View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16452_low_33 (Length: 219)

Name: NF16452_low_33
Description: NF16452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16452_low_33
NF16452_low_33
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-60)||(69482-69541)
scaffold0025 (1-59)||(73214-73272)
[»] chr8 (39 HSPs)
chr8 (1-60)||(14807836-14807895)
chr8 (1-60)||(33541579-33541638)
chr8 (1-58)||(608821-608878)
chr8 (1-57)||(37214382-37214438)
chr8 (1-60)||(1225251-1225310)
chr8 (1-60)||(27827071-27827130)
chr8 (1-60)||(27829382-27829441)
chr8 (1-60)||(28283410-28283469)
chr8 (1-60)||(32339394-32339453)
chr8 (1-54)||(30480694-30480747)
chr8 (1-57)||(15068069-15068125)
chr8 (1-61)||(26775285-26775345)
chr8 (1-60)||(5622929-5622988)
chr8 (1-60)||(15072795-15072854)
chr8 (1-60)||(22684847-22684906)
chr8 (1-60)||(27107088-27107147)
chr8 (1-60)||(27911099-27911158)
chr8 (1-60)||(27957518-27957577)
chr8 (1-60)||(28251758-28251817)
chr8 (1-60)||(43079687-43079746)
chr8 (1-54)||(3874101-3874154)
chr8 (1-58)||(41384831-41384888)
chr8 (1-60)||(13858675-13858734)
chr8 (1-60)||(14477361-14477420)
chr8 (1-60)||(15809304-15809362)
chr8 (1-60)||(18810793-18810852)
chr8 (1-60)||(24873372-24873431)
chr8 (1-60)||(35872574-35872633)
chr8 (1-60)||(36865623-36865682)
chr8 (1-60)||(43082058-43082117)
chr8 (5-58)||(41382760-41382813)
chr8 (1-60)||(4424103-4424162)
chr8 (1-60)||(14419382-14419441)
chr8 (1-58)||(5372369-5372426)
chr8 (1-53)||(44720935-44720987)
chr8 (1-60)||(15185901-15185960)
chr8 (1-52)||(25952613-25952664)
chr8 (1-47)||(18812980-18813026)
chr8 (1-47)||(43530213-43530259)
[»] chr7 (53 HSPs)
chr7 (1-60)||(24748633-24748692)
chr7 (1-60)||(44724618-44724677)
chr7 (1-60)||(443634-443693)
chr7 (1-60)||(13099667-13099726)
chr7 (1-60)||(18567652-18567711)
chr7 (1-60)||(31435238-31435297)
chr7 (1-60)||(38394025-38394084)
chr7 (1-60)||(43253708-43253766)
chr7 (1-60)||(48457692-48457751)
chr7 (1-58)||(21592334-21592391)
chr7 (1-53)||(21990196-21990248)
chr7 (1-60)||(42223196-42223256)
chr7 (1-60)||(35668-35727)
chr7 (1-60)||(44603-44662)
chr7 (1-60)||(1047115-1047174)
chr7 (1-60)||(1850020-1850079)
chr7 (1-60)||(7470213-7470272)
chr7 (1-60)||(7472171-7472230)
chr7 (1-60)||(20297401-20297460)
chr7 (1-60)||(20626077-20626136)
chr7 (1-60)||(20629968-20630027)
chr7 (1-60)||(20642387-20642446)
chr7 (1-60)||(21678105-21678164)
chr7 (1-60)||(21680066-21680125)
chr7 (1-60)||(25276180-25276239)
chr7 (1-60)||(28485605-28485664)
chr7 (1-60)||(40836933-40836992)
chr7 (1-60)||(42331190-42331249)
chr7 (1-58)||(24258504-24258561)
chr7 (1-60)||(4296125-4296185)
chr7 (1-60)||(9680858-9680918)
chr7 (1-60)||(11757268-11757328)
chr7 (1-60)||(20299498-20299558)
chr7 (1-60)||(26804608-26804670)
chr7 (1-60)||(37412318-37412378)
chr7 (1-60)||(1049486-1049545)
chr7 (1-60)||(3035760-3035819)
chr7 (1-60)||(3878616-3878675)
chr7 (1-60)||(7349464-7349523)
chr7 (1-60)||(11355297-11355356)
chr7 (1-60)||(18345580-18345639)
chr7 (1-60)||(20137300-20137359)
chr7 (1-60)||(22251733-22251792)
chr7 (1-60)||(25542569-25542628)
chr7 (1-60)||(27306421-27306479)
chr7 (1-60)||(39146178-39146237)
chr7 (2-60)||(40946367-40946425)
chr7 (1-60)||(9679098-9679157)
chr7 (1-60)||(7351843-7351902)
chr7 (1-60)||(27832824-27832883)
chr7 (1-60)||(31156102-31156161)
chr7 (1-60)||(28487592-28487651)
chr7 (14-60)||(24817555-24817600)
[»] chr6 (36 HSPs)
chr6 (1-60)||(1230440-1230499)
chr6 (1-60)||(3390443-3390502)
chr6 (1-60)||(11983220-11983279)
chr6 (1-60)||(13057258-13057317)
chr6 (1-60)||(15530313-15530372)
chr6 (1-60)||(15541331-15541390)
chr6 (1-60)||(28241512-28241571)
chr6 (1-60)||(3630055-3630114)
chr6 (1-60)||(4816422-4816481)
chr6 (1-60)||(9019990-9020049)
chr6 (1-56)||(13039822-13039877)
chr6 (1-60)||(14458956-14459015)
chr6 (1-60)||(14507366-14507425)
chr6 (1-60)||(25477338-25477397)
chr6 (1-56)||(30729019-30729074)
chr6 (1-60)||(30967265-30967324)
chr6 (1-60)||(1072068-1072127)
chr6 (1-60)||(2629076-2629135)
chr6 (1-60)||(3632129-3632188)
chr6 (1-60)||(12195706-12195765)
chr6 (1-60)||(15532872-15532931)
chr6 (1-60)||(19227599-19227658)
chr6 (1-60)||(20915547-20915606)
chr6 (1-59)||(32280061-32280119)
chr6 (1-54)||(30034794-30034847)
chr6 (1-60)||(3233921-3233981)
chr6 (5-60)||(12161752-12161805)
chr6 (1-60)||(32447506-32447566)
chr6 (1-60)||(19704760-19704819)
chr6 (9-60)||(22490704-22490755)
chr6 (1-60)||(26932753-26932812)
chr6 (1-60)||(26065050-26065106)
chr6 (1-60)||(26085019-26085075)
chr6 (25-60)||(8995543-8995578)
chr6 (1-60)||(13870613-13870672)
chr6 (19-60)||(17852606-17852647)
[»] chr5 (51 HSPs)
chr5 (1-60)||(17072912-17072971)
chr5 (1-60)||(21948055-21948114)
chr5 (1-60)||(31472804-31472863)
chr5 (1-60)||(36402519-36402578)
chr5 (1-60)||(658544-658603)
chr5 (1-60)||(1189800-1189859)
chr5 (1-60)||(4236658-4236717)
chr5 (1-60)||(6756523-6756582)
chr5 (1-60)||(12556114-12556173)
chr5 (1-60)||(18469040-18469099)
chr5 (1-60)||(18509509-18509568)
chr5 (1-60)||(18511403-18511462)
chr5 (1-60)||(18596674-18596733)
chr5 (1-60)||(25804054-25804113)
chr5 (1-60)||(25904132-25904191)
chr5 (1-60)||(25921664-25921723)
chr5 (1-60)||(26098442-26098501)
chr5 (1-60)||(27910479-27910538)
chr5 (1-60)||(39854512-39854571)
chr5 (1-60)||(40221551-40221610)
chr5 (3-59)||(10474516-10474572)
chr5 (1-60)||(2174948-2175007)
chr5 (1-60)||(6745098-6745156)
chr5 (1-60)||(10529290-10529349)
chr5 (1-60)||(16776187-16776246)
chr5 (1-60)||(20043079-20043138)
chr5 (1-60)||(20045039-20045098)
chr5 (1-60)||(26097762-26097821)
chr5 (1-60)||(31542764-31542823)
chr5 (1-60)||(31545109-31545168)
chr5 (1-60)||(34477245-34477304)
chr5 (1-60)||(34479610-34479669)
chr5 (6-60)||(2818532-2818586)
chr5 (1-58)||(16092391-16092448)
chr5 (1-60)||(39398184-39398243)
chr5 (1-60)||(18466713-18466772)
chr5 (1-60)||(21684642-21684701)
chr5 (1-60)||(27912565-27912624)
chr5 (1-60)||(31179562-31179621)
chr5 (1-60)||(31466169-31466228)
chr5 (1-60)||(34530857-34530916)
chr5 (1-60)||(38882135-38882194)
chr5 (2-60)||(17818682-17818740)
chr5 (1-59)||(37705971-37706029)
chr5 (14-58)||(21288795-21288839)
chr5 (1-60)||(15552274-15552333)
chr5 (1-60)||(2954445-2954505)
chr5 (7-55)||(20507659-20507707)
chr5 (1-60)||(6747335-6747393)
chr5 (1-43)||(695924-695966)
chr5 (2-60)||(24126885-24126943)
[»] chr4 (71 HSPs)
chr4 (1-60)||(26086167-26086226)
chr4 (1-60)||(40637157-40637216)
chr4 (1-60)||(3824761-3824820)
chr4 (1-60)||(5637656-5637715)
chr4 (1-60)||(9148336-9148395)
chr4 (1-60)||(14633402-14633461)
chr4 (1-60)||(22801053-22801112)
chr4 (1-60)||(22802925-22802984)
chr4 (1-60)||(24879072-24879131)
chr4 (5-60)||(24880534-24880589)
chr4 (1-60)||(33415679-33415737)
chr4 (1-60)||(37089562-37089621)
chr4 (1-60)||(48486402-48486461)
chr4 (1-60)||(38928368-38928428)
chr4 (1-60)||(5198503-5198562)
chr4 (1-60)||(8631610-8631669)
chr4 (1-60)||(11006428-11006487)
chr4 (1-60)||(11008757-11008816)
chr4 (1-60)||(11435038-11435097)
chr4 (1-60)||(14787622-14787681)
chr4 (1-60)||(22044581-22044640)
chr4 (1-60)||(24888879-24888938)
chr4 (1-60)||(27499128-27499187)
chr4 (1-60)||(38409288-38409347)
chr4 (1-60)||(40091606-40091665)
chr4 (1-60)||(44600029-44600088)
chr4 (1-60)||(47868484-47868543)
chr4 (1-60)||(52942637-52942696)
chr4 (1-60)||(56030527-56030586)
chr4 (1-58)||(19095967-19096025)
chr4 (7-60)||(5101080-5101133)
chr4 (1-60)||(31849789-31849849)
chr4 (1-60)||(36921684-36921744)
chr4 (1-60)||(2485063-2485122)
chr4 (1-60)||(3937400-3937459)
chr4 (1-60)||(16453392-16453451)
chr4 (1-60)||(16934334-16934393)
chr4 (1-60)||(18709354-18709413)
chr4 (1-60)||(18847236-18847295)
chr4 (1-60)||(22046876-22046935)
chr4 (1-60)||(22780564-22780623)
chr4 (1-60)||(22782929-22782988)
chr4 (1-60)||(24348301-24348360)
chr4 (1-60)||(24446775-24446834)
chr4 (1-60)||(36378375-36378434)
chr4 (1-60)||(41997575-41997634)
chr4 (1-60)||(47274810-47274868)
chr4 (1-60)||(51015329-51015388)
chr4 (2-60)||(619639-619697)
chr4 (2-60)||(18409539-18409597)
chr4 (1-60)||(13544042-13544101)
chr4 (1-60)||(36919775-36919835)
chr4 (12-60)||(47210942-47210990)
chr4 (1-60)||(12396036-12396095)
chr4 (1-60)||(12400998-12401057)
chr4 (1-60)||(16931980-16932039)
chr4 (108-155)||(30773924-30773971)
chr4 (1-60)||(38270177-38270236)
chr4 (1-60)||(53405213-53405271)
chr4 (1-58)||(37313257-37313314)
chr4 (4-60)||(6132955-6133011)
chr4 (1-60)||(6764922-6764986)
chr4 (1-60)||(9174337-9174396)
chr4 (1-60)||(9176665-9176724)
chr4 (1-56)||(22132582-22132636)
chr4 (1-60)||(22134807-22134865)
chr4 (1-60)||(36380432-36380491)
chr4 (26-60)||(2891400-2891434)
chr4 (1-60)||(7941404-7941465)
chr4 (1-43)||(17662436-17662478)
chr4 (12-60)||(19322779-19322826)
[»] chr3 (76 HSPs)
chr3 (1-60)||(3314693-3314752)
chr3 (1-60)||(4308470-4308529)
chr3 (1-60)||(18097089-18097148)
chr3 (1-60)||(18099359-18099418)
chr3 (1-60)||(24979716-24979775)
chr3 (1-60)||(30005850-30005909)
chr3 (1-60)||(1313418-1313477)
chr3 (1-60)||(6561819-6561878)
chr3 (1-60)||(10084578-10084637)
chr3 (1-60)||(25533451-25533510)
chr3 (1-60)||(26720557-26720616)
chr3 (1-60)||(27101370-27101429)
chr3 (1-60)||(28100230-28100289)
chr3 (1-60)||(28102191-28102250)
chr3 (1-60)||(41849161-41849220)
chr3 (1-60)||(43423652-43423711)
chr3 (1-60)||(45882948-45883007)
chr3 (1-60)||(51943380-51943439)
chr3 (1-60)||(53917853-53917912)
chr3 (1-54)||(32264228-32264281)
chr3 (1-60)||(12268153-12268213)
chr3 (1-60)||(1626872-1626931)
chr3 (1-60)||(3859537-3859596)
chr3 (1-60)||(5191662-5191721)
chr3 (1-60)||(5926953-5927012)
chr3 (1-60)||(10191498-10191557)
chr3 (1-60)||(10956216-10956275)
chr3 (1-60)||(10958512-10958571)
chr3 (1-60)||(11163159-11163218)
chr3 (1-60)||(11170413-11170472)
chr3 (1-60)||(18162672-18162731)
chr3 (1-60)||(25388915-25388974)
chr3 (1-60)||(28181031-28181090)
chr3 (1-60)||(28413221-28413280)
chr3 (1-60)||(35777430-35777489)
chr3 (1-60)||(36011836-36011895)
chr3 (1-60)||(38210379-38210438)
chr3 (1-60)||(39715478-39715537)
chr3 (1-60)||(42990313-42990372)
chr3 (1-60)||(42992295-42992354)
chr3 (1-60)||(43228300-43228359)
chr3 (1-60)||(48361860-48361919)
chr3 (1-60)||(50494008-50494067)
chr3 (1-60)||(54691763-54691822)
chr3 (1-54)||(15780886-15780939)
chr3 (1-58)||(29956697-29956754)
chr3 (1-58)||(38890051-38890108)
chr3 (1-60)||(880640-880700)
chr3 (1-60)||(455916-455975)
chr3 (1-60)||(458293-458352)
chr3 (1-60)||(746766-746825)
chr3 (1-56)||(1321492-1321547)
chr3 (1-60)||(4104084-4104143)
chr3 (1-60)||(6065985-6066044)
chr3 (1-60)||(10621719-10621778)
chr3 (1-60)||(22114494-22114553)
chr3 (1-60)||(43421604-43421663)
chr3 (1-60)||(51727196-51727254)
chr3 (2-60)||(53915686-53915744)
chr3 (1-54)||(43226100-43226153)
chr3 (1-60)||(6063635-6063694)
chr3 (1-60)||(9604796-9604855)
chr3 (21-60)||(35918158-35918197)
chr3 (1-55)||(53468645-53468699)
chr3 (19-60)||(27635834-27635875)
chr3 (1-60)||(47149083-47149143)
chr3 (1-59)||(889961-890020)
chr3 (21-60)||(47701804-47701843)
chr3 (1-47)||(7606776-7606822)
chr3 (1-47)||(28137495-28137541)
chr3 (1-47)||(32219106-32219152)
chr3 (1-43)||(51674955-51674997)
chr3 (1-43)||(53591210-53591252)
chr3 (1-47)||(54884177-54884223)
chr3 (19-60)||(6231458-6231499)
chr3 (14-60)||(24177288-24177333)
[»] chr2 (33 HSPs)
chr2 (1-60)||(22407600-22407659)
chr2 (1-60)||(40032249-40032308)
chr2 (1-60)||(21520884-21520943)
chr2 (1-60)||(22163138-22163197)
chr2 (1-60)||(23452428-23452487)
chr2 (1-60)||(34979770-34979829)
chr2 (1-57)||(6264340-6264396)
chr2 (1-60)||(6259006-6259065)
chr2 (1-60)||(14837278-14837337)
chr2 (1-60)||(22287527-22287586)
chr2 (1-60)||(24162403-24162462)
chr2 (1-60)||(31732956-31733015)
chr2 (1-60)||(42064520-42064579)
chr2 (1-60)||(42923700-42923759)
chr2 (1-60)||(45280175-45280234)
chr2 (1-55)||(19007650-19007704)
chr2 (1-58)||(11739751-11739808)
chr2 (1-58)||(15539666-15539723)
chr2 (1-60)||(17848448-17848508)
chr2 (1-60)||(3022168-3022227)
chr2 (1-60)||(13910235-13910294)
chr2 (1-60)||(19502202-19502261)
chr2 (1-60)||(35215777-35215836)
chr2 (1-60)||(38020207-38020266)
chr2 (95-155)||(16663420-16663480)
chr2 (1-60)||(17849122-17849181)
chr2 (1-60)||(19504536-19504595)
chr2 (1-60)||(28196642-28196701)
chr2 (1-60)||(35218154-35218213)
chr2 (1-60)||(44289259-44289318)
chr2 (10-60)||(5377629-5377679)
chr2 (1-60)||(27104804-27104862)
chr2 (1-60)||(45239168-45239226)
[»] chr1 (62 HSPs)
chr1 (1-60)||(13215110-13215169)
chr1 (1-60)||(38925671-38925730)
chr1 (2-60)||(4131573-4131631)
chr1 (1-60)||(2510517-2510576)
chr1 (1-60)||(2617545-2617604)
chr1 (1-60)||(6995893-6995952)
chr1 (1-60)||(13761866-13761925)
chr1 (1-60)||(15823575-15823634)
chr1 (1-60)||(18307138-18307197)
chr1 (1-60)||(20291486-20291545)
chr1 (1-60)||(21948380-21948439)
chr1 (1-60)||(24325692-24325751)
chr1 (1-60)||(47451677-47451736)
chr1 (1-60)||(48665206-48665265)
chr1 (2-60)||(39932102-39932160)
chr1 (1-60)||(6756556-6756616)
chr1 (1-60)||(50307739-50307799)
chr1 (1-60)||(3579809-3579868)
chr1 (1-60)||(6823914-6823973)
chr1 (1-60)||(9241279-9241338)
chr1 (1-60)||(10400021-10400080)
chr1 (1-60)||(12302698-12302757)
chr1 (1-60)||(14098163-14098222)
chr1 (1-60)||(15295027-15295086)
chr1 (1-60)||(16226196-16226255)
chr1 (1-60)||(16428682-16428741)
chr1 (1-60)||(17186321-17186380)
chr1 (1-56)||(17324829-17324884)
chr1 (1-60)||(20302488-20302547)
chr1 (1-60)||(27339323-27339382)
chr1 (1-60)||(28840709-28840768)
chr1 (1-60)||(28842524-28842583)
chr1 (1-60)||(31735714-31735773)
chr1 (1-60)||(39462548-39462607)
chr1 (1-60)||(47906299-47906358)
chr1 (1-60)||(50076865-50076924)
chr1 (1-60)||(50079014-50079073)
chr1 (1-60)||(51750068-51750127)
chr1 (1-58)||(46431900-46431957)
chr1 (1-60)||(31425211-31425271)
chr1 (1-49)||(50248765-50248813)
chr1 (1-60)||(18839616-18839675)
chr1 (1-60)||(25127901-25127960)
chr1 (1-58)||(51752396-51752453)
chr1 (1-60)||(31489944-31490001)
chr1 (20-60)||(41646949-41646989)
chr1 (1-60)||(2949424-2949483)
chr1 (1-60)||(6823044-6823102)
chr1 (1-60)||(9459610-9459669)
chr1 (1-60)||(9463437-9463496)
