgttgcaagcattactagatgaattactattaatcattaatcagaaatc 7335108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 10359121 - 10359060
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||    
T  10359121 tgtaagtccaagattttgcaagcattactaaatgatttactattgatcattaatcaataatc 10359060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 37110128 - 37110189
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  37110128 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 37110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 11071450 - 11071518
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| ||||||||||||||| |||||||| || | | |||||||||||||||||| |||||    
T  11071450 taatacctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatc 11071518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 26588006 - 26587938
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||| ||||||||| || | | ||||||||||||||||||||||||    
T  26588006 taatacatgtaagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatc 26587938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 31578978 - 31578910
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  31578978 taatacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatc 31578910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 12165996 - 12166058
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  12165996 ctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 12166058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 24211991 - 24212057
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  24211991 tacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 24212057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 29173775 - 29173837
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||||||||||||||||||| || | | |||||||||||| |||||||||||    
T  29173775 ctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatc 29173837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 17842491 - 17842430
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||| || || | | ||||||||||||||||||||||||    
T  17842491 tgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatc 17842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 22687485 - 22687546
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||| || || | | ||||||||||||||||||||||||    
T  22687485 tgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatc 22687546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 35353368 - 35353423
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  35353368 tccaagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatc 35353423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 44411448 - 44411386
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||    
T  44411448 ctgtaagtccaagatgttgcaagcattactagatgaattaa-tattgaccattaatcagtaatc 44411386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 37703406 - 37703344
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||||||||||||| |||||||| || | | |||||||||||||||||| |||||    
T  37703406 ctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatc 37703344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 37704435 - 37704497
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| |||||||||||||||||||||| | || | | |||||||||||||||| |||||||    
T  37704435 ctgtaagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatc 37704497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 5657388 - 5657327
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | |||||||||||||||| |||||||    
T  5657388 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatc 5657327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 6546769 - 6546834
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||||  ||||||||||||| || | | ||||||||||||||||||||||||    
T  6546769 tacctgtaagtctaagatgaggcaagcattactagatgaattactattgatcattaatcagtaatc 6546834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 9355733 - 9355672
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | |  ||||||||||||||||| |||||    
T  9355733 tgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatc 9355672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 15612670 - 15612605
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||||||||||||||||||| || | | | | ||||||||||||||||||||    
T  15612670 tacctgtaagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatc 15612605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 31520649 - 31520588
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||||| |||||||||||||||||||||||  || | | ||||||||||||||||| |||||    
T  31520649 ctgtaagtccaagatgttgcaagcattactcgatgaattactattgatcattaatccgtaat 31520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 46481036 - 46480975
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || |||||||||||| |||||||| || | | ||||||||||||||||||||||||    
T  46481036 tgtaagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatc 46480975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 12390556 - 12390496
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||| ||||||||||||||| |||||||| || | | |||||| ||||||||||||||||    
T  12390556 tgtaagtccaagatgttgcaaccattactagatgaattactatttatcattaatcagtaat 12390496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 10481860 - 10481919
Alignment:
Q  241 gtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||| |||||||||||||||| ||||||| || | | |||||||||| ||||||||||||    
T  10481860 gtaagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaat 10481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 48928204 - 48928149
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||    
T  48928204 tgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatca 48928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 23111446 - 23111507
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattacta-aataattaactattgatcattaatcagtaatc 301  Q
    |||||||| ||||||||| ||||||||||| || |||| |||||||||||| |||||||||||    
T  23111446 tgtaaatcaaagatgttgaaagcattactagaagaatt-actattgatcataaatcagtaatc 23111507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8861539 - 8861600
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||| ||||||||| || |   ||||||||||||||||||||||||    
T  8861539 tgtaagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatc 8861600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 15672670 - 15672617
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcat 289  Q
    ||||||||| ||||| |||||||||||||||||| || | | ||||||||||||    
T  15672670 tacctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcat 15672617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 25691439 - 25691390
Alignment:
Q  252 atgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||| || | | ||||||||||||||||||||||||    
T  25691439 atgttgcaaacattactagatgaattactattgatcattaatcagtaatc 25691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 37347274 - 37347335
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||||| |||||||| ||||||||||||||  || | | ||||||||||||||||| |||||    
