View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16453_low_8 (Length: 506)

Name: NF16453_low_8
Description: NF16453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16453_low_8
NF16453_low_8
[»] chr3 (69 HSPs)
chr3 (10-488)||(1177997-1178477)
chr3 (244-379)||(30807152-30807290)
chr3 (244-379)||(25289714-25289851)
chr3 (240-378)||(39041852-39041993)
chr3 (244-378)||(49258262-49258399)
chr3 (244-379)||(15566499-15566636)
chr3 (259-379)||(10083818-10083941)
chr3 (244-378)||(52821636-52821772)
chr3 (244-379)||(8456149-8456287)
chr3 (239-378)||(18176887-18177029)
chr3 (256-379)||(26174185-26174311)
chr3 (244-379)||(40133448-40133586)
chr3 (244-379)||(53233910-53234047)
chr3 (244-378)||(35492971-35493108)
chr3 (245-379)||(45272415-45272552)
chr3 (244-379)||(53424176-53424313)
chr3 (259-379)||(10190741-10190864)
chr3 (244-379)||(46576408-46576546)
chr3 (244-379)||(8097278-8097416)
chr3 (244-379)||(30257684-30257822)
chr3 (244-379)||(45529754-45529891)
chr3 (244-378)||(21363003-21363140)
chr3 (240-378)||(32151480-32151621)
chr3 (245-378)||(24407322-24407458)
chr3 (277-379)||(24165714-24165817)
chr3 (256-379)||(48977460-48977586)
chr3 (259-377)||(25379836-25379957)
chr3 (240-378)||(33398468-33398609)
chr3 (244-378)||(34492575-34492712)
chr3 (297-378)||(7485531-7485613)
chr3 (293-377)||(48104986-48105073)
chr3 (321-379)||(53848433-53848492)
chr3 (278-377)||(21776510-21776611)
chr3 (277-379)||(25344057-25344160)
chr3 (247-341)||(1242036-1242132)
chr3 (244-379)||(2511296-2511434)
chr3 (244-379)||(40940885-40941023)
chr3 (257-378)||(50731237-50731358)
chr3 (257-378)||(50781496-50781617)
chr3 (311-378)||(25017618-25017685)
chr3 (240-370)||(4252404-4252537)
chr3 (256-379)||(7195886-7196005)
chr3 (256-379)||(8958034-8958161)
chr3 (244-379)||(51532849-51532987)
chr3 (244-379)||(52455648-52455786)
chr3 (244-335)||(26108352-26108445)
chr3 (279-378)||(54475777-54475878)
chr3 (263-378)||(1692913-1693030)
chr3 (321-378)||(4048089-4048147)
chr3 (256-378)||(31537838-31537963)
chr3 (261-353)||(34844455-34844549)
chr3 (331-379)||(3747730-3747779)
chr3 (244-312)||(8455971-8456038)
chr3 (256-360)||(29915288-29915394)
chr3 (256-360)||(29964441-29964547)
chr3 (260-353)||(50583068-50583163)
chr3 (321-370)||(55371302-55371352)
chr3 (244-378)||(4462693-4462829)
chr3 (266-379)||(32094756-32094872)
chr3 (256-300)||(7203213-7203257)
chr3 (339-379)||(11390760-11390800)
chr3 (321-373)||(30695251-30695303)
chr3 (239-371)||(49167111-49167249)
chr3 (260-341)||(7470254-7470336)
chr3 (257-373)||(26158891-26159003)
chr3 (258-308)||(53167737-53167787)
chr3 (263-316)||(24460065-24460118)
chr3 (244-312)||(10682884-10682952)
chr3 (270-310)||(36660859-36660899)
[»] chr5 (60 HSPs)
chr5 (244-378)||(19145412-19145548)
chr5 (256-379)||(19456210-19456335)
chr5 (244-379)||(27498730-27498868)
chr5 (240-379)||(33709502-33709642)
chr5 (244-379)||(38684268-38684405)
chr5 (256-379)||(8484660-8484786)
chr5 (256-378)||(11926501-11926627)
chr5 (244-379)||(15641105-15641242)
chr5 (244-379)||(18207267-18207405)
chr5 (244-379)||(30485888-30486026)
chr5 (256-379)||(32059439-32059565)
chr5 (259-379)||(35425088-35425211)
chr5 (244-379)||(7085625-7085763)
chr5 (244-378)||(34310202-34310339)
chr5 (240-379)||(4603833-4603975)
chr5 (263-378)||(9659311-9659429)
chr5 (256-379)||(10869564-10869690)
chr5 (293-379)||(41351103-41351191)
chr5 (260-369)||(42193561-42193671)
chr5 (244-379)||(37495107-37495252)
chr5 (256-373)||(11464913-11465032)
chr5 (257-378)||(27487554-27487679)
chr5 (256-378)||(6014280-6014405)
chr5 (258-353)||(16247026-16247124)
chr5 (249-379)||(31206307-31206441)
chr5 (321-378)||(22693074-22693132)
chr5 (244-378)||(36895485-36895622)
chr5 (256-378)||(25750613-25750734)
chr5 (244-379)||(21236361-21236499)
chr5 (244-379)||(31287945-31288083)
chr5 (321-379)||(38630978-38631037)
chr5 (293-379)||(22392797-22392886)
chr5 (244-312)||(2499247-2499315)
chr5 (328-379)||(10631288-10631340)
chr5 (260-378)||(23270522-23270643)
chr5 (240-302)||(10824038-10824100)
chr5 (321-379)||(12317154-12317212)
chr5 (256-378)||(5049209-5049333)
chr5 (277-378)||(13659245-13659348)
chr5 (291-379)||(8821091-8821182)
chr5 (311-367)||(5067390-5067447)
chr5 (248-369)||(10076776-10076900)
chr5 (262-378)||(15485291-15485411)
chr5 (256-308)||(25587004-25587056)
chr5 (277-378)||(34049905-34050008)
chr5 (244-379)||(12398447-12398585)
chr5 (244-308)||(15931119-15931182)
chr5 (244-379)||(26009263-26009401)
chr5 (277-378)||(10813851-10813954)
chr5 (299-370)||(13038463-13038537)
chr5 (255-370)||(18172861-18172979)
chr5 (325-379)||(25548533-25548588)
chr5 (244-370)||(36954878-36955007)
chr5 (321-370)||(13108458-13108508)
chr5 (321-378)||(41084122-41084180)
chr5 (292-349)||(27569459-27569516)
chr5 (326-378)||(28614486-28614539)
chr5 (272-304)||(3586308-3586340)
chr5 (339-379)||(3599997-3600037)
chr5 (346-378)||(7151468-7151500)
[»] scaffold0070 (1 HSPs)
scaffold0070 (244-379)||(40385-40522)
[»] chr4 (67 HSPs)
chr4 (244-379)||(34844757-34844895)
chr4 (244-379)||(40058851-40058989)
chr4 (244-379)||(5609201-5609339)
chr4 (248-377)||(25969504-25969633)
chr4 (244-377)||(52983679-52983815)
chr4 (244-379)||(27528794-27528932)
chr4 (256-379)||(32986269-32986395)
chr4 (244-378)||(34723859-34723996)
chr4 (236-378)||(20566402-20566547)
chr4 (256-378)||(33696279-33696404)
chr4 (256-376)||(20077986-20078109)
chr4 (244-378)||(49287918-49288054)
chr4 (244-379)||(7391964-7392100)
chr4 (259-379)||(32990510-32990633)
chr4 (248-379)||(19660531-19660665)
chr4 (240-379)||(44343570-44343712)
chr4 (244-379)||(45787703-45787841)
chr4 (257-379)||(46714466-46714591)
chr4 (244-369)||(9517650-9517778)
chr4 (256-379)||(55961753-55961878)
chr4 (259-379)||(54127341-54127464)
chr4 (244-379)||(18875516-18875653)
chr4 (244-378)||(25852274-25852412)
chr4 (260-378)||(35229243-35229365)
chr4 (257-339)||(25445279-25445359)
chr4 (244-373)||(32942430-32942562)
chr4 (248-378)||(13716450-13716583)
chr4 (256-379)||(28791187-28791312)
chr4 (244-379)||(36131509-36131647)
chr4 (259-377)||(13550283-13550404)
chr4 (244-378)||(51535673-51535818)
chr4 (321-378)||(23639763-23639821)
chr4 (321-378)||(23645421-23645479)
chr4 (321-378)||(52494627-52494685)
chr4 (248-336)||(10125884-10125973)
chr4 (244-378)||(35674749-35674878)
chr4 (269-316)||(42281169-42281216)
chr4 (321-379)||(43719086-43719145)
chr4 (244-378)||(1985896-1986031)
chr4 (313-378)||(4064991-4065057)
chr4 (321-378)||(9978509-9978567)
chr4 (256-378)||(12500059-12500183)
chr4 (263-379)||(21387486-21387603)
chr4 (244-308)||(33992686-33992750)
chr4 (244-378)||(34835589-34835726)
chr4 (314-378)||(37302619-37302684)
chr4 (240-379)||(13584253-13584395)
chr4 (316-379)||(23131435-23131499)
chr4 (293-379)||(27574427-27574516)
chr4 (256-379)||(30879165-30879290)
chr4 (309-378)||(55158343-55158413)
chr4 (244-377)||(24273282-24273418)
chr4 (240-377)||(20527035-20527174)
chr4 (244-304)||(22630263-22630323)
chr4 (244-312)||(37455637-37455704)
chr4 (244-378)||(41085086-41085222)
chr4 (339-378)||(33289212-33289251)
chr4 (256-378)||(51595094-51595219)
chr4 (321-378)||(7093510-7093568)
chr4 (321-378)||(12824539-12824597)
chr4 (321-378)||(17637852-17637909)
chr4 (263-304)||(12710258-12710299)
chr4 (263-304)||(39288938-39288978)
chr4 (256-297)||(41621680-41621721)
chr4 (297-379)||(6427102-6427185)
chr4 (328-379)||(8442049-8442101)
chr4 (346-378)||(24672305-24672337)
[»] chr8 (58 HSPs)
chr8 (244-379)||(4718709-4718847)
chr8 (244-379)||(34237654-34237792)
chr8 (244-378)||(6953008-6953144)
chr8 (244-377)||(28193538-28193674)
chr8 (245-378)||(18128578-18128714)
chr8 (244-379)||(3734622-3734760)
chr8 (244-379)||(8765525-8765663)
chr8 (244-379)||(39349320-39349458)
chr8 (244-378)||(21603294-21603431)
chr8 (244-379)||(2618250-2618388)
chr8 (244-379)||(32879343-32879481)
chr8 (256-379)||(20305984-20306110)
chr8 (256-379)||(21092617-21092743)
chr8 (260-379)||(42328084-42328206)
chr8 (244-377)||(15259407-15259543)
chr8 (240-334)||(21239409-21239503)
chr8 (244-379)||(14633018-14633156)
chr8 (292-379)||(2639410-2639500)
chr8 (245-378)||(42643118-42643254)
chr8 (244-379)||(4698722-4698860)
chr8 (256-378)||(3403502-3403627)
chr8 (256-379)||(19471685-19471812)
chr8 (256-379)||(19542609-19542736)
chr8 (256-379)||(19589960-19590087)
chr8 (244-378)||(20469981-20470117)
chr8 (244-378)||(264400-264536)
chr8 (244-378)||(651385-651521)
chr8 (244-378)||(837120-837256)
chr8 (293-378)||(10292167-10292255)
chr8 (244-378)||(25248413-25248547)
chr8 (240-378)||(12312906-12313046)
chr8 (244-379)||(34610686-34610824)
chr8 (244-379)||(27746334-27746472)
chr8 (253-378)||(2166770-2166897)
chr8 (256-341)||(20505629-20505715)
chr8 (256-371)||(36848757-36848874)
chr8 (263-379)||(1219432-1219551)
chr8 (255-371)||(26168856-26168974)
chr8 (256-379)||(28964109-28964234)
chr8 (256-304)||(34639284-34639332)
chr8 (263-379)||(24018465-24018585)
chr8 (257-369)||(28088363-28088478)
chr8 (263-379)||(18532190-18532300)
chr8 (333-378)||(9713609-9713655)
chr8 (247-325)||(30482605-30482683)
chr8 (240-289)||(8387536-8387585)
chr8 (257-379)||(8042724-8042844)
chr8 (258-352)||(13749133-13749231)
chr8 (256-308)||(28908899-28908951)
chr8 (240-304)||(41070821-41070885)
chr8 (321-379)||(33747025-33747084)
chr8 (297-377)||(7557952-7558034)
chr8 (256-379)||(34694574-34694701)
chr8 (240-289)||(34778798-34778847)
chr8 (260-309)||(38964141-38964190)
chr8 (347-379)||(10544924-10544956)
chr8 (244-304)||(13579980-13580040)
chr8 (328-379)||(33534566-33534618)
[»] chr7 (63 HSPs)
chr7 (244-379)||(22119952-22120090)
chr7 (244-379)||(40542909-40543047)
chr7 (244-379)||(654704-654841)
chr7 (244-379)||(2751335-2751473)
chr7 (244-379)||(21835215-21835353)
chr7 (244-379)||(2103119-2103255)
chr7 (244-378)||(7275341-7275478)
chr7 (240-378)||(17196950-17197091)
chr7 (244-379)||(7175861-7175999)
chr7 (244-379)||(29861734-29861872)
chr7 (244-378)||(41907514-41907650)
chr7 (244-379)||(21217832-21217970)
chr7 (244-379)||(11997913-11998051)
chr7 (245-379)||(16374059-16374196)
chr7 (244-378)||(18044171-18044308)
chr7 (259-379)||(23012507-23012630)
chr7 (244-379)||(10091252-10091389)
chr7 (244-379)||(22703550-22703688)
chr7 (256-379)||(23092172-23092298)
chr7 (244-378)||(28647033-28647170)
chr7 (263-378)||(3851840-3851958)
chr7 (256-379)||(28089892-28090021)
chr7 (256-377)||(19421307-19421431)
chr7 (257-379)||(21574101-21574226)
chr7 (258-379)||(23330738-23330862)
chr7 (240-373)||(1766149-1766284)
chr7 (257-379)||(42913512-42913637)
chr7 (240-379)||(31273974-31274115)
chr7 (256-379)||(2344375-2344501)
chr7 (240-378)||(7262277-7262416)
chr7 (321-378)||(31712902-31712960)
chr7 (244-371)||(17212117-17212247)
chr7 (244-379)||(27312216-27312354)
chr7 (293-377)||(32849704-32849791)
chr7 (259-377)||(9683905-9684026)
chr7 (260-378)||(36772303-36772424)
chr7 (277-379)||(31197688-31197792)
chr7 (244-378)||(39145652-39145789)
chr7 (256-378)||(27009435-27009561)
chr7 (293-377)||(22638401-22638488)
chr7 (257-378)||(27704079-27704202)
chr7 (256-335)||(8435741-8435820)
chr7 (256-378)||(28950947-28951072)
chr7 (259-353)||(23636590-23636687)
chr7 (256-378)||(22696396-22696522)
chr7 (240-379)||(9717986-9718128)
chr7 (244-304)||(35476405-35476465)
chr7 (321-378)||(25333546-25333603)
chr7 (247-379)||(13332433-13332557)
chr7 (259-354)||(21373789-21373887)
chr7 (240-276)||(28136252-28136288)
chr7 (244-316)||(36173099-36173171)
chr7 (240-379)||(43785298-43785440)
chr7 (244-287)||(47380962-47381005)
chr7 (292-378)||(48199383-48199470)
chr7 (260-310)||(1469192-1469242)
chr7 (341-379)||(22299966-22300004)
chr7 (256-354)||(11909978-11910079)
chr7 (326-378)||(25102809-25102862)
chr7 (324-376)||(30345511-30345564)
chr7 (321-378)||(47381034-47381091)
chr7 (240-276)||(22299909-22299945)
chr7 (244-311)||(42814928-42814995)
[»] chr6 (34 HSPs)
chr6 (244-379)||(34147406-34147544)
chr6 (244-379)||(34160022-34160160)
chr6 (244-379)||(21982320-21982457)
chr6 (244-379)||(3222635-3222772)
chr6 (244-378)||(9208312-9208449)
chr6 (244-379)||(15360097-15360235)
chr6 (244-378)||(11448931-11449068)
chr6 (244-378)||(654146-654283)
chr6 (244-377)||(9239035-9239171)
chr6 (240-379)||(21148510-21148651)
chr6 (244-379)||(1344995-1345133)
chr6 (263-378)||(9690638-9690756)
chr6 (256-378)||(33499547-33499672)
chr6 (260-378)||(5360071-5360192)
chr6 (244-378)||(28672127-28672264)
chr6 (244-379)||(12390485-12390620)
chr6 (257-376)||(10377788-10377911)
chr6 (240-379)||(17081053-17081195)
chr6 (297-378)||(15730495-15730579)
chr6 (256-379)||(9844010-9844136)
chr6 (244-376)||(17149458-17149593)
chr6 (263-378)||(14504082-14504200)
chr6 (310-379)||(14213010-14213080)
chr6 (246-378)||(11840963-11841097)
chr6 (263-379)||(11007244-11007363)
chr6 (256-378)||(17225739-17225863)
chr6 (258-335)||(6383919-6383998)
chr6 (259-379)||(21903618-21903748)
chr6 (240-301)||(3907597-3907657)
chr6 (292-379)||(17706318-17706408)
chr6 (346-379)||(7491665-7491698)
chr6 (244-308)||(12591697-12591761)
chr6 (321-369)||(33718478-33718527)
chr6 (243-275)||(9583432-9583464)
[»] chr2 (60 HSPs)
chr2 (244-379)||(44946052-44946190)
chr2 (244-379)||(24196064-24196200)
chr2 (244-378)||(30466830-30466967)
chr2 (244-379)||(33827572-33827710)
chr2 (244-379)||(35171860-35171998)
chr2 (244-379)||(2140485-2140620)
chr2 (257-379)||(28668946-28669071)
chr2 (257-378)||(11941210-11941334)
chr2 (244-379)||(8192351-8192488)
chr2 (244-378)||(17324826-17324961)
chr2 (244-379)||(15038019-15038157)
chr2 (264-379)||(34516413-34516530)
chr2 (256-378)||(36390569-36390693)
chr2 (244-379)||(43374329-43374462)
chr2 (244-312)||(4618754-4618822)
chr2 (244-371)||(36242319-36242449)
chr2 (267-379)||(19054108-19054224)
chr2 (245-342)||(26176235-26176333)
chr2 (245-378)||(41329904-41330039)
chr2 (258-378)||(27269344-27269467)
chr2 (245-379)||(3943801-3943938)
chr2 (313-379)||(18692091-18692158)
chr2 (244-359)||(44976172-44976291)
chr2 (244-378)||(13266550-13266686)
chr2 (295-378)||(25293269-25293356)
chr2 (244-379)||(5394077-5394215)
chr2 (256-378)||(19174835-19174959)
chr2 (244-378)||(10581995-10582127)
chr2 (244-379)||(41314052-41314189)
chr2 (244-289)||(28194225-28194270)
chr2 (244-378)||(14946839-14946975)
chr2 (264-378)||(19605846-19605962)
chr2 (256-379)||(4567428-4567562)
chr2 (321-379)||(14486964-14487023)
chr2 (321-379)||(18976454-18976513)
chr2 (321-379)||(39957897-39957956)
chr2 (293-378)||(31778140-31778228)
chr2 (293-378)||(44610148-44610236)
chr2 (244-379)||(8258957-8259095)
chr2 (258-310)||(13747576-13747628)
chr2 (339-379)||(27290732-27290772)
chr2 (295-371)||(45132398-45132477)
chr2 (245-378)||(6006890-6007025)
chr2 (258-316)||(27290662-27290720)
chr2 (245-299)||(12543205-12543259)
chr2 (321-378)||(44929846-44929904)
chr2 (244-309)||(35797522-35797587)
chr2 (244-308)||(45271444-45271508)
chr2 (240-296)||(30943152-30943208)
chr2 (263-369)||(9641101-9641208)
chr2 (244-287)||(19525490-19525533)
chr2 (265-378)||(38784181-38784295)
chr2 (331-379)||(1501463-1501511)
chr2 (310-378)||(4852657-4852726)
chr2 (256-312)||(23787077-23787133)
chr2 (256-289)||(40591255-40591288)
chr2 (244-308)||(3405225-3405289)
chr2 (260-316)||(16510305-16510361)
chr2 (324-379)||(28194137-28194193)
chr2 (256-300)||(29698219-29698263)
[»] chr1 (63 HSPs)
chr1 (244-379)||(4621236-4621374)
chr1 (244-379)||(15059401-15059539)
chr1 (244-378)||(24122083-24122220)
chr1 (244-378)||(9500355-9500492)
chr1 (244-378)||(24674453-24674590)
chr1 (259-377)||(17935844-17935965)
chr1 (244-379)||(32729605-32729742)
chr1 (244-379)||(7766726-7766864)
chr1 (244-379)||(27454863-27455003)
chr1 (244-378)||(7197247-7197383)
chr1 (244-376)||(8077707-8077841)
chr1 (244-379)||(8254751-8254889)
chr1 (256-379)||(30677248-30677374)
chr1 (256-374)||(1378970-1379090)
chr1 (244-379)||(46607870-46608008)
chr1 (244-379)||(7578469-7578607)
chr1 (295-377)||(37351454-37351538)
chr1 (293-378)||(26513148-26513235)
chr1 (244-378)||(36155888-36156025)
chr1 (244-373)||(18646913-18647045)
chr1 (277-377)||(36921513-36921616)
chr1 (248-353)||(37047056-37047164)
chr1 (244-300)||(19034467-19034523)
chr1 (248-378)||(40802069-40802200)
chr1 (240-341)||(7946900-7947002)
chr1 (244-378)||(1486478-1486617)
chr1 (244-379)||(23734176-23734315)
chr1 (244-379)||(23741368-23741507)
chr1 (292-377)||(34778447-34778535)
chr1 (263-370)||(8779744-8779854)
chr1 (256-378)||(16539680-16539804)
chr1 (246-378)||(31162812-31162947)
chr1 (245-353)||(19480595-19480708)
chr1 (240-379)||(39714649-39714791)
chr1 (244-378)||(45859043-45859180)
chr1 (321-379)||(48699898-48699957)
chr1 (244-351)||(1138639-1138748)
chr1 (244-301)||(16899563-16899620)
chr1 (244-340)||(23232300-23232402)
chr1 (254-378)||(809292-809419)
chr1 (339-379)||(14603954-14603994)
chr1 (244-300)||(25237070-25237126)
chr1 (257-379)||(27159159-27159283)
chr1 (256-312)||(34965401-34965457)
chr1 (242-368)||(43769975-43770103)
chr1 (257-378)||(45331621-45331746)
chr1 (257-312)||(20907330-20907385)
chr1 (321-379)||(22910010-22910069)
chr1 (328-378)||(23041668-23041719)
chr1 (260-310)||(2783065-2783115)
chr1 (329-378)||(5315478-5315528)
chr1 (244-373)||(21726789-21726921)
chr1 (321-378)||(35138127-35138185)
chr1 (259-370)||(40145889-40146008)
chr1 (256-296)||(1095088-1095128)
chr1 (260-379)||(2272420-2272542)
chr1 (257-309)||(20999235-20999287)
chr1 (248-312)||(40397342-40397406)
chr1 (248-341)||(17447338-17447432)
chr1 (259-379)||(26986084-26986206)
chr1 (263-316)||(47360450-47360503)
chr1 (240-276)||(6127963-6127999)
chr1 (240-276)||(31605824-31605860)
[»] scaffold0576 (1 HSPs)
scaffold0576 (244-379)||(5081-5219)
[»] scaffold0102 (1 HSPs)
scaffold0102 (240-379)||(39148-39290)
[»] scaffold0019 (1 HSPs)
scaffold0019 (244-379)||(161869-162007)
[»] scaffold0217 (1 HSPs)
scaffold0217 (244-378)||(7309-7446)
[»] scaffold0051 (1 HSPs)
scaffold0051 (244-379)||(52870-53008)
[»] scaffold0366 (2 HSPs)
scaffold0366 (244-379)||(9299-9436)
scaffold0366 (256-379)||(12000-12125)
[»] scaffold0623 (1 HSPs)
scaffold0623 (244-378)||(1057-1193)
[»] scaffold0459 (1 HSPs)
scaffold0459 (256-379)||(10694-10818)
[»] scaffold0016 (1 HSPs)
scaffold0016 (256-379)||(32360-32485)
[»] scaffold0026 (1 HSPs)
scaffold0026 (244-378)||(97366-97503)
[»] scaffold0049 (1 HSPs)
scaffold0049 (293-378)||(66863-66951)
[»] scaffold0160 (1 HSPs)
scaffold0160 (244-378)||(29143-29279)
[»] scaffold0328 (2 HSPs)
scaffold0328 (256-369)||(15063-15178)
scaffold0328 (244-378)||(13047-13181)
[»] scaffold0199 (2 HSPs)
scaffold0199 (321-378)||(8451-8509)
scaffold0199 (244-280)||(8508-8544)
[»] scaffold1175 (1 HSPs)
scaffold1175 (277-378)||(2426-2529)
[»] scaffold0157 (1 HSPs)
scaffold0157 (256-378)||(20294-20418)
[»] scaffold0068 (1 HSPs)
scaffold0068 (244-379)||(41644-41781)
[»] scaffold0020 (2 HSPs)
scaffold0020 (310-378)||(123066-123134)
scaffold0020 (244-286)||(123146-123188)
[»] scaffold0717 (1 HSPs)
scaffold0717 (263-336)||(1-76)


Alignment Details
Target: chr3 (Bit Score: 436; Significance: 0; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 10 - 488
Target Start/End: Original strand, 1177997 - 1178477
Alignment:
Q  10 ataattctatattggaagaagaatccaagaacaaccagtcttattattatgatcatacggtaaggattgatttgacttgatggaattggcaacttccttg 109  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1177997 ataattctatattggaagaagaatccaagaacaatcagtcttattattatgatcatacggtaaggattgatttgacttgatggaattggcaacttccttg 1178096  T
Q  110 acaatggttgccttgattcatccattctgatcattttcacaagaaaatgcaaaatctcattagaaaa-caattgtgtttatgcatccatgtataatcttc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1178097 acaatggttgccttgattcatccattctgatcattttcacaagaaaatgcaaaatctcattagaaaaccaattgtgtttatgcatccatgtataatcttc 1178196  T
Q  209 attttaatgctagttttcttttagaaagtgatcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 308  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178197 attttaatgctagttttcttttagaaagtgatcaggttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 1178296  T
Q  309 t-gggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttcnnnnnnncaaagaaagtgatacttacaa 407  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  1178297 tggggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttcaaaaaaacaaagaaagtgatacttacaa 1178396  T
Q  408 aggaaattcattgtcatcatccacactcttatccaagtcttcattatcatcttttctcatattaccaagttggttctgtct 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178397 aggaaattcattgtcatcatccacactcttatccaagtcttcattatcatcttttctcatattaccaagttggttctgtct 1178477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 30807290 - 30807152
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 339  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||||| |||||||||    
T  30807290 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcggtaggattggtc 30807192  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30807191 cctcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 25289851 - 25289714
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  25289851 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 25289753  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  25289752 ctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 240 - 378
Target Start/End: Complemental strand, 39041993 - 39041852
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||| ||| |||||||||||||| |||  |||| || ||||| ||||||||||    
T  39041993 tcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattg 39041895  T
Q  337 gtcc-ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  39041894 gtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 49258399 - 49258262
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  49258399 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggcggtgggattggtcc 49258301  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  49258300 cctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 15566636 - 15566499
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || |||||||||||||||||||||    
T  15566636 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtccc 15566538  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     || |||||||||| ||||||||||||||||||||||||    
T  15566537 ctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 10083941 - 10083818
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| |||| |||||||||||||||| |||||||||||||    
T  10083941 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcga 10083843  T
Q  355 atcttggatcggataccgagttttc 379  Q
     ||||||||||||||||||||||||    
T  10083842 ttcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 52821772 - 52821636
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 341  Q
    ||||||||| | |||||||||||||||||| || ||||||||||||| ||| |||||||||||||| ||| ||||  | |||||||||||||||||||||    
T  52821772 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggccccgtaagtgggcggtgggattggtccc 52821674  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||||||||||||| |||||||||||||||||||||||    
T  52821673 ctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 8456287 - 8456149
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||| |||||||||||||    
T  8456287 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcc 8456189  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  8456188 cctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 18177029 - 18176887
Alignment:
Q  239 atcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 335  Q
    |||| ||||||||| | ||||||||||||||||||| | ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||    
T  18177029 atcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggatt 18176931  T
Q  336 ggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||    
T  18176930 ggtcccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 26174185 - 26174311
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||| ||  |||| || ||||||||||||||||||||| ||||||||||    
T  26174185 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagt 26174283  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| ||||||||||||||||||||||||    
T  26174284 cgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 40133586 - 40133448
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40133586 gttcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40133488  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  40133487 cctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 53234047 - 53233910
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| |||| |||  |||| || |||||||||||||||||| |    
T  53234047 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcc 53233949  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  53233948 cctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 35492971 - 35493108
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  35492971 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35493069  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||| | ||||||||||||    
T  35493070 cctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 245 - 379
Target Start/End: Complemental strand, 45272552 - 45272415
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 341  Q
    |||||||| | ||||||||||||||||||||| |||||||||| || ||| |||||||||||||| |||  |||| || |||||||||||||||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 45272454  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     |||||||||| || ||||||||||||||||||||||||    
T  45272453 ctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 53424313 - 53424176
