View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16458_high_4 (Length: 385)

Name: NF16458_high_4
Description: NF16458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16458_high_4
NF16458_high_4
[»] chr1 (49 HSPs)
chr1 (1-364)||(29333387-29333752)
chr1 (192-356)||(37156864-37157026)
chr1 (196-351)||(51162252-51162407)
chr1 (190-355)||(15631883-15632048)
chr1 (196-324)||(16708809-16708937)
chr1 (267-356)||(37148112-37148201)
chr1 (193-357)||(3116007-3116170)
chr1 (195-355)||(17628372-17628531)
chr1 (246-357)||(20169242-20169352)
chr1 (193-357)||(5243349-5243512)
chr1 (195-323)||(34265580-34265708)
chr1 (195-344)||(9572731-9572881)
chr1 (195-357)||(32497219-32497380)
chr1 (195-319)||(41196657-41196781)
chr1 (196-354)||(26435123-26435280)
chr1 (195-324)||(4068125-4068254)
chr1 (195-324)||(48819309-48819438)
chr1 (195-357)||(42363579-42363737)
chr1 (193-324)||(37329357-37329488)
chr1 (195-357)||(15235108-15235269)
chr1 (195-277)||(37712124-37712206)
chr1 (203-328)||(3069809-3069934)
chr1 (195-356)||(15791362-15791522)
chr1 (195-324)||(22593354-22593483)
chr1 (196-325)||(26988157-26988286)
chr1 (195-323)||(6337703-6337831)
chr1 (201-324)||(10082260-10082384)
chr1 (241-357)||(49971228-49971344)
chr1 (190-357)||(12256584-12256750)
chr1 (241-356)||(18327502-18327617)
chr1 (241-356)||(19284874-19284991)
chr1 (245-312)||(46263420-46263487)
chr1 (241-303)||(45179029-45179090)
chr1 (195-356)||(17814169-17814329)
chr1 (244-356)||(26946100-26946213)
chr1 (190-356)||(35275840-35276007)
chr1 (202-322)||(15515301-15515421)
chr1 (196-324)||(16888914-16889041)
chr1 (243-323)||(19220185-19220264)
chr1 (241-324)||(26542983-26543066)
chr1 (290-356)||(16225487-16225553)
chr1 (241-323)||(36259284-36259366)
chr1 (241-355)||(42591361-42591475)
chr1 (195-324)||(13038957-13039086)
chr1 (287-324)||(41003397-41003434)
chr1 (195-307)||(10365198-10365309)
chr1 (241-357)||(28122594-28122709)
chr1 (245-357)||(35282591-35282701)
chr1 (196-343)||(49738249-49738396)
[»] chr4 (37 HSPs)
chr4 (197-359)||(2702664-2702826)
chr4 (200-328)||(22397257-22397385)
chr4 (241-328)||(43983375-43983462)
chr4 (193-357)||(46175924-46176087)
chr4 (241-356)||(15184525-15184639)
chr4 (193-356)||(47202804-47202966)
chr4 (241-358)||(27368145-27368261)
chr4 (192-356)||(52700487-52700651)
chr4 (195-359)||(29877614-29877778)
chr4 (195-324)||(7148782-7148911)
chr4 (215-324)||(26206321-26206430)
chr4 (195-344)||(38345769-38345917)
chr4 (196-324)||(4603280-4603407)
chr4 (244-356)||(19725271-19725383)
chr4 (195-359)||(23297413-23297574)
chr4 (241-323)||(35010222-35010304)
chr4 (195-356)||(35405663-35405822)
chr4 (195-324)||(48591371-48591500)
chr4 (215-324)||(55638048-55638157)
chr4 (195-307)||(17222856-17222968)
chr4 (284-356)||(23284812-23284883)
chr4 (241-357)||(42617223-42617338)
chr4 (195-355)||(12495591-12495753)
chr4 (246-324)||(39932752-39932830)
chr4 (244-357)||(22303073-22303185)
chr4 (195-304)||(41228933-41229042)
chr4 (259-324)||(43415300-43415365)
chr4 (202-354)||(18424232-18424383)
chr4 (268-359)||(10796361-10796452)
chr4 (294-357)||(19414106-19414169)
chr4 (265-359)||(43699500-43699594)
chr4 (259-344)||(212959-213043)
