View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16446_high_1 (Length: 650)

Name: NF16446_high_1
Description: NF16446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16446_high_1
NF16446_high_1
[»] chr3 (62 HSPs)
chr3 (39-650)||(27390686-27391297)
chr3 (147-252)||(21869347-21869455)
chr3 (147-250)||(39580399-39580505)
chr3 (147-246)||(959353-959455)
chr3 (147-250)||(39674663-39674769)
chr3 (128-250)||(41530159-41530289)
chr3 (147-250)||(42864771-42864875)
chr3 (127-252)||(25041818-25041951)
chr3 (317-520)||(18025247-18025448)
chr3 (147-250)||(29360246-29360353)
chr3 (355-547)||(27377438-27377635)
chr3 (174-250)||(4533985-4534064)
chr3 (343-548)||(1366856-1367055)
chr3 (548-635)||(27377663-27377750)
chr3 (447-520)||(27459608-27459681)
chr3 (452-520)||(27919615-27919683)
chr3 (452-520)||(27979743-27979811)
chr3 (452-548)||(28003461-28003557)
chr3 (452-520)||(28036704-28036772)
chr3 (548-627)||(12147118-12147197)
chr3 (567-650)||(28054936-28055019)
chr3 (567-650)||(28065361-28065444)
chr3 (173-233)||(53330248-53330311)
chr3 (173-233)||(53333932-53333995)
chr3 (173-233)||(53337609-53337672)
chr3 (449-509)||(26179552-26179612)
chr3 (457-509)||(26235983-26236035)
chr3 (461-548)||(28005119-28005206)
chr3 (447-509)||(26129502-26129564)
chr3 (552-621)||(18025161-18025230)
chr3 (160-205)||(22976273-22976318)
chr3 (552-635)||(27348327-27348410)
chr3 (564-650)||(27919757-27919844)
chr3 (564-650)||(28149173-28149259)
chr3 (452-503)||(28151203-28151254)
chr3 (130-200)||(51360636-51360711)
chr3 (447-509)||(26128198-26128260)
chr3 (447-509)||(26178248-26178310)
chr3 (447-509)||(26630609-26630671)
chr3 (564-641)||(26630753-26630831)
chr3 (569-650)||(28036855-28036936)
chr3 (465-509)||(8539829-8539873)
chr3 (450-518)||(19476134-19476202)
chr3 (415-509)||(26202085-26202178)
chr3 (564-650)||(27350006-27350092)
chr3 (608-650)||(28083063-28083105)
chr3 (467-509)||(28135287-28135329)
chr3 (565-650)||(27379345-27379430)
chr3 (551-611)||(1366772-1366832)
chr3 (457-509)||(26140144-26140196)
chr3 (472-520)||(28084341-28084389)
chr3 (608-650)||(8539696-8539738)
chr3 (447-485)||(11420327-11420365)
chr3 (466-520)||(19483608-19483662)
chr3 (43-81)||(22976693-22976731)
chr3 (608-650)||(27979932-27979974)
chr3 (609-650)||(18077130-18077171)
chr3 (154-191)||(30552479-30552516)
chr3 (614-650)||(27389216-27389252)
chr3 (608-648)||(28135435-28135475)
chr3 (594-650)||(28161397-28161453)
chr3 (594-650)||(28185239-28185295)
[»] chr7 (13 HSPs)
chr7 (128-250)||(26279411-26279541)
chr7 (128-250)||(22204789-22204919)
chr7 (147-250)||(22229844-22229950)
chr7 (147-263)||(25444113-25444232)
chr7 (128-250)||(40819397-40819526)
chr7 (148-250)||(22293350-22293455)
chr7 (147-252)||(45281320-45281428)
chr7 (147-238)||(30948065-30948159)
chr7 (128-263)||(19927708-19927850)
chr7 (147-250)||(15042727-15042833)
chr7 (42-76)||(15043192-15043226)
chr7 (19-68)||(22205248-22205297)
chr7 (19-68)||(22229442-22229491)
[»] chr8 (10 HSPs)
chr8 (128-252)||(17630624-17630756)
chr8 (147-250)||(10861273-10861379)
chr8 (147-250)||(17068681-17068787)
chr8 (128-250)||(17579486-17579616)
chr8 (147-250)||(20289845-20289951)
chr8 (147-250)||(21076475-21076581)
chr8 (147-250)||(29055071-29055177)
chr8 (128-250)||(34964212-34964342)
chr8 (128-250)||(44718039-44718169)
chr8 (128-250)||(3046238-3046365)
[»] scaffold0017 (1 HSPs)
scaffold0017 (128-250)||(37515-37645)
[»] chr5 (6 HSPs)
chr5 (147-250)||(6666202-6666308)
chr5 (147-250)||(8871750-8871856)
chr5 (128-250)||(13854159-13854289)
chr5 (147-250)||(36606647-36606753)
chr5 (147-256)||(32659427-32659539)
chr5 (179-240)||(28063854-28063917)
[»] chr2 (6 HSPs)
chr2 (128-250)||(14313851-14313981)
chr2 (147-250)||(14811782-14811888)
chr2 (147-250)||(13043294-13043395)
chr2 (443-530)||(22392460-22392547)
chr2 (547-627)||(22392591-22392671)
chr2 (564-650)||(22394322-22394408)
[»] chr6 (5 HSPs)
chr6 (147-250)||(21112602-21112708)
chr6 (147-252)||(1413862-1413972)
chr6 (147-250)||(8862537-8862642)
chr6 (128-250)||(9149671-9149801)
chr6 (147-250)||(34752401-34752507)
[»] chr1 (5 HSPs)
chr1 (147-252)||(3365966-3366074)
chr1 (151-263)||(22150136-22150251)
chr1 (185-250)||(1608509-1608577)
chr1 (147-206)||(23205698-23205757)
chr1 (42-71)||(22150619-22150648)
[»] chr4 (5 HSPs)
chr4 (147-250)||(26261686-26261793)
chr4 (147-250)||(32761035-32761141)
chr4 (147-221)||(54260621-54260695)
chr4 (179-246)||(51161612-51161683)
chr4 (45-81)||(26261157-26261193)
[»] scaffold1142 (2 HSPs)
scaffold1142 (424-520)||(1304-1400)
scaffold1142 (611-650)||(1518-1557)
[»] scaffold0043 (4 HSPs)
scaffold0043 (444-547)||(53847-53950)
scaffold0043 (317-402)||(54012-54097)
scaffold0043 (547-635)||(53732-53820)
scaffold0043 (611-650)||(51998-52037)
[»] scaffold0257 (1 HSPs)
scaffold0257 (564-650)||(18593-18680)


Alignment Details
Target: chr3 (Bit Score: 564; Significance: 0; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 564; E-Value: 0
Query Start/End: Original strand, 39 - 650
Target Start/End: Complemental strand, 27391297 - 27390686
Alignment:
Q  39 acggatacttctgtcttacatatttccttttaataaaagaatatgaaataaaatcacataaagatgggcaatgctatcaaatttgtctg--aaaaatatg 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  27391297 acggatacttctgtcttacatatttccttttaataaaagaatatgaaataaaattacataaagatgggcaatgctatcaaatttgtctggaaaaaatatg 27391198  T
Q  137 taattctcacttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatactaattttaaatttaatt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27391197 taattgtcacttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatactaattttaaatttaatt 27391098  T
Q  237 ttttaataacgtattgtatccgtatcgggtcttcatagctactgcttttgttcttattacaggaattgacgaaccaacagcatttacaaggagaaattga 336  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27391097 ttttaataacttatcgtatccgtatcgggtcttcatagctactgcttttgttcttattacaggaattgacgaaccaacagcatttacaaggagaaattga 27390998  T
Q  337 tgccagcatcaaaccttttcatggaaataataatgtaatatagcagcaccacattgtgcatataaagctacagattaaaaatattaaagaaaataaattt 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  27390997 tgccagcatcaaaccttttcatggaaataataatgtaatatagcagcaccacattgtgcatataaagctacagatt--aaatattaaagaaaataaattt 27390900  T
Q  437 taatggaacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatc 536  Q
    || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390899 tactggaacaactgcttaataatatgctgcaactaatttaaattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatc 27390800  T
Q  537 tttgtccaccatacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatac 636  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390799 tttgtccaccatacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatac 27390700  T
Q  637 tacaatcttaaaca 650  Q
    ||||||||||||||    
T  27390699 tacaatcttaaaca 27390686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 21869347 - 21869455
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  21869347 ttgatcattttcattaatgtaaatgtttgtttattatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 21869446  T
Q  244 aacgtattg 252  Q
    |||||||||    
T  21869447 aacgtattg 21869455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 39580399 - 39580505
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  39580399 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 39580498  T
Q  244 aacgtat 250  Q
    |||||||    
T  39580499 aacgtat 39580505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 959353 - 959455
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  959353 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 959452  T
Q  244 aac 246  Q
    |||    
T  959453 aac 959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 39674663 - 39674769
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||| ||||||||    
T  39674663 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaaatttttaat 39674762  T
Q  244 aacgtat 250  Q
    |||||||    
T  39674763 aacgtat 39674769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 41530289 - 41530159
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||       
T  41530289 aaaaatatgtaattgtcacttgctttgatcattttcattaatgtgaatgtttgattattatcatttgtagttatgtttatacattgtgcacttatactat 41530190  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||| ||||    
T  41530189 taattttaaatttaattttttaataatgtat 41530159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 42864771 - 42864875
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcactta-tactaattttaaatttaattttttaataa 245  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||    
T  42864771 ttgatcattttcattaatgtgaatgtttgtttatcttcatttttagttatgtttatacattgtgcacatactattaattttaaatttaattttttaataa 42864870  T
Q  246 cgtat 250  Q
    |||||    
T  42864871 cgtat 42864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 25041818 - 25041951
Alignment:
Q  127 gaaaaatatgtaattctcacttg-----atcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac-- 219  Q
    ||||||||||||||| |||||||     |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||||      
T  25041818 gaaaaatatgtaattgtcacttgttttgatcattttcattaaggtgaatgtttgtttctcatcatttttagttatgtttatacattgtgcacttatacta 25041917  T
Q  220 -taattttaaatttaattttttaataacgtattg 252  Q
     ||||||| |||||||||||||||||||||||||    
T  25041918 ttaattttcaatttaattttttaataacgtattg 25041951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 317 - 520
Target Start/End: Complemental strand, 18025448 - 18025247
Alignment:
Q  317 catttacaaggagaaattgatgccagcatcaaaccttttcatggaaataataatgtaatatagcagcaccacattgtgcatataaagctacagattaaaa 416  Q
    ||||| || ||||||||||||  || ||||||||||| |||  ||||||||||| | |||||| | ||||  ||  |||||||||||||| | || |||     
T  18025448 cattttcatggagaaattgatagcaccatcaaaccttctcacagaaataataatttcatatagtaccaccgaatcttgcatataaagctaaaaatgaaa- 18025350  T
Q  417 atattaaagaaaataaattttaatggaacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtca 516  Q
     |||| ||||||||  |||||| |  ||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||| | ||||||| |||    
T  18025349 -tatttaagaaaatttattttattctaacaactacttaaaactatgctgcaactaatttacattttcatgctatgcaatcagttggcgagttcaccatca 18025251  T
Q  517 gaaa 520  Q
    ||||    
T  18025250 gaaa 18025247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 29360246 - 29360353
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcact-----tatactaattttaaatttaatttttta 241  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| |     |||| ||||||||||||||||||||||    
T  29360246 ttgatcattttcattaatgtcaatgtttgtttattatca-ttttagttatgtttatacattgtgcatttataatatattaattttaaatttaatttttta 29360344  T
Q  242 ataacgtat 250  Q
    |||||||||    
T  29360345 ataacgtat 29360353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 355 - 547
Target Start/End: Original strand, 27377438 - 27377635
Alignment:
Q  355 tcatggaaataataatgtaatatagcagcaccacattgtgcatataaagctacagattaaaaatattaaagaaaataaattttaatggaaca-------a 447  Q
    |||||||||||| | |||||| ||||| |||| |||||||||||| |||||| | || ||   ||||||||||||||||||||| |  ||||       |    
T  27377438 tcatggaaataaaattgtaatttagcaccacctcattgtgcatattaagctaaaaatcaag--tattaaagaaaataaattttactctaacaggtagcaa 27377535  T
Q  448 ctacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatctttgtccacca 547  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||| || |||||| |||   ||||||||||    
T  27377536 ctacttaaaaatattctgcaactaatttatattttcatgctatgcaattagttggaggattcaacgtcagaaaaacctgtagcggaactgttgtccacca 27377635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 4533985 - 4534064
Alignment:
Q  174 tgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaataacgtat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||    
T  4533985 tgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaataacgtat 4534064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 343 - 548
Target Start/End: Complemental strand, 1367055 - 1366856
Alignment:
Q  343 catcaaaccttttcatggaaataataatgtaatatagcagcaccacattgtgcatataaagctacagattaaaaatattaaagaaaataaattttaatgg 442  Q
    |||| |||||| | |||||||| | |||||||||||||| |||||| || |||||||||||  ||| ||||||  ||||| ||||||||||| ||| |      
T  1367055 catcgaaccttctaatggaaatgacaatgtaatatagcaacaccacgttatgcatataaagaaacaaattaaa--tattatagaaaataaatattactca 1366958  T
Q  443 aacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatctttgtc 542  Q
     |||||||   ||  |||| |||||||||||||||||||||||| |||| ||||||||||||||||||  || ||||  || ||||||   |||||||||    
T  1366957 cacaacta---aaacatattctgcaactaatttacattttcatgctatg-aattagttggagggttcaatgttagaacaacctgtagccacatctttgtc 1366862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 635