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||||  |||||| |||||||||| |||||||  || ||| |||||||||||||||||    
T  53424313 gttcgattccctttggtgccaatttcggtgggctaagtccatacagag-tttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtccc 53424215  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  53424214 ctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 10190864 - 10190741
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||| |||||||||||||||| |||||||||||||    
T  10190864 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcga 10190766  T
Q  355 atcttggatcggataccgagttttc 379  Q
     ||||||||||||||||||||||||    
T  10190765 ttcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 46576408 - 46576546
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||| ||||||||||    
T  46576408 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtcggattggtcc 46576506  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  46576507 ccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 8097416 - 8097278
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || |||| ||||||| ||||| ||||||||||||| | | |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  8097416 gttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 8097318  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  8097317 cctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 30257684 - 30257822
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||| ||| | ||||||||||||| ||| ||||||||||||||||||  |||| || ||||||||||| ||||||||    
T  30257684 gttcgattccctttggtgccaatttcgatggactaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcc 30257782  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||||||||||||| |||||    
T  30257783 cctcggattagtcgattcttggatcggataccgaattttc 30257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 45529891 - 45529754
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-c 339  Q
    ||||||||| | |||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  |||||||||||||||||| |    
T  45529891 gttcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 45529793  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  45529792 cctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 21363003 - 21363140
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | |||||| |||||||||| ||| ||||||||||||| ||| |||||||||||||| ||   |||| || |||||||||||||||||| |    
T  21363003 gttcgattccctctggtgtcaatttcggtaggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggttc 21363101  T
Q  340 cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  21363102 cctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 32151480 - 32151621
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    |||| |||||||||| || |||||||||||||||||| |||  |||||||| ||| |||||||||||||| |||  |||| || |||||||||| |||||    
T  32151480 tcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgagattg 32151578  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  32151579 gtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 24407322 - 24407458
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc 341  Q
    |||||||||| ||||||| ||||||||||||  ||||  |||||||| ||||||||| ||||||| ||| ||  | || |||||||||||||||||||||    
T  24407322 ttcgattctctctggtgctaatttcggtgggttaagtatatacagaa-tttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtccc 24407420  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||||||||||||| |||||||||||||||||||||||    
T  24407421 ctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 24165817 - 24165714
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgag 374  Q
    ||||||||||||| ||| |||||||||||||| ||| |||| || |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  24165817 aagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgag 24165719  T
Q  375 ttttc 379  Q
    |||||    
T  24165718 ttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 48977460 - 48977586
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||||||||||||||||| ||||||||||    
T  48977460 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagt 48977558  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||   |||||||||||||||||||||||    
T  48977559 cggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 25379836 - 25379957
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    ||||||||||||| |||| ||||||||||||| ||| |||||||||||||| |||  |||| || | ||||||||||||||||||| |||||||||||||    
T  25379836 gtgccaatttcggagggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcga 25379934  T
Q  355 atcttggatcggataccgagttt 377  Q
     ||||||||||||||| ||||||    
T  25379935 ttcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 378
Target Start/End: Complemental strand, 33398609 - 33398468
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | || |||||||||| ||||||  | ||||||||||| ||| ||||| |||||||| |||  |||| || ||||||||||||||||    
T  33398609 tcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagctt-gctctagctttaaacggggcccccgcaagtgggcggtgggattg 33398511  T
Q  337 gt-ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    || |||||| ||||||||| |||||||||||||||||| ||||    
T  33398510 gttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 34492712 - 34492575
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||| ||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 34492614  T
Q  341 ct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
     | | ||||||| || ||||||||| |||||||||||||    
T  34492613 attcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 7485613 - 7485531
Alignment:
Q  297 tctggctttaaatgggcccca-cacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||  ||||||  || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7485613 tctggctttaaacaggcccctgcaagtggccggtgggattggtccctcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 48104986 - 48105073
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttt 377  Q
    ||||||||||||||||  ||  ||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48104986 ttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 53848492 - 53848433
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  53848492 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 377
Target Start/End: Original strand, 21776510 - 21776611
Alignment:
Q  278 agtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagt 375  Q
    |||||||||||||||||||||||||||||||||||  ||||||   ||| |||||| |||||||||  |||||||||||  ||||||  |||||||||||    
T  21776510 agtccatacagaactttgctctggctttaaatgggctccccactaatggacggtggaattggtccccgggattagtcgatccttggaatggataccgagt 21776609  T
Q  376 tt 377  Q
    ||    
T  21776610 tt 21776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 379
Target Start/End: Complemental strand, 25344160 - 25344057
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgag 374  Q
    |||||||||||||  ||||||||||||||||| ||| ||| | |  ||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||    
T  25344160 aagtccatacagag-tttgctctggctttaaacggggcccccgctagtgggcgatgggattggttcctcggattagtcgattcttagatcgaataccgag 25344062  T
Q  375 ttttc 379  Q
    |||||    
T  25344061 ttttc 25344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 1242036 - 1242132
Alignment:
Q  247 cgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattggtccc 341  Q
    |||||| | ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||  ||| ||| || ||||||||||| |||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtccc 1242132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 2511434 - 2511296
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc- 339  Q
    ||||||||| | ||||||||||||||||||||| |||| |||||||| | | |||||| ||||||| |||  | || || |||||||||||||||||||     
T  2511434 gttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-tcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtct 2511336  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| |||||| || ||||| |||||||||| |||||||    
T  2511335 cctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 40940885 - 40941023
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||||| | |||||||| ||||||| |||  ||||||| ||||| ||| |||||||| |    
T  40940885 gttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcc 40940983  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| |||| || | ||||| ||| ||||||||||||||    
T  40940984 cctcgaattactcaattcttgaatcagataccgagttttc 40941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 50731358 - 50731237
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||| ||||||||||||| |||||||||| ||| |   |||||| |||  || |||||| |||| ||||||||||||||||||||| || ||||||||||    
T  50731358 tggtaccaatttcggtggacaagtccatatagagca--gctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcga 50731261  T
Q  355 atcttggatcggataccgagtttt 378  Q
      ||||||||||||||||||||||    
T  50731260 tccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 378
Target Start/End: Original strand, 50781496 - 50781617
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||| ||||||||||||| |||||||||| ||| |   |||||| |||  || |||||| |||| ||||||||||||||||||||| || ||||||||||    
T  50781496 tggtaccaatttcggtggacaagtccatatagagca--gctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcga 50781593  T
Q  355 atcttggatcggataccgagtttt 378  Q
      ||||||||||||||||||||||    
T  50781594 tccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 25017618 - 25017685
Alignment:
Q  311 ggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  25017618 ggccccgcaagtgggcggtgggattggttccttggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 370
Target Start/End: Complemental strand, 4252537 - 4252404
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattgg 337  Q
    ||||||| ||||| | |||||||||||||| |||  |||||||||||| | |||| |||||| ||  || ||   ||||||| |||| ||||||||||||    
T  4252537 tcaagtttgattccctctggtgccaatttcagtgatcaagtccatacaaagctttactctggtttagaacggcccccccacaagtggacggtgggattgg 4252438  T
Q  338 t-ccctcggattagtcgaatcttggatcggatac 370  Q
    | ||||||||||||||||  ||||||||||||||    
T  4252437 tcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 7195886 - 7196005
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-ccctcggattagtc 352  Q
    ||||||| ||||||||| |||||||||||||||       ||||| ||||||||||||||| |||  |||||| ||||||||||| ||||| ||||||||    
T  7195886 ctggtgctaatttcggtcggcaagtccatacag-------ctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtc 7195978  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || |||| |||  ||||||||||||||    
T  7195979 gattctttgattagataccgagttttc 7196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 8958161 - 8958034
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tggg--ccccacacgtgggcggtgggattggtccc-tcggattag 350  Q
    |||||| |||||| ||||||| ||||||||||| | ||| ||||| |||||||| ||||  |||| || ||||||||||||||||||||| || |||||     
T  8958161 ctggtgtcaattttggtgggctaagtccatacaaagctt-gctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaa 8958063  T
Q  351 tcgaatcttggatcggataccgagttttc 379  Q
    |||| ||||||||| ||||||||||||||    
T  8958062 tcgattcttggatcagataccgagttttc 8958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 51532849 - 51532987
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||||| ||  ||||||||||||||||| ||||||||||||| | |||||||  |||||||||||  |||| || |||| ||||||||||||| |    
T  51532849 gttcgattctctctaatgccaatttcggtgggctaagtccatacagagc-ttgctctaactttaaatgggacccccgcaagtggacggtgggattggtcc 51532947  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| |||||||||  |||||   || |||||||||||||    
T  51532948 cctcagattagtcggttcttgatccgaataccgagttttc 51532987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 52455786 - 52455648
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||| | ||||| ||||| | ||||| ||| |||||| ||||||| |||  |||| || |||   ||||||||||||||    
T  52455786 gttcgattccctctggtgccaattttgatgggctaagtctacacagagctt-gctctgactttaaacggggcccccgcaagtgactggtgggattggtcc 52455688  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||| |||||||||||||||    
T  52455687 cctcggattagtcgattcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 26108352 - 26108445
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 335  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||  |||| || |||||| ||||||||    
T  26108352 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 378
Target Start/End: Original strand, 54475777 - 54475878
Alignment:
Q  279 gtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagt 375  Q
    ||||||||||| ||| ||| |||||||||| ||| ||  | || ||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  54475777 gtccatacagagctt-gctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagt 54475875  T
Q  376 ttt 378  Q
    |||    
T  54475876 ttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 1692913 - 1693030
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatctt 359  Q
    |||||||||||| | ||||| ||||||||||| |||||||||||| |  ||||||  || ||||||||||||||| | ||| || |||||||||| ||||    
T  1692913 caatttcggtggactaagtctatacagaactt-gctctggctttagacaggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattctt 1693011  T
Q  360 ggatcggataccgagtttt 378  Q
    | |||||||||||||||||    
T  1693012 gaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 4048089 - 4048147
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||||| |||||||||| || |||||||||||||||||||||||    
T  4048089 gtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 31537963 - 31537838
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg-gcccca-cacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||| ||||||| ||||| ||||||| |||  ||||||||||||| || |||||  || |||||||||| |||||||||| ||| ||||||    
T  31537963 ctggtgccaattttggtgggctaagtctatacagagctta-ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagt 31537865  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    | | |||||||||||||| ||||||||    
T  31537864 caattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 34844455 - 34844549
Alignment:
Q  261 gccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtcg 353  Q
    |||||||||||||| | ||| |||||||| ||||||| |||||||||||||| |||| || ||||  |||||||||||  |||||||||||||||    
T  34844455 gccaatttcggtggactagtacatacagagctttgctatggctttaaatgggcccccgcaagtggatggtgggattggacccctcggattagtcg 34844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  331 ggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 8456038 - 8455971
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||||| || || ||||||| | |||||||||||||||| ||| ||||||||||||||||||||    
T  8456038 gttcgattctctctagtaccaattttgatgggcaagtccatacataac-ttgctctggctttaaatggg 8455971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 29915394 - 29915288
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||||||| ||||||||||| |||| |||||||| ||| || ||||||||||| |||||||  || |||||||||||||||| |||| ||| |||||||    
T  29915394 ctggtgccattttcggtgggctaagtacatacagagctt-gccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtc 29915296  T
Q  353 gaatcttg 360  Q
    || |||||    
T  29915295 gattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 29964547 - 29964441
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||||||| ||||||||||| |||| |||||||| ||| || ||||||||||| |||||||  || |||||||||||||||| |||| ||| |||||||    
T  29964547 ctggtgccattttcggtgggctaagtacatacagagctt-gccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtc 29964449  T
Q  353 gaatcttg 360  Q
    || |||||    
T  29964448 gattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 50583068 - 50583163
Alignment:
Q  260 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtcc-ctcggattagtcg 353  Q
    ||||||||||| |||| ||||||||||| ||||||| | || |||||||||| |||||  | ||| |||||||||||||||| |||| ||||||||    
T  50583068 tgccaatttcgttgggtaagtccatacaaaactttgatttgactttaaatggagccccgtaagtgagcggtgggattggtcctctcgaattagtcg 50583163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 55371352 - 55371302
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 370  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  55371352 gtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 4462693 - 4462829
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc- 340  Q
    ||||||||| | ||||  ||||||||| ||||| |||| |||||||| |||  |||| |||||||| ||| |||| || |||| ||||||||||| |||     
T  4462693 gttcgattccctctggcaccaatttcgatgggctaagttcatacagagctta-ctctagctttaaacggggccccgcaagtggacggtgggattgatcca 4462791  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||  | |||||||| ||||||||||||||    
T  4462792 ctcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 379
Target Start/End: Complemental strand, 32094872 - 32094756
Alignment:
Q  266 tttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtcc-ctcggattagtcgaatcttgga 362  Q
    ||||||| | ||||| ||||| |||||||| |||| ||||||||||| | | |  | | ||| |||||||||||||| |||  ||||||||  |||||||    
T  32094872 tttcggtagacaagttcatacggaactttgttctgcctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttgga 32094773  T
Q  363 tcggataccgagttttc 379  Q
    |||||||||||||||||    
T  32094772 tcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 7203213 - 7203257
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctg 300  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||    
T  7203213 ctggtgccaatttcggtaggcaagtccatatagagctttgctctg 7203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 11390760 - 11390800
Alignment:
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  11390760 ccctcggattagtcgattcttggatcggatactgagttttc 11390800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 30695303 - 30695251
Alignment:
Q  321 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccga 373  Q
    ||||||| ||||||||||||||| |||||||||   |||||||||||||||||    
T  30695303 gtgggcgatgggattggtccctcagattagtcggtccttggatcggataccga 30695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 49167111 - 49167249
Alignment:
Q  239 atcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaac--tttgctctggctttaaatggg--ccccacacgtgggcggtggga 333  Q
    |||| ||||||||||| |||||| |||||||||||| | ||||||||||| | |  ||||||||||||||||| |||  |||| || ||||| ||||||     
T  49167111 atcaggttcgattctctctggtgtcaatttcggtggactaagtccatacatagcgttttgctctggctttaaacgggacccccgcaagtgggtggtgggg 49167210  T
Q  334 ttgg-tccctcggattagtcgaatcttggatcggatacc 371  Q
    |||| ||||| | ||||||||  || |||||| ||||||    
T  49167211 ttggttcccttgaattagtcggttcatggatcagatacc 49167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 7470336 - 7470254
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||||||| ||| |||  || |||||| ||||||||||||||    
T  7470336 tgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggccctgcaagtgggcagtgggattggtccc 7470254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 373
Target Start/End: Original strand, 26158891 - 26159003
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcg 353  Q
    ||||||||||||||||||| ||||||||||||       |||||||||  || ||   |||| || |||||||||||||||| |||| ||||||||||||    
T  26158891 tggtgccaatttcggtgggtaagtccatacag-------ctctggcttagaacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcg 26158983  T
Q  354 aatcttggatcggataccga 373  Q
       |||||||||||||||||    
T  26158984 gtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 53167787 - 53167737
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||||| ||| ||| |||||||||||| |||||| |||||||||||    
T  53167787 ggtgccaattttggtaggccagtccatacagagctttgccctggctttaaa 53167737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 24460065 - 24460118
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    |||||||||||||||||| |||||||| |   ||||| ||||||||||||||||    
T  24460065 caatttcggtgggcaagtacatacagagcaaagctctagctttaaatgggcccc 24460118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 10682952 - 10682884
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    |||| ||||||| |||| |||||||| | |||| |||||||||| | |||||| || ||||||||||||    
T  10682952 gttcaattctccttggtcccaatttcagcgggctagtccatacaaagctttgcgctagctttaaatggg 10682884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 36660859 - 36660899
Alignment:
Q  270 ggtgggcaagtccatacagaactttgctctggctttaaatg 310  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  36660859 ggtgggcaagtccatacaaaactttcctctgcctttaaatg 36660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 19145548 - 19145412
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggt-ccc 341  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || |||||||||||||||||| |||    
T  19145548 gttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccc 19145449  T
Q  342 tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||| |  |||||||||||||||||||||||    
T  19145448 tcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 19456335 - 19456210
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||    
T  19456335 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtc 19456237  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || ||||||||||||||||||||||||    
T  19456236 gattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 27498868 - 27498730
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  27498868 gttcgattccctctggtgccaatttcggtgggctaagtccatacatagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 27498770  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  27498769 cctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 33709642 - 33709502
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||     |||||||||||||| |||  ||||||| ||||||||||||||||    
T  33709642 tcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagaga---gctctggctttaaacgggacccccacaagtgggcggtgggattg 33709546  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  33709545 gtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 38684268 - 38684405
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || ||| |||||||||||||||||    
T  38684268 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgagcggtgggattggtccc 38684366  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||||| |||||||||||||||||| |||||    
T  38684367 ctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 8484786 - 8484660
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||| |||| |||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||    
T  8484786 ctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagt 8484688  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| ||||||||||||||||||||||||    
T  8484687 cgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 11926627 - 11926501
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 350  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||   |||| || ||||| ||||||||||||||| |||||||||    
T  11926627 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattag 11926529  T
Q  351 tcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||||||||||||    
T  11926528 tcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 15641242 - 15641105
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| |    
T  15641242 gttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 15641144  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  15641143 cctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 18207267 - 18207405
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||| ||| | |||||||||||| | |  |||| || ||||||||||||||||||||    
T  18207267 gttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcc 18207365  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  18207366 cctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 30485888 - 30486026
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg--ggccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| |  | |||| || ||||||||||||||||||||    
T  30485888 gttcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcc 30485986  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||| | ||||||||||||||||||||||||    
T  30485987 cctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 32059565 - 32059439
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||    
T  32059565 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagt 32059467  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||   |||||||||||||||||||||||    
T  32059466 cggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 35425088 - 35425211
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 354  Q
    |||||||||||||||||| ||||||||||||| ||  |||||||||||||| |||  |||| || |||||||||||||||||||| ||||||||||||||    
T  35425088 gtgccaatttcggtgggctaagtccatacagagctc-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcga 35425186  T
Q  355 atcttggatcggataccgagttttc 379  Q
     |||||||||||||||||| |||||    
T  35425187 ttcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 7085763 - 7085625
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || ||| |||||||||||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  7085763 gttcgattccctctagtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggtccccgcaagtgggcggtgggattggtcc 7085665  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  7085664 cctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 34310202 - 34310339
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |||  ||||| | |||| |||||||||||||||    
T  34310202 gttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgggacccccataagtggacggtgggattggtcc 34310300  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||| |||| |||| |||||||||||||||||||||||    
T  34310301 cctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 379