chr4 (195-324)||(36740914-36741043)
chr4 (196-324)||(896980-897108)
chr4 (244-324)||(2141651-2141731)
chr4 (296-356)||(10794957-10795017)
chr4 (259-302)||(36298363-36298407)
[»] chr5 (46 HSPs)
chr5 (195-356)||(15413970-15414131)
chr5 (183-355)||(40415907-40416079)
chr5 (195-359)||(42851997-42852160)
chr5 (183-328)||(39990582-39990727)
chr5 (215-357)||(43318980-43319122)
chr5 (182-307)||(28357379-28357504)
chr5 (195-328)||(40152823-40152956)
chr5 (193-324)||(28625490-28625621)
chr5 (195-360)||(29922136-29922301)
chr5 (242-357)||(15122522-15122636)
chr5 (241-356)||(26002975-26003090)
chr5 (195-344)||(24030205-24030353)
chr5 (195-355)||(4728825-4728983)
chr5 (265-357)||(33757065-33757156)
chr5 (245-355)||(6025982-6026091)
chr5 (215-307)||(36206060-36206153)
chr5 (259-347)||(2502730-2502818)
chr5 (293-357)||(5203478-5203542)
chr5 (284-356)||(25332274-25332346)
chr5 (196-324)||(29418700-29418828)
chr5 (195-307)||(29659087-29659199)
chr5 (265-344)||(10537236-10537315)
chr5 (241-312)||(42808873-42808944)
chr5 (198-324)||(13060552-13060678)
chr5 (267-357)||(15709911-15710000)
chr5 (195-324)||(17657252-17657381)
chr5 (267-355)||(15363991-15364079)
chr5 (215-307)||(23087746-23087838)
chr5 (289-357)||(33667433-33667501)
chr5 (201-344)||(11991295-11991437)
chr5 (192-235)||(15364100-15364143)
chr5 (261-356)||(17128256-17128351)
chr5 (261-344)||(22573643-22573726)
chr5 (245-328)||(38461279-38461362)
chr5 (192-271)||(42478889-42478968)
chr5 (288-358)||(341966-342036)
chr5 (190-304)||(7364251-7364365)
chr5 (267-357)||(17668377-17668466)
chr5 (195-357)||(20458505-20458666)
chr5 (190-304)||(41419531-41419645)
chr5 (201-254)||(11163235-11163288)
chr5 (246-318)||(18602618-18602691)
chr5 (196-277)||(41059737-41059818)
chr5 (242-308)||(6008234-6008297)
chr5 (244-324)||(7984115-7984195)
chr5 (289-356)||(35078711-35078777)
[»] chr8 (45 HSPs)
chr8 (195-359)||(30973964-30974128)
chr8 (186-359)||(36907582-36907759)
chr8 (195-324)||(2563368-2563497)
chr8 (195-356)||(19925336-19925496)
chr8 (192-359)||(14262301-14262468)
chr8 (195-324)||(2669658-2669787)
chr8 (216-356)||(43577199-43577339)
chr8 (215-308)||(9782209-9782302)
chr8 (195-357)||(12607057-12607218)
chr8 (195-324)||(1184793-1184922)
chr8 (241-355)||(19925536-19925650)
chr8 (241-356)||(42102085-42102199)
chr8 (195-357)||(42363264-42363425)
chr8 (196-356)||(32131418-32131578)
chr8 (193-324)||(11988207-11988337)
chr8 (195-322)||(31079113-31079240)
chr8 (195-357)||(37410860-37411021)
chr8 (195-324)||(32975697-32975826)
chr8 (199-359)||(14942399-14942559)
chr8 (256-324)||(23412744-23412812)
chr8 (269-356)||(2019670-2019757)
chr8 (266-324)||(28280719-28280777)
chr8 (195-357)||(38338798-38338959)
chr8 (195-324)||(9131075-9131204)
chr8 (241-357)||(32751115-32751231)
chr8 (245-357)||(38195464-38195575)
chr8 (196-323)||(218202-218327)
chr8 (196-323)||(694762-694887)
chr8 (196-323)||(698971-699096)
chr8 (196-323)||(731825-731950)
chr8 (196-323)||(855721-855846)
chr8 (245-344)||(19327857-19327955)
chr8 (194-304)||(14724911-14725021)
chr8 (196-323)||(16926676-16926807)
chr8 (195-277)||(24350466-24350548)
chr8 (241-307)||(24866944-24867010)
