View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16444_low_25 (Length: 217)
Name: NF16444_low_25
Description: NF16444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16444_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 42091638 - 42091439
Alignment:
| Q |
1 |
atgaatgaagaagacttttcttgataggttgaagaagttcaggaggaacagaagcaccaaccaacatgtacctaaatatcaaagcttgtaactcaagttc |
100 |
Q |
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| T |
42091638 |
atgaatgaagaagacttttcttgataggttgaagaagttcaggaggaacagaagcaccaaccaacatgtacctaaatatcaaagcttgtaactcaagttc |
42091539 |
T |
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| Q |
101 |
ttgccattgagataagctgaaatggcttcccattcctattcctaataaagagnnnnnnnntgtaagaattagttaaagtgttggatccaaaagaagaaag |
200 |
Q |
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| T |
42091538 |
ttgccattgagataagctgaaatggcttcccattcctattcctaataaagag--agaaaatgtaagaattagttaaagtgttggatccaaaagaggaaag |
42091441 |
T |
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