View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16452_low_31 (Length: 227)
Name: NF16452_low_31
Description: NF16452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16452_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 7261174 - 7260975
Alignment:
| Q |
13 |
gagatgaagtcacaaaacttaaagttacctaagtagaatccgactcgttcttaagttagataaatataaatagaactgcactatgagggttagtaattta |
112 |
Q |
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| T |
7261174 |
gagataaagtcacaaaacttaaagttacctaagtagaatccgacactttcgtaagttacataaatataaatagaactgcactatgagggttagtaattta |
7261075 |
T |
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| Q |
113 |
tttatagtctttgaataatttgtttatggacttgacacataacactgatatcttcaaacttaaaggatacttgctgataaagtatcagcaactggatact |
212 |
Q |
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| T |
7261074 |
tttatagtctttgaataatttgtttatggacttgacacataacactgatatcttcaaacttaaaggatacttgctgataaagtatcagcaactggatact |
7260975 |
T |
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