View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16452_high_17 (Length: 301)

Name: NF16452_high_17
Description: NF16452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16452_high_17
NF16452_high_17
[»] chr3 (20 HSPs)
chr3 (103-220)||(26403558-26403679)
chr3 (12-104)||(43207449-43207542)
chr3 (13-102)||(53507094-53507183)
chr3 (13-103)||(44708281-44708372)
chr3 (13-102)||(50939445-50939534)
chr3 (12-102)||(48156942-48157034)
chr3 (13-102)||(34290849-34290940)
chr3 (12-103)||(9878896-9878986)
chr3 (13-85)||(54407368-54407439)
chr3 (251-301)||(26403477-26403527)
chr3 (37-103)||(48720530-48720596)
chr3 (36-93)||(47467591-47467648)
chr3 (36-87)||(50258733-50258784)
chr3 (38-88)||(36605861-36605911)
chr3 (38-87)||(27078819-27078868)
chr3 (38-87)||(27084616-27084665)
chr3 (38-87)||(36716276-36716325)
chr3 (38-87)||(38681348-38681397)
chr3 (38-87)||(54619454-54619503)
chr3 (51-87)||(3954866-3954902)
[»] chr6 (13 HSPs)
chr6 (12-104)||(20711927-20712020)
chr6 (13-104)||(17353757-17353848)
chr6 (12-87)||(27788897-27788972)
chr6 (13-104)||(235435-235527)
chr6 (13-87)||(19986982-19987056)
chr6 (13-103)||(28075587-28075678)
chr6 (36-90)||(30832666-30832720)
chr6 (37-87)||(23070889-23070939)
chr6 (38-87)||(11081684-11081733)
chr6 (38-87)||(13727650-13727699)
chr6 (26-87)||(19741212-19741273)
chr6 (51-87)||(21280349-21280385)
chr6 (51-87)||(27314778-27314814)
[»] chr8 (10 HSPs)
chr8 (13-104)||(42600582-42600674)
chr8 (12-87)||(23798470-23798545)
chr8 (13-87)||(23606831-23606905)
chr8 (13-87)||(10917210-10917283)
chr8 (11-87)||(45472207-45472282)
chr8 (36-87)||(20003875-20003926)
chr8 (38-87)||(2952473-2952522)
chr8 (38-87)||(3048774-3048823)
chr8 (38-87)||(5860996-5861045)
chr8 (38-86)||(30883127-30883175)
[»] chr1 (15 HSPs)
chr1 (13-102)||(40502000-40502090)
chr1 (13-102)||(13913693-13913782)
chr1 (12-103)||(9173231-9173322)
chr1 (13-90)||(19955544-19955620)
chr1 (13-102)||(17168769-17168857)
chr1 (13-87)||(27559463-27559538)
chr1 (13-103)||(44895466-44895557)
chr1 (12-87)||(1367086-1367161)
chr1 (13-105)||(51607648-51607742)
chr1 (12-87)||(23181727-23181801)
chr1 (36-87)||(14146221-14146272)
chr1 (54-87)||(5027991-5028024)
chr1 (38-87)||(27906949-27906998)
chr1 (38-87)||(44655555-44655604)
chr1 (51-87)||(41697293-41697329)
[»] chr7 (13 HSPs)
chr7 (12-102)||(47985178-47985268)
chr7 (13-87)||(24525894-24525968)
chr7 (13-87)||(48984054-48984127)
chr7 (12-103)||(19691896-19691988)
chr7 (13-102)||(20091491-20091579)
chr7 (12-103)||(38415084-38415175)
chr7 (13-101)||(25010254-25010342)
chr7 (13-103)||(10329619-10329710)
chr7 (13-87)||(23551281-23551355)
chr7 (37-87)||(28749597-28749647)
chr7 (54-105)||(10027615-10027667)
chr7 (51-87)||(12596443-12596479)
chr7 (38-93)||(18777019-18777075)
[»] chr2 (12 HSPs)
chr2 (12-102)||(26715931-26716021)
chr2 (13-102)||(27506951-27507041)
chr2 (13-104)||(24410234-24410325)
chr2 (12-87)||(9045848-9045922)
chr2 (13-82)||(8327488-8327556)
chr2 (17-102)||(10762779-10762865)
chr2 (38-87)||(4505695-4505744)
chr2 (36-87)||(3952915-3952966)
chr2 (38-87)||(3155019-3155068)
chr2 (56-93)||(5952949-5952986)
chr2 (38-87)||(6964808-6964857)
chr2 (55-106)||(52968-53020)
[»] chr4 (24 HSPs)
chr4 (13-87)||(24969258-24969332)
chr4 (13-99)||(40089328-40089413)
chr4 (12-87)||(16844843-16844919)
chr4 (12-87)||(32128408-32128483)
chr4 (13-99)||(54083454-54083541)
chr4 (37-102)||(38352489-38352554)
chr4 (12-106)||(2790949-2791044)
chr4 (13-87)||(37777434-37777509)
chr4 (13-102)||(19498313-19498402)
chr4 (12-85)||(16882603-16882675)
chr4 (20-84)||(34027407-34027471)
chr4 (28-86)||(35463958-35464016)
chr4 (54-102)||(54779441-54779490)
chr4 (11-87)||(35780531-35780606)
chr4 (38-90)||(38209842-38209894)
chr4 (36-87)||(1105447-1105498)
chr4 (16-87)||(10431421-10431492)
chr4 (51-93)||(9579483-9579525)
chr4 (51-93)||(9585178-9585220)
chr4 (37-87)||(45560704-45560754)
chr4 (38-87)||(55255096-55255145)
chr4 (51-87)||(5128997-5129033)
chr4 (27-87)||(17679233-17679293)
chr4 (27-87)||(47127997-47128057)
[»] chr5 (14 HSPs)
chr5 (16-87)||(16199005-16199076)
chr5 (13-102)||(27923885-27923974)
chr5 (12-103)||(38869569-38869660)
chr5 (13-102)||(7670728-7670816)
chr5 (13-84)||(9364113-9364183)
chr5 (13-102)||(40389743-40389831)
chr5 (12-87)||(16799532-16799606)
chr5 (36-87)||(15480228-15480279)
chr5 (36-87)||(19523109-19523160)
chr5 (38-87)||(34756615-34756664)
chr5 (51-87)||(22987481-22987517)
chr5 (19-87)||(30853282-30853350)
chr5 (51-87)||(31881604-31881640)
chr5 (38-102)||(34855925-34855989)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-104)||(4147-4238)
[»] scaffold0039 (1 HSPs)
scaffold0039 (28-102)||(106379-106454)
[»] scaffold0070 (1 HSPs)
scaffold0070 (51-87)||(1027-1063)