Target Start/End: Original strand, 4603833 - 4603975
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattg 336  Q
    |||||||||||||   ||||||||||||||| ||||| ||||||||||||| ||  |||||||||||||| ||| |||   || |||| |||||||||||    
T  4603833 tcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattg 4603931  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||||||   |||||||||||||||||||||||    
T  4603932 gtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 9659429 - 9659311
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccct-cggattagtcgaatct 358  Q
    |||||||||||||| ||||||||||| | ||| |||||||||||||||||||||| | |  |||| ||||||||||||||||| ||||||||| || |||    
T  9659429 caatttcggtgggctaagtccatacacagctt-gctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattct 9659331  T
Q  359 tggatcggataccgagtttt 378  Q
    ||||| ||||||||||||||    
T  9659330 tggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 10869690 - 10869564
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||| ||||||||||||||| ||||||| || || ||| |||||||||||||||||| ||  | || ||||||||||||||||||||| ||||||||||    
T  10869690 ctggttccaatttcggtgggctaagtccacactgagctt-gctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagt 10869592  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||  |||||||||||||||| |||||||    
T  10869591 cggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 379
Target Start/End: Complemental strand, 41351191 - 41351103
Alignment:
Q  293 ttgctctggctttaaatgggcc-ccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||| | || || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41351191 ttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 42193561 - 42193671
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatc 357  Q
    ||||||||||||||||| ||||| |||||||  |||||| ||||||||||||| |||| || |||||||||||| ||||||| |||||||||||||| ||    
T  42193561 tgccaatttcggtgggctaagtctatacagag-tttgctttggctttaaatggaccccgcaagtgggcggtggggttggtcctctcggattagtcgattc 42193659  T
Q  358 ttggatcggata 369  Q
    ||||||| ||||    
T  42193660 ttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 37495107 - 37495252
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac---------gtgggcggtggga 333  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |  |||| | |         |||||||||||||    
T  37495107 gttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgcccccccccccgcccgcaagtgggcggtggga 37495205  T
Q  334 ttggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  37495206 ttggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 11465032 - 11464913
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||||||||||| ||||||| |||| |||||||| |||  ||||||||||||| ||| |||| || ||||| ||||||||||||||| ||| |||||||    
T  11465032 ctggtgccaattttggtgggctaagttcatacagagctta-ctctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtc 11464934  T
Q  353 gaatcttggatcggataccga 373  Q
    || ||||||||||||||||||    
T  11464933 gattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 27487679 - 27487554
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca---cacgtgggcggtgggattggtccc-tcggattagt 351  Q
    |||||||||||||||||| | ||||||||||||| ||| ||||| |||||||| |||  ||    || ||||||||||||||||||||| ||||||||||    
T  27487679 tggtgccaatttcggtggactaagtccatacagagctt-gctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagt 27487581  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    ||| ||||||||||||||| |||||||    
T  27487580 cgattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 6014405 - 6014280
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| |||  |||| |  |||||||||| |||| ||||| ||| ||||||    
T  6014405 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagt 6014307  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    ||| |||||||||||||| ||||||||    
T  6014306 cgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 16247124 - 16247026
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcggattagtcg 353  Q
    ||||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||  ||||||| |||| ||||||||||||  |||||||||||||||    
T  16247124 ggtgccaatcttggtgggctagtccatacagaactttgctttgggtttaaatgggctccccacaagtggacggtgggattggacccctcggattagtcg 16247026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 31206307 - 31206441
Alignment:
Q  249 attctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcg 344  Q
    |||| ||||||||||||||||  ||| | ||||||||||||| || |||||| ||||||||||||  ||||||| |||| |||||||||||| | |||||    
T  31206307 attccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacggtgggattggactcctcg 31206406  T
Q  345 gattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||   |||||  ||||||||||||||||    
T  31206407 gattagtcggtccttgggccggataccgagttttc 31206441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 22693074 - 22693132
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22693074 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 36895485 - 36895622
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa--tgggccccacacgtgggcggtgggattggtc-c 340  Q
    ||||||||| | ||||| ||||||||||||| |||||||||||| | ||||||||||||||  ||  | | | || || |||||||| ||||||| || |    
T  36895485 gttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgttctc 36895584  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| ||||||||  |||||||||||||||||||||||    
T  36895585 ctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 25750734 - 25750613
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccct-cggattagtcg 353  Q
    ||||||||||||||||||||  ||||||||| ||| ||| ||||||||||  || ||| ||| || ||||| |||| ||||||||||| | |||||||||    
T  25750734 ctggtgccaatttcggtgggttaagtccatatagagctt-gctctggctt--aacgggacccccaagtggggggtgagattggtcccttcagattagtcg 25750638  T
Q  354 aatcttggatcggataccgagtttt 378  Q
    | |||||||||||||||||||||||    
T  25750637 attcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 21236499 - 21236361
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| || ||| |||||||  ||||| |||||||||||||  ||| ||||| ||||||| |||  |||| || ||||||||||||||| ||||    
T  21236499 gttcgattctctctagtgtcaatttcaatgggctaagtccatacagagtttt-ctctgactttaaacggggcccccgcaagtgggcggtgggattagtcc 21236401  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | || |||||||||| ||||| ||||||||||||||||||    
T  21236400 cctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 31288083 - 31287945
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc- 339  Q
    ||||||||| |  |||||||||||||||||||  ||||||||||| | ||| ||| || ||||||| |||  |||| || |||||||||||||||||||     
T  31288083 gttcgattccctttggtgccaatttcggtgggttaagtccatacaaagctt-gctttgactttaaacggggcccccgcaagtgggcggtgggattggtct 31287985  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||  ||||||| ||||||||||||||||    
T  31287984 cctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 38631037 - 38630978
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  38631037 gtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 379
Target Start/End: Original strand, 22392797 - 22392886
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| |||  |||| || ||||||||||| ||||||||| || |||||||||| | ||||||||||||||||||||||    
T  22392797 ttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 2499315 - 2499247
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||||||||| || |||||||| |||||||||||||| ||| | || |||||||||||||||||    
T  2499315 gttcgattctccctgttgtcaatttcgatgggcaagtccatatagagccttactctggctttaaatggg 2499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  328 gtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 23270643 - 23270522
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 355  Q
    ||||||||||||||||| ||||||||||||| ||| ||| |||||||||| ||   |||| ||  ||| |||||||||||||||| |||||||||| ||     
T  23270643 tgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgat 23270545  T
Q  356 tcttggatcggataccgagtttt 378  Q
    |||||||| ||||||| ||||||    
T  23270544 tcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 10824100 - 10824038
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggc 302  Q
    |||||||||||| || || |||||||||||| ||||||||||| |||||| ||||||||||||    
T  10824100 tcaagttcgattatctctagtgccaatttcgatgggcaagtccttacagagctttgctctggc 10824038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 12317212 - 12317154
Alignment:
Q  321 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| |||||||||| ||||||||||||||| | |||| |||||||||||||||||||    
T  12317212 gtgggtggtgggattgatccctcggattagtcaattcttagatcggataccgagttttc 12317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 5049209 - 5049333
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||| ||||||||| ||| | |||| |||||||| ||| |||||||||||||| ||| |||| ||  ||| |||||||||||||||| ||| |||||||    
T  5049209 ctggtaccaatttcgatggtctaagttcatacagagctt-gctctggctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtc 5049307  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
    || |||||||||| ||||| ||||||    
T  5049308 gattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 13659348 - 13659245
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 373  Q
    ||||||||| ||||||| ||| || ||||||| |||  |||| || |||||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  13659348 aagtccatagagaactt-gctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccga 13659250  T
Q  374 gtttt 378  Q
     ||||    
T  13659249 atttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 8821091 - 8821182
Alignment:
Q  291 ctttgctctggctttaaat-gggcccca-cacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||| |||| ||| || ||||| ||||||||||||| || || ||||||| | ||||||||| ||||||||||||||    
T  8821091 ctttgctctggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagttttc 8821182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  311 ggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcgga 367  Q
    |||||| || |||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 10076900 - 10076776
Alignment:
Q  248 gattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcg 344  Q
    ||||| ||||| ||||| ||| ||||||  ||||||||||||| || ||||||  |||||||||||  ||||||| |||| ||||||||| |  |||||     
T  10076900 gattccccctgatgccagttttggtgggataagtccatacagagctatgctctaactttaaatgggtcccccacaagtggacggtgggatcgaaccctca 10076801  T
Q  345 gattagtcgaatcttggatcggata 369  Q
    ||||| |||  ||||||||||||||    
T  10076800 gattaatcggttcttggatcggata 10076776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 378
Target Start/End: Complemental strand, 15485411 - 15485291
Alignment:
Q  262 ccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcggattagtcgaatc 357  Q
    ||||||||||||||  ||||||||||| |||| || ||||||||||||||||  |||| || ||||  |||||||||||  |||||||||||||||  ||    
T  15485411 ccaatttcggtgggttaagtccatacaaaactatgttctggctttaaatggggtccccgcaagtggatggtgggattggacccctcggattagtcggctc 15485312  T
Q  358 ttggatcggataccgagtttt 378  Q
    || | | |||||| |||||||    
T  15485311 ttaggttggatacagagtttt 15485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 25587004 - 25587056
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  25587004 ctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaa 25587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 34049905 - 34050008
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 373  Q
    ||||||||||||| ||| |||||||||||||| |||  |||| || |||| |||| ||||||||||| |||||||||| || |||   ||||||||||||    
T  34049905 aagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccga 34050003  T
Q  374 gtttt 378  Q
    |||||    
T  34050004 gtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 12398585 - 12398447
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  ||||| |||||||||||| | |||| |||||||| ||| ||||||||||||||||||  |||| ||  ||| ||||| ||||| |||    
T  12398585 gttcgattccctatggtgtcaatttcggtggcctaagttcatacagagctt-gctctggctttaaatggggcccccgcaaatggacggtgagattgatcc 12398487  T
Q  341 -ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
     |||  ||||||||  |||||||| |||||||||||||||    
T  12398486 tctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 15931119 - 15931182
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||| |  |||||||||||||||    
T  15931119 gttcgattccctctggtgccaatttcggtggctaagtccatacagagc-ctgctctggctttaaa 15931182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 26009401 - 26009263
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  ||||||||||||| |||||| |||||||| |||| |||  ||||||||||||| |||  |||| || |||||  |||||||| ||||    
T  26009401 gttcgattccctttggtgccaatttcagtgggctaagtccatgcagagctta-ctctggctttaaacggggcccccgcaagtgggtagtgggattagtcc 26009303  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||  ||||| |||| ||| |||||||||    
T  26009302 cctcggattagtcggttcttgaatcgaatatcgagttttc 26009263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 10813954 - 10813851
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgag 374  Q
    |||||||||| || ||||||||||||||||||  |||||||||| || || ||||||||| || |||| |||||||||   ||||| | || ||||||||    
T  10813954 aagtccatacggagctttgctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggattagtcagttcttgaaccgaataccgag 10813855  T
Q  375 tttt 378  Q
    ||||    
T  10813854 tttt 10813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 13038537 - 13038463
Alignment:
Q  299 tggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 370  Q
    |||||||||| |||  |||| || |||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13038537 tggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 18172861 - 18172979
Alignment:
Q  255 cctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtc-cctcggattagt 351  Q
    |||||| ||||||||||||| || |||||| || ||| |||||||| ||||||||||| ||| |  | |||| || | ||||||||| ||| ||| ||||    
T  18172861 cctggtaccaatttcggtggacaggtccattcaaaaccttgctctgactttaaatgggaccctcgtaagtggacgattggattggtctccttggagtagt 18172960  T
Q  352 cgaatcttggatcggatac 370  Q
    ||| |||||||| ||||||    
T  18172961 cgattcttggattggatac 18172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 25548588 - 25548533
Alignment:
Q  325 gcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||  |||| ||||||||| |||||||||| |||||||||||||    
T  25548588 gcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttc 25548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 370
Target Start/End: Original strand, 36954878 - 36955007
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | ||||| | |||||||| | || |||||||||||||  |||||| ||||||||||||||  |||| || |||| | |||||||| || |    
T  36954878 gttcgattccctctggttctaatttcggcgtgctaagtccatacagag-tttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcc 36954976  T
Q  340 cctcggattagtcgaatcttggatcggatac 370  Q
    ||||  ||||||||| |||||||||||||||    
T  36954977 cctcatattagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 370
Target Start/End: Complemental strand, 13108508 - 13108458
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 370  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13108508 gtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 41084122 - 41084180
Alignment:
Q  321 gtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||| |||||| ||||| |||||||||||  ||||| |||||||||||||||||    
T  41084122 gtgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 27569459 - 27569516
Alignment:
Q  292 tttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcggatta 349  Q
    |||||||||||||||||| ||||||||| |||| | |||||||||  ||||| |||||    
T  27569459 tttgctctggctttaaataggccccacaagtggtcagtgggattgaaccctcagatta 27569516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 28614539 - 28614486
Alignment:
Q  326 cggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||| |||| ||| ||||||||| | |||||||||||||||||||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 304
Target Start/End: Complemental strand, 3586340 - 3586308
Alignment:
Q  272 tgggcaagtccatacagaactttgctctggctt 304  Q
    ||||| |||||||||||||||||||||||||||    
T  3586340 tgggctagtccatacagaactttgctctggctt 3586308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 3600037 - 3599997
Alignment:
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  3600037 ccctcggattagtcgattcttggatctgataccgagatttc 3599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 7151468 - 7151500
Alignment:
Q  346 attagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||| |||||||||||||||||||||||    
T  7151468 attagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 40385 - 40522
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40385 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40483  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40484 ctcggattagtcgattcttggatcggataccgagttttc 40522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 7e-38; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 34844895 - 34844757
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  34844895 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 34844797  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34844796 cctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 40058989 - 40058851
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40058989 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40058891  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  40058890 cctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 5609339 - 5609201
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || |||| ||||||||||| |||    
T  5609339 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattgatcc 5609241  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  5609240 cctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 248 - 377
Target Start/End: Complemental strand, 25969633 - 25969504
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccctcgga 346  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||  | ||| |||||||||||||||||||| |    
T  25969633 gattccccctggtgccaatttcggtggccaagtccatacagaac-ttgctctggctttaaacgggcccccgtaagtgagcggtgggattggtccctcgaa 25969535  T
Q  347 ttagtcgaatcttggatcggataccgagttt 377  Q
    |||||||| ||||| ||||||||| ||||||    
T  25969534 ttagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 377
Target Start/End: Original strand, 52983679 - 52983815
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  52983679 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 52983777  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  52983778 cctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 27528932 - 27528794
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| | |||  |||| || |||||||||| |||||||||    
T  27528932 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttatacggggcccccgcaagtgggcggtgagattggtcc 27528834  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  27528833 cctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 32986269 - 32986395
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||  |||| || ||||||||||||||||||||| ||||| ||||    
T  32986269 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagt 32986367  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| ||||||||||||||||||||||||    
T  32986368 cgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 34723859 - 34723996
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||| ||||||||||||||    
T  34723859 gttcgattccctctggtgccaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcc 34723957  T
Q  341 -ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
     |||||||||||||| |||||||||||||||||||||||    
T  34723958 tctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 20566402 - 20566547
Alignment:
Q  236 gtgatcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg--ggccccacacgtgggcggtggg 332  Q
    ||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |  | |||| || ||||||| ||||    
T  20566402 gtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcgctggg 20566500  T
Q  333 attggt-ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||| ||||| |||||||||| |||||||||||||| ||||||||    
T  20566501 attggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 33696404 - 33696279
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || |||||||||| ||||||||| |||||||||||    
T  33696404 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagt 33696306  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    | | |||||||||||||| ||||||||    
T  33696305 caattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 20078109 - 20077986
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggt-ccctcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||| |  | ||||||||||||||| || |||||||||||||    
T  20078109 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagt 20078011  T
Q  352 cgaatcttggatcggataccgagtt 376  Q
    ||| |||||||||||||||||||||    
T  20078010 cgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 49287918 - 49288054
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggc-cccacacgtgggcggtgggattggt-cc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| || |||||| |||||||||| |||| ||| || ||||||| || ||||||| ||    
T  49287918 gttcgattctctctggtgccaatttcggtgggctaagtccataca-aaatttgctatggctttaaacgggctcccgcaagtgggcgctgagattggtccc 49288016  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| ||||||||| ||||| |||||||    
T  49288017 ctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 7392100 - 7391964
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccaca-cgtgggcggtgggattggt-ccc 341  Q
    ||||||||| |  ||||||||||||||||||  |||||||||||| | ||||||||||||||||||||| ||| ||  |||||||||||||||| | |||    
T  7392100 gttcgattccctatggtgccaatttcggtggttaagtccatacag-agtttgctctggctttaaatgggacccccatagtgggcggtgggattgttcccc 7392002  T
Q  342 tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||  |||| ||| |||||||||||||||    
T  7392001 tcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 32990510 - 32990633
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 354  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| |||||||| |||||||    
T  32990510 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcga 32990608  T
Q  355 atcttggatcggataccgagttttc 379  Q
     |||||||||| |||| ||||||||    
T  32990609 ttcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 19660665 - 19660531
Alignment:
Q  248 gattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tc 343  Q
    ||||||| ||| ||| ||||||||||||  ||||||||||||| ||| ||||||||||||||  ||  |||| || |||||||||||||||| |||| ||    
T  19660665 gattctctctgatgcaaatttcggtgggataagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctc 19660567  T
Q  344 ggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19660566 ggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 379
Target Start/End: Original strand, 44343570 - 44343712
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | ||||||| ||||| ||||||| ||||||||||||| ||| |||||| ||||||| ||| |  || || ||||||||||||||||    
T  44343570 tcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagctt-gctctgactttaaacggggctcccgcaagtgggcggtgggattg 44343668  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||| ||||||||| ||||| ||||||||||||||||||    
T  44343669 gtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 45787841 - 45787703
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||| |||||||||| |||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || |||| |||||||||||||||    
T  45787841 gttcgattccctctgatgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtggacggtgggattggtcc 45787743  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  45787742 cctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 379
Target Start/End: Original strand, 46714466 - 46714591
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    |||||||||||||||||||| ||||||||||||| ||| || || |||||||| |||  |||| || ||||||||||||||||||||| |||||||||||    
T  46714466 tggtgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtc 46714564  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
     | ||||| ||||||||||||||||||    
T  46714565 aattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 369
Target Start/End: Complemental strand, 9517778 - 9517650
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||| |||| |||||||||    
T  9517778 gttcgattctctctggtgccaatttcagtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaggtgggtggtgagattggtcc 9517680  T
Q  341 c-tcggattagtcgaatcttggatcggata 369  Q
    | ||||||||||||| ||||||||||||||    
T  9517679 cctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 55961878 - 55961753
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtc 352  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||||||||| ||| |||||||| ||    
T  55961878 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaatc 55961780  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || ||||| |||| ||||||| |||||    
T  55961779 gattcttgaatcgaataccgaattttc 55961753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 54127464 - 54127341
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||     
T  54127464 gtgccaatttcggtgggctaagtctatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgg 54127366  T
Q  355 atcttggatcggataccgagttttc 379  Q
     ||||||| ||||||| ||||||||    
T  54127365 ttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 18875653 - 18875516
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 341  Q