chr1 (1-60)||(25251468-25251527)
chr1 (1-60)||(28207259-28207318)
chr1 (1-60)||(28998446-28998505)
chr1 (1-60)||(29004162-29004221)
chr1 (1-60)||(47177391-47177450)
chr1 (1-60)||(47179742-47179801)
chr1 (1-55)||(40133978-40134032)
chr1 (1-49)||(17324103-17324151)
chr1 (1-60)||(17318922-17318981)
chr1 (1-60)||(27337132-27337190)
chr1 (1-60)||(11457668-11457727)
chr1 (1-60)||(31423066-31423126)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-60)||(14573-14632)
scaffold0131 (1-60)||(15057-15116)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-60)||(41674-41733)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-60)||(79223-79282)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-60)||(35677-35736)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-60)||(183831-183890)
scaffold0005 (1-60)||(52049-52108)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-60)||(11665-11723)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-60)||(6237-6296)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-60)||(79-138)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-60)||(2918-2977)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-60)||(85268-85327)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-60)||(4035-4093)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-60)||(29209-29268)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-60)||(79897-79957)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-60)||(2080-2138)
[»] scaffold0552 (1 HSPs)
scaffold0552 (3-60)||(1019-1081)


Alignment Details
Target: scaffold0025 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 69482 - 69541
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  69482 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 69541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 73214 - 73272
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctag 59  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  73214 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctag 73272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14807895 - 14807836
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14807895 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 14807836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33541579 - 33541638
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33541579 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 33541638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 608878 - 608821
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  608878 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaacccta 608821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37214382 - 37214438
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccct 57  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37214382 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccct 37214438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1225310 - 1225251
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  1225310 gaatcaaccctcaaaccgtagtgtttgttccaaagagacaaactctttacaaaccctagt 1225251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27827130 - 27827071
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27827130 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 27827071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27829441 - 27829382
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27829441 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 27829382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28283410 - 28283469
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28283410 gaatcaaccctcaaaccctagtgtttgttccaaagagtcaaactctatacaaaccctagt 28283469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32339453 - 32339394
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32339453 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 32339394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30480694 - 30480747
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30480694 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaac 30480747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15068125 - 15068069
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccct 57  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15068125 gaattaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccct 15068069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26775345 - 26775285
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagta 61  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  26775345 gaattaaccctcaaaccctagtgtttgttccaaagagacaaactatatacaaaccctagta 26775285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5622929 - 5622988
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  5622929 gaatcaaccctcaaaccctagtgtttgttcccaatagacaaactctatacaaaccctagt 5622988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15072854 - 15072795
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15072854 gaatcaaccctaaaaccctagtgtttgttccaaagagacaaactctatacaaaccatagt 15072795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22684847 - 22684906
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  22684847 gaatcaaccttcaaaccctagtgtttgttccaaaaagacaaactctatacaaaccctagt 22684906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27107088 - 27107147
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  27107088 gaatcaaccctcaaactctagtgtttgttccgaagagacaaactctatacaaaccctagt 27107147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27911158 - 27911099
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  27911158 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 27911099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27957577 - 27957518
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  27957577 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 27957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28251758 - 28251817
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28251758 gaatcaacccacaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 28251817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43079746 - 43079687
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43079746 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 43079687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3874154 - 3874101
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3874154 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaac 3874101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41384888 - 41384831
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  41384888 gaatcaaccttcaaaccctagtgtttgttcccaagagacaaactctatacaaacccta 41384831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13858675 - 13858734
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||    
T  13858675 gaatcaaccctcaaaccctagtgtttgttgtcaagagacaaactctatacaaaccctagt 13858734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14477420 - 14477361
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||||||    
T  14477420 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactttatacaaaccctagt 14477361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15809362 - 15809304
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  15809362 gaatcaacccacaaaccctagtgtttgttccaaa-agacaaactctatacaaaccctagt 15809304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18810852 - 18810793
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  18810852 gaatcaacccacaaaccctagtgtttgtttcgaagagacaaactctatacaaaccctagt 18810793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24873372 - 24873431
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  24873372 gaatcaacccacaaaccctagtgtttgctcccaagagacaaactctatacaaaccctagt 24873431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35872574 - 35872633
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||    
T  35872574 gaatcaaccctcaaaccctagtgttcgtttccaagagacaaactctatacaaaccctagt 35872633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36865682 - 36865623
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||    
T  36865682 gaatcaaccctcaaaccctaatgtttgttgccaagagacaaactctatacaaaccctagt 36865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43082117 - 43082058
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  43082117 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccttagt 43082058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 41382813 - 41382760
Alignment:
Q  5 caaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  41382813 caaccctcaaaccctagtgtttgttcccaagagacaaattctatacaaacccta 41382760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4424162 - 4424103
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  4424162 gaatcaacccacaaaccctagtgtttgtttcgaagcgacaaactctatacaaaccctagt 4424103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14419382 - 14419441
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||  | |||||| ||| ||||||||||||||||||||||||||||    
T  14419382 gaatcaaccctcaaaccccaatgtttgctcccaagagacaaactctatacaaaccctagt 14419441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5372369 - 5372426
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||||||| ||||||||    
T  5372369 gaattaaccctcaaaccctagtgtttgtttccaagagacaaactctatataaacccta 5372426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44720987 - 44720935
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaa 53  Q
    |||||||||| |||||| ||||||||||||| |||||||| ||||||||||||    
T  44720987 gaatcaacccacaaaccctagtgtttgttccgaagagacagactctatacaaa 44720935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15185901 - 15185960
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||| |||| ||||| ||||    
T  15185901 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactttatataaaccatagt 15185960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25952664 - 25952613
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaa 52  Q
    ||||||||||||||||| ||||||||||| | |||||||||||| |||||||    
T  25952664 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactatatacaa 25952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18813026 - 18812980
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||    
T  18813026 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactcta 18812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43530259 - 43530213
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||||    
T  43530259 gaatcaaccttcaaaacctagtgtttgttccaaagagacaaactcta 43530213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24748692 - 24748633
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24748692 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 24748633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44724677 - 44724618
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44724677 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 44724618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 443693 - 443634
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  443693 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 443634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13099667 - 13099726
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  13099667 gaatcaaccctcaaactctagtgtttgttccaaagagacaaactctatacaaaccctagt 13099726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18567711 - 18567652
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  18567711 gaatcaaccctcaaaccctagcgtttgttccaaagagacaaactctatacaaaccctagt 18567652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31435238 - 31435297
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  31435238 gaatcaaccctcaaaccctagcgtttgttccaaagagacaaactctatacaaaccctagt 31435297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38394084 - 38394025
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38394084 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 38394025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43253708 - 43253766
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43253708 gaatcaaccctcaaacct-agtgtttgttccaaagagacaaactctatacaaaccctagt 43253766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48457751 - 48457692
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48457751 gaatgaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 48457692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21592334 - 21592391
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21592334 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaatccta 21592391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21990248 - 21990196
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaa 53  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21990248 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaa 21990196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42223256 - 42223196
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  42223256 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 42223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35727 - 35668
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  35727 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctacacaaaccctagt 35668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44662 - 44603
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  44662 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctacacaaaccctagt 44603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1047115 - 1047174
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1047115 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 1047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1850079 - 1850020
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1850079 gaatcaacccacaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 1850020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7470213 - 7470272