Alignment Details
Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 26403679 - 26403558
Alignment:
Q  103 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataa----atttattttaatctttgaattaaaagtttattaaatttatgat 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||    
T  26403679 atcaggtacatagttgataaagctaataacttgaaacccgaacgactagataattaaatttattttaatctttgaattaaaagtttattaaatttattat 26403580  T
Q  199 actagttttttcaggttttact 220  Q
    ||||||||||||||||||||||    
T  26403579 actagttttttcaggttttact 26403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 43207449 - 43207542
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 104  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  43207449 atactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcaggaccgggcctgat 43207542  T

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Target: chr3; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 53507094 - 53507183
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  53507094 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 53507183  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 44708372 - 44708281
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  44708372 tactagtggatattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagagccgggcctga 44708281  T

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Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 50939445 - 50939534
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctg 102  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  50939445 tactggtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggacgggcctg 50939534  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 48157034 - 48156942
Alignment:
Q  12 atactagtgggtattaaaaac-aaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||||  ||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  48157034 atactagtgggtattaaaaaataaaatttaggcccatgattgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 48156942  T

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Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 34290849 - 34290940
Alignment:
Q  13 tactagtgggtattaaaaacaaac-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||| ||||||||| |||  |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34290849 tactagtggatattaaaaaaaaaaattgaggcccatgcctgagggaggcccaactctgttgagctgtttgcaccccctcagggtcgggcctg 34290940  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 9878896 - 9878986
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    |||||||||||||||||||| ||  ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  9878896 atactagtgggtattaaaaaaaa--ttgaggcccatgattaagggaggcccagctctgttgagctgtttgcaccccctcagggccggacctga 9878986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 54407368 - 54407439
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 85  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  54407368 tactagtaggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccaactctgttgagctgtttgcacc 54407439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 26403527 - 26403477
Alignment:
Q  251 ttttatttccaccacacttagccctatggattaaaaattgtgattctctat 301  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26403527 ttttatttccacctcacttagccctatggattaaaaattgtgattctctat 26403477  T