    ||||||||| | ||| || |||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| ||| |||||  ||||||||| ||||    
T  18875653 gttcgattccctctgatgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccacaagtgggtagtgggattgatccc 18875555  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||| | | ||||||| ||||||||||||||    
T  18875554 ctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 25852274 - 25852412
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 338  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||  ||   || | || ||||||  ||||||||||     
T  25852274 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtc 25852372  T
Q  339 ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||  ||||||| |||||||||||||||    
T  25852373 ccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 378
Target Start/End: Original strand, 35229243 - 35229365
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    ||||||||||||||||| ||||||||||| | ||| |||||| ||||||| |||   ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  35229243 tgccaatttcggtgggctaagtccatacatagctt-gctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcga 35229341  T
Q  355 atcttggatcggataccgagtttt 378  Q
     |||||||||||||||||| ||||    
T  35229342 ttcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 25445359 - 25445279
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtc 339  Q
    |||||||||||| |||||||||| |||||| |||||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  25445359 tggtgccaattttggtgggcaagcccatactgaactttgct-tggctttaaatgggtcccgca-gtgggcggtgggattggtc 25445279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 32942430 - 32942562
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| | || ||||||||||||| ||   ||||||| |||| ||||||||||||| |    
T  32942430 gttcgattctctctgatgccaatttcggtgggctaagtccatacagagc-ttactctggctttaaacggcccccccacaagtggacggtgggattggtcc 32942528  T
Q  340 cctcggattagtcgaatcttggatcggataccga 373  Q
    |||||||| | |||| |||||||| ||| |||||    
T  32942529 cctcggataaatcgattcttggattggaaaccga 32942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 378
Target Start/End: Complemental strand, 13716583 - 13716450
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa-tgggccc-cacacgtgggcggtgggattggtcc-ctcg 344  Q
    ||||| |||| ||||||||||| |||||||||||||||| |||||||||| || |||||||  |||||| | || |||||||||||||||||||| || |    
T  13716583 gattccccctagtgccaatttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattggtcctcttg 13716484  T
Q  345 gattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||   ||||| ||||||||| |||||||    
T  13716483 gattggtcagttcttgaatcggatactgagtttt 13716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 28791187 - 28791312
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtcg 353  Q
    |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||| ||| | ||||| |||||||||| |||||| ||  ||| ||||||||    
T  28791187 ctggtgtcaatttcggtgggtaagtctatacaaaactttgctctggctttaaacgggtctccacaagtgggcggtgagattggttctttcgaattagtcg 28791286  T
Q  354 aatcttggatcggataccgagttttc 379  Q
       |||| |||||||| |||||||||    
T  28791287 gtccttgaatcggatatcgagttttc 28791312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 36131647 - 36131509
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||||||| | ||||||||||||| ||| ||| || ||||||| ||| ||| |  | ||||||||||||||||||||    
T  36131647 gttcgattccctatggtgccaatttcggtggcctaagtccatacagagctt-gctatgactttaaacgggacccccgtaagtgggcggtgggattggtcc 36131549  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| | || |||| ||||||||||||||    
T  36131548 cctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 13550283 - 13550404
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||||| |||  ||||||| ||||||||| |||| |||||| |||||||| ||||    
T  13550283 gtgccaatttcggtgggctaagtccataccgagctta-ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcga 13550381  T
Q  355 atcttggatcggataccgagttt 377  Q
     ||||||||||  ||||||||||    
T  13550382 ttcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 51535673 - 51535818
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-----aagtccatacagaacttt--gctctggctttaaatggg--cccca-cacgtgggcggtggga 333  Q
    ||||||||| | ||||||||||||| |||||||     ||||||||||||| |||   |||||||||||||| |||  ||||| || |||||||||||||    
T  51535673 gttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtggga 51535772  T
Q  334 ttggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||| ||| ||||||||| |||| ||||||||||||| ||||    
T  51535773 ttggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 23639763 - 23639821
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23639763 gtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 23645421 - 23645479
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23645421 gtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 52494627 - 52494685
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  52494627 gtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 10125884 - 10125973
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattg 336  Q
    ||||| |||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||  ||||||  || |||||| |||||||||    
T  10125884 gattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccctgcaagtgggcagtgggattg 10125973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 35674878 - 35674749
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | |||||||| ||||||| |||  |||| || ||||||||| ||||          
T  35674878 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctgcctttaaacggggcccccgcaagtgggcggttggat------ 35674786  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  35674785 ctcggattagtcgattctt-gatcggataccgagtttt 35674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 316
Target Start/End: Complemental strand, 42281216 - 42281169
Alignment:
Q  269 cggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  42281216 cggtgggctagtccatacataactttgctctggctttaaatgggcccc 42281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 43719145 - 43719086
Alignment:
Q  321 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  43719145 gtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttc 43719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 1985896 - 1986031
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||| ||||||| ||||| |||||||||||||  |   ||||||||||||| ||   ||||||| ||||||||||| |||||||     
T  1985896 gttcgattccctttggtgcgaatttcgatgggctaagtccatacagag-taaactctggctttaaacggagcccccacaagtgggcggtggaattggtct 1985994  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||||||||||||| |||||||| ||||||||||||||    
T  1985995 atcggattagtcgattcttggat-ggataccgagtttt 1986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 4064991 - 4065057
Alignment:
Q  313 ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| ||| ||||    
T  4064991 ccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 9978567 - 9978509
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||    
T  9978567 gtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 12500183 - 12500059
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 352  Q
    ||||||||||||||  ||||| ||||||||||| | ||| |||||||||||||| |||  |||| || |||||||||   |||| || ||||||||||||    
T  12500183 ctggtgccaatttcaatgggctaagtccatacatagctt-gctctggctttaaacgggacccccgcaagtgggcggtaaaattgatctctcggattagtc 12500085  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
     | ||||||| |||||||||||||||    
T  12500084 aattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 379
Target Start/End: Complemental strand, 21387603 - 21387486
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 358  Q
    |||||| ||||||| ||||| ||||||| ||| |||||||||||||| |||  |||| || ||||||||||||  ||||||| ||||||||||||| | |    
T  21387603 caattttggtgggctaagtctatacagagctt-gctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattat 21387507  T
Q  359 tggatcggataccgagttttc 379  Q
    ||||||||||||| |||||||    
T  21387506 tggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 33992686 - 33992750
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| | | ||||||||||||||||    
T  33992686 gttcgattctctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaa 33992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 34835589 - 34835726
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 339  Q
    ||||||||| | |||||| |||||||||||||| |||||||||| || || || ||||||||||||| ||   |||| || ||||||| || ||||||||    
T  34835589 gttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatg-tctggctttaaatagggccccccgcaagtgggcg-tgagattggtc 34835686  T
Q  340 cc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    || ||||||||||||| |||| ||||| |||| |||||||    
T  34835687 ccctcggattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 37302619 - 37302684
Alignment:
Q  314 cccacacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||| ||||||| |||||||||||||| |||||||||||| ||||| |||||||||||| ||||    
T  37302619 cccacaagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 13584395 - 13584253
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | |||||| |||||||| ||||| ||||||||| ||| | |||||||||||||||| |||  || ||||  || ||||||| ||||    
T  13584395 tcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaattg 13584297  T
Q  337 gtc-cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||| ||||| ||||||||  ||||| |||| |||| ||||||||    
T  13584296 gtctcctcgaattagtcggttcttgaatcgaatactgagttttc 13584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 23131499 - 23131435
Alignment:
Q  316 cacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| ||||||||| ||||||||||| ||| ||||||||| |||| |||||||||||||||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 379
Target Start/End: Original strand, 27574427 - 27574516
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| |||  |||| || |||||||||| | |||||||| |||||||| || | ||||||||||||||| ||||||||    
T  27574427 ttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttc 27574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 30879290 - 30879165
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattgg-tccctcggattagtc 352  Q
    ||||||||||||||| ||||  || |||||||| || |||||||||||||||||  ||| ||  || |||| |||||||||||| |||||| ||||| ||    
T  30879290 ctggtgccaatttcgatgggttaaatccataca-aagtttgctctggctttaaagggggtcctgcaagtggacggtgggattggttccctcagattaatc 30879192  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || ||||||||| |||||||| |||||    
T  30879191 gattcttggatcagataccgaattttc 30879165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 55158413 - 55158343
Alignment:
Q  309 tgggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||| ||  |||| ||||||||||||||| ||||||||||||| | |||||||||| ||||||||||    
T  55158413 tgggccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 377
Target Start/End: Original strand, 24273282 - 24273418
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc 341  Q
    |||||||| || ||||||| || |||||||||||| |||||||| ||||||||| | | |||||||||| | | | |  ||||| ||| |||||| ||||    
T  24273282 gttcgattttctctggtgctaagttcggtgggcaaatccatacaaaactttgctatagttttaaatggggctctcgcaagtgggtggtaggattgatccc 24273381  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttt 377  Q
     || |||||||||   |||||||| ||||||||||||    
T  24273382 atcagattagtcggtccttggatcagataccgagttt 24273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 377
Target Start/End: Complemental strand, 20527174 - 20527035
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattgg 337  Q
    ||||||| ||||| | |||| |||||||||||||||| ||||||||| ||| ||| | | | | ||||||  |||||||  | ||||||||| |||||||    
T  20527174 tcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagctt-gatttcggtttaaacagggccccgtaagtgggcggtaggattgg 20527076  T
Q  338 tc-cctcggattagtcgaatcttggatcggataccgagttt 377  Q
    || ||||||||||||||| | |||||||  |||||||||||    
T  20527075 tctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 22630323 - 22630263
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| |  |||||| ||||||    
T  22630323 gttcgattccctctggtgccaattttggtgggcaagtccatacaaagttttgctttggctt 22630263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 37455637 - 37455704
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||| ||||||||||||||||  ||||| | |||||| |||  |||||||||||||||||||||    
T  37455637 gttcgattc-ccctggtgccaatttcaatgggctaatccatatagagatttgctctggctttaaatggg 37455704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 41085086 - 41085222
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc-ccacacgtgggcggtgggattggtcc-c 341  Q
    ||||||||||| ||| |||| |||||| ||| |||||||||| ||| ||||||||| ||||||| || ||| |  |  |||| ||||||||||||||| |    
T  41085086 gttcgattctctctgatgccgatttcgatggacaagtccatatagagctttgctctagctttaagtgagccactgctagtggacggtgggattggtcctc 41085185  T
Q  342 tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||| |||||| || ||||| || || ||| |||||||    
T  41085186 tcgaattagtggattcttgtataggctactgagtttt 41085222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 33289212 - 33289251
Alignment:
Q  339 ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  33289212 ccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 51595094 - 51595219
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagt 351  Q
    ||||||||||||||| ||| | || || ||| ||||||| |||||| ||||||| |||  |||| || |||| |||||| |||| || || ||||||| |    
T  51595094 ctggtgccaatttcgatggactaaatcaatagagaactt-gctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaat 51595192  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    ||| |||||||||||||||||||||||    
T  51595193 cgattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 7093510 - 7093568
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||| ||| ||||||||   ||||||||||||| ||||||||    
T  7093510 gtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 12824539 - 12824597
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||| | ||| ||||||||| ||||||||||||||| |||||||    
T  12824539 gtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 17637909 - 17637852
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||  ||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  17637909 gtgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 12710258 - 12710299
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  12710258 caatttcggtggacaagtccatacagtgctttgctctggctt 12710299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 39288938 - 39288978
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  39288938 caatttcggtgggcaagtccatacagagc-ttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 41621721 - 41621680
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgct 297  Q
    ||||||||||||| ||||||||| |||||||||| |||||||    
T  41621721 ctggtgccaattttggtgggcaaatccatacagagctttgct 41621680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 6427102 - 6427185
Alignment:
Q  297 tctggctttaaat-gggccccacacgtgggcggtgggattg-gtccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||| |||||||||| |||| | |||||||||  ||||||||||||||||   |||||  ||||||||||||||||    
T  6427102 tctggctttaaatggggccccacaagtggacagtgggattgaatccctcggattagtcggtccttgg-ccggataccgagttttc 6427185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 8442101 - 8442049
Alignment:
Q  328 gtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||| |||||    
T  8442101 gtgggattggtctcctcggattagtcgattcctagatcggataccgaattttc 8442049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 378
Target Start/End: Complemental strand, 24672337 - 24672305
Alignment:
Q  346 attagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||| |||||||||||||||||||||||    
T  24672337 attagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 4718709 - 4718847
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  4718709 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 4718807  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  4718808 cctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 34237792 - 34237654
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||| ||||||||||||||||    
T  34237792 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcc 34237694  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34237693 cctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 6953144 - 6953008
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || || |||||||||||||||||    
T  6953144 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagttggcggtgggattggtcc 6953046  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6953045 ctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 244 - 377
Target Start/End: Original strand, 28193538 - 28193674
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| ||| |||  ||| ||||||||||||||||||||    
T  28193538 gttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctacaagtgggcggtgggattggtcc 28193636  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  28193637 cctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 18128578 - 18128714
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-c 341  Q
    |||||||||| ||||||||||||||||||||| | |||||| ||| |||||||||||||||||| |||  |||| || |||||||||||||||||||| |    
T  18128578 ttcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctc 18128677  T
Q  342 tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    || |||||||||  |||||||||| ||||||||||||    
T  18128678 tcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 3734760 - 3734622
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  ||||| |||||||||||||    
T  3734760 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcc 3734662  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  3734661 cctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 8765663 - 8765525
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  8765663 gttcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 8765565  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  8765564 cctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 39349320 - 39349458
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  39349320 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 39349418  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||||||||||| |||||||    
T  39349419 cctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 21603294 - 21603431
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||||||||| ||| ||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21603294 gttcgattccctatggtgccaatttcggtgggctaagcccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21603392  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  21603393 cctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 2618250 - 2618388
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||   |||| || ||||||||||||||||||||    
T  2618250 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggtcc 2618348  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||| ||||||||||    
T  2618349 cctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 32879343 - 32879481
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| |||| |||||||| ||| |||||| | ||||| |||  ||||||| ||||||||||||||||||||    
T  32879343 gttcgattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctgacattaaacggggcccccacaagtgggcggtgggattggtcc 32879441  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||| |||||||||||||||    
T  32879442 cctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 20305984 - 20306110
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||| ||||||    
T  20305984 ctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagt 20306082  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    |||  |||||||||||||||||||||||    
T  20306083 cgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 21092617 - 21092743
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||| ||||||    
T  21092617 ctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagt 21092715  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    |||  |||||||||||||||||||||||    
T  21092716 cgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 42328084 - 42328206
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 355  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| |||| || ||||||||||||| ||| |||||||||     
T  42328084 tgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgat 42328182  T
Q  356 tcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||||||||    
T  42328183 tcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 244 - 377
Target Start/End: Complemental strand, 15259543 - 15259407
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||  ||||||||    
T  15259543 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcc 15259445  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    | ||| ||||||||| ||||||||||||| ||||||||    
T  15259444 cctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 21239409 - 21239503
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggat 334  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  21239409 tcaagtttgattttccctggtgccaatttcggtgggcatgtccatataaaactttgctttggctttaaatgggccccacaagtggacggtaggat 21239503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 14633018 - 14633156
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||| || ||  |  ||||| ||||||||||||||||||||    
T  14633018 gttcgattccctctggtgccaatttcggtgggctaagtctatacagagctt-gctctggctttgaacggagcgtccacaagtgggcggtgggattggtcc 14633116  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | | ||||||||||| |||||||||||||||| |||||||    
T  14633117 ccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 2639500 - 2639410
Alignment:
Q  292 tttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 378
Target Start/End: Complemental strand, 42643254 - 42643118
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 341  Q
    |||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||| ||| ||| |||  |||| || |||||||||||||||||||||    
T  42643254 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtccc 42643156  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||| |||||| || |||||||||||||||||||||||    
T  42643155 ctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 4698860 - 4698722
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||||||||| ||||||||  ||||||| |||||||||||||| ||   |||| || ||| ||||||||||||||||    
T  4698860 gttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaactt-gctctggctttaaacggagcccccgcaagtgagcggtgggattggtcc 4698762  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| || ||||| |||||||||||||||    
T  4698761 cctcggattagtcgattcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 3403627 - 3403502
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggt-ccctcggattagtc 352  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| |  | |||||||||| | ||||| |||||| |||||||    
T  3403627 ctggtgccaatttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtgaggttggtcccctcgaattagtc 3403528  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
     | |||| || | |||||||||||||    
T  3403527 aattcttagaccagataccgagtttt 3403502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 19471685 - 19471812
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 350  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19471685 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19471783  T
Q  351 tcgaatcttggatcggataccgagttttc 379  Q
    ||||  |||||||||||||||||||||||    
T  19471784 tcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 19542609 - 19542736
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 350  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19542609 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19542707  T
Q  351 tcgaatcttggatcggataccgagttttc 379  Q
    ||||  |||||||||||||||||||||||    
T  19542708 tcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 19590087 - 19589960
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 350  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19590087 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19589989  T
Q  351 tcgaatcttggatcggataccgagttttc 379  Q
    ||||  |||||||||||||||||||||||    
T  19589988 tcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 20469981 - 20470117
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || | |||||||| | ||||| ||||||||||||| ||| ||||||||||||||  |   |||| || |||||||||||||||||| |    
T  20469981 gttcgattccctctagagccaatttagatgggctaagtccatacagagctt-gctctggctttaaacagagcccccgcaagtgggcggtgggattggttc 20470079  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| | |||||||||||||||||||||    
T  20470080 ctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 264536 - 264400
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 341  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  264536 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 264438  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  264437 ctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 651385 - 651521
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 341  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  651385 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 651483  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  651484 ctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 837120 - 837256