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  7470213 gaatcaacccacaaaccctagtgtttgttccaaagagacaatctctatacaaaccctagt 7470272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7472171 - 7472230
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  7472171 gaatcaacccacaaaccctagtgtttgttccaaagagacaatctctatacaaaccctagt 7472230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20297460 - 20297401
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  20297460 gaatcaaccctcaaaccctactgtttgttcccaagagacaaactctatacaaaccctagt 20297401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20626136 - 20626077
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  20626136 gaatcaaccctcaaaacctagtgtttgttccaaacagacaaactctatacaaaccctagt 20626077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20630027 - 20629968
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  20630027 gaatcaaccctcaaaacctagtgtttgttccaaacagacaaactctatacaaaccctagt 20629968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20642446 - 20642387
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  20642446 gaatcaaccctcaaaacctagtgtttgttccaaacagacaaactctatacaaaccctagt 20642387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21678164 - 21678105
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  21678164 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 21678105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21680125 - 21680066
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  21680125 gaatcaaccctcaaaccctagtgtttgttaccaagagacaaactctatacaaaccctagt 21680066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25276239 - 25276180
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  25276239 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 25276180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28485664 - 28485605
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28485664 gaatcaacccgcaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 28485605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40836933 - 40836992
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  40836933 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 40836992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42331190 - 42331249
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  42331190 gaatcaaccctcaaaccctagtgtttgttcctaagagacaaactctatacaaaccttagt 42331249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24258561 - 24258504
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  24258561 gaatcaaccctcaaaccatagtgtttgttgccaagagacaaactctatacaaacccta 24258504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4296125 - 4296185
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4296125 gaatcaaccatcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 4296185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9680918 - 9680858
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  9680918 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccatagt 9680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11757328 - 11757268
Alignment:
Q  1 gaatcaaccctcaaa-ccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  11757328 gaatcaaccctcaaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 11757268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20299558 - 20299498
Alignment:
Q  1 gaatcaaccctcaaa-ccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  20299558 gaatcaaccctcaaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 20299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26804670 - 26804608
Alignment:
Q  1 gaatcaaccctcaaacctta---gtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  26804670 gaatcaaccctcaaaccctactagtgtttgttccaaagagacaaactctatacaaaccctagt 26804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37412318 - 37412378
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttcc-aaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  37412318 gaatcaaccctcaaaccctagtgtttgttgctaaagagacaaactctatacaaaccctagt 37412378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1049486 - 1049545
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  1049486 gaatcaacccacaaaccctagtgtttattccgaagagacaaactctatacaaaccctagt 1049545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3035819 - 3035760
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  3035819 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctataaaaaccctagt 3035760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3878675 - 3878616
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  3878675 gaatcaacccacaagccctagcgtttgttccaaagagacaaactctatacaaaccctagt 3878616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7349464 - 7349523
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  7349464 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 7349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11355356 - 11355297
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| || | ||||||||||||||||||||||||||||    
T  11355356 gaatcaaccctcaaaccctagtgtttattgccaagagacaaactctatacaaaccctagt 11355297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18345639 - 18345580
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||||    
T  18345639 gaatcaaccctcaaaacctagtatttgttgcaaagagacaaactctatacaaaccctagt 18345580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20137300 - 20137359
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  20137300 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaactctagt 20137359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22251733 - 22251792
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  22251733 gaatcaacccttaaaccctagtgtttgttccaaatagacaaactctatacaaactctagt 22251792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25542628 - 25542569
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  25542628 gaatcaacccacaaaccctagtgttttttccgaagagacaaactctatacaaaccctagt 25542569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27306421 - 27306479
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  27306421 gaatcaaccctcaaaccctagtttttgttccaaagagacaaactctata-aaaccctagt 27306479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39146178 - 39146237
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  39146178 gaatcaaccttcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 39146237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 40946425 - 40946367
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  40946425 aatcaacccacaaaccctagtgtttgtttctaagagacaaactctatacaaaccctagt 40946367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9679157 - 9679098
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  9679157 gaatcaatcctcaaacct-agtgtttgttgccaaagagacaaactctatacaaaccctagt 9679098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7351843 - 7351902
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||| ||||||    
T  7351843 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaagcctagt 7351902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27832824 - 27832883
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||||||||||| ||||    
T  27832824 gaatcaaccctcaaaccctagtgtatgttgccaagagacaaactctatacaaaccttagt 27832883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31156102 - 31156161
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||| | ||||||||| ||| ||||||||||||||||||||||||||||    
T  31156102 gaatcaacccacaaatcctagtgtttgctcctaagagacaaactctatacaaaccctagt 31156161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28487651 - 28487592
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| | |||| ||||||| ||| | |||||||||||||||||||||| |||||    
T  28487651 gaatcaacccacgaaccctagtgttagtttcgaagagacaaactctatacaaactctagt 28487592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 24817555 - 24817600
Alignment:
Q  14 aaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  24817555 aaccctagtgtttgttgcaaagag-caaactctatacaaaccctagt 24817600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1230440 - 1230499
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1230440 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 1230499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3390502 - 3390443
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  3390502 gaatcaaccctcaaaccctagtgtttgttccaaagagaaaaactctatacaaaccctagt 3390443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11983220 - 11983279
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  11983220 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 11983279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13057317 - 13057258
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13057317 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 13057258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15530313 - 15530372
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  15530313 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 15530372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15541331 - 15541390
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  15541331 gaatcaaccctcaaaccctagtgtttattccaaagagacaaactctatacaaaccctagt 15541390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28241512 - 28241571
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28241512 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 28241571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3630055 - 3630114
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  3630055 gaatcaaccctcaaaccctagtgtttgttgctaagagacaaactctatacaaaccctagt 3630114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4816422 - 4816481
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4816422 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 4816481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9020049 - 9019990
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  9020049 gaatcaaccctcaaaacctagtgattgttccaaagagacaaactctatacaaaccctagt 9019990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13039877 - 13039822
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccc 56  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13039877 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccc 13039822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14458956 - 14459015
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  14458956 gaatcagccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 14459015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14507366 - 14507425
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  14507366 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 14507425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25477397 - 25477338
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  25477397 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatataaaccctagt 25477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30729019 - 30729074
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccc 56  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  30729019 gaatcaaccctcaaatcctagtgtttgttccaaagagacaaactctatacaaaccc 30729074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30967324 - 30967265
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  30967324 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccatagt 30967265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1072068 - 1072127
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||| | |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  1072068 gaatcaactcacaaaccctagtgtttgttccaaagagacaaactctatacaaacactagt 1072127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2629076 - 2629135
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  2629076 gaatcaacccttaaaacctagtgtttgttcctaagagacaaactctatacaaaccctagt 2629135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3632129 - 3632188
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  3632129 gaatcaacccttaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 3632188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12195706 - 12195765
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  12195706 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 12195765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15532872 - 15532931
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||    
T  15532872 gaatcaaccctcaaaccctattgtttgttccaaagaaacaaactttatacaaaccctagt 15532931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19227599 - 19227658
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  19227599 gaatcaacccacaaaccctagtgtttgatccaaaaagacaaactctatacaaaccctagt 19227658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20915547 - 20915606
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  20915547 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaatcctagt 20915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32280119 - 32280061
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctag 59  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||    
T  32280119 gaatcaaccctcaaacccaagtgtttgttgccaagagacaaactctatacaaaccctag 32280061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30034794 - 30034847
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  30034794 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaac 30034847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3233921 - 3233981
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||    
T  3233921 gaatcaaccctcaaaccctagtgtttgttaccaaagagacaaactatatacaaaccttagt 3233981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 12161752 - 12161805
Alignment:
Q  5 caaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  12161752 caaccctcaaaccctagtgtttgttcca--gagacaaactctatacaaaccctagt 12161805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32447506 - 32447566
Alignment:
Q  1 gaatcaaccctcaaacct-tagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| || ||||||||||| | ||||||||||||||||||||||||||||    
T  32447506 gaatcaaccctcaaaactctagtgtttgttgccaagagacaaactctatacaaaccctagt 32447566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19704760 - 19704819
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||  ||||||||| ||| ||||||||||||||||||||||||||||    
T  19704760 gaatcaacccacaaactctagtgtttgctcctaagagacaaactctatacaaaccctagt 19704819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 22490755 - 22490704
Alignment:
Q  9 cctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  22490755 cctcaaaccctagtgtttgttccaaagaggcaaactatatacaaaccctagt 22490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26932753 - 26932812
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| | | ||||||||||||||||||||||||||||    
T  26932753 gaatcaacccacaaaccctagtgtttgcttctaagagacaaactctatacaaaccctagt 26932812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26065106 - 26065050
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||    
T  26065106 gaatcaaccctcaaaccctagtgttt---ccaaagagacaaactctatacaaactctagt 26065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26085075 - 26085019
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||    
T  26085075 gaatcaaccctcaaaccctagtgttt---ccaaagagacaaactctatacaaactctagt 26085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 8995578 - 8995543
Alignment:
Q  25 ttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||||||||||    
T  8995578 ttgttccaaagagacaaactctatacaaaccctagt 8995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13870613 - 13870672
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||  |||||||||| | |||||||||||| |||| ||||||||||    
T  13870613 gaatcaaccctcaaacccaagtgtttgttgccaagagacaaactttatataaaccctagt 13870672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 17852647 - 17852606
Alignment:
Q  19 tagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  17852647 tagtgtttgttcgaaagagacaaactctatacaaactctagt 17852606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17072971 - 17072912
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17072971 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 17072912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21948114 - 21948055
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21948114 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 21948055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31472804 - 31472863
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31472804 gaatcaaccctcaaaccttagtgtttgttcccaagagacaaactctatacaaaccctagt 31472863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36402519 - 36402578
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36402519 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 36402578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 658544 - 658603
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  658544 gaatcaaccctcaaaccctagtgtttgttccaaatagacaaactctatacaaaccctagt 658603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1189800 - 1189859
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  1189800 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccgtagt 1189859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4236717 - 4236658
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4236717 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 4236658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6756582 - 6756523
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6756582 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccttagt 6756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12556114 - 12556173
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12556114 gaatcaaccctcaaaccttagtgtttgttcccaagagacaaactctatacaaactctagt 12556173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18469099 - 18469040
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  18469099 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 18469040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18509509 - 18509568
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18509509 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 18509568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18511403 - 18511462
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18511403 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 18511462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18596733 - 18596674
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  18596733 gaatcaaccctcaaaccatattgtttgttccaaagagacaaactctatacaaaccctagt 18596674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25804113 - 25804054
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25804113 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 25804054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25904191 - 25904132
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  25904191 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaatccctagt 25904132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25921664 - 25921723
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25921664 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 25921723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26098442 - 26098501
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26098442 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 26098501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27910538 - 27910479
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  27910538 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 27910479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39854571 - 39854512
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  39854571 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 39854512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40221610 - 40221551
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  40221610 gaatcaaccctcaaatcctagtgtttgttccaaagagacaaactctatacaaaccctagt 40221551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 10474516 - 10474572
Alignment:
Q  3 atcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctag 59  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10474516 atcaaccctcaaaccccagtgtttgttccaaagagacaaactctatacaaaccctag 10474572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2175007 - 2174948
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2175007 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 2174948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6745156 - 6745098
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  6745156 gaatcaaccctcaaacct-agtgtttgttccaaagagacaaactttatacaaaccctagt 6745098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10529290 - 10529349
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  10529290 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctataaaaatcctagt 10529349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16776246 - 16776187
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16776246 gaatcaacccacaaaccctagtgtttattccaaagagacaaactctatacaaaccctagt 16776187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20043138 - 20043079
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  20043138 gaatcaaccctcaaaccctagtgtttgtttccaagagacaaactctatacaaaccctagt 20043079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20045098 - 20045039
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  20045098 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 20045039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26097821 - 26097762
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  26097821 gaatcaaccctctaaccctagtgtttgttccaaagagacaaactctatccaaaccctagt 26097762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31542823 - 31542764
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  31542823 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 31542764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31545168 - 31545109
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  31545168 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 31545109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34477245 - 34477304
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34477245 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 34477304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34479610 - 34479669
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34479610 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 34479669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 2818532 - 2818586
Alignment:
Q  6 aaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2818532 aaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccatagt 2818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16092391 - 16092448
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  16092391 gaatcaaccctcaaaccctagtgtttgttgcaaagagacagactctatacaaacccta 16092448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39398184 - 39398243
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  39398184 gaatcaaccctcaaacct-agtgtttgttgccaaagagacaaactctatacaaaccctagt 39398243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18466772 - 18466713
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||||    
T  18466772 gaatcaaccctcaaaacctagtgtttgtttcaaagagacaaactctatccaaaccctagt 18466713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21684642 - 21684701
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  21684642 gaatcaacccataaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 21684701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27912624 - 27912565
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||    
T  27912624 gaatcaaccctcaaaacctattatttgttccaaagagacaaactctatacaaaccctagt 27912565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31179562 - 31179621
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  31179562 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 31179621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31466169 - 31466228
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  31466169 gaatcaaccgtcaaaccctggtgtttgttcccaagagacaaactctatacaaaccctagt 31466228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34530857 - 34530916
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  34530857 gaatcaaccttcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 34530916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38882194 - 38882135
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  38882194 gaatcaacccacaaaccctagtgtttgtttcgaagagacaaactctatacaaaccctagt 38882135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 17818682 - 17818740
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  17818682 aatcaaccatcaaaccctagtgtttgttccaaagagacgaactctatacaaactctagt 17818740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37705971 - 37706029
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctag 59  Q
    ||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||    
T  37705971 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaagtctatacaaaccctag 37706029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 21288839 - 21288795
Alignment:
Q  14 aaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  21288839 aaccctagtgtttgttccaaagagacaaactctatacaaacccta 21288795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15552333 - 15552274
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| |||||| |||||||||||||||||||||    
T  15552333 gaatcaacccacaaaccctagtgtttgctcctaagagataaactctatacaaaccctagt 15552274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2954505 - 2954445
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| | || ||||||||||||    
T  2954505 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaattatacacaaaccctagt 2954445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 20507659 - 20507707
Alignment:
Q  7 accctcaaaccttagtgtttgttccaaagagacaaactctatacaaacc 55  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  20507659 acccttaaacccttgtgtttgttccaaagagacaaactctatacaaacc 20507707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6747393 - 6747335
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||| |||||||||| |||||||||||| | ||||||||| |||||    
T  6747393 gaatcaaccctcaaacct-agtgtttgtttcaaagagacaaattttatacaaactctagt 6747335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 695966 - 695924
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaac 43  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  695966 gaatcaaccctcaaaccctagtgtttgttccaaagatacaaac 695924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 24126943 - 24126885
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||| | ||||||| |||| ||||||   ||||||||||||||||||||||||||||    
T  24126943 aatcaatcttcaaaccctagtatttgttgacaagagacaaactctatacaaaccctagt 24126885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26086167 - 26086226
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26086167 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 26086226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40637216 - 40637157
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40637216 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 40637157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3824761 - 3824820
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  3824761 gaatcaaccctcaaaccctagtgttagttccaaagagacaaactctatacaaaccctagt 3824820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5637656 - 5637715
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  5637656 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 5637715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9148395 - 9148336
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  9148395 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaatcctagt 9148336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14633461 - 14633402