Target Start/End: Original strand, 27377663 - 27377750
Alignment:
Q  548 tacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattata 635  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||  |||||| |||||| |||||| ||||||||||||| |||||||    
T  27377663 tacaagtgattgatcataaacaaaaggcatttcctctattttgctcgtatttattctgacacttttccaatgcaggaattgaattata 27377750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 447 - 520
Target Start/End: Complemental strand, 27459681 - 27459608
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  27459681 actacttaaaaataagttgcaactaatttacattttcatgttatgcaagcagttggagggttcaacgtcagaaa 27459608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 27919615 - 27919683
Alignment:
Q  452 ttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    |||| |||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  27919615 ttaaaaatatgttgcaactaatttacattttcttgttatgcaatcagttggagggttcaacgtcagaaa 27919683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 27979743 - 27979811
Alignment:
Q  452 ttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    |||| |||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  27979743 ttaaaaatatgttgcaactaatttacattttcttgttatgcaatcagttggagggttcaacgtcagaaa 27979811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 28003461 - 28003557
Alignment:
Q  452 ttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatctttgtccaccat 548  Q
    |||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||| |  |||||||  | |||||||||||||    
T  28003461 ttaaaaatatgttgcaagtaatttacattttcatgttatgcaatcagttggagggttcaacatcagaaaaaaatgtagcatcaactttgtccaccat 28003557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 28036704 - 28036772
Alignment:
Q  452 ttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |||||||    
T  28036704 ttaaaaatatgatgcaactaatttacattttcatgttatgcaatcagttggagggttcaacatcagaaa 28036772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 548 - 627
Target Start/End: Original strand, 12147118 - 12147197
Alignment:
Q  548 tacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaatt 627  Q
    ||||||| ||||||  |||||||||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||||    
T  12147118 tacaagtgattgatcataaacaaaaggcatttcctctattttgcttgtatttactctgacacttttccaatgcaggaatt 12147197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 567 - 650
Target Start/End: Original strand, 28054936 - 28055019
Alignment:
Q  567 acaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||| ||  ||||| |||||||||| | | ||||| |||||||||||||| ||||||||||||||||||||||    
T  28054936 acaaaaggcatttcccctgatttgcttgtattttttttaacactttgtcaatgcaggaattgaattatactacaatcttaaaca 28055019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 567 - 650
Target Start/End: Original strand, 28065361 - 28065444
Alignment:
Q  567 acaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||| ||  ||||| |||||||||| | | ||||| |||||||||||||| ||||||||||||||||||||||    
T  28065361 acaaaaggcatttcccctgatttgcttgtattttttttaacactttgtcaatgcaggaattgaattatactacaatcttaaaca 28065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 53330311 - 53330248
Alignment:
Q  173 ttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaattta 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||    
T  53330311 ttgtttattatcatttttagttatgtttatacattgtgcacttatactattaattttaaattta 53330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 53333995 - 53333932
Alignment:
Q  173 ttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaattta 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||    
T  53333995 ttgtttattatcatttttagttatgtttatacattgtgcacttatactattaattttaaattta 53333932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 53337672 - 53337609
Alignment:
Q  173 ttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaattta 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||    
T  53337672 ttgtttattatcatttttagttatgtttatacattgtgcacttatactattaattttaaattta 53337609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 449 - 509
Target Start/End: Complemental strand, 26179612 - 26179552
Alignment:
Q  449 tacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  26179612 tacttaaaaatatgctgcaactaacttacattttcatgcaatgcaattagttggagggttc 26179552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 509
Target Start/End: Complemental strand, 26236035 - 26235983
Alignment:
Q  457 aatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  26236035 aatatgctgcaactaatttacattttcatgcaatgcaattagttggagggttc 26235983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 548
Target Start/End: Original strand, 28005119 - 28005206
Alignment:
Q  461 tgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatctttgtccaccat 548  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||  | ||||||| | | ||||  ||| |||||||||||||    
T  28005119 tgctgcaactaatttacattttcatgctatgcaattagttggagggctctacatcagaaaaattagtaggtgaaactttgtccaccat 28005206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 26129564 - 26129502
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||| |||| ||||||||||    
T  26129564 actacttaaaaatatgctgcaactaaattacattttcatgctatgcatttagctggagggttc 26129502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 621
Target Start/End: Complemental strand, 18025230 - 18025161
Alignment:
Q  552 agtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgca 621  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||||| | |||||||||||| |||||||    
T  18025230 agtcattgatcataaacaaaaggcatttcctctattttgctcgtattctctctgaaacttttccaatgca 18025161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 22976318 - 22976273
Alignment:
Q  160 ttaatgtgaatgtttgtttattatcatttttagttatgtttataca 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  22976318 ttaatatgaatgtttgtttattatcatttttagttatgtttataca 22976273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 552 - 635
Target Start/End: Original strand, 27348327 - 27348410
Alignment:
Q  552 agtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattata 635  Q
    ||||||||||  |||||||||||||||||||||||||| |  |||||  |||||| |||||| |||||||| |||| |||||||    
T  27348327 agtcattgatcataaacaaaaggcatttcctctatttttctcgtattcattctgacacttttccaatgcagtaattgaattata 27348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 27919757 - 27919844
