View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16440_high_1 (Length: 504)
Name: NF16440_high_1
Description: NF16440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16440_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 58 - 487
Target Start/End: Complemental strand, 33707955 - 33707526
Alignment:
| Q |
58 |
tgctgcaagtattgttcaaacacaagcaaggtgcatgagactgaacaggaaagagaatatacctaggcaacgaactttaacaattatgccctgactttcc |
157 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33707955 |
tgctgcaagtattgttcaaacacaagcaaggtgcatgagactgaacaggaaagagaatatacctaggcaacgaactttaacaattatgccctgactttcc |
33707856 |
T |
|
| Q |
158 |
attatggagtcaacatatagacctgaaccagcacaagtggcgcaaagcacggcacctttggcatgacagtcattgcatcgggtattgttaccaatagctt |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
33707855 |
attatggagtcaacatatagacctgaaccagcacaagtggcgcaaagcacggcacctttggcatgacagtcattgcatctggtattgttaccaatagctt |
33707756 |
T |
|
| Q |
258 |
tttcagccaaagataacccaacaggcttctcaattatttcttctgggatagctttatcataacaaaacagagactcaagattacttcggcgtctgttctc |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
33707755 |
tttcagccaaagataacccaacaggcttctcaattatttcttctgggatagctttatcataacaaaacagagattcaagattacttcggcgtctgttctc |
33707656 |
T |
|
| Q |
358 |
atcnnnnnnnaaacttgatgcagactgaaacataaggaaacagttagctgtgacattcattagatatagaacaatcttctgcataattagtatgtaaaaa |
457 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
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| T |
33707655 |
atctttttttaaacttgatgcagactgaaacataaggaaacagttagctgtgacattcattagatatagaacaatcttctgcataagtaatatgtaaaaa |
33707556 |
T |
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| Q |
458 |
gctctctaatctcattgaagatccatcaat |
487 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
33707555 |
gctctctaatctcattgaagatccatcaat |
33707526 |
T |
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