View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16457_high_4 (Length: 228)
Name: NF16457_high_4
Description: NF16457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16457_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 20839758 - 20839813
Alignment:
| Q |
31 |
gagtaacttggaccaaatttggtttacacaattacccaaaaactttacattatgga |
86 |
Q |
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| T |
20839758 |
gagtaacttggaccaaatttggtttacataattacccaaaaactttacattatgga |
20839813 |
T |
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Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 17365558 - 17365599
Alignment:
| Q |
34 |
taacttggaccaaatttggtttacacaattacccaaaaactt |
75 |
Q |
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| T |
17365558 |
taacttggaccaagtttggtttacacaattacccaaaaactt |
17365599 |
T |
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