View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16444_low_17 (Length: 327)
Name: NF16444_low_17
Description: NF16444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16444_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 303
Target Start/End: Original strand, 36606862 - 36607154
Alignment:
| Q |
11 |
catagggagatcattataggtaacaaatatatcattctaatggtaatgtacctgatgttttgaagtatgtgatccctggattcgttttgaagaatgaagg |
110 |
Q |
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| T |
36606862 |
catagggagatcattataggtaacaaatatatcattctaatggtaatgtacctgatattttgaagtatgtgatccctggattcgttttgaagaatgaagg |
36606961 |
T |
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| Q |
111 |
gttgcttttgaaggtgctaaggttggcacctctacattaggcttcaaaccatttacaccaaaatcggatttcggaaatttagacaaggtctctgtattaa |
210 |
Q |
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| T |
36606962 |
gttgcttttgaaggtgctaaggttggcacctctacattaggcttcaaaccatttacaccaaaatcggatttcggaaatttagacaaggtttctgtattaa |
36607061 |
T |
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| Q |
211 |
ttttctgtgttgatataccaccagccttcatcagacttcctctcattggagacctcgtctctttaaccttttcatgttttggtcccatcttta |
303 |
Q |
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| T |
36607062 |
ttttctgtgttgatataccaccagccttcatcagactttctctcattggagacctcgtctctttaaccttttcatgttttggtcccatcttta |
36607154 |
T |
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