T  37347274 ctgtaagtccaagatattgcaagcattactcgatgaattactattgatcattaatccgtaat 37347335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 33688169 - 33688117
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaa 292  Q
    ||||| |||||||||||||||||||||||| || | |  ||||||||||||||    
T  33688169 tgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 44598913 - 44598978
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||||| ||||| || |||||||| |||||||||||| || |  ||||||||||||||||||| ||||    
T  44598913 taatacatgtaagtctaagatgttacaagcattactagatga--aactattgatcattaatcaataat 44598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 6091091 - 6091026
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  6091091 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 6091026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 5627666 - 5627732
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| ||||||||||||||||||||||||  | |||  ||||||||||||||||||||||||    
T  5627666 tacctgtaagtccaagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatc 5627732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 3879844 - 3879783
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||| |||||||||||    
T  3879844 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatc 3879783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 20768361 - 20768422
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||| ||||||||||||||||| || | | ||||||||||||||||||||||||    
T  20768361 tgtaagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatc 20768422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 33892917 - 33892856
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| ||||||||||| | | |||||||||||||||||| |||||    
T  33892917 tgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatc 33892856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 4318721 - 4318666
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  4318721 tccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatc 4318666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 7054679 - 7054616
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||||||||||||| ||||||||||| |||  |||||||||||||||||| |||||    
T  7054679 ctgtaagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatc 7054616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 6089178 - 6089237
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    |||| |||| ||||| |||||||||||||||||| || | | ||||||||||||||||||    
T  6089178 taccagtaagtccaaaatgttgcaagcattactatatgaattactattgatcattaatca 6089237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 7234940 - 7234885
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||    
T  7234940 tgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatca 7234885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 1946113 - 1946175
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataatta-actattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||| ||||||||| || || | || ||||||||||||||||||||||||    
T  1946113 tgtaagtccaagatgttacaagcattattagatgaatatactattgatcattaatcagtaatc 1946175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 33619109 - 33619162
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||| ||||| |||||||||||||||||| || | | ||||||||||||||||    
T  33619109 tgtaagtccaatatgttgcaagcattactagatgaattactattgatcattaat 33619162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 21017014 - 21016962
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| || | | |||||| ||||| |||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatc 21016962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 25889645 - 25889710
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| ||||||||||| || | | ||||||||||||||||||||||||    
T  25889645 tacctgtaaatccaagatgttgaaagcattactagatgaattactattgatcattaatcagtaatc 25889710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 31786546 - 31786481
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||||||||||||| || | | ||||||| ||||||||||||||||    
T  31786546 tacctgtaaatccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatc 31786481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 1429062 - 1428998
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||| |||||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  1429062 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 1428998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 2888345 - 2888280
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| ||||||||||| |||||||||||| || | | ||||||||||||||||||||||||    
T  2888345 tacctgtaagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatc 2888280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 5830171 - 5830232
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  5830171 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 5830232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 13956262 - 13956197
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||| | |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  13956262 tacctgttagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 13956197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 22255457 - 22255522
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| ||||||||||||||||| |||||| || | | ||||||||||||||||||||||||    
T  22255457 tacctgtaagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatc 22255522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 22973978 - 22973917
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  22973978 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 22973917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 33908512 - 33908572
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  33908512 tgtaagtccaagatgttgcaagcattactagataatt-actattgatcattaatcagcaatc 33908572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 38528133 - 38528072
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  38528133 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 38528072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 39573090 - 39573151
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  39573090 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 39573151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 15992440 - 15992376
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||| |||| |||||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  15992440 taccggtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 15992376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 27330583 - 27330643
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  27330583 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 27330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 31705502 - 31705447
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  31705502 tccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 31705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 699428 - 699489