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14633461 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaactctagt 14633402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22801053 - 22801112
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22801053 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaactctagt 22801112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22802925 - 22802984
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  22802925 gaatcaaccctcaaaccctaatgtttgttccaaagagacaaactctatacaaaccctagt 22802984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24879131 - 24879072
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  24879131 gaatcaaccctcaaaccctggtgtttgttccaaagagacaaactctatacaaaccctagt 24879072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 24880589 - 24880534
Alignment:
Q  5 caaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24880589 caaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 24880534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33415679 - 33415737
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33415679 gaatcaaccctcaaaccttagtgtttgttcc-aagagacaaactctatacaaaccctagt 33415737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37089562 - 37089621
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37089562 gaatcaaccctcaaaccctagtgtttgttctaaagagacaaactctatacaaaccctagt 37089621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48486461 - 48486402
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  48486461 gaatcaaccctcaaaccctagtgtttgttccaaagagataaactctatacaaaccctagt 48486402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38928368 - 38928428
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  38928368 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 38928428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5198562 - 5198503
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  5198562 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaatcctagt 5198503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8631610 - 8631669
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8631610 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 8631669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11006428 - 11006487
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  11006428 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 11006487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11008757 - 11008816
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  11008757 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 11008816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11435097 - 11435038
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  11435097 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 11435038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14787622 - 14787681
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14787622 gaatcaatcctcaaaccctagtgtttgttccaaaaagacaaactctatacaaaccctagt 14787681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22044581 - 22044640
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22044581 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 22044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24888938 - 24888879
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||    
T  24888938 gaatcaaccctcaaagcctagtgtttgttccaaagagacaaactctatacaatccctagt 24888879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27499187 - 27499128
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  27499187 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 27499128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38409347 - 38409288
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  38409347 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 38409288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40091606 - 40091665
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  40091606 gaatcaaccctcaaaccatagtgtttgttccaaagagacaaactctaaacaatccctagt 40091665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44600029 - 44600088
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  44600029 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 44600088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47868543 - 47868484
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  47868543 gaatcaaccctcaaaacctagtgtttgttccaaggagacaaactctatacaaaccctagt 47868484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52942637 - 52942696
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  52942637 gaatcaatcctcaaaccctagtgtttgtttcaaagagacaaactctatacaaaccctagt 52942696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 56030586 - 56030527
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  56030586 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaactctagt 56030527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19096025 - 19095967
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  19096025 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaacccta 19095967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 5101133 - 5101080
Alignment:
Q  7 accctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  5101133 accctcaaaccctagtgtttgttccaaagtgacaaactctatacaaaccctagt 5101080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31849789 - 31849849
Alignment:
Q  1 gaatcaaccctcaaa-ccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  31849789 gaatcaacccacaaaaccttagtgtttgttccgaagagacaaactctatacaaaccctagt 31849849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36921684 - 36921744
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  36921684 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactatatacaaaccctagt 36921744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2485063 - 2485122
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2485063 gaatcaacccagaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 2485122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3937400 - 3937459
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||    
T  3937400 gaatcaaccctcaaaccctagtgtttgttcccaagaaacaaactctatacaaactctagt 3937459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16453451 - 16453392
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||    
T  16453451 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactttgtacaaactctagt 16453392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16934334 - 16934393
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  16934334 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 16934393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18709354 - 18709413
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18709354 gaatcaactcacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 18709413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18847295 - 18847236
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  18847295 gaatcaacccacaaactctagtgtttgttccgaagagacaaactctatacaaaccctagt 18847236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22046876 - 22046935
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||    
T  22046876 gaatcaacccacaaaccctagtgtttgttccgaaaagacaaactctatacaaaccctagt 22046935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22780564 - 22780623
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  22780564 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 22780623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22782929 - 22782988
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  22782929 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 22782988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24348360 - 24348301
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  24348360 gaatcaacccacaaaccctagtgtttgtttcaaagagacaaactctatacaaaccttagt 24348301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24446775 - 24446834
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||    
T  24446775 gaatcaaccctcaaaccctagtgttcgtttccaagagacaaactctatacaaaccctagt 24446834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36378434 - 36378375
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  36378434 gaatcaaccttcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 36378375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41997634 - 41997575
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  41997634 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaactctagt 41997575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47274868 - 47274810
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  47274868 gaatcaaccctcaaaccctagtgttagttccaaagagacaaact-tatacaaaccctagt 47274810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51015388 - 51015329
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  51015388 gaatcaacccacaaaccctagtgtttgttccgaagagacaaacactatacaaaccctagt 51015329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 619639 - 619697
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||    
T  619639 aatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatgcaaaccctagt 619697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 18409539 - 18409597
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  18409539 aatcaaccctcaaaccctagtgtttgttgccaagtgacaaactctatacaaaccctagt 18409597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13544101 - 13544042
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  13544101 gaatcaatcctcaaacct-agtgtttgttgccaaagagacaaactctatacaaaccctagt 13544042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36919775 - 36919835
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||||    
T  36919775 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactttatccaaaccctagt 36919835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 47210942 - 47210990
Alignment:
Q  12 caaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  47210942 caaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 47210990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12396036 - 12396095
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||    
T  12396036 gaatcaaccctcaaaccctagtgtttgttggctagagacaaactctatacaaaccctagt 12396095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12400998 - 12401057
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||    |||||||||||||||||||||||||||    
T  12400998 gaatcaaccctcaaaccctagtgtttgttggccagagacaaactctatacaaaccctagt 12401057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16931980 - 16932039
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| |||||||| |||||||||||||||||||    
T  16931980 gaatcaacccacaaaccctagtgtttgctcctaagagacagactctatacaaaccctagt 16932039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 30773924 - 30773971
Alignment:
Q  108 ctaatcaaagaaacttgtaaaccaatcaaataaaatctaaattaactg 155  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  30773924 ctaatcaaagaaacttgtataccaatcaaataaaatcaaaattaactg 30773971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38270177 - 38270236
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | || |||||||||||| ||||||||||||    
T  38270177 gaatcaaccctcaaaccctagtgtttgttgccaaaagacaaactctacacaaaccctagt 38270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53405271 - 53405213
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||    
T  53405271 gaatcaaccctcaaaacctagt-tttgttctaaagagacaaactctatacaaaccctagt 53405213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37313257 - 37313314
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    |||||||| |||||||| ||||||||||| | |||||||||||||||| |||||||||    
T  37313257 gaatcaactctcaaaccctagtgtttgttgccaagagacaaactctatgcaaacccta 37313314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 6133011 - 6132955
Alignment:
Q  4 tcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||| ||||||||||| | || ||||||||||||||||| |||||||    
T  6133011 tcaaccctcaaaccctagtgtttgttgccaatagacaaactctatacaagccctagt 6132955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6764986 - 6764922
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaa-----gagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||     ||||||||||||||||||||||||||    
T  6764986 gaatcaaccctcaaaacctagtgtttgttccaaactaaagagacaaactctatacaaaccctagt 6764922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9174337 - 9174396
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||| | | |||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  9174337 gaatcaactcacgaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 9174396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9176665 - 9176724
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||| ||| ||| |||||||||||| |||||||||||||||    
T  9176665 gaatcaacccacaaaccctagtgcttgctcctaagagacaaactttatacaaaccctagt 9176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22132582 - 22132636
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccc 56  Q
    |||||||||| |||||| |||||||||||| || ||||||||||||||||||||||    
T  22132582 gaatcaacccacaaaccctagtgtttgttcgaa-gagacaaactctatacaaaccc 22132636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22134807 - 22134865
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||||||  || ||||||||||||||||||||||||||    
T  22134807 gaatcaacccacaaaccctagtgtttgtttgaa-gagacaaactctatacaaaccctagt 22134865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36380491 - 36380432
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || || || || | ||||||||||||||||||||||||||||    
T  36380491 gaatcaaccctcaaaccctaatggtttttgccaagagacaaactctatacaaaccctagt 36380432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 2891434 - 2891400
Alignment:
Q  26 tgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||||||||||||||||||||    