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Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 48720530 - 48720596
Alignment:
Q  37 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctga 103  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||    
T  48720530 ttgaggcccatgactgagggaagctcagctctgttgagctgtttgcacccgtcagggccgtgcctga 48720596  T

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Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 47467648 - 47467591
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcaggg 93  Q
    ||||||||||||   |||||||||| ||||||  ||||||||||||||||||||||||    
T  47467648 cttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccctcaggg 47467591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 50258733 - 50258784
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  50258733 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccc 50258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 36605911 - 36605861
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccct 88  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccct 36605861  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 27078819 - 27078868
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27078868  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 27084616 - 27084665
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 36716276 - 36716325
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 36716325  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 38681348 - 38681397
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 38681397  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 54619454 - 54619503
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 54619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 3954866 - 3954902
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  3954866 tgagggaggcccagctcgtttgagctgtttgcacccc 3954902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 20711927 - 20712020
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgat 104  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20711927 atactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacctcctcagggccgggcctgat 20712020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 17353848 - 17353757
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 104  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  17353848 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctgat 17353757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 27788897 - 27788972
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27788897 atactagtgggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 27788972  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 235435 - 235527
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 104  Q
    ||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  235435 tactagtgggtattaaaaaaaaaattaaggtccatgactgagggaggcccagctctgttaagctgtttgcaccccctcagggacgggcctgat 235527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 19987056 - 19986982
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  19987056 tactagtgggtattaaaaaaaaatttgaggcccataattgagggaggcccagctctgttgagctgtttgcacccc 19986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 28075678 - 28075587
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    ||||||||||||||||||| ||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| |||||||| | |||||||||    
T  28075678 tactagtgggtattaaaaaaaaaattgaagcccatgactgaaggaagcctagctctgttgagctgtttgcaccccctcagagccgggcctga 28075587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 30832666 - 30832720
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 90  Q
    ||||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  30832666 cttgaggcccatccttgagggaggcccagctcatttgagctgtttgcacccctca 30832720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 23070889 - 23070939
Alignment:
Q  37 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 23070939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 11081684 - 11081733
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||| || ||||||||| |||||  ||||||||||||||||||    
T  11081684 tgaggcccatgccttagggaggcctagctccattgagctgtttgcacccc 11081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 13727650 - 13727699
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 13727699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 19741212 - 19741273
Alignment:
Q  26 taaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||| ||| |||||| ||||   |||||||||||||||||  ||||||||||||||||||    
T  19741212 taaaaaaaaaattgaggtccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19741273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21280385 - 21280349
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  21280385 tgagggaggcccagctcgtttgagctgtttgcacccc 21280349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27314778 - 27314814
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  27314778 tgagggaggcccagctcgtttgagctgtttgcacccc 27314814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 42600674 - 42600582
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 104  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  42600674 tactagtgggtattaaaaataaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctgat 42600582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 23798470 - 23798545
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  23798470 atactagtgggtattaaaaaaaaatttgaggcccatgactgagggaggcccagctttgttgagctgttcgcacccc 23798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 23606831 - 23606905
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23606831 tactagtgggtattaaaagaaaatttgaggcccatgactgagggaggcccaactctgttgagctgtttgcacccc 23606905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 10917283 - 10917210
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10917283 tactagtgggtattaaaaaaaaa-ttgtggcccatgagtgagggaggcccagctctgttgagctgtttgcacccc 10917210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 45472282 - 45472207
Alignment:
Q  11 tatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||| ||||||| ||||| ||| |||||||||||   || ||| |||||||||| |||||||||||||||||||    
T  45472282 tatactaatgggtataaaaaaaaaa-ttgaggcccatccttgggggtggcccagctcggttgagctgtttgcacccc 45472207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 20003875 - 20003926
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  20003875 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 20003926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 2952473 - 2952522
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 2952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 3048774 - 3048823
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3048823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 5860996 - 5861045
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 5861045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 30883175 - 30883127
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 86  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||    
T  30883175 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccc 30883127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 40502000 - 40502090
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  40502000 tactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 40502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 13913693 - 13913782
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  13913693 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 13913782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 9173231 - 9173322