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 341  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  837120 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 837218  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  837219 ctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 10292167 - 10292255
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||    
T  10292167 ttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 25248413 - 25248547
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| | |||||| |||||||||| ||| ||||| |||||||  ||||||||||||||||| |||||| | || |||||||||||||||||| ||    
T  25248413 gttcgattccctctggtgtcaatttcggtaggctaagtc-atacagag-tttgctctggctttaaacgggccctcgcaagtgggcggtgggattggtccc 25248510  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||| || || ||||||||||||||||||    
T  25248511 ctcggattagtcg-atttttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 12312906 - 12313046
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt 338  Q
    ||||||||||||  | ||||||||||||| | |||||||| ||| ||| | ||||| | |||||||||||||| ||||||| |||||||||||||||| |    
T  12312906 tcaagttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggctttaaatgggcccccacaagtgggcggtgggattgat 12313005  T
Q  339 -ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
     |||||| ||||||||  |||| || |||| ||||||||||    
T  12313006 cccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 34610824 - 34610686
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | ||| ||||||||||||||| | ||||| ||||||| ||| |||||||||||||| | ||||| | |  ||||||||| | ||||||||    
T  34610824 gttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt-gctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcc 34610726  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  34610725 cctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 27746472 - 27746334
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtggg-cggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||||||| ||||| || ||| ||| ||||    
T  27746472 gttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaaggggccccacaagtggggcgatggaattagtcc 27746374  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||||| ||| ||| |||||    
T  27746373 cctcggattagtcgattcttggatcgaatatcgatttttc 27746334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 378
Target Start/End: Original strand, 2166770 - 2166897
Alignment:
Q  253 tccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggatta 349  Q
    ||||| ||||||||||| || ||| ||||||||||||| ||| |||||||||||||||  | |||| || |||||||||||||||||| ||||| |||||    
T  2166770 tccctcgtgccaatttcagtaggctaagtccatacagagctt-gctctggctttaaataagaccccgcaagtgggcggtgggattggtcccctcagatta 2166868  T
Q  350 gtcgaatcttggatcggataccgagtttt 378  Q
    ||||| | || ||| ||||||||||||||    
T  2166869 gtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Original strand, 20505629 - 20505715
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattggtccc 341  Q
    |||||||||||||| | ||||||||||||||| | ||||| | ||||||||||| |||| || || |||||||||||||||||||||    
T  20505629 ctggtgccaatttcagcgggcaagtccatacaaagctttgttttggctttaaatagggcaccgcaagtgggcggtgggattggtccc 20505715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 36848874 - 36848757
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg-ggccccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    ||||||||||||||||||||| |||||||||| | | ||||||| ||||||||||| ||| ||||| ||||||||||||||| || |||||  |||||||    
T  36848874 ctggtgccaatttcggtgggctaagtccatac-ggagtttgctcgggctttaaatgaggcaccacaagtgggcggtgggattagtcccctcaaattagtc 36848776  T
Q  353 gaatcttggatcggatacc 371  Q
    |  | ||||||||||||||    
T  36848775 ggtttttggatcggatacc 36848757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 1219432 - 1219551
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagtcgaatct 358  Q
    ||||||| |||||| |||||||||||||| |||| |||||||||||| |||  ||||| | ||||||||| |||| ||||||| |||||||||||| |||    
T  1219432 caatttcagtgggctaagtccatacagaa-tttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattct 1219530  T
Q  359 tggatcggataccgagttttc 379  Q
    | ||||| ||||||| |||||    
T  1219531 tagatcgaataccgaattttc 1219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 26168974 - 26168856
Alignment:
Q  255 cctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggt-ccctcggattagt 351  Q
    |||| ||||||||||||||||||||| |||||||| | ||| |||||||||||||| ||||  | || ||||| | || ||||||| |||||||| ||||    
T  26168974 cctgatgccaatttcggtgggcaagttcatacagagc-ttgttctggctttaaatgagcccctcgcaagtgggggatgagattggtcccctcggagtagt 26168876  T
Q  352 cgaatcttggatcggatacc 371  Q
    ||| |||||||||| |||||    
T  26168875 cgattcttggatcgaatacc 26168856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 28964109 - 28964234
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagt 351  Q
    ||||||||||||||||||||| |||||||||| || || || |||||||||||| |||  |||| || |||||| ||||||||||| |||||| ||||||    
T  28964109 ctggtgccaatttcggtgggctaagtccatacggagctatg-tctggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagt 28964206  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| |||| ||||| |||| ||||||||    
T  28964207 cgattcttagatcgaatactgagttttc 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 34639332 - 34639284
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  34639332 ctggtgccaatttcggtgggtaagtccatacagagctttgctctggctt 34639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 24018465 - 24018585
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatc 357  Q
    ||||||| |||||| ||||||||||||| ||| |||||||||||||| |||   ||||||| |||||||||| ||||||| |||| | ||||||||  ||    
T  24018465 caatttcagtgggctaagtccatacagagctt-gctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttc 24018563  T
Q  358 ttggatcggataccgagttttc 379  Q
    ||||| |||||| |||||||||    
T  24018564 ttggaccggatatcgagttttc 24018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 28088363 - 28088478
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    ||||| |||||||||||||  ||||||||||||| ||| |||||| ||||||||||| ||  | || |||||||||||||||| |||| || || |||||    
T  28088363 tggtgtcaatttcggtgggttaagtccatacagagctt-gctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtc 28088461  T
Q  353 gaatcttggatcggata 369  Q
    || ||||||||||||||    
T  28088462 gattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 18532190 - 18532300
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccctcggattagtcgaatctt 359  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||| ||| |||   || |||||||||| ||||||        ||||||||| ||||    
T  18532190 caatttcggtgggctaagtccatacagaactt-gctctggatttaaacggggcccctgcaagtgggcggtgagattgg--------attagtcgattctt 18532280  T
Q  360 ggatcggataccgagttttc 379  Q
    ||||||||||||||||||||    
T  18532281 ggatcggataccgagttttc 18532300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  333 attggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 325
Target Start/End: Original strand, 30482605 - 30482683
Alignment:
Q  247 cgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtggg 325  Q
    |||||||| ||| || ||| || |||||| || |||||||||||||| |||||| ||||||| |||||||||| |||||    
T  30482605 cgattctctctgatgtcaaatttggtgggtaaatccatacagaacttggctctgtctttaaacgggccccacaagtggg 30482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 8387585 - 8387536
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacaga 289  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  8387585 tcaagttcgatttcctctggtgccaattttggtgggcaagtccatacaga 8387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 379
Target Start/End: Original strand, 8042724 - 8042844
Alignment:
Q  257 tggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcggattagtcgaa 355  Q
    |||||||||||| ||||||| | |||||||||||  ||||||  |||||| ||||| |||| ||  ||  ||||||||||||||||| | |||| |||      
T  8042724 tggtgccaattttggtgggctatgtccatacagag-tttgct--ggcttttaatggtccccgcaaatgaacggtgggattggtcccttgaattaatcggt 8042820  T
Q  356 tcttggatcggataccgagttttc 379  Q
    ||||||||||||||| ||||||||    
T  8042821 tcttggatcggatactgagttttc 8042844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 352
Target Start/End: Original strand, 13749133 - 13749231
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    ||||||||||| ||||||||||| |||||| | ||||||||||||||  || |||   |||| || |||||| |||| |||||| ||||||||||||||    
T  13749133 ggtgccaattttggtgggcaagttcatacaaagctttgctctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtc 13749231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 28908899 - 28908951
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 308  Q
    |||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  28908899 ctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaa 28908951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 304
Target Start/End: Original strand, 41070821 - 41070885
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    ||||||||||||| |  ||||| |||||||||||||||||| |||||| | |||| |||||||||    
T  41070821 tcaagttcgattccctttggtgtcaatttcggtgggcaagttcatacatagctttactctggctt 41070885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 33747025 - 33747084
Alignment:
Q  321 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| |||||| |||||| | ||||||||||||||  |||||||||||||||||||||||    
T  33747025 gtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 7558034 - 7557952
Alignment:
Q  297 tctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    |||||||||||| || ||||  || |||| |||||||||||||||| ||| ||||||||| | ||| ||||||||||||||||    
T  7558034 tctggctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 34694701 - 34694574
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg---gccccacacgtgggcggtgggattggt-ccctcggattagt 351  Q
    ||||||||||||||||||||||| | |||||| | |||||||| |||||  || ||    |||| |  |||| ||||||||||||| ||||| |||||||    
T  34694701 ctggtgccaatttcggtgggcaaattcatacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattggtcccctcagattagt 34694602  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    |    ||||||||||||| |||||||||    
T  34694601 ctgtccttggatcggataacgagttttc 34694574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 34778798 - 34778847
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacaga 289  Q
    ||||||| |||| |||  ||||||||||||||||||| ||||||||||||    
T  34778798 tcaagtttgattttccacggtgccaatttcggtgggctagtccatacaga 34778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 38964141 - 38964190
Alignment:
Q  260 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 309  Q
    |||||||||  |||||| ||| |||||||||||||||||| |||||||||    
T  38964141 tgccaatttttgtgggctagttcatacagaactttgctctagctttaaat 38964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 10544956 - 10544924
Alignment:
Q  347 ttagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||| ||||||||||||||||||||||||    
T  10544956 ttagtcgattcttggatcggataccgagttttc 10544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 13580040 - 13579980
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    ||||||||||| ||||||||||||| | || |||||| ||||| || ||||||||| ||||    
T  13580040 gttcgattctctctggtgccaattttgttgagcaagttcataccgagctttgctctagctt 13579980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 33534618 - 33534566
Alignment:
Q  328 gtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  33534618 gtgggattggtcccttcggattagtcggtccttggatcggttaccgagttttc 33534566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 22119952 - 22120090
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  22119952 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 22120050  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  22120051 cctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 40543047 - 40542909
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40543047 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40542949  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  40542948 cctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 654841 - 654704
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || |||||||||||||||||||||    
T  654841 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtccc 654743  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||||  ||||||||||||||||||||||||    
T  654742 ctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 2751335 - 2751473
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  2751335 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 2751433  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  2751434 cctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 21835215 - 21835353
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21835215 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21835313  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||||||||||||| |||||||||    
T  21835314 cctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 2103119 - 2103255
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || ||||||||||||||||||||    
T  2103119 gttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgggattggtcc 2103217  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||| || | |||||||||||||||||||    
T  2103218 ctcggattagtcgattcat-gatcggataccgagttttc 2103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 7275341 - 7275478
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || ||||||||||||||||||||    
T  7275341 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 7275439  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  7275440 cctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 240 - 378
Target Start/End: Complemental strand, 17197091 - 17196950
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | |||||||||||||||||| || ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||    
T  17197091 tcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 17196993  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  17196992 gtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 7175999 - 7175861
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || ||||||||||||||||||||    
T  7175999 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacaggacccccgcaagtgggcggtgggattggtcc 7175901  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||| ||||||||    
T  7175900 cctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 29861734 - 29861872
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  29861734 gttcgattccctctggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 29861832  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| |||| |||||||||||||||||||    
T  29861833 cctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 41907650 - 41907514
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa--tgggccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||  || ||||||||||||||  ||| |||| || ||||| ||||||||||||||    
T  41907650 gttcgattctctctggtgccaatttcagtgggctaagtccatacagaggtt-gctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcc 41907552  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | | |||||||||| |||||||||||||||||||||||    
T  41907551 cccagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 21217970 - 21217832
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | ||| ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||| |||  |||||||||||||||| |||    
T  21217970 gttcgattccctctgatgccaatttcggtgggctaagtccatacagagctt-gctctagctttaaacgggccccccacaagtgggcggtgggattgatcc 21217872  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | |||||||||| || ||||||||||||||||||||||||    
T  21217871 cctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 11997913 - 11998051
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggcccca-cacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||| ||||||||  || ||||||||||||||||||||    
T  11997913 gttcgattccctctggtgccaatttcggttggctaagtccatacatagctt-gctctggctttaaactgggcccccgcaagtgggcggtgggattggtcc 11998011  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  11998012 cctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 245 - 379
Target Start/End: Original strand, 16374059 - 16374196
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 341  Q
    |||||||| | ||||||||||||||||||||  |||||||||||||| |||||| |||||||||| |||  |||| ||  ||| ||||||||||||||||    
T  16374059 ttcgattccctctggtgccaatttcggtgggttaagtccatacagaa-tttgctatggctttaaacgggacccccgcaaatggacggtgggattggtccc 16374157  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  16374158 ctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 18044171 - 18044308
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| ||||| ||||| ||||||||    
T  18044171 gttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggtggtggaattggtcc 18044269  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | || |||||||||| |||||||||||||||||||||||    
T  18044270 cctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 23012630 - 23012507
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 354  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||| |||||||||||||||||| |||||| ||||||| |    
T  23012630 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaa 23012532  T
Q  355 atcttggatcggataccgagttttc 379  Q
     || | |||||||||||||||||||    
T  23012531 ttcattgatcggataccgagttttc 23012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 10091252 - 10091389
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||||||||||||||| | |    
T  10091252 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcc 10091350  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| |||| |||| ||||||||||||||    
T  10091351 cctcggattagtcgattctt-gatccgataccgagttttc 10091389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 22703550 - 22703688
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  22703550 gttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc 22703648  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||| ||||||||||| |||||||    
T  22703649 cctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 23092172 - 23092298
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  ||| |||||||||||||||| ||||||||||    
T  23092172 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagt 23092270  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| || |||||||||||||||||||||    
T  23092271 cgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 28647033 - 28647170
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tcc 340  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||  |||||||||||||  || |||  ||||||| ||||||||||||||||| |||    
T  28647033 gttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggttcc 28647132  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||    ||||||||||||| ||||||||    
T  28647133 ctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 358  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||||| |||  |||| || |||||||||||||||| |||| ||||||||||||| |||    
T  3851840 caatttcggtgggctaagtccatatagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattct 3851938  T
Q  359 tggatcggataccgagtttt 378  Q
    ||||||||||||||||||||    
T  3851939 tggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 28089892 - 28090021
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacaga---actttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggatta 349  Q
    |||||| |||||||||||||| ||||||||||| |   |  ||||||||||||||||||||||||  || ||||||| || |||||||||| ||||||||    
T  28089892 ctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggatta 28089991  T
Q  350 gtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||||||||||||||||||    
T  28089992 gtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 377
Target Start/End: Original strand, 19421307 - 19421431
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtc-cctcggattagt 351  Q
    |||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||||||||| |  ||||| ||||||||||||||||||| ||||||||||||    
T  19421307 ctggtgtcaatttcgatgggctaagtccatacagagctt-gctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagt 19421405  T
Q  352 cgaatcttggatcggataccgagttt 377  Q
    ||| ||||| ||| ||||||||||||    
T  19421406 cgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 379
Target Start/End: Complemental strand, 21574226 - 21574101
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcg 353  Q
    ||||||||| ||||||||||||||||||||||| |||||| | |||||  || |||  ||||||| || ||||||| ||||||| |||||||||||||||    
T  21574226 tggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcg 21574127  T
Q  354 aatcttggatcggataccgagttttc 379  Q
       |||||||||||||||||||||||    
T  21574126 gtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 258 - 379
Target Start/End: Complemental strand, 23330862 - 23330738
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 354  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||  | || || |||||||||  ||||||| |||||  ||||||| |    
T  23330862 ggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaa 23330763  T
Q  355 atcttggatcggataccgagttttc 379  Q
      |||||||||||||||||||||||    
T  23330762 tccttggatcggataccgagttttc 23330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 373
Target Start/End: Complemental strand, 1766284 - 1766149
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt 338  Q
    ||||||||||||| |  | ||| ||||||||||||| ||||||||||||||||||||  ||||||  ||  |||||||||| ||||||||| ||||||||    
T  1766284 tcaagttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggccccacaagtgggcggttggattggt 1766185  T
Q  339 -ccctcggattagtcgaatcttggatcggataccga 373  Q
     |||||||||||||||   |||| ||||||||||||    
T  1766184 cccctcggattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 379
Target Start/End: Complemental strand, 42913637 - 42913512
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    |||||||||||||| ||||  |||||||||| |||||| |||||||||||||| |||  |||| || |||| |||||||||||||||| ||||||||||     
T  42913637 tggtgccaatttcgatgggataagtccatacggaactt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtt 42913539  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || |||| |||||||||||||||||||    
T  42913538 gattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 379
Target Start/End: Original strand, 31273974 - 31274115
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc-ccacacgtgggcggtgggattgg 337  Q
    ||||||||||||| | |||| || |||||||| |||| ||||||||||||| ||| |||||||||||||| ||| | || || |||||| ||| ||||||    
T  31273974 tcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagctt-gctctggctttaaacggggctccgcaagtgggcagtgagattgg 31274072  T
Q  338 tccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||||    
T  31274073 tcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 2344375 - 2344501
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||| ||||||| ||||||||||||| ||||  | |||||||||| |||  |||| || ||| ||||||||||||||||| ||||||||||    
T  2344375 ctggtgccaattttggtgggctaagtccatacagagctttttt-tggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagt 2344473  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||   |||||||||||||||||||||||    
T  2344474 cggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 378
Target Start/End: Original strand, 7262277 - 7262416
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt 338  Q
    ||||||| |||||||| || ||||||||||| ||| ||| |||||| ||| |||| ||||||||||||||||| ||||||| || |  ||||||||||||    
T  7262277 tcaagtttgattctccatgatgccaatttcgatggacaaatccatatagagctttactctggctttaaatgggtccccacaagt-gatggtgggattggt 7262375  T
Q  339 -ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
     |||||| ||||||||   |||| |||||||||||||||||    
T  7262376 cccctcgaattagtcggcccttgaatcggataccgagtttt 7262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 31712960 - 31712902
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31712960 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 371
Target Start/End: Original strand, 17212117 - 17212247
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 340  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||  || |||||||||| ||| ||| |||   || ||| | ||||||||||||||    
T  17212117 gttcaattctctctggtgccaatttcggtgggctaagtccatacagagatt-gctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcc 17212215  T
Q  341 c-tcggattagtcgaatcttggatcggatacc 371  Q
    | ||||||||||||| ||||||||| ||||||    
T  17212216 cctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 27312216 - 27312354
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || |||||||||||| || || ||||||||||||| ||   ||||| ||||||| ||   |||| || ||||||||||||||||||||    
T  27312216 gttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctac-ctctgactttaaacggagcccccgcaagtgggcggtgggattggtcc 27312314  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | || |||||||||| ||||||||||||||||||||||||    
T  27312315 cctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 32849704 - 32849791
Alignment:
Q  293 ttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    |||||||||||||||||||| |  ||| | |||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  32849704 ttgctctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 9683905 - 9684026
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||||| |||  ||||||| ||||||||| |||| |||||| |||||||| ||||    
T  9683905 gtgccaatttcggtgggctaagtccataccgagctta-ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcga 9684003  T
Q  355 atcttggatcggataccgagttt 377  Q
     ||||||||||  ||||||||||    
T  9684004 ttcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 36772424 - 36772303