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||||| |||||||||||||||||||||||| || | | ||||||||| |||||||||||||    
T  699428 ctgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaat 699489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 8437240 - 8437305
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||| || |||||||| || | | ||||||||||||||||||||||||    
T  8437240 tacctgtaagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatc 8437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 24886366 - 24886427
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  24886366 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatc 24886427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 35511370 - 35511317
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  35511370 caagatgttgcaagcattactatatgaattactattgatcattaatcagtaatc 35511317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 35826382 - 35826321
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  35826382 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatc 35826321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 43308560 - 43308495
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  43308560 tacctgtaagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatc 43308495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 7693493 - 7693561
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| || ||||||||||||||||||||| || | | ||||||| ||||||||||||||||    
T  7693493 taatacttgtaagtctaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatc 7693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 9200512 - 9200564
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  9200512 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 9200564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 12910627 - 12910695
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || | | |||||||| |||||||||| ||||    
T  12910627 taatacatgtaagtccaagatgttgcaagcattactagatgaattactattgaacattaatcagcaatc 12910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 22019895 - 22019963
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| || ||||||||| ||||||||||| || | | ||||||||||||||||||||||||    
T  22019895 taatacttgtaagtctaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatc 22019963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 17157921 - 17157866
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | | ||||||||||||||||||||||    
T  17157921 tccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatc 17157866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 5837830 - 5837895
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| || |||||||||||||||||||||||| || | | ||| |||||||||||||| |||||    
T  5837830 tacctgcaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcaataatc 5837895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8467005 - 8467066
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||| |||||||||||||||||| || | | |||||||||||||||| |||||||    
T  8467005 tgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaattagtaatc 8467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 14409237 - 14409176
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| ||||||||||| | | |||||||||||||| |||| ||||    
T  14409237 tgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattattcagcaatc 14409176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 22981072 - 22981133
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| || | | | ||||||||||||||||||||||    
T  22981072 tgtaagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatc 22981133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 25669867 - 25669916
Alignment:
Q  252 atgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||| || | | ||||||||||||||||||||||||    
T  25669867 atgttgcaagcattactagatgaattactattgatcattaatcagtaatc 25669916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 35504644 - 35504705
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||| ||||||| || | | ||||||||| ||||||||||||||    
T  35504644 tgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatc 35504705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 35934171 - 35934236
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||| ||||||||||||||||||||||||  | | | | ||||||||||||||||||||||    
T  35934171 taccggtaagtccaagatgttgcaagcattactagttgaattattattgatcattaatcagtaatc 35934236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 36860703 - 36860764
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||||||||| | | |||||| ||||| ||| |||||||    
T  36860703 tgtaagtccaagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatc 36860764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 42343000 - 42343061
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | || |||||||||||||||||||||    
T  42343000 tgtaagtctaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatc 42343061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 19120147 - 19120195
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagt 297  Q
    ||||||||||||||||||||| || | | ||||||||||||||||||||    
T  19120147 aagatgttgcaagcattactagatgaattactattgatcattaatcagt 19120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 25500826 - 25500762
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||| || ||||||||||||||||||||| || |   ||| |||||||||||||||||||    
T  25500826 tacctgtaagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaat 25500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 7208752 - 7208699
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||| ||||||| || | | | ||||||||||||||||||||||    
T  7208752 caagatgttgcaagtattactagatgaattattattgatcattaatcagtaatc 7208699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 8741781 - 8741720
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||| ||||||||||||| |||| || |   ||||||||||||||||||||||||    
T  8741781 tgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatcagtaatc 8741720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 26269084 - 26269149
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |  ||||||||| ||||| ||||| |||| | |||| |||||||||||||||||||    
T  26269084 tacctgtaagtttaagatgttgtaagcaatactagataaattactactgatcattaatcagtaatc 26269149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 28416441 - 28416392
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatca 295  Q
    |||||||||||||||||||||||  || | | ||||||||||||||||||    
T  28416441 tccaagatgttgcaagcattacttgatgaattactattgatcattaatca 28416392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 40133664 - 40133725
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||  || | | |||||| ||||| |||||||||||    
T  40133664 tgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatc 40133725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 23116122 - 23116090
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattact 268  Q
    ||||||||| |||||||||||||||||||||||    