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  9173231 atactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccaactctgttgagctgtttgcaccccctcagggccgggcctga 9173322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 19955620 - 19955544
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 90  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19955620 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggtccagctctgttgagctgtttgcacccctca 19955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 17168857 - 17168769
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  17168857 tactagtgggtattaaaaaaaa--ttgaggcccatgactgagggaggccaagctctattgagctgtttgcatcccctcagggtcgggcctg 17168769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 27559538 - 27559463
Alignment:
Q  13 tactagtgggtattaaaaacaaac-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27559538 tactagtgggtattaaaaaaaaaaattgaggcccatgactgagggaggtccagctctgttgagctgtttgcacccc 27559463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 44895557 - 44895466
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    ||||||||| ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  44895557 tactagtggatattaaaaaaaaaaatgtggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgagcctga 44895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 1367086 - 1367161
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1367086 atactagtgggtattaaaattttttttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 1367161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 51607648 - 51607742
Alignment:
Q  13 tactagtgggtattaaaaacaaact-tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgatc 105  Q
    ||||||||| ||||||||| |||   |||||||||||| ||||| |||||||||||| |||||||||||||||| ||||| |  |||||||||||    
T  51607648 tactagtggatattaaaaaaaaaaaatgaggcccatgattgaggaaggcccagctctattgagctgtttgcaccacctcatgaccgggcctgatc 51607742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 23181801 - 23181727
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||| ||||||| ||||| ||| ||||||||||| | || ||| |||||||||| |||||||||||||||||||    
T  23181801 atactaatgggtataaaaaa-aaatttgaggcccatcattgggggtggcccagctcggttgagctgtttgcacccc 23181727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 14146272 - 14146221
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  14146272 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 14146221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 5027991 - 5028024
Alignment:
Q  54 gggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||| |||||||||||||||||||    
T  5027991 gggaggcccagctcggttgagctgtttgcacccc 5028024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 27906949 - 27906998
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 27906998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 44655604 - 44655555
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 44655555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 41697293 - 41697329
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  41697293 tgagggaggcccagctcgtttgagctgtttgcacccc 41697329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 47985178 - 47985268
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  47985178 atactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 47985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24525894 - 24525968
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24525894 tactagtgggtattaaaaaaaaaattgaggcccatgactaagggaggcccagctctgttgagctgtttgcacccc 24525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 48984054 - 48984127
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48984054 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 48984127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 19691988 - 19691896
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccat-gactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    |||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19691988 atactagttggtattaaaaaaaaa-ttgaggcccattgactgagggaggcccagctctgttgagctgtttgcaccccctcagggtcgggcctga 19691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 20091491 - 20091579
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 102  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  20091491 tactggtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctattgagctgtttgcaccccccagggacgggcctg 20091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 38415084 - 38415175
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  38415084 atactagtgggtattaaaaa-aaatttgaggcccatgactaagggaggcccagctctgttgagctgtttgcatcccctcagagccgggcctga 38415175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 25010342 - 25010254
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcct 101  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  25010342 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccaactctgttgagctgtttgtaccccctcagggccgggcct 25010254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 10329619 - 10329710
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| || ||| ||||||| ||||||||| |||||||||  |||||||||    
T  10329619 tactagtgggtattaaaaaaaaaattgaggcccatgactgagggagacctagcgctgttgaactgtttgcaccccctcaggaccgggcctga 10329710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 23551281 - 23551355
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  23551281 tactagtgggtattaaaaaaaaaattgaggcccatgattgagggaggtccaactctattgagctgtttgcacccc 23551355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 28749647 - 28749597
Alignment:
Q  37 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 28749597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 10027667 - 10027615
Alignment:
Q  54 gggaggcccagctctgttgagctgtttgcacc-cctcagggtcgggcctgatc 105  Q
    ||||||||||||||||| |||||||||||||| || ||||| ||| |||||||    
T  10027667 gggaggcccagctctgtagagctgtttgcacctccccagggccggccctgatc 10027615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 12596443 - 12596479
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  12596443 tgagggaggcccagctcgtttgagctgtttgcacccc 12596479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 18777019 - 18777075
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc-cctcaggg 93  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||| ||||||||    
T  18777019 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacctcctcaggg 18777075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 26716021 - 26715931
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  26716021 atactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggccgggcctg 26715931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 27506951 - 27507041
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  27506951 tactaatgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacgggcctg 27507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 24410325 - 24410234
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgat 104  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  24410325 tactaatgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccccttagggacgggcctgat 24410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 9045922 - 9045848
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9045922 atactaatgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 9045848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 8327556 - 8327488
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 82  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8327556 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgc 8327488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 10762779 - 10762865
Alignment:
Q  17 agtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||    