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacg--tgggcggtgggattggtcc-ctcggattagtcgaa 355  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||||||| ||| ||| |  |  |||||||||| ||| |||| ||||||||||||||     
T  36772424 tgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgat 36772326  T
Q  356 tcttggatcggataccgagtttt 378  Q
    |||| ||||||||||||||||||    
T  36772325 tctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 379
Target Start/End: Original strand, 31197688 - 31197792
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 373  Q
    ||||||||||||| ||| ||||| |||||||| |||  |||| || |||| |||||||||||||||| || |||||||||| |||||||||||||| |||    
T  31197688 aagtccatacagatctt-gctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcga 31197786  T
Q  374 gttttc 379  Q
    ||||||    
T  31197787 gttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 39145789 - 39145652
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccat-acagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggt-c 339  Q
    ||||||||| |  |||||||||||||||||||| ||||| || ||||| | |||||||||||||||| |||||||  || |||| ||||||||||||| |    
T  39145789 gttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagc-ttgctctggctttaaacgggcccctgcaagtggacggtgggattggtcc 39145691  T
Q  340 cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||| ||||||||| ||||| ||| |||||| ||||||    
T  39145690 cctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 27009435 - 27009561
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac---gtgggcggtgggattggtccc-tcggattag 350  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| |||   |   |||| |||||||||||||||| ||  |||||    
T  27009435 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattag 27009533  T
Q  351 tcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||| ||||||||||||||    
T  27009534 tcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 377
Target Start/End: Original strand, 22638401 - 22638488
Alignment:
Q  293 ttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttt 377  Q
    |||||||||||||||| ||| ||  | || |||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||    
T  22638401 ttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 378
Target Start/End: Original strand, 27704079 - 27704202
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcg 353  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||| ||||||||||||| ||||  || ||||| |||| ||||| |||| || |||||||||    
T  27704079 tggtgccaatttcggtgggctaagtccatagagagctt-gctttggctttaaatggacccccgcaagtgggtggtgtgattgatcccctcagattagtcg 27704177  T
Q  354 aatcttggatcggataccgagtttt 378  Q
    | ||||| ||| |||||||||||||    
T  27704178 attcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 8435820 - 8435741
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggatt 335  Q
    |||||||||||||||||||||||||||||||| | ||||| | |||||||||  || |||| || |||||| ||||||||    
T  8435820 ctggtgccaatttcggtgggcaagtccatacaaagctttgttttggctttaatgggcccccgcaagtgggcagtgggatt 8435741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 28950947 - 28951072
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||||||||||||||||||| |||| |||| ||| ||| |||||||||||||| ||| ||| | |  || |||||||||||||||||| ||| | |||     
T  28950947 ctggtgccaatttcggtgggctaagttcatatagagctt-gctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactaga 28951045  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    | | |||||||||||||||||||||||    
T  28951046 caattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 23636687 - 23636590
Alignment:
Q  259 gtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcggattagtcg 353  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||  || |||| || | |||||||||||| |  |||||||||||||    
T  23636687 gtgccaatttcggtgggttagtccatatagagctttgctctggctttaaatggggccctcacaagtagacggtgggattggacttctcggattagtcg 23636590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 22696396 - 22696522
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccca---cacgtgggcggtgggattggtcc-ctcggattag 350  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||||  || | ||||||    || || ||||| ||||||||||| ||||||||||    
T  22696396 ctggtgccaatttcggtggggac-tccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggtcctctcggattag 22696494  T
Q  351 tcgaatcttggatcggataccgagtttt 378  Q
    |||   ||||||||||||||||||||||    
T  22696495 tcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 9718128 - 9717986
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | |||||| |||||||| ||||| ||||||||| ||| | |||||||||||||||| |||  || ||||  || ||||||| ||||    
T  9718128 tcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaattg 9718030  T
Q  337 gtc-cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||| ||||| ||||||||  ||||| |||| |||| ||||||||    
T  9718029 gtctcctcgaattagtcggttcttgaatcgaatactgagttttc 9717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 35476405 - 35476465
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 304  Q
    |||||||||||  |||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  35476405 gttcgattctctttggtgccaattttggtgggtaagttcatacagagctttgctctggctt 35476465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 25333546 - 25333603
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  25333546 gtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 379
Target Start/End: Complemental strand, 13332557 - 13332433
Alignment:
Q  247 cgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcgg 345  Q
    |||||| | |||| |||||||||||||||| ||||||||||||| |||  |||||||||||||  |||||| || |||| ||||         | |||||    
T  13332557 cgattccctctggagccaatttcggtgggctaagtccatacagagctta-ctctggctttaaacaggccccgcaagtggccggtc--------cactcgg 13332467  T
Q  346 attagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||| ||||||||| ||||||||||||||    
T  13332466 attagtcgattcttggatcagataccgagttttc 13332433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 354
Target Start/End: Original strand, 21373789 - 21373887
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 354  Q
    |||||||||||||||||| ||||| ||||||| | |||||||||||||||| |||  |||| || |||| ||||| ||||||||| | ||||||||||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcga 21373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 28136288 - 28136252
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc 276  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28136288 tcaagttagattctccctggtgccaatttcggtgggc 28136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 36173099 - 36173171
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    ||||||||| | || |||||||||| |||||||||||||||||||| ||  ||||| | || |||||||||||    
T  36173099 gttcgattccctcttgtgccaattttggtgggcaagtccatacagagctaagctcttgtttaaaatgggcccc 36173171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 43785440 - 43785298
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattg 336  Q
    ||||||||||||| | || |||| |||||| |||| | ||||||||||||| |||  |||||| |||||| ||| ||  | || |||| ||||| |||||    
T  43785440 tcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagctta-ctctggttttaaacggggcctccgcaagtggacggtgagattg 43785342  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| | ||||||||||| | ||||||||||||||||| ||||    
T  43785341 gtccccttggattagtcgatttttggatcggataccgagctttc 43785298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 47380962 - 47381005
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccataca 287  Q
    ||||||||||| || ||||||||||||||| |||||||||||||    
T  47380962 gttcgattctcacttgtgccaatttcggtgtgcaagtccataca 47381005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 378
Target Start/End: Original strand, 48199383 - 48199470
Alignment:
Q  292 tttgctctggctttaaatgggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||| ||||||||||| |||||| ||||| ||||| ||||| || ||| |||||||||| ||||  ||||||||  |||||||    
T  48199383 tttgctctgactttaaatgggtcccacaagtgggtggtggaattggacctctcagattagtcgattcttaaatcggataatgagtttt 48199470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 1469192 - 1469242
Alignment:
Q  260 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 310  Q
    ||||||||||| |||||||||||||||| | |||| || ||||||||||||    
T  1469192 tgccaatttcgatgggcaagtccatacaaagctttactttggctttaaatg 1469242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 379
Target Start/End: Original strand, 22299966 - 22300004
Alignment:
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  22299966 ctcggattagtcgattcttgaatcggataccgagttttc 22300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 11910079 - 11909978
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccc-acacgtgggcggtgggattggtcc-ctcggattagtc 352  Q
    |||||| |||||| ||||| |||||||||||  | ||||| ||| |||||||| | |||||| ||| |||| ||||||||||||||| |||| |||||||    
T  11910079 ctggtgtcaattttggtggtcaagtccatacgaagctttgttctagctttaaacgaggcccctacaagtggacggtgggattggtcctctcgaattagtc 11909980  T
Q  353 ga 354  Q
    ||    
T  11909979 ga 11909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 25102862 - 25102809
Alignment:
Q  326 cggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||||| ||||    
T  25102862 cggtgggattggttccttcggattagtcgattcttggatcagataccgattttt 25102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  324 ggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtt 376  Q
    |||||||||||||||||| |||| |||||||  |||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 47381034 - 47381091
Alignment:
Q  321 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||||||||| | ||||||||   |||| ||||||||| |||||||    
T  47381034 gtgggcggtgggattggtcccttgaattagtcggtccttgaatcggatactgagtttt 47381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 22299909 - 22299945
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc 276  Q
    ||||||||||||| | |||||||||||||||||||||    
T  22299909 tcaagttcgattccctctggtgccaatttcggtgggc 22299945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 42814928 - 42814995
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg 311  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||| ||  |||||||| ||||||||||    
T  42814928 gttcgattccctctggtgtcaatttcggtgggctaagtccataca-aagcttgctctgactttaaatgg 42814995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 34147406 - 34147544
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  34147406 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34147504  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34147505 cctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 34160022 - 34160160
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  34160022 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34160120  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34160121 cctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 21982457 - 21982320
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  ||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21982457 gttcgattcccgatggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21982359  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21982358 ctcggattagtcgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 3222772 - 3222635
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 341  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| |||| || |||||||||||||||||||||    
T  3222772 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgtctttaaacggggccccgcaagtgggcggtgggattggtccc 3222674  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  3222673 ctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 9208312 - 9208449
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-c 340  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||  |||| || ||||||||||||||||||| |    
T  9208312 gttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtctc 9208411  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||| || ||||||| |||||||||  ||||||||||||    
T  9208412 ctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 15360235 - 15360097
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  15360235 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 15360137  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  15360136 cctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 11448931 - 11449068
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||  |||| || |||||||||||||||||| |    
T  11448931 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 11449029  T
Q  340 cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  11449030 cctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 654283 - 654146
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  654283 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 654185  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| | |||||||||||||||||||||    
T  654184 cctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 377
Target Start/End: Original strand, 9239035 - 9239171
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||  ||||||||| ||| ||| ||| ||||||||||||||  |||| || ||||||||||||||||||||    
T  9239035 gttcgattccctctggtgccaatttcggtgggttaagtccatatagagctt-gctttggctttaaatggggcccccgcaagtgggcggtgggattggtcc 9239133  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  9239134 cctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 21148651 - 21148510
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg 337  Q
    ||||||||||||| | || |||||||||||| ||||| ||||||||||||| ||| |||||| ||||||| ||| |||| || |||||||||||||||||    
T  21148651 tcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccccgcaagtgggcggtgggattgg 21148553  T
Q  338 tccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||    
T  21148552 tcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 1344995 - 1345133
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||| | ||| |||||||||||||| ||||||| | |  |||| |||||||||||||||    
T  1344995 gttcgattccctctggtgccaatttcagtgggctaagtccatacaaagctt-gctctggctttaaacgggccccccgcaagtggacggtgggattggtcc 1345093  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  1345094 ccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 9690756 - 9690638
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc-ctcggattagtcgaatct 358  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||| |||  |||| ||||||||||||||| |||||||||||||| |||    
T  9690756 caatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattct 9690658  T
Q  359 tggatcggataccgagtttt 378  Q
    ||||||||||||||||||||    
T  9690657 tggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 33499547 - 33499672
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    |||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||    
T  33499547 ctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcggtgggattggtcccctcggattagtc 33499646  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
       |  |||| |||||||||||||||    
T  33499647 agttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 5360192 - 5360071
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 355  Q
    ||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||   ||||||| ||||||||||||||||||||| ||| |||||||||     
T  5360192 tgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgat 5360094  T
Q  356 tcttggatcggataccgagtttt 378  Q
    |||| ||||||||||||||||||    
T  5360093 tcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 28672127 - 28672264
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||| ||||||| ||||||||||||| ||| | | |||||||||| ||||||| | |  ||||||||||||||||||||    
T  28672127 gttcgattccctctggtgtcaattttggtgggctaagtccatacagagctt-gttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcc 28672225  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| ||||||||| |||||||||||||    
T  28672226 cctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 12390485 - 12390620
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  | || |||| || |||||||||||||||||| |    
T  12390485 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 12390583  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||   ||  ||||||||||||||||||    
T  12390584 cctcggattagtcga---ttaaatcggataccgagttttc 12390620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 10377788 - 10377911
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||| ||| |||   ||||||| ||||||||||| |||||| |||||||| |||||    
T  10377788 tggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtc 10377887  T
Q  353 gaatcttggatcggataccgagtt 376  Q
    |   ||||||| ||||||||||||    
T  10377888 ggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 17081195 - 17081053
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||| |||||||||||  |||| || ||||||||||||||||    
T  17081195 tcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattg 17081097  T
Q  337 gt-ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    || |||||| || ||| |  |||||||||| |||||||||||||    
T  17081096 gtcccctcgaataagttgtttcttggatcgaataccgagttttc 17081053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 15730579 - 15730495
Alignment:
Q  297 tctggctttaaa--tgggccccacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  15730579 tctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 9844010 - 9844136
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagt 351  Q
    |||||| |||||| ||||||  ||||||||||||| ||| | |||||||||||| |||  |||| || |||||||||| ||||||||||| |||||||||    
T  9844010 ctggtgtcaattttggtgggttaagtccatacagagctt-gttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagt 9844108  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| |||||||||||||| |||||||||    
T  9844109 cgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 376
Target Start/End: Complemental strand, 17149593 - 17149458
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| | ||||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||||  |||| || |||  ||||||||||||| ||    
T  17149593 gttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtccc 17149494  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtt 376  Q
    |||| ||||||||   |||| ||| |||||||||||    
T  17149493 ctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 378
Target Start/End: Complemental strand, 14504200 - 14504082
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatctt 359  Q
    |||||||| |||| ||||||||||||   |||||||||| ||||||||||  |||| || |||||||||||||||| ||| |||| |||||||||  |||    
T  14504200 caatttcgatgggtaagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatcctt 14504101  T
Q  360 ggatcggataccgagtttt 378  Q
    | |||||||||||||||||    
T  14504100 gtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 14213010 - 14213080
Alignment:
Q  310 gggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  14213010 gggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 378
Target Start/End: Original strand, 11840963 - 11841097
Alignment:
Q  246 tcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-t 342  Q
    ||||||| | ||||||||||||||||||||  ||||||||||| | ||| ||| ||| |||||| ||| ||||| | |||| |||||||||| ||||| |    
T  11840963 tcgattccctctggtgccaatttcggtgggttaagtccatacaaagctt-gctttggttttaaacggggccccataagtggacggtgggattagtcccct 11841061  T
Q  343 cggattagtcgaatcttggatcggataccgagtttt 378  Q
    || ||||||||| | |||||||||||||||||||||    
T  11841062 cgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 11007244 - 11007363
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 358  Q
    |||||||||||||| ||||||||||| | ||| ||||| |||||||  |||  |||| || ||||||||||||||||| ||| ||||||||||||| |||    
T  11007244 caatttcggtgggctaagtccatacaaagctt-gctctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattct 11007342  T
Q  359 tggatcggataccgagttttc 379  Q
    | ||||||||||| |||||||    
T  11007343 ttgatcggatacctagttttc 11007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 17225739 - 17225863
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggtc-cctcggattagtcg 353  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| | ||  ||  ||||||| ||  ||||||||||||||| || |||| |||||||||    
T  17225739 ctggtgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggattgatctcctcagattagtcg 17225838  T
Q  354 aatcttggatcggataccgagtttt 378  Q
       ||| ||||||||| ||||||||    
T  17225839 gtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 6383998 - 6383919
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 335  Q
    |||||||||||| |||||| |||||||| ||| ||||||| ||||||||||||||  ||||||| |||| | ||||||||    
T  6383998 ggtgccaatttcagtgggctagtccataaagagctttgctttggctttaaatgggacccccacaagtggacagtgggatt 6383919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 21903748 - 21903618
Alignment:
Q  259 gtgccaatttcggtgggcaagtccatacagaactttgctctggct------ttaaatgggcc-cca-cacgtgggcggtgggattggtccc--tcggatt 348  Q
    |||||| |||| ||||| ||||||||||||| |||||||||||||      ||||||||| | ||| || ||||||||||||| |||||||  || ||||    
T  21903748 gtgccattttcagtgggtaagtccatacagagctttgctctggctctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagatt 21903649  T
Q  349 agtcgaatcttggatcggataccgagttttc 379  Q
    |||||| ||||||||||||| | ||||||||    
T  21903648 agtcgattcttggatcggatgcagagttttc 21903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 3907597 - 3907657
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctgg 301  Q
    ||||||||||||||| |||||||||||||  | |||||||||||||||  ||||||||||||    
T  3907597 tcaagttcgattctctctggtgccaattt-tgcgggcaagtccatacaagactttgctctgg 3907657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 17706408 - 17706318
Alignment:
Q  292 tttgctctggctttaaa-tgggccc-cacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||| ||||||| | || |||| ||||| |||||||  |||||||| |||| | |||||||||||||||||| |||||    
T  17706408 tttgctctggctttaaactgggccctcgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggataccgaattttc 17706318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 379
Target Start/End: Complemental strand, 7491698 - 7491665
Alignment:
Q  346 attagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||| ||||||||||||||||||||||||    
T  7491698 attagtcgattcttggatcggataccgagttttc 7491665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 12591697 - 12591761
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||| | || ||||||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  12591697 gttcgattccctctcgtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaa 12591761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 33718527 - 33718478
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggata 369  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  33718527 gtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 9583432 - 9583464
Alignment:
Q  243 agttcgattctccctggtgccaatttcggtggg 275  Q
    |||||||||||| ||||||||||||||||||||    
T  9583432 agttcgattctctctggtgccaatttcggtggg 9583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 44946190 - 44946052
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  44946190 gttcgattccctttggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 44946092  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  44946091 cctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 24196064 - 24196200
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggt-ccc 341  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||| |||    
T  24196064 gttcgattccctctggtgcaaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccgcaagtgggcggtgggattggtcccc 24196162  T
Q  342 tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||| | || ||| |||||||||||||||    
T  24196163 tcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 30466967 - 30466830
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || |||||| |||||||||||||    
T  30466967 gttcgattctctctgctgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcc 30466869  T
Q  341 ct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    || |||||||||||| |||||||||||||||||||||||    
T  30466868 cttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 33827710 - 33827572
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||||||||||||||||    
T  33827710 gttcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacgggacccctgcaagtgggcggtgggattggtcc 33827612  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  33827611 ccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 35171860 - 35171998
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||  ||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  35171860 gttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35171958  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  35171959 cctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 2140620 - 2140485
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac---acgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| ||||||||||||   |||||||||||| ||| |||||||||||||||||||||| |   | ||||||||||||||||||||    
T  2140620 gttcgattccctctggtgtcaatttcggtgg---agtccatacagagctt-gctctggctttaaatgggcccccccgcaagtgggcggtgggattggtcc 2140525  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| | ||||||||||||||||||||||    
T  2140524 cctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 257 - 379
Target Start/End: Original strand, 28668946 - 28669071
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    |||||||||||||||||| | ||||||||||||| ||| ||| |||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtc 28669044  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