T  23116122 tacctgtaagtccaagatgttgcaagcattact 23116090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 32563419 - 32563475
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcag 296  Q
    ||||| || ||||||||||||| ||||||| |||| | | |||||||||||||||||    
T  32563419 tgtaagtctaagatgttgcaagaattactagataaattattattgatcattaatcag 32563475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 19089389 - 19089324
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  19089389 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 19089324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 37663677 - 37663612
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  37663677 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 37663612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 32912516 - 32912450
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  32912516 tacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 32912450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 1815576 - 1815641
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||||||| |||||||| || | | || |||||||||||||||||||||    
T  1815576 tacctgtaaatccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatc 1815641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 19440580 - 19440519
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  19440580 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 19440519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 25184392 - 25184453
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  25184392 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 25184453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 46888094 - 46888029
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| |||||||||||| || | | |||||||||||||||||| |||||    
T  46888094 tacctgtaaatccaagatgttacaagcattactagatgaattactattgatcattaatcactaatc 46888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 29584132 - 29584072
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  29584132 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 29584072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 34361428 - 34361362
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  34361428 tacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 34361362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 879484 - 879419
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | | |||||||||||||| |||||||    
T  879484 tacctgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatc 879419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 7703784 - 7703849
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||||||||||||||||||| || | | |||||| |||||||||||||||||    
T  7703784 tacctgtaagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatc 7703849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 23431830 - 23431895
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| ||||||||||||||||||||| || || | | |||||||||||||||| |||||||    
T  23431830 tacctgtaagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatc 23431895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 23761346 - 23761411
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| |||||||||||||||||||||||| || | | | ||||||||||||||||||||||    
T  23761346 tacctataagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatc 23761411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 33341677 - 33341738
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||| ||||||||||| || | | ||||||||||||||||||||||||    
T  33341677 tgtaagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatc 33341738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 35025498 - 35025437
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  35025498 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatc 35025437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 37775937 - 37775998
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  37775937 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 37775998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 49376246 - 49376307
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||| |||| |||||||||||||| | | ||||||||||||||||||||||||    
T  49376246 tgtaagtccaagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatc 49376307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 50697517 - 50697582
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||| ||||||||||| || | | |||||||||||||||| |||||||    
T  50697517 tacctgtaattccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatc 50697582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 50764999 - 50765060
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  50764999 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 50765060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 4598254 - 4598322
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| | ||||||||||||||||||||||||| || || | | ||||||||||||||||||| ||||    
T  4598254 taatacatttaaatccaagatgttgcaagcattattagattaattactattgatcattaatcagcaatc 4598322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 17272243 - 17272303
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||| |||||    
T  17272243 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaat 17272303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 34948034 - 34947966
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || |   |||||||||| |||||||||||||    
T  34948034 taatacatgtaagtccaagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatc 34947966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 47254028 - 47254080
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  47254028 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 47254080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 30002564 - 30002513
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  30002564 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 30002513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 46884035 - 46883985
Alignment:
Q  251 gatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  46884035 gatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 46883985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 55477817 - 55477763
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    |||||||||||||||||||||||| || | | |||||| ||||||||||||||||    
T  55477817 tccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaat 55477763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 6864322 - 6864375
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  6864322 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatc 6864375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 7152140 - 7152075
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||| |||||||||||| || || | | |||||||||||||||||| |||||    
T  7152140 tacctgtaagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatc 7152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 9139508 - 9139569