T  10762779 agtgggtattaaaaaaaaaattgaggcccatgattgagggaagcccagctctgttgagctgtttgcatcccctcagggccggccctg 10762865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 4505744 - 4505695
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||| | |||||||||||||||||  ||||||||||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcacccc 4505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 3952966 - 3952915
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3952966 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3952915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 3155068 - 3155019
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 3155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 5952949 - 5952986
Alignment:
Q  56 gaggcccagctctgttgagctgtttgcacccctcaggg 93  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  5952949 gaggcccagctcgtttgagctgtttgcacccctcaggg 5952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 6964857 - 6964808
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 6964808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 52968 - 53020
Alignment:
Q  55 ggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgatca 106  Q
    ||||||||||||| || |||||| ||||| |||||||||||||| ||||||||    
T  52968 ggaggcccagctcagtagagctgcttgcaccccctcagggtcggccctgatca 53020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 24969332 - 24969258
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24969332 tactagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 24969258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 40089413 - 40089328
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggc 99  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  40089413 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcatggccgggc 40089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 16844919 - 16844843
Alignment:
Q  12 atactagtgggtatt-aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16844919 atactagtgggtatttaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 16844843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 32128483 - 32128408
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32128483 atactagtgggtattaaaaaaaaaattgaggtccataactgagggaggcccagctctgttgagctgtttgcacccc 32128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 54083454 - 54083541
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggc 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||    
T  54083454 tactagtgggtattaaaaaaaaaattgaggcccatgactgagggatgcccagctctattgagctgtttgcaccccctcagggacgggc 54083541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 38352489 - 38352554
Alignment:
Q  37 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 102  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38352489 ttgaggcccatgactaagggaggcccagctctgttgagctgtttgcacccctcagggccgggcctg 38352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 2790949 - 2791044
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctgatca 106  Q
    |||||||||||| || |||| ||| |||| | ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2790949 atactagtgggttttcaaaaaaaaattgacgtccatgactgagggagacccagctctgttgagctgtttgcaccccctcagagtcgggcctgatca 2791044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 37777434 - 37777509
Alignment:
Q  13 tactagtgggtattaaaaacaaac-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||||||||| |||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  37777434 tactagtgggtattaaaaaaaaaaattgaggcccatgattgagggaggtccagctctgttgagctgtttgcacccc 37777509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 19498402 - 19498313
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc-tcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||||||||| |||||||||| |||||||||| |||||| ||||||||    
T  19498402 tactagtgggtattaaaaaaaaa-ttgaggcccatgattgggggaggcccagcactgttgagctatttgcaccccgtcagggccgggcctg 19498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16882603 - 16882675
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 85  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  16882603 atactagtgggtattaaaaaaaaa-ttgaggctcatgactaagggaagcccagctctgttgagctgtttgcacc 16882675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 34027471 - 34027407
Alignment:
Q  20 gggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 84  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  34027471 gggtattaaaaaaaaaattgaggcccatgactgagggagacccagctctgttgagcagtttgcac 34027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 35464016 - 35463958
Alignment:
Q  28 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 86  Q
    |||| ||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  35464016 aaaaaaaaattgatgcccatggctgggggaggcccagctctgttgagctgtttgcaccc 35463958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 54779490 - 54779441
Alignment:
Q  54 gggaggcccagctctgttgagctgtttgcac-ccctcagggtcgggcctg 102  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  54779490 gggaggcccagctcggttgagctgtttgcactccctcagggccgggcctg 54779441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 35780531 - 35780606
Alignment:
Q  11 tatactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||| ||| ||||||||| ||| |||||||| ||   || |||||||||||||| |||||||||||||||||||    
T  35780531 tatactactggatattaaaaaaaaa-ttgaggcctatccgtgggggaggcccagctcggttgagctgtttgcacccc 35780606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 38209842 - 38209894
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctca 90  Q
    ||||||||||   |||||||||||||||||  |||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccctca 38209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 1105498 - 1105447
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  1105498 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 1105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 10431421 - 10431492
Alignment:
Q  16 tagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||| ||||| |   |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  10431421 tagtgggtataaaaaatatttttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 10431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 9579483 - 9579525
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 93  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9579483 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9579525  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 9585178 - 9585220
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccctcaggg 93  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  9585178 tgagggaggcccagctcgtttgagctgtttgcacgcctcaggg 9585220  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 45560704 - 45560754
Alignment:
Q  37 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctgtttgcacccc 45560754  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 55255145 - 55255096
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 55255096  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 5128997 - 5129033
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  5128997 tgagggaggcccagctcgtttgagctgtttgcacccc 5129033  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 17679293 - 17679233
Alignment:
Q  27 aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||| ||| |||||||||||   |||||||||| ||||||  ||||||||||||||||||    
T  17679293 aaaaataaaattgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccc 17679233  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 47128057 - 47127997
Alignment:
Q  27 aaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||| ||| |||||||||||   |||||||||||||||||  ||| ||||||||||||||    
T  47128057 aaaaaaaaaattgaggcccatccttgagggaggcccagctcgtttgggctgtttgcacccc 47127997  T