Alignment:
Q  564 taaacaaaaggcatttcctct-attttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||||||||| || ||||| | |||||| ||| | | |||||||||||| ||||||| ||||||||||||||||| ||||    
T  27919757 taaacaaaaggcatttcccctcatttttcttgtattatttttaacactttttcaatgtaggaattgaattatactacaatcttcaaca 27919844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 28149173 - 28149259
Alignment:
Q  564 taaacaaaaggcatttcctctattttgcctgtattttttctgaa-actttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||||||   |||||||  ||||| ||| |||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  28149173 taaacaaaaggcatttccctcattttgctagtattcttt-tgaacactttgtcaatgcaggaattgaattatactacaatcttaaaca 28149259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 28151203 - 28151254
Alignment:
Q  452 ttaataatatgctgcaactaatttacattttcatgttatgcaattagttgga 503  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  28151203 ttaaaaatatgttgcaactaatttacattttcatgttatgcaatcagttgga 28151254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 51360711 - 51360636
Alignment:
Q  130 aaatatgtaattctcacttg-----atcattttcattaatgtgaatgtttgtttattatcatttttagttatgttt 200  Q
    |||||||||||| |||||||     |||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  51360711 aaatatgtaattgtcacttgactttatcattttcattagcgtgaatgtttgtttattatcattttttgttatgttt 51360636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 26128260 - 26128198
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||| | |||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  26128260 actacttgaaaatataatgcaactaatttacattttcatgctatgcaattagttagagggttc 26128198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Complemental strand, 26178310 - 26178248
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||| | |||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  26178310 actacttgaaaatataatgcaactaatttacattttcatgctatgcaattagttagagggttc 26178248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Original strand, 26630609 - 26630671
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||||| |||||  |||||||||||||||||| |||| | ||||||||||||||||||||    
T  26630609 actacttaaaaatatcatgcaactaatttacatttccatggtttgcaattagttggagggttc 26630671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 641
Target Start/End: Original strand, 26630753 - 26630831
Alignment:
Q  564 taaacaaaaggcatttcctctattttgcctgtatt-ttttctgaaactttttcaatgcaggaattaaattatactacaa 641  Q
    |||||||||||||||||| ||||||||| |||||| |||| |||  |||||| |||||||||||| ||||||| |||||    
T  26630753 taaacaaaaggcatttcccctattttgcttgtattcttttttgactcttttttaatgcaggaattgaattatattacaa 26630831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 650
Target Start/End: Original strand, 28036855 - 28036936
Alignment:
Q  569 aaaaggcatttcctct-attttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||| || ||||||  |||||||||| ||| || ||||||||| ||||||| ||||||||||||||||||||||    
T  28036855 aaaaggcatttccactcattttggttgtatttttt-tgacaccttttcaatgtaggaattgaattatactacaatcttaaaca 28036936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 509
Target Start/End: Complemental strand, 8539873 - 8539829
Alignment:
Q  465 gcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  8539873 gcaactaatttacattttcattttatgcaatcagttggagggttc 8539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 450 - 518
Target Start/End: Original strand, 19476134 - 19476202
Alignment:
Q  450 acttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcaga 518  Q
    |||||| |||||| | |||||||||||||||||| || |||| |||||||||||||||||  |||||||    
T  19476134 acttaaaaatatgttacaactaatttacattttcttgctatggaattagttggagggttctacgtcaga 19476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 509
Target Start/End: Complemental strand, 26202178 - 26202085
Alignment:
Q  415 aaatattaaagaaaataaattttaatggaacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    |||||||||||||||||||||| | |  | | ||||||| | |||||  ||||||||||||||||||||||| |||||| | || ||||||||||    
T  26202178 aaatattaaagaaaataaattt-agttaacctactacttgaaaatataatgcaactaatttacattttcatgctatgcattcagctggagggttc 26202085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 27350006 - 27350092
Alignment:
Q  564 taaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||||||  |||||| |  ||||| | |  || || |||||||||||| |||| ||||||||||||||||||||||    
T  27350006 taaacaaaaggcatttcccttattttcctagtattctgttggacacattttcaatgcagtaattgaattatactacaatcttaaaca 27350092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 608 - 650
Target Start/End: Original strand, 28083063 - 28083105
Alignment:
Q  608 actttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  28083063 actttgtcaatgcaggaattgaattatactacaatcttaaaca 28083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 509
Target Start/End: Original strand, 28135287 - 28135329
Alignment:
Q  467 aactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  28135287 aactaatttacatttttatgatatgcaattagttggagggttc 28135329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 565 - 650
Target Start/End: Original strand, 27379345 - 27379430
Alignment:
Q  565 aaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||||||||  ||||||    ||||| | | ||| || |||||||||||| |||| ||||||||||||||||||||||    
T  27379345 aaacaaaaggcatttcccttattttcttagtattctgtttgacacattttcaatgcagtaattgaattatactacaatcttaaaca 27379430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 611
Target Start/End: Complemental strand, 1366832 - 1366772
Alignment:
Q  551 aagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactt 611  Q
    |||||||||||  ||||||||||| ||||||||| |||||| |||||| |||||| |||||    
T  1366832 aagtcattgatcataaacaaaaggtatttcctcttttttgcttgtattctttctggaactt 1366772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 509
Target Start/End: Complemental strand, 26140196 - 26140144
Alignment:
Q  457 aatatgctgcaactaatttacattttcatgttatgcaattagttggagggttc 509  Q
    |||||||||||||||| ||||||||||||| |||||| |||| |||| |||||    
T  26140196 aatatgctgcaactaaattacattttcatgctatgcatttagctggaaggttc 26140144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 520
Target Start/End: Original strand, 28084341 - 28084389
Alignment:
Q  472 atttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    ||||||||||||||| ||| |||||||||||| |||||| |||||||||    