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| |  | | |||||||||||||||||| |||||    
T  9139508 tgtaagtccaagatgttgcaagcattactagacgaattactattgatcattaatcaataatc 9139569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 32579725 - 32579786
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||| ||||    
T  32579725 tgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatc 32579786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 32592359 - 32592424
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| | |||||||||| |||||||||||||| | | |||||||||| ||||||| |||||    
T  32592359 tacctgtaagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatc 32592424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 33816448 - 33816387
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||| ||||    
T  33816448 tgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatc 33816387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 37288007 - 37288068
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||||||||| || || | | |||||||| |||||||||||||||    
T  37288007 tgtaagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatc 37288068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 39400295 - 39400348
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  39400295 caagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatc 39400348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 55241037 - 55240976
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| |||| | |||||| ||||||||||| |||||    
T  55241037 tgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatc 55240976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 42200009 - 42200071
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || |||  |||| || ||||||||||||||||    
T  42200009 tgtaagtccaagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatc 42200071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 3042898 - 3042959
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||| |||||||||||||||||| || | | | ||||||| ||||||||||||||    
T  3042898 tgtaagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatc 3042959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 27396891 - 27396948
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||| ||| ||||| |||||||||||||||||| || | | ||||||||||||||||    
T  27396891 tacctataagtccaaaatgttgcaagcattactagatgaattactattgatcattaat 27396948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 38591968 - 38592029
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||||||||| |||| || | ||||||||||||||||||||||||    
T  38591968 tgtaaatccaagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatc 38592029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 42505985 - 42505920
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  42505985 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 42505920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 54828607 - 54828546
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  54828607 tgtaagtccaagatgttgcaagcattactagataaattactattgatcattaatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 4015729 - 4015790
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  4015729 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 4015790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 11357287 - 11357226
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  11357287 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 11357226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 22622624 - 22622563
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  22622624 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 22622563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 26941166 - 26941105
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  26941166 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 26941105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 44186427 - 44186362
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| || ||||||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  44186427 tacctctaagtctaagatgttgcaagcattactagataaattactattgatcattaatcagtaatc 44186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 14586585 - 14586525
Alignment:
Q  241 gtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||||||||||||||||||||||| |||| | |||| |||||||||||||||||||    
T  14586585 gtaagtccaagatgttgcaagcattactagataaattactactgatcattaatcagtaatc 14586525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 21009712 - 21009646
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  21009712 tacctgtaagtctaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 21009646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39282921 - 39282983
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| |||||||||||||||||| || | | |||||| |||||||||||||||||    
T  39282921 ctgtaaatccaaaatgttgcaagcattactagatgaattactattaatcattaatcagtaatc 39282983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 46297668 - 46297607
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | |||||||||||||||| |||||||    
T  46297668 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatc 46297607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 46994571 - 46994506
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||| ||||||||||||||| || | | ||||||||||||||||||| ||||    
T  46994571 tacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaatc 46994506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 51212681 - 51212624
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaat 293  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||||||||||    
T  51212681 tacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaat 51212624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 40936252 - 40936304
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  40936252 aagatgttgcaagcattactagataaattactattgatcattaatcggtaatc 40936304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 50475074 - 50475142
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| |||||||||||||||||||||||| || | | | |||||||||||||||| |||||    
T  50475074 taatacttgtaagtccaagatgttgcaagcattactagatgaattagtattgatcattaatcattaatc 50475142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 1089965 - 1090024
Alignment:
Q  242 taaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| ||||||||||||||| || | | |||||||||||||||||| |||||    
T  1089965 taaatccaagattttgcaagcattactagatgaattactattgatcattaatcaataatc 1090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 2008202 - 2008263
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || || ||| ||||||||||||||||||||||    
T  2008202 tgtaagtccaagatgttgcaagcattactagatgaaataa-tattgatcattaatcagtaatc 2008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 33698419 - 33698484
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || ||||| ||||||||||||||| || |||||| ||||||||||||||||||||||    
T  33698419 tacctgtaagtctaagatattgcaagcattactagatgaattaa-tattgatcattaatcagtaatc 33698484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 47481800 - 47481854
