View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16440_low_6 (Length: 287)
Name: NF16440_low_6
Description: NF16440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16440_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 37353887 - 37353624
Alignment:
| Q |
8 |
agattattctctaattttctatctctggatttgtgctagactaagacctttgatctaccatcccacataacacaaatcacatcattagtagccattaact |
107 |
Q |
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| T |
37353887 |
agattatcctctaattttctatctctggatttgtgctagactaagacctttgatctaccatcccacataacacaaatcacatcattagtagccattaact |
37353788 |
T |
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| Q |
108 |
atttgacaattgatcacctaacctgtgatgataaaccaattttaaagccatgttcagataattaatgaatgattgtcatttcaatctagctagtggcaaa |
207 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37353787 |
atttgacaattggtcacctaacctgtgatgataaaccaattttaaagccatgttcagataattaatgaatgattgtcatttcaatctagctagtggcaaa |
37353688 |
T |
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| Q |
208 |
gtttataccaatattaggcataaatgaatcctatttctcttgttctttatcccataattatagt |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37353687 |
gtttataccaatattaggcataaatgaatcctatttctcttgttctttatcccataattatagt |
37353624 |
T |
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