T  2891434 tgttccaaagagacaaactctatacaaaccctagt 2891400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7941465 - 7941404
Alignment:
Q  1 gaatcaaccctcaaaccttagtg--tttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||  |||| ||  ||||||||||||||||||||||||||||    
T  7941465 gaatcaacccacaaaccctagtgcatttgctcgtaagagacaaactctatacaaaccctagt 7941404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17662436 - 17662478
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaac 43  Q
    ||||||||||||||| | ||||||||||| |||||||||||||    
T  17662436 gaatcaaccctcaaaacctagtgtttgtttcaaagagacaaac 17662478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 19322826 - 19322779
Alignment:
Q  12 caaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||    
T  19322826 caaaccctagtgtttgttgccaagag-caaactctatacaaaccctagt 19322779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3314752 - 3314693
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3314752 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 3314693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4308470 - 4308529
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4308470 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 4308529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18097089 - 18097148
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18097089 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 18097148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18099359 - 18099418
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18099359 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 18099418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24979775 - 24979716
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24979775 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 24979716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30005909 - 30005850
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30005909 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 30005850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1313477 - 1313418
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1313477 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 1313418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6561878 - 6561819
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  6561878 gaatcaaccctcaaaccccagtgtttgttccaaagagacaaactctatacaaaccctagt 6561819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10084578 - 10084637
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10084578 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 10084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25533510 - 25533451
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  25533510 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 25533451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26720616 - 26720557
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  26720616 gaatcaaccctcaaaccctagtgtttgttccaaatagacaaactctatacaaaccctagt 26720557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27101370 - 27101429
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  27101370 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 27101429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28100230 - 28100289
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28100230 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 28100289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28102191 - 28102250
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28102191 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 28102250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41849220 - 41849161
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  41849220 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 41849161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43423652 - 43423711
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43423652 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 43423711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45883007 - 45882948
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  45883007 gaatcaaccctcaaaccttattgtttgttccaaagagacaaaatctatacaaaccctagt 45882948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51943439 - 51943380
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  51943439 gaatcaaccctcaaaccctagtgtttgttctaaagagacaaactctatacaaaccctagt 51943380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53917853 - 53917912
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  53917853 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 53917912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32264228 - 32264281
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32264228 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaac 32264281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12268153 - 12268213
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  12268153 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 12268213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1626872 - 1626931
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1626872 gaatcaaccttcaaaccctagtgtttgttccaaagagataaactctatacaaaccctagt 1626931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3859596 - 3859537
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  3859596 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 3859537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5191721 - 5191662
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  5191721 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 5191662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5926953 - 5927012
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  5926953 gaatcaaccctcaaaccctagtgtttgttccaaatagacaaactctatacaaactctagt 5927012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10191498 - 10191557
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  10191498 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctataaaaaccctagt 10191557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10956216 - 10956275
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  10956216 gaatcaaccttcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 10956275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10958512 - 10958571
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  10958512 gaatcaaccttcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 10958571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11163218 - 11163159
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11163218 gaatcaatccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 11163159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11170472 - 11170413
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11170472 gaatcaatccgcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 11170413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18162731 - 18162672
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  18162731 gaatcaatcctcaaaccctagtgtttgttcaaaagagacaaactctatacaaaccctagt 18162672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25388974 - 25388915
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25388974 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 25388915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28181090 - 28181031
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  28181090 gaatcaaccctcaaatcccagtgtttgttccaaagagacaaactctatacaaaccctagt 28181031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28413221 - 28413280
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28413221 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 28413280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35777489 - 35777430
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35777489 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 35777430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36011895 - 36011836
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  36011895 gaatcaaccctcaaaccatagtgtttgttctaaagagacaaactctatacaaaccttagt 36011836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38210438 - 38210379
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  38210438 gaatcaacccacaaaccctagtgtttgttccaaagagataaactctatacaaaccctagt 38210379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39715537 - 39715478
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  39715537 gaatcaaccctcaaaccctagtgtttgtttcaaatagacaaactctatacaaaccctagt 39715478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42990372 - 42990313
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  42990372 gaatcaaccctcaaaacctaatgtttgttccaaagagacaaactctatacaaaccctagt 42990313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42992354 - 42992295
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  42992354 gaatcaaccctcaaaacctagtgtttgtttcaaagagacaaactctatacaaaccctagt 42992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43228359 - 43228300
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  43228359 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaacgctagt 43228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48361860 - 48361919
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  48361860 gaatcaaccctcaaaccctagtttttgttcccaagagacaaactctatacaaaccctagt 48361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 50494067 - 50494008
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50494067 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 50494008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 54691763 - 54691822
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  54691763 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 54691822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15780939 - 15780886
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15780939 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactttatacaaac 15780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29956754 - 29956697
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  29956754 gaatcaaccctcaaaacctaatgtttgttccaaagagacaaactctatacaaacccta 29956697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38890108 - 38890051
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38890108 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaacccta 38890051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 880640 - 880700
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  880640 gaatcaaccctcaaaccctagtgtttgttgccaaagagacgaactctatacaaaccctagt 880700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 455975 - 455916
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  455975 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 455916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 458352 - 458293
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  458352 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 458293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 746825 - 746766
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  746825 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 746766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1321547 - 1321492
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccc 56  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  1321547 gaatcaacccacaaaccctagtgtttgttcccaagagacaaactctatacaaaccc 1321492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4104084 - 4104143
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  4104084 gaatcaacccacaaaccctagtgtttgttccgaagagacaagctctatacaaaccctagt 4104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6065985 - 6066044
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  6065985 gaatcaacccacaaaccctagtgtttgttccgaagagacaaaatctatacaaaccctagt 6066044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10621719 - 10621778
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  10621719 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 10621778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22114494 - 22114553
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  22114494 gaatcaacccacaaaacctagtgtttgttccgaagagacaaactctatacaaaccctagt 22114553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43421604 - 43421663
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  43421604 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaacactatacaaaccctagt 43421663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51727196 - 51727254
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  51727196 gaatcaaccctcaaaccc-agtgtttgttccaaagagacaaactctatacataccctagt 51727254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 53915686 - 53915744
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  53915686 aatcaaccatcaaaccctagtgtttgttcccaagagacaaaatctatacaaaccctagt 53915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43226153 - 43226100
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaac 54  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  43226153 gaatcaacccacaaaccctagtgtttgttccaacgagacaaactctatacaaac 43226100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6063635 - 6063694
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| || |||||||||||||||||||||||||    
T  6063635 gaatcaacccacaaaccctagtgtttgctcctaaaagacaaactctatacaaaccctagt 6063694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9604796 - 9604855
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | |||||||| || ||||||||||||||||||||||| ||||||    
T  9604796 gaatcaaccctcaaaacctagtgtttctttcaaagagacaaactctatacaaatcctagt 9604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 35918158 - 35918197
Alignment:
Q  21 gtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35918158 gtgtttgttccaaagagacaaactctatacaaaccctagt 35918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53468645 - 53468699