T  28084341 atttacattttcatgctatacaattagttggaaggttcaacgtcagaaa 28084389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 650
Target Start/End: Complemental strand, 8539738 - 8539696
Alignment:
Q  608 actttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||    
T  8539738 acttttccaatgcaggaattgaattatactacaatcctaaaca 8539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 485
Target Start/End: Original strand, 11420327 - 11420365
Alignment:
Q  447 actacttaataatatgctgcaactaatttacattttcat 485  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  11420327 actacttaaaaatatgttgcaactaatttacattttcat 11420365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 520
Target Start/End: Complemental strand, 19483662 - 19483608
Alignment:
Q  466 caactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    ||||| |||||||||||||||  ||||||||||||||| |||||| ||| |||||    
T  19483662 caacttatttacattttcatgacatgcaattagttggaaggttcaacgttagaaa 19483608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 22976731 - 22976693
Alignment:
Q  43 atacttctgtcttacatatttccttttaataaaagaata 81  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  22976731 atacttctgtcttacatatttccttttaaaaaaaaaata 22976693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 650
Target Start/End: Original strand, 27979932 - 27979974
Alignment:
Q  608 actttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||||||||||| | |||||||||||||| |||||    
T  27979932 actttttcaatgcaggaattgagttatactacaatctcaaaca 27979974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 650
Target Start/End: Complemental strand, 18077171 - 18077130
Alignment:
Q  609 ctttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||    
T  18077171 ctttttcaaagcaagaattgaattatactacaatcttaaaca 18077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 30552479 - 30552516
Alignment:
Q  154 ttttcattaatgtgaatgtttgtttattatcattttta 191  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  30552479 ttttcattaatatgaatgtttgtttattatcatgttta 30552516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 614 - 650
Target Start/End: Complemental strand, 27389252 - 27389216
Alignment:
Q  614 tcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||||| |||||||||||||||| |||||    
T  27389252 tcaatgcaggaattcaattatactacaatctgaaaca 27389216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 608 - 648
Target Start/End: Original strand, 28135435 - 28135475
Alignment:
Q  608 actttttcaatgcaggaattaaattatactacaatcttaaa 648  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  28135435 actttgtcaatgcaggagttgaattatactacaatcttaaa 28135475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 28161397 - 28161453
Alignment:
Q  594 gtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||| ||| ||| ||||| || ||||||||||| | ||||||||||||||||||||    
T  28161397 gtattctttttgacactttgtctatgcaggaattgacttatactacaatcttaaaca 28161453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 28185239 - 28185295
Alignment:
Q  594 gtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||| ||| ||| ||||| || ||||||||||| | ||||||||||||||||||||    
T  28185239 gtattctttttgacactttgtctatgcaggaattgacttatactacaatcttaaaca 28185295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 26279541 - 26279411
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       
T  26279541 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattgtgcacttatactat 26279442  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  26279441 taattttaaatttaattttttaataacgtat 26279411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 22204919 - 22204789
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||       
T  22204919 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacagtgtgcacttatactat 22204820  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  22204819 taattttaaatttaattttttaataacgtat 22204789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 22229844 - 22229950
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||   ||||||||||||||||||||||||    
T  22229844 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacagtgtgcacttatactattaattttaaatttaattttttaat 22229943  T
Q  244 aacgtat 250  Q
    |||||||    
T  22229944 aacgtat 22229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 25444113 - 25444232
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||   ||||||||||||||||||||||||    
T  25444113 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtccacttatactattaattttaaatttaattttttaat 25444212  T
Q  244 aacgtattgtatccgtatcg 263  Q
    ||||||| | | ||||||||    
T  25444213 aacgtatcgaagccgtatcg 25444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 40819526 - 40819397
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||       
T  40819526 aaaaatatgtaattgtcacttgttttgatca-tttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactat 40819428  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  40819427 taattttaaatttaattttttaataacgtat 40819397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 22293350 - 22293455
Alignment:
Q  148 tgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaata 244  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  22293350 tgatcattttcattaacttgaatgtttatttattatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaata 22293449  T
Q  245 acgtat 250  Q
    ||||||    
T  22293450 acgtat 22293455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 45281320 - 45281428
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||   ||||||||||||||||||||||||    
T  45281320 ttgatcattttcattaatgtgaatgttagtttattatcatttttaattatgtttatacactatgcacttatactattaattttaaatttaattttttaat 45281419  T
Q  244 aacgtattg 252  Q
    ||| |||||    
T  45281420 aacatattg 45281428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 30948065 - 30948159
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaatttt 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||    
T  30948065 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaatttt 30948159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 128 - 263
Target Start/End: Complemental strand, 19927850 - 19927708
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||       
T  19927850 aaaaatatgtaattgtcacttgttttgatca-tttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtacacttatactat 19927752  T