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Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 16199005 - 16199076
Alignment:
Q  16 tagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16199005 tagtgggtattaaaaaaaaaattgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 16199076  T

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Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 27923974 - 27923885
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  27923974 tactagtgggtattaaaaaaaaa-ttgaggcccatgactgagggaggtccagctctgttgagctgtttgcaccccctcagggacgggcctg 27923885  T

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Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 38869569 - 38869660
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgca-cccctcagggtcgggcctga 103  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || |||||||||    
T  38869569 atactagtgggtattaaaaa-aaatttgaggcccatgactgagggaggcccagctttgttgagctgtttgcaccccctcatggccgggcctga 38869660  T

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Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 7670816 - 7670728
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 102  Q
    ||||||||||| ||||||| ||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  7670816 tactagtgggtgttaaaaaaaaa-ttaagacccatgactgagggaggcccaactctgttgagctgtttgcacccctcagggccgggcctg 7670728  T

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Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 9364183 - 9364113
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 84  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9364183 tactagtggatattaaaaaaaaa-ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcac 9364113  T

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Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 40389743 - 40389831
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctg 102  Q
    ||||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  40389743 tactagtgggtattaaaaaaaa--ttgaggtccatgactgagggaggcccaggtctgttgagctgtttgcacccgctcagggccgggcctg 40389831  T

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Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 16799532 - 16799606
Alignment:
Q  12 atactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16799532 atactaatgggtgttaaaaaaaaa-ttgaggcccatgactgagggaggcctagctctattgagctgtttgcacccc 16799606  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 15480228 - 15480279
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  15480228 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 15480279  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 19523160 - 19523109
Alignment:
Q  36 cttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  19523160 cttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 19523109  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 34756615 - 34756664
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 34756664  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22987481 - 22987517
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  22987481 tgagggaggcccagctcgtttgagctgtttgcacccc 22987517  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 30853350 - 30853282
Alignment:
Q  19 tgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    ||||||| ||||| ||| |||||| ||||   ||| |||||||||||||  ||||||||||||||||||    
T  30853350 tgggtataaaaaaaaaaattgaggtccatccttgaaggaggcccagctcgtttgagctgtttgcacccc 30853282  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 31881604 - 31881640
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  31881604 tgagggaggcccagctcgtttgagctgtttgcacccc 31881640  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 34855989 - 34855925
Alignment:
Q  38 tgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccctcagggtcgggcctg 102  Q
    ||||||||||  || |||||||||||||||  || ||||||||||| |||| |||| ||||||||    
T  34855989 tgaggcccataccttagggaggcccagctccatttagctgtttgcatccctaagggccgggcctg 34855925  T

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Target: scaffold0027 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 4238 - 4147
Alignment:
Q  13 tactagtgggtattaaaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctgat 104  Q
    ||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  4238 tactagtgggtattaaaaaaaaa-ttgaggcccatgactggaggaggcccagctctgttgagctgtttgcaccctctcagggccggccctgat 4147  T

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Target: scaffold0039 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 106454 - 106379
Alignment:
Q  28 aaaacaaacttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc-ctcagggtcgggcctg 102  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  106454 aaaaaaaatttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccctctcagggccgggcctg 106379  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 1063 - 1027
Alignment:
Q  51 tgagggaggcccagctctgttgagctgtttgcacccc 87  Q
    |||||||||||||||||  ||||||||||||||||||    
T  1063 tgagggaggcccagctcgtttgagctgtttgcacccc 1027  T

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