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacc 55  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||    
T  53468645 gaatcaatgctcaaaccctagtgtttcttccaaagagacaaactctatacaaacc 53468699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 27635834 - 27635875
Alignment:
Q  19 tagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  27635834 tagtgtttgttcccaagagacaaactctatacaaaccctagt 27635875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47149083 - 47149143
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||| |  |||||||||| |||||||||||||||||||||||||||||||    
T  47149083 gaatcaaccatcaaatcccagtgtttgtttccaaagagacaaactctatacaaaccctagt 47149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 889961 - 890020
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctag 59  Q
    ||||||||| |||||||  |||||||||| ||||| ||||||||||||||||||||||||    
T  889961 gaatcaaccatcaaaccccagtgtttgttgccaaatagacaaactctatacaaaccctag 890020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 47701804 - 47701843
Alignment:
Q  21 gtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  47701804 gtgtttgttccaaatagacaaactctatacaaaccctagt 47701843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7606776 - 7606822
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  7606776 gaatcaaccctcaaaacctagtgtttgttccgaagagacaaactcta 7606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28137495 - 28137541
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  28137495 gaatcaatcctcaaaccctagtgtttgttcccaagagacaaactcta 28137541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32219152 - 32219106
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  32219152 gaatcaaccttcaaaccctagtgtttgttacaaagagacaaactcta 32219106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51674955 - 51674997
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaac 43  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  51674955 gaatcaaccctcaaaccctagtgtttgttccaaagggacaaac 51674997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53591252 - 53591210
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaac 43  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  53591252 gaatcaaccctcaaaccctagtgtttgttctaaagagacaaac 53591210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54884223 - 54884177
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactcta 47  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  54884223 gaatcaaccatcaaaccctagtgtttgttccaaagaaacaaactcta 54884177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 6231499 - 6231458
Alignment:
Q  19 tagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  6231499 tagtgtttgttgccaagagacaaactctatacaaaccctagt 6231458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 24177333 - 24177288
Alignment:
Q  14 aaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  24177333 aaccttagtgtttgttgccaagag-caaactctatacaaaccctagt 24177288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22407600 - 22407659
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22407600 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 22407659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40032249 - 40032308
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40032249 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 40032308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21520884 - 21520943
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  21520884 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaagccctagt 21520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22163138 - 22163197
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22163138 gaatcaaccctcaaaccctagtgtttgttctaaagagacaaactctatacaaaccctagt 22163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23452428 - 23452487
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23452428 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 23452487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34979770 - 34979829
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34979770 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactttatacaaaccctagt 34979829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6264340 - 6264396
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccct 57  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  6264340 gaatcaaccctcaaaccctagtgtttgtaccaaagagacaaactctatacaaaccct 6264396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6259006 - 6259065
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  6259006 gaatcaaccctcaaaccctagtgtttattccaaatagacaaactctatacaaaccctagt 6259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14837337 - 14837278
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  14837337 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactatgtacaaaccctagt 14837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22287527 - 22287586
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  22287527 gaatcaaccctcaaaccctaatgtttgttccaaagagacagactctatacaaaccctagt 22287586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24162403 - 24162462
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24162403 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 24162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31732956 - 31733015
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  31732956 gaatcaaccctcaaaccttagtgtttgttgccaagagacaaactctatacaaactctagt 31733015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42064579 - 42064520
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  42064579 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 42064520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42923700 - 42923759
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  42923700 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaatcctagt 42923759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45280175 - 45280234
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  45280175 gaatcaaccctctaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 45280234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19007704 - 19007650
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacc 55  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  19007704 gaatcaacccttaaaccctagtgtttgttccaaagagacaaactctatacaaacc 19007650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11739751 - 11739808
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  11739751 gaatcaaccctcaaaccctagcgtttgttccaaagagacaaactccatacaaacccta 11739808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15539666 - 15539723
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  15539666 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaacccta 15539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17848508 - 17848448
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  17848508 gaatcaaccctcaaacccaagtgtttgttgccaaagagacaaactctatacaaaccctagt 17848448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3022227 - 3022168
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  3022227 gaatcaaccctcaaaccgtagtgtttgttgccaagagacaaactctatacaaactctagt 3022168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13910235 - 13910294
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13910235 gaatcaacccataaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 13910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19502202 - 19502261
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  19502202 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctacacaaaccctagt 19502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35215777 - 35215836
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  35215777 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatacaaaccctagt 35215836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38020266 - 38020207
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  38020266 gaatcaaccctcaaaccctagtgtttgtttccaagagacaaactctacacaaaccctagt 38020207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 16663480 - 16663420
Alignment:
Q  95 ttggctttgtaaactaatcaaagaaacttgtaaaccaatcaaataaaatctaaattaactg 155  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||| ||||||||||    
T  16663480 ttggctttgtaaactaatcacataaacttttaagccaatcaaataaaatcaaaattaactg 16663420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17849181 - 17849122
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||| ||| |||||    
T  17849181 gaatcaaccctcaaaccctagtgtttcttccaaagaggcaaactctatacgaactctagt 17849122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19504536 - 19504595
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||  |||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  19504536 gaatcaaccaacaaacccttgtgtttgttccgaagagacaaactctatacaaaccctagt 19504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28196701 - 28196642
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| || |||||||| | ||||||||||||||||||||||||||||    
T  28196701 gaatcaacccttaaaccctaatgtttgttgccaagagacaaactctatacaaaccctagt 28196642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35218154 - 35218213
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  35218154 gaatcaacccacaaaccctagtgtttgctcctaagagacaaactctatataaaccctagt 35218213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44289259 - 44289318
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| |||||    
T  44289259 gaatcaaccctcaaaccctagtgtttgttgccaagagacagactctatacaaactctagt 44289318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 5377629 - 5377679
Alignment:
Q  10 ctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| ||||    
T  5377629 ctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccttagt 5377679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27104862 - 27104804
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||| |||||| | ||||||||||||||||||||||||||||    
T  27104862 gaatcaacccacaaaccctagt-tttgtttcgaagagacaaactctatacaaaccctagt 27104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45239168 - 45239226
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||  ||| |||||||||||||||||    
T  45239168 gaatcaaccctcaaaccctagtgtttgttgccaaagag--aaagtctatacaaaccctagt 45239226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13215169 - 13215110
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13215169 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 13215110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38925671 - 38925730
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38925671 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 38925730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 4131573 - 4131631
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4131573 aatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 4131631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2510517 - 2510576
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2510517 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 2510576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2617604 - 2617545
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2617604 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 2617545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6995893 - 6995952
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6995893 gaatcaacccttaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 6995952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13761925 - 13761866
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13761925 gaatcaacccccaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 13761866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15823634 - 15823575
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15823634 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 15823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18307197 - 18307138
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  18307197 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactttatacaaaccctagt 18307138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20291545 - 20291486
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  20291545 gaatcaaccctcaaaacttagtgtttgttccgaagagacaaactctatacaaaccctagt 20291486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21948380 - 21948439
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21948380 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 21948439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24325751 - 24325692
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24325751 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 24325692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47451736 - 47451677
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  47451736 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 47451677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48665265 - 48665206
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  48665265 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatataaaccctagt 48665206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 39932160 - 39932102
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  39932160 aatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 39932102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6756616 - 6756556
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6756616 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 6756556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50307739 - 50307799
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  50307739 gaatcaaccctcaaaccctagtgtttgttgccaaagagacaaactctatacaaaccctagt 50307799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3579809 - 3579868
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  3579809 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 3579868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6823973 - 6823914