Alignment:
Q  248 caagatgttgcaagcattactaaataatta-actattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | || ||||||||||||||||||||||||    
T  47481800 caagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 47481854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 7327388 - 7327327
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | |||||| |||||||||||||||||    
T  7327388 tgtaagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatc 7327327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 21193885 - 21193938
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||| ||||||||||| | | ||||||||| ||||||||||||||    
T  21193885 caagatgttgcaaccattactaaatgaattactattgattattaatcagtaatc 21193938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 22451238 - 22451299
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | | ||||||||||||||||| ||||    
T  22451238 tgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagcaatc 22451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 24708021 - 24707960
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||| ||||||||||||| || |||| | |||||| |||||||||||||||||    
T  24708021 tgtaagtccaagaagttgcaagcattattagataaattactattaatcattaatcagtaatc 24707960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 29099612 - 29099677
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| |||||||||||||||||||||||| || | | || |||||||||||||||| ||||    
T  29099612 tacctttaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatc 29099677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 32373740 - 32373801
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  32373740 tgtaagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatc 32373801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 40552165 - 40552104
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||| ||||||||||||||||||| || | | ||||||||| ||||||||||||||    
T  40552165 tgtaagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatc 40552104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 44891776 - 44891828
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| || | | ||| ||||||||||||||||||||    
T  44891776 aagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatc 44891828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 48355210 - 48355270
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaa 299  Q
    |||||| |||||||||||||||| ||||||| || | | | ||||||||||||||||||||    
T  48355210 ctgtaagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaa 48355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 53229065 - 53228997
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| ||||| | |||||||||||||||||||||| || | | | |||||||||||||||| |||||    
T  53229065 taatacatgtaagttcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatc 53228997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 54506083 - 54506139
Alignment:
Q  246 tccaagatgttgcaagcattactaaataatta-actattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||| || | || ||||||||||||||||||||||||    
T  54506083 tccaaaatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 54506139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 3362531 - 3362586
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||  || | | ||||||||||||||||||||||||    
T  3362531 tccaatatgttgcaagcattactggatgaattactattgatcattaatcagtaatc 3362586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 36012415 - 36012470
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| |||||||||||||| || | | ||||||||||||||||||||||||    
T  36012415 tccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatc 36012470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 3655102 - 3655045
Alignment:
Q  246 tccaagatgttgcaagcattactaaata--attaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| |||  | | ||||||||| ||||||||||||||    
T  3655102 tccaagatgttgcaagcattactagatatgaattactattgattattaatcagtaatc 3655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 25580005 - 25580063
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatc 294  Q
    ||||| |||||| ||||| ||||||||||||||| || | | |||||||||||||||||    
T  25580005 tacctataaatctaagatattgcaagcattactagatgaattactattgatcattaatc 25580063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 43975798 - 43975737
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||| ||||||||||||||| || |||||| ||||||||||||||||| ||||    
T  43975798 tgtaagtccaagattttgcaagcattactagatgaattaa-tattgatcattaatcagcaatc 43975737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 22445975 - 22445910
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||| ||||| |||||||||| ||||||  || | | ||||||||||||||||||||||||    
T  22445975 tacctttaagtccaaaatgttgcaagtattactggatgaattactattgatcattaatcagtaatc 22445910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 33378683 - 33378630
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||| |||||||| || | | |||||||||||||||||| |||||    
T  33378683 caagatgttgcaaacattactagatgaattactattgatcattaatcaataatc 33378630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 269
Target Start/End: Original strand, 34133201 - 34133234
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattacta 269  Q
    ||||||||| ||||||||||||||||||||||||    
T  34133201 tacctgtaagtccaagatgttgcaagcattacta 34133234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 52040828 - 52040767
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| || | | | |||||||||||||| |||||||    
T  52040828 tgtaagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatc 52040767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 2325306 - 2325241
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||||||||||||| || | | ||||||||| ||||||||||||||    
T  2325306 tacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatc 2325241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 41961112 - 41961180
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||| |||||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  41961112 taatacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatc 41961180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 11366309 - 11366243
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||||||||||||||||||| || |||  ||||||||||||||||||||||||    
T  11366309 tacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatc 11366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 33709156 - 33709095
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||||||||| || | | |||||||||||||||||| |||||    
T  33709156 tgtaaatccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatc 33709095  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 19289254 - 19289191
Alignment:
Q  233 taatacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcag 296  Q
    |||||||||||| |||||||| ||||||||||||||| || | | |||||||||||||||||||    
T  19289254 taatacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcag 19289191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 26357862 - 26357917