Q  220 taattttaaatttaattttttaataacgtattgtatccgtatcg 263  Q
    ||||||||||||||||||||||| ||||||| |  |||||||||    
T  19927751 taattttaaatttaattttttaaaaacgtatcgagtccgtatcg 19927708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 15042833 - 15042727
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||| |||||||||||   || ||||||||||||||||| |||    
T  15042833 ttgatcattttcatttacgtaaatgtttgtttattatcatttttagttatgtctatacattgtgcacttatactattagttttaaatttaatttttgaat 15042734  T
Q  244 aacgtat 250  Q
    |||||||    
T  15042733 aacgtat 15042727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 15043226 - 15043192
Alignment:
Q  42 gatacttctgtcttacatatttccttttaataaaa 76  Q
    |||||||||||||||||||||||||||||| ||||    
T  15043226 gatacttctgtcttacatatttccttttaaaaaaa 15043192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 22205297 - 22205248
Alignment:
Q  19 cggctaatttatatttcgcaacggatacttctgtcttacatatttccttt 68  Q
    ||||||| ||||| ||||  || |||||||||||||||||||||||||||    
T  22205297 cggctaacttatacttcgacaccgatacttctgtcttacatatttccttt 22205248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 22229442 - 22229491
Alignment:
Q  19 cggctaatttatatttcgcaacggatacttctgtcttacatatttccttt 68  Q
    ||||||| ||||| ||||  || |||||||||||||||||||||||||||    
T  22229442 cggctaacttatacttcgacaccgatacttctgtcttacatatttccttt 22229491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 17630756 - 17630624
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||       
T  17630756 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactat 17630657  T
Q  220 taattttaaatttaattttttaataacgtattg 252  Q
    |||||||||||||||||||||||||||||||||    
T  17630656 taattttaaatttaattttttaataacgtattg 17630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 10861379 - 10861273
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  10861379 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 10861280  T
Q  244 aacgtat 250  Q
    |||||||    
T  10861279 aacgtat 10861273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 17068681 - 17068787
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  17068681 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 17068780  T
Q  244 aacgtat 250  Q
    |||||||    
T  17068781 aacgtat 17068787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 17579616 - 17579486
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||       
T  17579616 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactat 17579517  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  17579516 taattttaaatttaattttttaataacgtat 17579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 20289845 - 20289951
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  20289845 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 20289944  T
Q  244 aacgtat 250  Q
    |||||||    
T  20289945 aacgtat 20289951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 21076475 - 21076581
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  21076475 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 21076574  T
Q  244 aacgtat 250  Q
    |||||||    
T  21076575 aacgtat 21076581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 29055071 - 29055177
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  29055071 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattatgcacttatactattaattttaaatttaattttttaat 29055170  T
Q  244 aacgtat 250  Q
    |||||||    
T  29055171 aacgtat 29055177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 34964342 - 34964212
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||       
T  34964342 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactat 34964243  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||| ||||||||||||||    
T  34964242 taattttaaatttaatattttaataacgtat 34964212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 44718169 - 44718039
Alignment:
Q  128 aaaaatatgtaattctcacttg-----atcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatactaa 222  Q
    |||||||||||||| |||||||     |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  44718169 aaaaatatgtaattgtcacttgttctgatcatttttatttatgtaaatgtttgtttattatcatttttagttatgtttatacattgtacacttatactaa 44718070  T
Q  223 ---ttttaaatttaattttttaataacgtat 250  Q
       ||||||||||||| ||||||||||||||    
T  44718069 tagttttaaatttaatcttttaataacgtat 44718039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 3046365 - 3046238
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||||||||||||||||||| |||| ||||||||||||||||||||   ||||||||| |||||||||||       
T  3046365 aaaaatatgtaattatcacttgttttgatcattttcattaatgtgaacgtttttttattatcatttttagtta---ttatacattgtgcacttatactat 3046269  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  3046268 taattttaaatttaattttttaataacgtat 3046238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 37645 - 37515
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||       
T  37645 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactat 37546  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  37545 taattttaaatttaattttttaataacgtat 37515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 6666202 - 6666308
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||| ||||||||||||||||||||    
T  6666202 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacactctgcacttatactattaagtttaaatttaattttttaat 6666301  T
Q  244 aacgtat 250  Q
    |||||||    
T  6666302 aacgtat 6666308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 8871750 - 8871856
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  8871750 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaattttaaatttaattttttaat 8871849  T
Q  244 aacgtat 250  Q
    |||||||    
T  8871850 aacgtat 8871856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 13854289 - 13854159
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||       
T  13854289 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatctttatacattgtgcacttatactat 13854190  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    |||||||||||||||||||||||||||||||    
T  13854189 taattttaaatttaattttttaataacgtat 13854159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 36606647 - 36606753