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  6823973 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 6823914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9241279 - 9241338
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  9241279 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctatacaaaccctagt 9241338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10400021 - 10400080
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  10400021 gaatcaaccttcaaaccctagtgtttgttcccaagagacaaactctatacaaaccctagt 10400080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12302698 - 12302757
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  12302698 gaatcaaccctcaaaccctagtgtttgttaccaagagacaaactctatacaaaccctagt 12302757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14098163 - 14098222
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  14098163 gaatcaaccctcaaactctagtgtttgttctaaagagacaaactctatacaaaccctagt 14098222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15295027 - 15295086
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  15295027 gaatcaaccctcaaaacctagtgtttgtttcaaagagacaaactctatacaaaccctagt 15295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16226255 - 16226196
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  16226255 gaatcaacccacaaaccctagtgtttgttcctaagagacaaactctatacaaaccctagt 16226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16428741 - 16428682
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  16428741 gaatcaaccctcaaaccttagtgtttgttgtcaagagacaaactctatacaaaccctagt 16428682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17186321 - 17186380
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  17186321 gaatcaaccctcaaaccctagtgtttgttgctaagagacaaactctatacaaaccctagt 17186380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17324829 - 17324884
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccc 56  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17324829 gaatcaaccctcaaaccctagtgtttgttccatagagacaaactctatacaaaccc 17324884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20302547 - 20302488
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  20302547 gaatcaaccctcaaaacctagtgtttgttccgaagagacaaactctatacaaaccctagt 20302488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27339323 - 27339382
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  27339323 gaatcaacccacaaaccctagtgtttgttcctaagagacaaactctatacaaaccctagt 27339382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28840768 - 28840709
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28840768 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 28840709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28842583 - 28842524
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  28842583 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 28842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31735714 - 31735773
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  31735714 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 31735773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39462607 - 39462548
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  39462607 gaatcaaccctaaaaacctagtgtttgttccaaagagacaaactctatacaaaccctagt 39462548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47906358 - 47906299
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||    
T  47906358 gaatcaaccctcaaaacctagtgtttgttccaaagagacaaactctatacaaaccatagt 47906299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50076865 - 50076924
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  50076865 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactttatacaaaccctagt 50076924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50079014 - 50079073
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  50079014 gaatcaaccctcaaaccctagtgtttgttcccaagagacaaactctatgcaaaccctagt 50079073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51750127 - 51750068
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  51750127 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 51750068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46431900 - 46431957
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  46431900 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaacccta 46431957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31425211 - 31425271
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  31425211 gaatcaaccctcaaaccctagtgtttgttgccaaagatacaaactctatacaaaccctagt 31425271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50248765 - 50248813
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctata 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50248765 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctata 50248813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18839675 - 18839616
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||    
T  18839675 gaatcaaccctaaaaccctactgtttgttccaaagagataaactctatacaaaccctagt 18839616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25127960 - 25127901
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||| |||||||||||||||||||||||    
T  25127960 gaatcaaccctcaaaccctagtgtttgtttccaagacacaaactctatacaaaccctagt 25127901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51752453 - 51752396
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacccta 58  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||    
T  51752453 gaatcaaccctcaaaacctagtgtttgttccgaagagacaaactctatacaagcccta 51752396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31490001 - 31489944
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  31490001 gaatcaaccatcaaaccctagtgtttgttccaaagagacaaa--ctatacaaaccctagt 31489944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41646989 - 41646949
Alignment:
Q  20 agtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41646989 agtgtttgttccaaagagacaaactctatacaaaccctagt 41646949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2949424 - 2949483
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||||||||| |||||    
T  2949424 gaatcaaccatcaacccctagtgtttgttcccaagagacaaactctatacaaactctagt 2949483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6823102 - 6823044
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  6823102 gaatcaacccacaaaccctagt-tttgttcctaagagacaaactctatacaaaccctagt 6823044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9459610 - 9459669
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||  ||| ||||||||||||||||||||||||||||    
T  9459610 gaatcaacccacaaaccctagtgttttctcctaagagacaaactctatacaaaccctagt 9459669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9463437 - 9463496
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||  ||| ||||||||||||||||||||||||||||    
T  9463437 gaatcaacccacaaaccctagtgttttctcctaagagacaaactctatacaaaccctagt 9463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25251468 - 25251527
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| | |||||||||||  |||||||||||||||    
T  25251468 gaatcaaccctcaaaccctagtgtttgtttcgaagagacaaacgttatacaaaccctagt 25251527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28207259 - 28207318
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||| ||| |||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  28207259 gaataaactctcaaaccctagtgtttgttccaaagagacaaactttacacaaaccctagt 28207318  T

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Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28998446 - 28998505
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| |||  || |||||||||||||||||||||||||    
T  28998446 gaatcaaccctcaaaccctagtgtttattcgcaaaagacaaactctatacaaaccctagt 28998505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29004162 - 29004221
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||| |||  || |||||||||||||||||||||||||    
T  29004162 gaatcaaccctcaaaccctagtgtttattcgcaaaagacaaactctatacaaaccctagt 29004221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47177450 - 47177391
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||| ||| ||| ||||||||||||||||||||||||||||    
T  47177450 gaatcaacccacaaaccctagtgcttgctcctaagagacaaactctatacaaaccctagt 47177391  T

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Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47179801 - 47179742
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||| ||| ||| ||||||||||||||||||||||||||||    
T  47179801 gaatcaacccacaaaccctagtgcttgctcctaagagacaaactctatacaaaccctagt 47179742  T

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Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40134032 - 40133978
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaacc 55  Q
    ||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||    
T  40134032 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaattctatacaaacc 40133978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17324151 - 17324103
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctata 49  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  17324151 gaatcaaccctcaaaccctagtgtttgttgccaagagacaaactctata 17324103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17318981 - 17318922
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||| || |||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  17318981 gaatcaaccttccaaccctagtgtttgttgccaagagacaaactctaaacaaaccctagt 17318922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27337132 - 27337190
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| |||||||||| |||||| ||||||||||    
T  27337132 gaatcaacccacaaaccctagtgtttgttcctaagagacaaa-tctataaaaaccctagt 27337190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11457668 - 11457727
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||  ||||| | ||||  ||||||||||||||||||||||    
T  11457668 gaatcaaccctcaaaccctagtaattgttgccaagaatcaaactctatacaaaccctagt 11457727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31423066 - 31423126
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||  ||||||| ||||||||  | |||||||||||||||||||| ||||||||||    
T  31423066 gaatcaactttcaaaccctagtgtttaatgccaaagagacaaactctatataaaccctagt 31423126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14573 - 14632
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  14573 gaatcaaccctcaaaccctagtgtttgtttcaaagagacaaactctatacaaaccctagt 14632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15116 - 15057
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||    
T  15116 gaatcaaccctcaaactctagtgtttgttccaaagagacaaactttataaaaaccctagt 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41674 - 41733
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41674 gaatcaacccacaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 41733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 79282 - 79223
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  79282 gaatcaacccttaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 79223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35736 - 35677
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35736 gaattaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaaccctagt 35677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 183831 - 183890
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  183831 gaatcaaccctcaaaccctagtgtttgttccaaagagacaaactctatacaaactctagt 183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 52108 - 52049
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  52108 gaatcaatcctcaaaccctagtgtttgttccaaaaagacaaactctatacaaaccctagt 52049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 11665 - 11723
Alignment:
Q  2 aatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  11665 aatcaaccctcaaaccctagtgtttgttcgaaagagacaaactctatacaaaccctagt 11723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6296 - 6237
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  6296 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 6237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 138 - 79
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  138 gaatcaacccacaaaccctagtgtttgttcctaagagacaaactctatacaaaccctagt 79  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2977 - 2918
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2977 gaatcaacccacaaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 85327 - 85268
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  85327 gaatcaaccctcaaactttagtgtttgttgctaagagacaaactctatacaaaccctagt 85268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4093 - 4035
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  4093 gaatcaaccctcaaaccctagtgttagttccaaagagacaaact-tatacaaaccctagt 4035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29268 - 29209
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  29268 gaatcaacccataaaccctagtgtttgttccgaagagacaaactctatacaaaccctagt 29209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 79957 - 79897
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgtt-ccaaagagacaaactctatacaaaccctagt 60  Q
    ||||||||||||||||| || | |||||| |||||||||||||||||||||||||||||||    
T  79957 gaatcaaccctcaaaccctaatttttgttgccaaagagacaaactctatacaaaccctagt 79897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2138 - 2080
Alignment:
Q  1 gaatcaaccctcaaaccttagtgtttgttccaaagagacaaactctatacaaaccctagt 60  Q
    |||||||||| |||||| |||| ||| |||| |||||||||||||| |||||||||||||    
T  2138 gaatcaacccacaaaccctagt-tttattccgaagagacaaactctgtacaaaccctagt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 1019 - 1081
Alignment:
Q  3 atcaaccctcaaaccttagtgtttgttccaaa-----gagacaaactctatacaaaccctagt 60  Q
    |||||||||| || | ||||||||||||||||     ||||||||||||||||||||||||||    
T  1019 atcaaccctccaaacgtagtgtttgttccaaactaaagagacaaactctatacaaaccctagt 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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