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  26357862 tccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 26357917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 35959177 - 35959232
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  35959177 tccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 35959232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 27349873 - 27349811
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  27349873 ctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 27349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 4763906 - 4763971
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| |||||||| |||||||||||||||  | | | ||||||||||||||||||||||||    
T  4763906 tacctgtaagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatc 4763971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 7006862 - 7006801
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  7006862 tgtaagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatc 7006801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 19424570 - 19424505
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||| || || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  19424570 tacctgcaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 19424505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 19500831 - 19500778
Alignment:
Q  248 caagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  19500831 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 19500778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 4478645 - 4478705
Alignment:
Q  241 gtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||| |||||||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  4478645 gtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatc 4478705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 19314135 - 19314186
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  19314135 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaat 19314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 33660291 - 33660240
Alignment:
Q  250 agatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  33660291 agatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 33660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 5881808 - 5881869
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | |||||||||||||| |||||||||    
T  5881808 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatc 5881869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 13711734 - 13711799
Alignment:
Q  236 tacctgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||| || |||||||||||| || ||||| || | | ||||||||||||||||||||||||    
T  13711734 tacctgtaagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatc 13711799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 18494205 - 18494144
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||| ||||||||||| || | |  |||||||||||||||||||||||    
T  18494205 tgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatc 18494144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 41465780 - 41465841
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| ||||||||||||||| |||||||| || | | ||||||||||||||||||| ||||    
T  41465780 tgtaagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatc 41465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 43648169 - 43648108
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||| |||| |||||||| || | | ||||||||||||||||||||||||    
T  43648169 tgtaagtccaagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatc 43648108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 31570649 - 31570597
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||| ||| || | | ||||||||||||||||||||||||    
T  31570649 aagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatc 31570597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 37905989 - 37906049
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaat 300  Q
    ||||| |||||||||||||||| ||||||  || | | |||||||||||||||||||||||    
T  37905989 tgtaagtccaagatgttgcaagaattactggatgaattactattgatcattaatcagtaat 37906049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 4167201 - 4167262
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||  || | | |||||| ||||| |||||||||||    
T  4167201 tgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatc 4167262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 18257453 - 18257401
Alignment:
Q  249 aagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||||||||||||||||||| || | | | |||| |||||||||||||||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatc 18257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8166 - 8227
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  8166 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 408335 - 408274
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  408335 tgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 408274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 94006 - 93945
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||| || | |  ||||||||||||||||| |||||    
T  94006 tgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatc 93945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 413 - 468
Alignment:
Q  246 tccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    |||||||||||||||||||||||| || | | |||||| ||||| |||||||||||    
T  413 tccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatc 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 145923 - 145861
Alignment:
Q  239 ctgtaaatccaagatgttgcaagcattactaaat-aattaactattgatcattaatcagtaat 300  Q
    |||||| ||||||||||||||||||||||||||| |||  || ||||||||||||||||||||    
T  145923 ctgtaagtccaagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaat 145861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 12188 - 12249
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| || ||||||||||||||||||||| || | | ||||||||||||||||||||||||    
T  12188 tgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatc 12249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 44235 - 44296
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||| |||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  44235 tgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatc 44296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 154552 - 154491
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||| |||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  154552 tgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatc 154491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 100994 - 101053
Alignment:
Q  240 tgtaaatccaagatgttgcaagcattactaaataattaactattgatcattaatcagtaatc 301  Q
    ||||| |||||||||||||||||||||||||||   | ||||  ||||||||||||||||||    
T  100994 tgtaagtccaagatgttgcaagcattactaaatgcattacta--gatcattaatcagtaatc 101053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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