    || | ||||||||||||||||||||||    
T  28669045 gatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 11941334 - 11941210
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    |||||||||||| ||||||  ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| |||||||||||    
T  11941334 tggtgccaattttggtgggttaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtc 11941236  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
    || |||||||||||||||||||||||    
T  11941235 gattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 8192488 - 8192351
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggatt-ggtccc 341  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||  || || ||| | || ||||||||||||||| || |||    
T  8192488 gttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattgggcccc 8192389  T
Q  342 tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||   |||||||||||||||||||||||    
T  8192388 tcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 17324826 - 17324961
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| || ||    
T  17324826 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgggcccccacaagtgggcggtgggattagtccc 17324924  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||  ||||||||| |||| ||||||||| ||||||||    
T  17324925 ctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 15038019 - 15038157
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||| ||| ||| |||||||||| ||   |||| || ||||||||||||||||||||    
T  15038019 gttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaagtgggcggtgggattggtcc 15038117  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | || |||||||||| ||||||||||||||||||||||||    
T  15038118 cctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 34516530 - 34516413
Alignment:
Q  264 aatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatcttg 360  Q
    ||||||||||||| ||||||||||||| ||| ||||| |||||||| |||||||  || ||||||||||||||||||||| ||||||||||||| |||||    
T  34516530 aatttcggtgggctaagtccatacagagctt-gctctcgctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  361 gatcggataccgagttttc 379  Q
    ||||||||||| |||||||    
T  34516431 gatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 36390693 - 36390569
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 352  Q
    ||||||||||||||||||| | ||||||||||| | ||| |||||| |||||||||||  |||| || ||||||||||||||||||||||||||| ||||    
T  36390693 ctggtgccaatttcggtggactaagtccatacaaagctt-gctctgactttaaatgggacccccgcaagtgggcggtgggattggtccctcggatcagtc 36390595  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
    ||  |||| |||||||||||||||||    
T  36390594 gatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 43374462 - 43374329
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccct 342  Q
    ||||||||| | ||||||||||||||||||||| ||||  ||||| | ||| |||||||||||||   | |||| || ||| ||||||||||||||||||    
T  43374462 gttcgattccctctggtgccaatttcggtgggctaagtttatacaaagctt-gctctggctttaa---gcccccgcaagtgagcggtgggattggtccct 43374367  T
Q  343 -cggattagtcgaatcttggatcggataccgagttttc 379  Q
     |||||||||||| ||||||||||||||||||||||||    
T  43374366 tcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 4618822 - 4618754
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4618822 gttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaatggg 4618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 371
Target Start/End: Complemental strand, 36242449 - 36242319
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||||||||| |||||||  |||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  36242449 gttcgattccctctggtgtcaatttcggtgggctaagtccagccagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 36242351  T
Q  341 c-tcggattagtcgaatcttggatcggatacc 371  Q
    | |||||||| |||| ||||||||||||||||    
T  36242350 cctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 379
Target Start/End: Original strand, 19054108 - 19054224
Alignment:
Q  267 ttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttgg 361  Q
    |||||||||| ||||||||||||| ||| ||| |||||||||||||    |||| || |||||||||||||||||||| |||||||||||||| ||||||    
T  19054108 ttcggtgggctaagtccatacagagctt-gctttggctttaaatggaaccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttgg 19054206  T
Q  362 atcggataccgagttttc 379  Q
    ||| ||||||||||||||    
T  19054207 atcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 245 - 342
Target Start/End: Complemental strand, 26176333 - 26176235
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccct 342  Q
    |||||||||||||||||||||||| ||||| | |||||||||||| ||||||| ||| |||||||||| |||| || |||| |||||||||||| ||||    
T  26176333 ttcgattctccctggtgccaattttggtggcctagtccatacagacctttgctttggatttaaatgggcccccgcaagtggacggtgggattggaccct 26176235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 245 - 378
Target Start/End: Original strand, 41329904 - 41330039
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 341  Q
    |||||||| | ||||||||||||| || |||| ||||||||| ||| ||| ||||||||||||||||||  ||||||| |||||||||| ||||||||||    
T  41329904 ttcgattccctctggtgccaattttggcgggctaagtccata-agagctt-gctctggctttaaatggggcccccacaagtgggcggtgagattggtccc 41330001  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     || |||||||||  ||||||| |||||||||||||||    
T  41330002 ctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 378
Target Start/End: Complemental strand, 27269467 - 27269344
Alignment:
Q  258 ggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc-tcggattagtcg 353  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||||||||||  | ||  || || |||||||||||||||| |||| ||||||||||||    
T  27269467 ggtgtcaatttcggtgggctaagtccatatagaactt-gctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcg 27269369  T
Q  354 aatcttggatcggataccgagtttt 378  Q
    | |||||||| ||||||||||||||    
T  27269368 attcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 379
Target Start/End: Original strand, 3943801 - 3943938
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc 341  Q
    ||||||| || ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||| |||||||||||||||    
T  3943801 ttcgattttctctggtgccaatttcggttggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccc 3943899  T
Q  342 -tcggattagtcgaatcttggatcggataccgagttttc 379  Q
     | ||||||||||  | |||||||||||||| |||||||    
T  3943900 cttggattagtcggttattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 18692091 - 18692158
Alignment:
Q  313 ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 44976291 - 44976172
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 339  Q
    ||||||||| | ||||||||||||| ||||||| |||||||||||| | ||||||||||||||||| |||   |||| || |||||||||||||||| ||    
T  44976291 gttcgattccctctggtgccaattttggtgggctaagtccatacag-agtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatc 44976193  T
Q  340 cc-tcggattagtcgaatctt 359  Q
    || ||||||||||||| ||||    
T  44976192 ccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 13266550 - 13266686
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 341  Q
    ||||||||| | |||||||||||| |||||| | ||||||||||||| ||| |||||||||||||| ||| |||| || |||||   |||||||||||||    
T  13266550 gttcgattcactctggtgccaattccggtggactaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggtaatgggattggtccc 13266648  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||  ||||||||| |||||||||||||| ||||||||    
T  13266649 ctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 25293269 - 25293356
Alignment:
Q  295 gctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25293269 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 5394077 - 5394215
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||| |||||||| ||||| |||||||||||||  ||||||||| ||||||||||| ||  | || ||||||||||||||||||||    
T  5394077 gttcgattccctctggtgtcaatttcgatgggctaagtccatacagag-tttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtcc 5394175  T
Q  341 -ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
      ||||||||||||   ||| ||||||||||||| |||||    
T  5394176 gttcggattagtcggtccttagatcggataccgaattttc 5394215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 19174835 - 19174959
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggt-ccctcggattagtcg 353  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||  || || |||||  |  ||||||||||||||| | ||||||||||| |||    
T  19174835 ctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattgatcccctcggattaatcg 19174934  T
Q  354 aatcttggatcggataccgagtttt 378  Q
       ||||||||||||||||| ||||    
T  19174935 gtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 10582127 - 10581995
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||||| |||||||| |||||| | || |||||| ||||||||||| ||    
T  10582127 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgggccctcgcaagtgggc-gtgggattggtccc 10582030  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||   ||  |||||||||||||||||    
T  10582029 ctcgaattagtcga---ttaaatcggataccgagtttt 10581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 41314052 - 41314189
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| | |||||| |||||||||||||| ||||| ||||||| | |||||||| ||||||| |||  ||| || |||| ||||||||||||| ||    
T  41314052 gttcgattccctctggtgtcaatttcggtgggctaagtctatacagagc-ttgctctgactttaaacgggatcccgcaagtggacggtgggattggtccc 41314150  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||| ||||| |||| |||| ||||||||||| |||||||    
T  41314151 ctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 28194270 - 28194225
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacaga 289  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28194270 gttcgattctctctggtgccaatttcggtgggcaagtccatacaga 28194225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 14946839 - 14946975
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggt-ccc 341  Q
    |||||||| || |||||| ||||||| |||||| |||||||||| || || |||||| |||||||| || |||| || || ||| ||||||||||| |||    
T  14946839 gttcgattttctctggtgtcaatttcagtgggctaagtccatacggagctatgctctagctttaaacggaccccccaagtaggcagtgggattggtcccc 14946938  T
Q  342 tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    || ||||||||   | |||||||||| ||||||||||    
T  14946939 tcagattagtcagtttttggatcggagaccgagtttt 14946975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 19605962 - 19605846
Alignment:
Q  264 aatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttgg 361  Q
    ||||||||||||||||||||||||||   |||||||  |||  ||| ||| |||||| |||||||||| ||||||| |||||| |||||| ||  |||||    
T  19605962 aatttcggtgggcaagtccatacagagtcttgctctcacttagaaagggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttgg 19605863  T
Q  362 atcggataccgagtttt 378  Q
    |||||||| ||||||||    
T  19605862 atcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 4567562 - 4567428
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcg--------gtgggattggtcc-ctc 343  Q
    ||||||||||||||||||||| || |||||||||| | ||| |||||||||||| |||  ||||||| |||||||        ||||||||||||| |||    
T  4567562 ctggtgccaatttcggtgggctaaatccatacagagc-ttgttctggctttaaacggggcccccacaagtgggcggtgggattgtgggattggtcctctc 4567464  T
Q  344 ggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||| | |||||||||||||||| |||||||    
T  4567463 ggattagtcaattcttggatcggatacccagttttc 4567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 14486964 - 14487023
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  14486964 gtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 18976513 - 18976454
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  18976513 gtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 39957897 - 39957956
Alignment:
Q  321 gtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  39957897 gtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 31778140 - 31778228
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||||||||||  |||| || |||| ||||| ||||||||| ||| ||||||||   |||||||||||||||||||||||    
T  31778140 ttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 44610148 - 44610236
Alignment:
Q  293 ttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||| |||||||||||| |||   || ||||||||||||||||||||| ||||||||||||  ||||||| || ||||||||||||    
T  44610148 ttgctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 8258957 - 8259095
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||  |||||||| ||||||  ||||||||||||| ||| | |||||||||||  |||  |||| || || |||||||||||| || |    
T  8258957 gttcgattccctctgacgccaattttggtgggttaagtccatacagatctt-gttctggctttaatcggggcccccgcaagtaggcggtgggattagttc 8259055  T
Q  341 ct-cggattagtcgaatcttggatcggataccgagttttc 379  Q
    || |||||||||||| ||||||||||||||| ||||||||    
T  8259056 cttcggattagtcgattcttggatcggatactgagttttc 8259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 13747628 - 13747576
Alignment:
Q  258 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 310  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||||||||||    
T  13747628 ggtgccgatttcggtgggctagtccatacagtgctttgctctggctttaaatg 13747576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 27290732 - 27290772
Alignment:
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  27290732 ccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 45132398 - 45132477
Alignment:
Q  295 gctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggatacc 371  Q
    |||||||||||||| |||  ||||||| |||||| || |||||||||| ||||||||| |||| ||||||||||||||||    
T  45132398 gctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 378
Target Start/End: Complemental strand, 6007025 - 6006890
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtc-cct 342  Q
    |||||||||| ||| | ||||||||||||  | |||||||||||| ||||| ||| |||| |||||| || |  || |||| ||||| |||||||| |||    
T  6007025 ttcgattctctctgataccaatttcggtgttcgagtccatacagagctttgttctagcttaaaatggagctctgcaagtggacggtgtgattggtctcct 6006926  T
Q  343 cggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||  |||| ||| |||||||||||||    
T  6006925 cagattagtcgatccttgaatcagataccgagtttt 6006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 27290662 - 27290720
Alignment:
Q  258 ggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||    
T  27290662 ggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc 27290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 12543205 - 12543259
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctct 299  Q
    ||||||| || || |||||||||| |||||||||||||||||||| |||||||||    
T  12543205 ttcgattttctctagtgccaattttggtgggcaagtccatacagagctttgctct 12543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 44929904 - 44929846
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||||||||||| | | ||||||||| |||||||||||||||||||||||    
T  44929904 gtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 35797522 - 35797587
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 309  Q
    |||||||| || |||||| |||||| ||||||||||| |||||| ||||||| | |||||||||||    
T  35797522 gttcgattttctctggtgtcaattttggtgggcaagttcatacaaaactttggtttggctttaaat 35797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 45271444 - 45271508
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaa 45271508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 30943152 - 30943208
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgc 296  Q
    ||||||| ||||||| ||  ||||||||||||||||| |||||||||||| ||||||    
T  30943152 tcaagtttgattctctcttatgccaatttcggtgggctagtccatacagagctttgc 30943208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 9641101 - 9641208
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttgg 361  Q
    |||||| |||||| ||||||||||| ||||||||| |||||||||| |    | |  | |||| ||||| |||||||||||| |||||||||  ||||||    
T  9641101 caattttggtgggtaagtccatacaaaactttgctttggctttaaacgacatctcgtaagtggacggtgagattggtccctcagattagtcggttcttgg 9641200  T
Q  362 atcggata 369  Q
    ||||||||    
T  9641201 atcggata 9641208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 19525533 - 19525490
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccataca 287  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||    
T  19525533 gttcgattccctctggtgccaattttggtgggcaagtccataca 19525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 38784295 - 38784181
Alignment:
Q  265 atttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggat 363  Q
    |||||||||| |||||||||||  ||||||  | || |||||||| |||||| || |||| ||||| ||||| |||| || ||||||| || |||| |||    
T  38784295 atttcggtggacaagtccatactaaactttaatttgactttaaataggccccgcaagtggacggtgagattgatcccttcagattagttgattcttagat 38784196  T
Q  364 cggataccgagtttt 378  Q
    |  ||||||||||||    
T  38784195 caaataccgagtttt 38784181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  331 ggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  1501511 ggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 1501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 378
Target Start/End: Original strand, 4852657 - 4852726
Alignment:
Q  310 gggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||| || |||| |||||| ||||||||| |||||||| |||| ||||||||||||| || ||||||    
T  4852657 gggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 23787133 - 23787077
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||| |||||||||||    
T  23787133 ctggtgccaatttcggtgggctaaatccatacag-agtttgctctgactttaaatggg 23787077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 40591255 - 40591288
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacaga 289  Q
    |||||| |||||||||||||||||||||||||||    
T  40591255 ctggtggcaatttcggtgggcaagtccatacaga 40591288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 3405289 - 3405225
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 308  Q
    ||||||||| | |||||||||||||   |||||||||||||||| | |||| |||| ||||||||    
T  3405289 gttcgattccctctggtgccaattttaatgggcaagtccatacaaagctttactctagctttaaa 3405225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 16510305 - 16510361
Alignment:
Q  260 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    |||||||||| |||||| |||||||||| | |  |||||||||||||||||| ||||    
T  16510305 tgccaatttctgtgggctagtccatacaaagcaatgctctggctttaaatggccccc 16510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 28194193 - 28194137
Alignment:
Q  324 ggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| | || |||||||||   |||||||||||||||||||||||    
T  28194193 ggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttc 28194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 29698219 - 29698263
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctg 300  Q
    |||||| |||||||||||||||||| |||||||| |||| |||||    
T  29698219 ctggtgtcaatttcggtgggcaagttcatacagagctttactctg 29698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 4621374 - 4621236
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  4621374 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 4621276  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  4621275 cctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 15059539 - 15059401
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||| |||||||||    
T  15059539 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgagattggtcc 15059441  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  15059440 cctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 24122083 - 24122220
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  24122083 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 24122181  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  24122182 cctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 9500492 - 9500355
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||   ||||||| |||||||||| ||||||||     
T  9500492 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcccccacaagtgggcggtgagattggtct 9500394  T
Q  341 ct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    || |||||||||||| |||||||||||||| ||||||||    
T  9500393 cttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 24674453 - 24674590
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  24674453 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 24674551  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||| ||||||||| |||||||||||||||||| ||||    
T  24674552 cctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 17935844 - 17935965
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 354  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||| |||  |||| || ||||||| |||||||||||| ||||||||||||||    
T  17935844 gtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcga 17935942  T
Q  355 atcttggatcggataccgagttt 377  Q
     ||||||||||||||||||||||    
T  17935943 ttcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 32729605 - 32729742
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-cc 340  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  |||| || |||||||||||||||| | ||    
T  32729605 gttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatccc 32729703  T
Q  341 ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    || ||||||||||    ||||||||||||||||||||||    
T  32729704 cttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 7766864 - 7766726
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  7766864 gttcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgggattggtcc 7766766  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||| |||||||| |||||||||    
T  7766765 cctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 27455003 - 27454863
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacg----tgggcggtgggattggt 338  Q
    ||||||||| | ||| |||||||||||||| || ||||||||||||| ||| |||||||||||||| ||||||| | ||    |||||||||||||||||    
T  27455003 gttcgattcactctgatgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacgggccccccccgcatgtgggcggtgggattggt 27454905  T
Q  339 ccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||| ||||||||||||| |||||||||||||||| |||||||    
T  27454904 cccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 7197383 - 7197247
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccca-cacgtgggcggtgggattggtccc 341  Q
    ||||||||| | ||| |||||||||||||||| ||||| ||||||| ||| |||||||||||||| | ||||||  || |||||||||| ||||||||||    
T  7197383 gttcgattccctctgatgccaatttcggtgggtaagtcaatacagacctt-gctctggctttaaacgaggcccctgcaagtgggcggtgagattggtccc 7197285  T
Q  342 -tcggattagtcgaatcttggatcggataccgagtttt 378  Q
     ||||||||||||| || ||||||||||||||||||||    
T  7197284 ctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 376
Target Start/End: Original strand, 8077707 - 8077841
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  | || |||| || ||||||||||||||||||||    
T  8077707 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 8077805  T
Q  341 ctcggattagtcgaatcttggatcggataccgagtt 376  Q
    |   ||||| |||| | |||||||||| ||||||||    
T  8077806 cctcgattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 8254889 - 8254751
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    |||||||| || |||||| |||||||||||||| |||| |||||||||||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  8254889 gttcgattatctctggtgtcaatttcggtgggctaagttcatacagaactt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 8254791  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | | | ||||||||| ||||| ||||||||||||||||||    
T  8254790 ccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 30677248 - 30677374
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagt 351  Q
    ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||  |||| || |||||||||||||||||| ||||| |||||||    
T  30677248 ctggtgccaatttcggtgggctaagtccatacagagc-ttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcccctcagattagt 30677346  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||  ||||||| |||||| |||||||||    
T  30677347 cggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 256 - 374
Target Start/End: Original strand, 1378970 - 1379090
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 352  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||  || |||| ||||| |||||||||| || ||||||||    
T  1378970 ctggtgtcaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtc 1379068  T
Q  353 gaatcttggatcggataccgag 374  Q
    || |||| ||||||||||||||    
T  1379069 gattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 46607870 - 46608008
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| ||   |||| || |||||||||||||||| | |    
T  46607870 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcc 46607968  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||   ||||||||||||| |||||||||    
T  46607969 cctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 7578469 - 7578607
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-c 339  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||| | ||| |||||| ||||||| ||| ||| | |  ||||| |||||||||||| |    
T  7578469 gttcgattccctatggtgccaatttcggtgggctaagtccatacaaagctt-gctctgactttaaacggggccctcgcaagtgggtggtgggattggttc 7578567  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||| || | ||||||||||||||||||||||    
T  7578568 cctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 37351538 - 37351454
Alignment:
Q  295 gctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  37351538 gctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 26513235 - 26513148
Alignment:
Q  293 ttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||| ||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  26513235 ttgctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 36156025 - 36155888
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| |||||||| |||| ||| ||| | | ||||||  ||  |||| || ||||||||||||||||||||    
T  36156025 gttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt-gctttagttttaaacagggcccccgcaggtgggcggtgggattggtcc 36155927  T
Q  341 ct-cggattagtcgaatcttggatcggataccgagtttt 378  Q
    || |  ||||||||| |||||||||||||||||||||||    
T  36155926 cttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 18646913 - 18647045
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg-gcccc-acacgtgggcggtgggattggt-c 339  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| || |||||   | |||||||||| ||||| | |    
T  18646913 gttcgattctctctggtgccaatttcggtgggctaagtctataca-aagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcc 18647011  T
Q  340 cctcggattagtcgaatcttggatcggataccga 373  Q
    ||||| ||||||||| ||||| ||||||||||||    
T  18647012 cctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 36921616 - 36921513
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccga 373  Q
    ||||||||||| ||||||| ||||||||||||||||   |||| || |||| |||||||||| |||||||  ||||||||| | ||| ||||||||||||    
T  36921616 aagtccatacaaaactttgatctggctttaaatgggaccccccgcaagtggacggtgggattagtccctcaaattagtcgattattgaatcggataccga 36921517  T
Q  374 gttt 377  Q
    ||||    
T  36921516 gttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 37047056 - 37047164
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcg 344  Q
    ||||| ||||||| | ||||| ||||||| |||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||||||||||||  |||| |    
T  37047056 gattccccctggtacaaattttggtgggctagtccatacagagctttgctctagctttaaatggggcccccacaagtggacggtgggattggacccctag 37047155  T
Q  345 gattagtcg 353  Q
    |||||||||    
T  37047156 gattagtcg 37047164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 19034523 - 19034467
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctg 300  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||    
T  19034523 gttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 378
Target Start/End: Complemental strand, 40802200 - 40802069
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc-ctcgg 345  Q
    |||||||| |||||||||||| | || ||||||||||||||| | |||||||| ||||||| ||| |||| || ||||| |||| ||||||||| || |     
T  40802200 gattctccatggtgccaattttgatgagcaagtccatacagagc-ttgctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctaga 40802102  T
Q  346 attagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||| ||||| |||| ||||||||||||    
T  40802101 attagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 240 - 341
Target Start/End: Original strand, 7946900 - 7947002
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattgg 337  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| ||||||| | ||||||| ||||||||| ||||||| || ||||| |||| ||||||    
T  7946900 tcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctcgctttaaatggggccccgcaagtgggtggtgagattgg 7946998  T
Q  338 tccc 341  Q
    ||||    
T  7946999 tccc 7947002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 1486478 - 1486617
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg----ccccacacgtgggcggtgggattggt- 338  Q
    ||||||||| |  |||||||||||||| |||| ||||||||||||| |||||||||| |||  || |||    |||| || |||| ||||||||| |||     
T  1486478 gttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcggtc 1486577  T
Q  339 ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||| |||||||||   ||||||||||||||||||||||    
T  1486578 ccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 23734176 - 23734315
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 338  Q
    ||||||||| | ||| ||||||||||||||||| |||||||||||| | |||||| || ||||||| |||   |||| || ||||||||||  ||||||     
T  23734176 gttcgattccctctgatgccaatttcggtgggctaagtccatacag-agtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23734274  T
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| |||||||||| ||||| |||||||||| |||||||    
T  23734275 ccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 23741368 - 23741507
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 338  Q
    ||||||||| | ||| ||||||||||||||||| |||||||||||| | |||||| || ||||||| |||   |||| || ||||||||||  ||||||     
T  23741368 gttcgattccctctgatgccaatttcggtgggctaagtccatacag-agtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23741466  T
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| |||||||||| ||||| |||||||||| |||||||    
T  23741467 ccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 34778447 - 34778535
Alignment:
Q  292 tttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 377  Q
    |||||| |||||||||| |||  |||| || |||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  34778447 tttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 8779854 - 8779744
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 358  Q
    |||||||||||||| ||||||||||| | |||  |||| |||||||| |||  ||||||| || |||||||||||||||||| ||||||||||||| |||    
T  8779854 caatttcggtgggctaagtccatacacagctta-ctctagctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattct 8779756  T
Q  359 tggatcggatac 370  Q
    | ||||||||||    
T  8779755 tagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 16539680 - 16539804
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt-ccctcggattagtcg 353  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||||||  ||  ||||||   | ||||| |||||||||||| |||||  ||||||||    
T  16539680 ctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgggattggtcccctcaaattagtcg 16539779  T
Q  354 aatcttggatcggataccgagtttt 378  Q
    |  |||| |||||||||||| ||||    
T  16539780 atacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 378
Target Start/End: Original strand, 31162812 - 31162947
Alignment:
Q  246 tcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtc-cct 342  Q
    ||||||| | ||||| ||||||||||||| || || |||||||  ||||||||| |||||||||||| |||||||  ||| || ||| ||||||||  ||    
T  31162812 tcgattcactctggtaccaatttcggtggacaggtacatacagtgctttgctctagctttaaatggggcccacacaagtgagcagtgagattggtcatct 31162911  T
Q  343 cggattagtcgaatcttggatcggataccgagtttt 378  Q
    |  |||||||||  |||| |||||||||||||||||    
T  31162912 ctaattagtcgatccttgaatcggataccgagtttt 31162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 19480595 - 19480708
Alignment:
Q  245 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattgg-tc 339  Q
    |||||||| ||  |||||||||||  |||||| ||||||||| ||| || |||||||||||||||||||   |||| ||||||| |||||||||||| ||    
T  19480595 ttcgattccccgcggtgccaattttagtgggctaagtccatatagagctatgctctggctttaaatgggtacccccgcacgtggacggtgggattggatc 19480694  T
Q  340 cctcggattagtcg 353  Q
    |||||| |||||||    
T  19480695 cctcgggttagtcg 19480708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 39714791 - 39714649
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg 337  Q
    ||||||| ||||||||  |||||| |||||||||||| ||||||    || ||||||||||| ||||||||||  ||||||| ||||  |||||||||||    
T  39714791 tcaagtttgattctcctcggtgccgatttcggtgggctagtccaaggggagctttgctctggatttaaatgggccccccacaagtggatggtgggattgg 39714692  T
Q  338 tc-cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
     | ||||||||||||||   |||||   |||||||||||||||    
T  39714691 actcctcggattagtcggtccttgggctggataccgagttttc 39714649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 45859180 - 45859043
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||   | ||||||| |||||||  | || |||| || ||||| ||| |||||||| |    
T  45859180 gttcgattccctctggtgccaatttcggtgggctaagtccatacatcgc-ttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcc 45859082  T
Q  340 cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||| || | |||||||||||||||| ||||    
T  45859081 cctcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 48699898 - 48699957
Alignment:
Q  321 gtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  48699898 gtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 1138639 - 1138748
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtccc 341  Q
    |||||| |||| || |||||||||||||||| |||||||||||||| |||||||||| |||  ||  || |||   || |||||| |||| |||||||||    
T  1138639 gttcgaatctctctagtgccaatttcggtggacaagtccatacagagctttgctctgacttagaacagggcccttgcaagtgggcagtggaattggtccc 1138738  T
Q  342 tcggattagt 351  Q
    ||||||||||    
T  1138739 tcggattagt 1138748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 16899563 - 16899620
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctgg 301  Q
    ||||||||| | ||||||||||||||||||||| |||||||||| | |||||||||||    
T  16899563 gttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctgg 16899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 340
Target Start/End: Complemental strand, 23232402 - 23232300
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactt---tgctctggctttaaatggg--ccccacacgtgggcggtgggattgg 337  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| |||    ||||||||||||||||||  |||| || ||||| |||||||||||    
T  23232402 gttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtgggattgg 23232303  T
Q  338 tcc 340  Q
    |||    
T  23232302 tcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 809292 - 809419
Alignment:
Q  254 ccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattgg-tccctcggattag 350  Q
    |||| ||| ||||||||||||||||||||||||| | | ||| ||||||||| |||||| |     ||  |||||||||||||||| ||| ||||| |||    
T  809292 ccctagtgtcaatttcggtgggcaagtccatacaaagccttgatctggctttgaatggggcatttgcaaatgggcggtgggattggttccttcggagtag 809391  T
Q  351 tcgaatcttggatcggataccgagtttt 378  Q
    |||| |||||||| |||||| |||||||    
T  809392 tcgattcttggattggatactgagtttt 809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 379
Target Start/End: Original strand, 14603954 - 14603994
Alignment:
Q  339 ccctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  14603954 ccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 25237126 - 25237070
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctg 300  Q
    ||||||||| | || |||||||||||||||||||||||||||||||  |||||||||    
T  25237126 gttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctg 25237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 379
Target Start/End: Original strand, 27159159 - 27159283
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcga 354  Q
    |||||||||||  |||||  |||| ||| |||||||||| || || |||||| |||||||  || |||| |||||||||||||||| || ||||||||||    
T  27159159 tggtgccaattatggtggataagttcatgcagaactttgttcgggttttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcga 27159258  T
Q  355 atcttggatcggataccgagttttc 379  Q
       |||||||||||| |||||||||    
T  27159259 tctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 34965401 - 34965457
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||    
T  34965401 ctggtgccaattttggtgagcaagtctatagaaaactttgctctggctttaaatggg 34965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 368
Target Start/End: Complemental strand, 43770103 - 43769975
Alignment:
Q  242 aagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc 340  Q
    ||||| |||||  ||| ||| |||||||  |||||||||||||||||| | |  ||||| | || |||||| |||||||  |||||||||||||||||||    
T  43770103 aagtttgattcctcctagtgtcaatttcaatgggcaagtccatacagagcataactctgaccttgaatgggaccccacaaatgggcggtgggattggtcc 43770004  T
Q  341 c-tcggattagtcgaatcttggatcggat 368  Q
    | ||| ||||||||| ||| |||||||||    
T  43770003 cttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 45331746 - 45331621
Alignment:
Q  257 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||| |||||||||| |||   |||| || |||| ||||||||||  |||| || ||||| |    
T  45331746 tggtggcaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaat 45331648  T
Q  352 cgaatcttggatcggataccgagtttt 378  Q
    ||| ||||| |||||||||||||||||    
T  45331647 cgattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 20907385 - 20907330
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||| || ||||||||    
T  20907385 tggtgccaatttcagtgggtaagtccatacagagctttgctctgactgtaaatggg 20907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 22910010 - 22910069
Alignment:
Q  321 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||||||||    
T  22910010 gtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttc 22910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  328 gtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  23041668 gtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 2783065 - 2783115
Alignment:
Q  260 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 310  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||    
T  2783065 tgccaatttcggtggacaagtccatatagagctttgctctggttttaaatg 2783115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  329 tgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 21726789 - 21726921
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| |  |||||||||||||| ||||  ||||||||| ||| ||| | ||| |||||||| |||  ||||||| |||||||||||| ||| |||    
T  21726789 gttcgattccctttggtgccaatttcgatgggttaagtccatatagagctt-gttctagctttaaacgggtcccccacaagtgggcggtggggttgatcc 21726887  T
Q  341 c-tcggattagtcgaatcttggatcggataccga 373  Q
    | || ||||| |||| ||||||||||||||||||    
T  21726888 cctcagattaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 35138127 - 35138185
Alignment:
Q  321 gtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||| | |||||||||||||||   ||||||||||||||||||||||    
T  35138127 gtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 40146008 - 40145889
Alignment:
Q  259 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-------acacgtgggcggtgggattggtccc-tcggatta 349  Q
    ||||||||||  |||||| ||||||||||||| ||| |||||| |||||||||||||||       ||| ||||| |||| | |||||||| ||||||||    
T  40146008 gtgccaatttatgtgggctaagtccatacagagctt-gctctgactttaaatgggcccccacaaccacaagtgggtggtgagtttggtcccctcggatta 40145910  T
Q  350 gtcgaatcttggatcggatac 370  Q
    ||||| |||||||||||||||    
T  40145909 gtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 1095128 - 1095088
Alignment:
Q  256 ctggtgccaatttcggtgggcaagtccatacagaactttgc 296  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  1095128 ctggtgccaatttcggtgggcaagtacatacagagctttgc 1095088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 2272420 - 2272542
Alignment:
Q  260 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtccc-tcggattagtcgaa 355  Q
    ||||||||||| ||||| |||| |||||| || ||||||||| ||||||| ||| |||  ||| | ||||||| |||||| |||| |||||||||||||     
T  2272420 tgccaatttcgctgggctaagttcataca-aagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgat 2272518  T
Q  356 tcttggatcggataccgagttttc 379  Q
    |||  |||||||||| ||||||||    
T  2272519 tctaagatcggatactgagttttc 2272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 20999287 - 20999235
Alignment:
Q  257 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 309  Q
    |||| ||||||||||||||| |||||||||||| |||| | ||||||||||||    
T  20999287 tggtaccaatttcggtgggctagtccatacagagctttacgctggctttaaat 20999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 40397406 - 40397342
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 312  Q
    ||||| || ||||| |||||||| |||||||||||||| ||| |||||  |||||||||||||||    
T  40397406 gattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggg 40397342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 17447338 - 17447432
Alignment:
Q  248 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtccc 341  Q
    ||||||| |||||||||||||  |||| ||| |||||||| | | ||||||||| |||||||||  |||| || ||||| ||||||||| |||||    
T  17447338 gattctctctggtgccaattttagtggacaattccatacaaagccttgctctggatttaaatggacccccgcaagtgggaggtgggatttgtccc 17447432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 26986206 - 26986084
Alignment:
Q  259 gtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattgg-tccctcggattagtcgaat 356  Q
    |||||||||||||||||| |||||||||| |  |||  ||||||||||||||| |||   |  |||| ||||||||||||  |||||||| ||||||       
T  26986206 gtgccaatttcggtgggctagtccatacaaagtttttttctggctttaaatggacccttgccagtggccggtgggattggacccctcggaatagtcggtc 26986107  T
Q  357 cttggatcggataccgagttttc 379  Q
    |||||  ||||||||||||||||    
T  26986106 cttgggccggataccgagttttc 26986084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 47360503 - 47360450
Alignment:
Q  263 caatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 316  Q
    ||||||| | |||| ||||||||| || ||||||||||||||||||||| ||||    
T  47360503 caatttctgcgggctagtccatacggagctttgctctggctttaaatggccccc 47360450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 6127999 - 6127963
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc 276  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  6127999 tcaagttcgattctccccggtgccaattttggtgggc 6127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 31605860 - 31605824
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggc 276  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  31605860 tcaagttcgattctccccggtgccaatttgggtgggc 31605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 5219 - 5081
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  5219 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 5121  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  5120 cctcggattagtcgattcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 240 - 379
Target Start/End: Original strand, 39148 - 39290
Alignment:
Q  240 tcaagttcgattctccctggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    ||||||||||||| | ||||||||||||||||||||| | ||||||||||||||| | |||||||||||| |||  |||| || ||||||||||||||||    
T  39148 tcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcccccgcaagtgggcggtgggattg 39246  T
Q  337 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  39247 gtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 161869 - 162007
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||  |||| || ||||||||||||||||||||    
T  161869 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggcttttaatggggcccccgcaagtgggcggtgggattggtcc 161967  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| ||||||||| ||||||||||||||    
T  161968 cctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 7446 - 7309
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||  |||| || ||||||||||||||||||||    
T  7446 gttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 7348  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | ||||||||||||| |||||||||||||||| ||||||    
T  7347 cctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 53008 - 52870
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaag-tccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||| ||| |||||||||||||| |||  |||| || ||||||||| ||||||||||    
T  53008 gttcgattccctctggtgccaatttcggtgggcaaaatccatacagagctt-gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcc 52910  T
Q  341 -ctcggattagtcgaatcttggatcggataccgagttttc 379  Q
     |||||||||||||| ||||| ||||||||||||||||||    
T  52909 tctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 9436 - 9299
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||| ||||||||||||| |    
T  9436 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 9338  T
Q  340 cctcggattagtcgaatcttggatcggataccgagttttc 379  Q
    ||||| ||||||||| |||| |||||||||||||||||||    
T  9337 cctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 12125 - 12000
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  12125 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtc 12027  T
Q  353 gaatcttggatc-ggataccgagttttc 379  Q
     | |||| |||| |||||||||||||||    
T  12026 aattctt-gatcgggataccgagttttc 12000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 1193 - 1057
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 339  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||| ||||||||||||| |    
T  1193 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 1095  T
Q  340 cctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    ||||| ||||||||| |||| ||||||||||||||||||    
T  1094 cctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 10818 - 10694
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggattagtc 352  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  10818 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtc 10720  T
Q  353 gaatcttggatcggataccgagttttc 379  Q
     | |||| |||||||||||||||||||    
T  10719 aattctt-gatcggataccgagttttc 10694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 32360 - 32485
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 351  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||| |  |||| || ||||| ||||||||||||||| ||||||||||    
T  32360 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagt 32458  T
Q  352 cgaatcttggatcggataccgagttttc 379  Q
    ||| ||||| ||||||||||||||||||    
T  32459 cgattcttg-atcggataccgagttttc 32485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 97503 - 97366
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  97503 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcc 97405  T
Q  341 -ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
     |||| ||||||||  | ||||| |||||||||||||||    
T  97404 tctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 66863 - 66951
Alignment:
Q  293 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 29279 - 29143
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc- 341  Q
    ||||||||| | ||| ||||| ||||||| || ||||||||||||| |||||||||||||| |||||| ||||  ||  ||| | ||||||||||||||     
T  29279 gttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatggacccccgcaaatggacagtgggattggtcccc 29180  T
Q  342 tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    || ||||||||    ||||||||||||||||||||||    
T  29179 tcagattagtcagtccttggatcggataccgagtttt 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 15063 - 15178
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcggattagt 351  Q
    ||||||| ||||||||||||  |||||||| |||| ||| ||||||||||||||||||  |||| || |||||||| |||||||||| ||||||||||||    
T  15063 ctggtgctaatttcggtgggttaagtccatccagagctt-gctctggctttaaatgggccccccgcaagtgggcgg-gggattggtctcctcggattagt 15160  T
Q  352 cgaatcttggatcggata 369  Q
    | | ||||||||||||||    
T  15161 caattcttggatcggata 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 13181 - 13047
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 340  Q
    ||||||||| | ||||||||||||||||||||  ||||||||||||| ||| |||    ||||||| |||  |||| || |||| ||||||||||| |||    
T  13181 gttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gcta---ctttaaacggggcccccgcaagtggacggtgggattgatcc 13086  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    | || ||||||| || |||||||||||||||||||||||    
T  13085 cctcagattagttgattcttggatcggataccgagtttt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 8509 - 8451
Alignment:
Q  321 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  8509 gtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 8544 - 8508
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagt 280  Q
    |||||||| || |||||||||||||||||||||||||    
T  8544 gttcgattatctctggtgccaatttcggtgggcaagt 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 2529 - 2426
Alignment:
Q  277 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccga 373  Q
    ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| ||||||||||||||    |||| ||||||||||||    
T  2529 aagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccga 2431  T
Q  374 gtttt 378  Q
    |||||    
T  2430 gtttt 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 20294 - 20418
Alignment:
Q  256 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 352  Q
    ||||||||||||||  ||||| ||||||||||| | ||| |||||||||||||| |||  |||| || |||||||||   |||| || ||||||||||||    
T  20294 ctggtgccaatttcaatgggctaagtccatacatagctt-gctctggctttaaacgggacccccgcaagtgggcggtaaaattgatctctcggattagtc 20392  T
Q  353 gaatcttggatcggataccgagtttt 378  Q
     | ||||||| |||||||||||||||    
T  20393 aattcttggaccggataccgagtttt 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 41781 - 41644
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 340  Q
    ||||||||| | || || ||||||||| || || ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||  ||||||||||||    
T  41781 gttcgattccctcttgttccaatttcgttgtgctaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcaatgggattggtcc 41683  T
Q  341 c-tcggattagtcgaatcttggatcggataccgagttttc 379  Q
    | ||||||||||||| |||| |||||||||| ||||||||    
T  41682 cctcggattagtcgattctt-gatcggatacagagttttc 41644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 123134 - 123066
Alignment:
Q  310 gggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 378  Q
    |||||||||| ||| | ||||||||||||||| |||||||| |||| |||||||||||||||| ||||||    
T  123134 gggccccacaagtgtgtggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 123188 - 123146
Alignment:
Q  244 gttcgattctccctggtgccaatttcggtgggcaagtccatac 286  Q
    ||||||||| | ||| |||||||||||||||||||||||||||    
T  123188 gttcgattccctctgttgccaatttcggtgggcaagtccatac 123146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 76 - 1
Alignment:
Q  263 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 336  Q
    |||||||| ||||| |||||||||||||  |||||||| |||||||| |||  ||||||| ||||||||||||||||    
T  76 caatttcgatgggctaagtccatacagag-tttgctctagctttaaacggggcccccacatgtgggcggtgggattg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University