View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16443_high_7 (Length: 286)
Name: NF16443_high_7
Description: NF16443
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16443_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 21122495 - 21122241
Alignment:
| Q |
19 |
ttatagttgttttactagagacaccgttaaatgttgctatcttattctcatcatcgtttagtaaataattatatctatatatgtagaattatatcttata |
118 |
Q |
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| T |
21122495 |
ttatagttgttttactagagacaccgttaaatgttgctatcttattctcatcatcgtttagtaaataattatatctatatatgtagaattatatcttata |
21122396 |
T |
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| Q |
119 |
tacgtattagtcaactaataatgggtttggagtaccattatttttaaaaataatgggtttggaatgcctgtattctcctgaataataaaatcattttgct |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
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| T |
21122395 |
tacgtattagtcaactaataatgggtttggagtaccattatttttaaaaataatgggtttggaatacctgtattctcctga---ataaaatcattttgct |
21122299 |
T |
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| Q |
219 |
tctctnnnnnnngtcaactaataatgctatgaatacgaattttatcaattctcctttg |
276 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21122298 |
tctctaaaaaaagtcaactaataatgctatgaatacgaattttatcaattctcctttg |
21122241 |
T |
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