View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16447_low_6 (Length: 333)
Name: NF16447_low_6
Description: NF16447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16447_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 37663430 - 37663746
Alignment:
| Q |
1 |
tgtgttagggaaaagggagtaatatagagcttgaacaaatttgtcaaatggattagcgcacctctttgatccaaatggaatgttcgatattgaaagcttg |
100 |
Q |
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| T |
37663430 |
tgtgttagggaaaagggagtaatatagagcttgaacaaatttgtcaaatggattagcgcacctttttgatccaaatggaatgttcgatattgaaagcttg |
37663529 |
T |
|
| Q |
101 |
tcaatatcgctaaatgtcagacccttggctgctggtgcttccaaagtttttccagtccagttaataggaaccaaaaccataaaagccagtagggtagttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37663530 |
tcaatatcgctaaatgtcagacccttggctgctggtgcttccaaagtttttccagtccagttaatgggaaccaaaaccataaaagccagtagggtagttg |
37663629 |
T |
|
| Q |
201 |
gggcaaatattttgacgctgtacatgagtattcccatcagaaaaacaaaataactaaatattagaaaacagaaagttttcaaactgcagttgcgaacact |
300 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37663630 |
gggcaaatattttgacactgtacatgagtattcccatcagaaaaacaaaataactaaatattagaaaacagaaagttttcaaactgcagttgcgaacact |
37663729 |
T |
|
| Q |
301 |
caaatcttgacaataat |
317 |
Q |
| |
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||||||||||||||||| |
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| T |
37663730 |
caaatcttgacaataat |
37663746 |
T |
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