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||   ||||||||||||||||||||||||    
T  36606647 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgggcacttatactattaattttaaatttaattttttaat 36606746  T
Q  244 aacgtat 250  Q
    |||||||    
T  36606747 aacgtat 36606753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 32659427 - 32659539
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||| |   || ||||||   ||||||||||||||||||||||||    
T  32659427 ttgattatttttattaatgtgaaagtttgtttaatatcatttttagttatgtttatacactacacatttatactgttaattttaaatttaattttttaat 32659526  T
Q  244 aacgtattgtatc 256  Q
    || |||| |||||    
T  32659527 aatgtatcgtatc 32659539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 28063854 - 28063917
Alignment:
Q  179 attatcatttttagttatgtttatacattctgcact--tatactaattttaaatttaatttttt 240  Q
    ||||||||||||||||||||||||| ||| |||| |  |||||| | |||||||||||||||||    
T  28063854 attatcatttttagttatgtttatatattgtgcatttatatacttaatttaaatttaatttttt 28063917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 3e-40; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 14313981 - 14313851
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       
T  14313981 aaaaatatgtaattgtcacttgttttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattgtgcacttatactat 14313882  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    ||||| |||||||||||||||||||||||||    
T  14313881 taattctaaatttaattttttaataacgtat 14313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 14811782 - 14811888
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||| |||||||||| |||||||||    
T  14811782 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatactattaactttaaatttatttttttaat 14811881  T
Q  244 aacgtat 250  Q
    |||||||    
T  14811882 aacgtat 14811888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 13043395 - 13043294
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatacta---attttaaatttaattttttaat 243  Q
    |||||||||||||||||||||    |||||||||||||||||||| |||| |||||||||| |||| ||||||||   ||||||||||||||||||||||    
T  13043395 ttgatcattttcattaatgtg----tttgtttattatcatttttaattatatttatacattgtgca-ttatactattaattttaaatttaattttttaat 13043301  T
Q  244 aacgtat 250  Q
    |||||||    
T  13043300 aacgtat 13043294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 443 - 530
Target Start/End: Original strand, 22392460 - 22392547
Alignment:
Q  443 aacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagc 530  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||| || ||||||    
T  22392460 aacaactacttaaaaatattctgcaactaatttacattttcatgctacgcaatcagttggagggttcaacgtcagaaaaacctgtagc 22392547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 547 - 627
Target Start/End: Original strand, 22392591 - 22392671
Alignment:
Q  547 atacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaatt 627  Q
    |||||||||||||||  |||||||||||||||||||||||||| | ||||||  |||||| |||||| |||||||||||||    
T  22392591 atacaagtcattgatcataaacaaaaggcatttcctctatttttcttgtattcattctgacacttttccaatgcaggaatt 22392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 22394322 - 22394408
Alignment:
Q  564 taaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||||||  |||||| |  ||||| | |  || || |||||||||||| |||| ||||||||||||||||||||||    
T  22394322 taaacaaaaggcatttcccttattttcctagtattctgttggacacattttcaatgcagtaattgaattatactacaatcttaaaca 22394408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 9e-38; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 21112602 - 21112708
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||   ||||||||||||||||||||||||    
T  21112602 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgtacttatactattaattttaaatttaattttttaat 21112701  T
Q  244 aacgtat 250  Q
    |||||||    
T  21112702 aacgtat 21112708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 1413972 - 1413862
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcactta---tactaattttaaa--tttaatttttta 241  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||   || ||||||||||  ||||||||||||    
T  1413972 ttgatcattttcattagtgtgaatgtttgtttattatcatttttagttatgtttatacattgtgcacttatattattaattttaaaattttaatttttta 1413873  T
Q  242 ataacgtattg 252  Q
    |||||||||||    
T  1413872 ataacgtattg 1413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 8862537 - 8862642
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatacta---attttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||   ||||||||||||| ||||||||    
T  8862537 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatatttatacattgtgcacttatactattcattttaaatttaa-tttttaat 8862635  T
Q  244 aacgtat 250  Q
    |||||||    
T  8862636 aacgtat 8862642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 250
Target Start/End: Complemental strand, 9149801 - 9149671
Alignment:
Q  128 aaaaatatgtaattctcac-----ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac--- 219  Q
    |||||||||||||| ||||     |||||||||||||||||  |||||||||||||||||||||| ||  |||| | |||||||| ||||| |||||       
T  9149801 aaaaatatgtaattgtcacttgttttgatcattttcattaacctgaatgtttgtttattatcattattcattatatgtatacattgtgcacgtatactgt 9149702  T
Q  220 taattttaaatttaattttttaataacgtat 250  Q
    || ||||||||||||||||||||||| ||||    
T  9149701 tagttttaaatttaattttttaataatgtat 9149671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 34752401 - 34752507
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||||||| ||| ||| |  |||| |||||   ||||||||||| |||| |||||||    
T  34752401 ttgatcatttttattaatgttaatgtttatttattatcatttttagttatgattacacactgggcacatatactattaattttaaatataatcttttaat 34752500  T
Q  244 aacgtat 250  Q
    |||||||    
T  34752501 aacgtat 34752507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 3365966 - 3366074
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| | |||||||||||   ||||||||||||||| ||||||||    
T  3365966 ttgatcattttcattaatgtgaatgtttatttattatcatttttagctatgtttatacactgtgcacttatactattaattttaaatttaactttttaat 3366065  T
Q  244 aacgtattg 252  Q
    |||||||||    
T  3366066 aacgtattg 3366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 22150251 - 22150136
Alignment:
Q  151 tcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaataacg 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||   || ||||||||||||||||||||||| |    
T  22150251 tcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatatattgtgcatttatactattatttttaaatttaattttttaataatg 22150152  T
Q  248 tattgtatccgtatcg 263  Q
    ||| |  |||||||||    
T  22150151 tatcgagtccgtatcg 22150136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 1608577 - 1608509
Alignment:
Q  185 atttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaataacgtat 250  Q
    ||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||    
T  1608577 atttttagttatgtttatacattttgcacttatactattaattttaaatttaattttttaataacgtat 1608509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 23205757 - 23205698
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacat 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  23205757 ttgatcattttcattaatgtgaatgttagtttattatcatttttaattatgtttacacat 23205698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 22150648 - 22150619
Alignment:
Q  42 gatacttctgtcttacatatttccttttaa 71  Q
    ||||||||||||||||||||||||||||||    
T  22150648 gatacttctgtcttacatatttccttttaa 22150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 26261686 - 26261793
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taatttt-aaatttaattttttaa 242  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||   ||||||| ||||||||||||||||    
T  26261686 ttgatcattttcatttatgtgaatgtttgtttattatcattttaagttatgtttatacattgtgcacttatactgttaattttaaaatttaattttttaa 26261785  T
Q  243 taacgtat 250  Q
    ||||||||    
T  26261786 taacgtat 26261793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 32761035 - 32761141
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatac---taattttaaatttaattttttaat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||   || ||||||||||||||||||||     
T  32761035 ttgatcattttcattaatgtgaatgtttgtttattatcatttttaattatgttcatatattgtgcacttatactattagttttaaatttaattttttaag 32761134  T
Q  244 aacgtat 250  Q
    |||||||    
T  32761135 aacgtat 32761141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 54260621 - 54260695
Alignment:
Q  147 ttgatcattttcattaatgtgaatgtttgtttattatcatttttagttatgtttatacattctgcacttatacta 221  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  54260621 ttgatcattttcattaatgtgaatgtttgtttatcatcatttttagttatgtttatacattgtgcacttatacta 54260695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 51161612 - 51161683
Alignment:
Q  179 attatcatttttagttatgtttatacattctgcactta---tactaattttaaatttaatttt-ttaataac 246  Q
    ||||||||||||||||||||||||| ||| ||||||||   || || |||||||||||||||| ||||||||    
T  51161612 attatcatttttagttatgtttatatattgtgcacttatattattagttttaaatttaattttcttaataac 51161683  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 26261157 - 26261193
Alignment:
Q  45 acttctgtcttacatatttccttttaataaaagaata 81  Q
    ||||||||||||||||||||||||||| |||||||||    
T  26261157 acttctgtcttacatatttccttttaaaaaaagaata 26261193  T

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Target: scaffold1142 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold1142
Description:

Target: scaffold1142; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 424 - 520
Target Start/End: Original strand, 1304 - 1400
Alignment:
Q  424 agaaaataaattttaatggaacaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaa 520  Q
    ||||||||||||||| |  ||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| | |||||||    
T  1304 agaaaataaattttactttaactactacttaaaaatatgctgcaactaatttacatttttatggtatgcaattagttggagggctcagcatcagaaa 1400  T

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Target: scaffold1142; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 611 - 650
Target Start/End: Original strand, 1518 - 1557
Alignment:
Q  611 ttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  1518 ttttcaatgcaggaattgaaatatactacaatcttaaaca 1557  T

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Target: scaffold0043 (Bit Score: 56; Significance: 7e-23; HSPs: 4)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 444 - 547
Target Start/End: Complemental strand, 53950 - 53847
Alignment:
Q  444 acaactacttaataatatgctgcaactaatttacattttcatgttatgcaattagttggagggttcaccgtcagaaagacttgtagcagaatctttgtcc 543  Q
    |||||||||||| |||||  ||||||||||||||||||||||| ||||| || |||||||||||||| || |||||| || |||||| |||||||||||     
T  53950 acaactacttaaaaatattgtgcaactaatttacattttcatgctatgctatcagttggagggttcaacgccagaaaaacctgtagcggaatctttgtct 53851  T
Q  544 acca 547  Q
    ||||    
T  53850 acca 53847  T

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Target: scaffold0043; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 317 - 402
Target Start/End: Complemental strand, 54097 - 54012
Alignment:
Q  317 catttacaaggagaaattgatgccagcatcaaaccttttcatggaaataataatgtaatatagcagcaccacattgtgcatataaa 402  Q
    |||||||| |||||||||||| |   ||||||||||| |||||||||| | ||||||||| || ||||||||||||||||||||||    
T  54097 catttacatggagaaattgatacgtccatcaaaccttctcatggaaatgacaatgtaatacagaagcaccacattgtgcatataaa 54012  T

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Target: scaffold0043; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 547 - 635
Target Start/End: Complemental strand, 53820 - 53732
Alignment:
Q  547 atacaagtcattgatagtaaacaaaaggcatttcctctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattata 635  Q
    |||||||||||||||  |||||||||||||||| |||||||||||   ||||  |||| | |||||| ||||||||||||| |||||||    
T  53820 atacaagtcattgatcataaacaaaaggcattttctctattttgctcatattcattcttatacttttacaatgcaggaattgaattata 53732  T

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Target: scaffold0043; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 611 - 650
Target Start/End: Complemental strand, 52037 - 51998
Alignment:
Q  611 ttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  52037 ttttcaatgcagtaattgaattatactacaatcttaaaca 51998  T

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Target: scaffold0257 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 18593 - 18680
Alignment:
Q  564 taaacaaaaggcatttcc-tctattttgcctgtattttttctgaaactttttcaatgcaggaattaaattatactacaatcttaaaca 650  Q
    |||||||||||||||||| ||  ||||||  | ||| ||| ||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  18593 taaacaaaaggcatttccctcatttttgctagcattctttttgacactttgtcaatgcaggaattgaattatactacaatcttaaaca 18680  T

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