chr8 (266-356)||(42666976-42667065)
chr8 (282-323)||(402122-402163)
chr8 (242-307)||(35168435-35168500)
chr8 (190-254)||(9130959-9131023)
chr8 (264-344)||(16706116-16706196)
chr8 (284-328)||(29218289-29218333)
chr8 (245-344)||(31459036-31459136)
chr8 (284-356)||(37966227-37966299)
chr8 (196-304)||(41145344-41145451)
[»] chr7 (33 HSPs)
chr7 (195-359)||(35809065-35809229)
chr7 (199-359)||(22319243-22319402)
chr7 (215-356)||(22575564-22575705)
chr7 (195-357)||(22032739-22032901)
chr7 (195-324)||(29378655-29378784)
chr7 (195-357)||(28004561-28004722)
chr7 (195-324)||(47862732-47862860)
chr7 (195-357)||(47654361-47654523)
chr7 (195-344)||(44613420-44613569)
chr7 (289-357)||(24371447-24371515)
chr7 (193-358)||(20888549-20888715)
chr7 (198-307)||(14691249-14691358)
chr7 (195-320)||(16932877-16933001)
chr7 (195-320)||(16938260-16938384)
chr7 (244-324)||(14675956-14676035)
chr7 (244-355)||(1312093-1312203)
chr7 (195-321)||(991513-991638)
chr7 (195-357)||(16958793-16958954)
chr7 (198-356)||(38372536-38372694)
chr7 (215-290)||(18251491-18251565)
chr7 (266-328)||(7098118-7098180)
chr7 (190-296)||(12473391-12473497)
chr7 (313-359)||(18837197-18837243)
chr7 (245-319)||(21027510-21027584)
chr7 (195-357)||(23137110-23137271)
chr7 (195-328)||(30094676-30094811)
chr7 (196-324)||(41094228-41094352)
chr7 (271-324)||(21249166-21249219)
chr7 (241-357)||(35246649-35246762)
chr7 (293-357)||(18260890-18260954)
chr7 (238-358)||(23119910-23120029)
chr7 (196-324)||(30181560-30181688)
chr7 (245-304)||(47582561-47582620)
[»] chr3 (36 HSPs)
chr3 (195-359)||(4974286-4974450)
chr3 (195-324)||(38524098-38524227)
chr3 (195-316)||(20174887-20175008)
chr3 (193-328)||(45049319-45049454)
chr3 (174-291)||(48816758-48816875)
chr3 (196-353)||(30383749-30383903)
chr3 (182-356)||(1516032-1516205)
chr3 (241-356)||(29614172-29614286)
chr3 (193-324)||(42956124-42956255)
chr3 (259-357)||(10448751-10448849)
chr3 (245-323)||(37456431-37456508)
chr3 (261-338)||(51662800-51662877)
chr3 (241-357)||(3645280-3645395)
chr3 (195-307)||(45331242-45331354)
chr3 (250-329)||(30473145-30473224)
chr3 (195-310)||(37243490-37243605)
chr3 (215-357)||(28741181-28741323)
chr3 (195-277)||(40240524-40240606)
chr3 (241-323)||(43971840-43971922)
chr3 (243-357)||(4257295-4257410)
chr3 (284-357)||(24841423-24841496)
chr3 (241-357)||(20894480-20894595)
chr3 (193-328)||(47403707-47403843)
chr3 (183-297)||(19307978-19308091)
chr3 (199-356)||(22809144-22809302)
chr3 (195-344)||(40581023-40581173)
chr3 (259-356)||(7292659-7292755)
chr3 (271-356)||(29830793-29830878)
chr3 (195-307)||(53787699-53787811)
chr3 (241-356)||(29270339-29270454)
chr3 (243-310)||(43376719-43376786)
chr3 (241-344)||(53218033-53218136)
chr3 (290-356)||(30499944-30500010)
chr3 (195-232)||(3845956-3845993)
chr3 (284-357)||(36266221-36266294)
chr3 (247-359)||(2086690-2086802)
[»] scaffold1088 (1 HSPs)
scaffold1088 (230-356)||(1272-1398)
[»] chr2 (27 HSPs)
chr2 (200-359)||(24438994-24439153)
chr2 (196-324)||(12238434-12238559)
chr2 (193-343)||(21788448-21788598)
chr2 (195-304)||(16108069-16108178)
chr2 (259-357)||(27881008-27881106)
chr2 (255-344)||(34913397-34913486)
chr2 (197-271)||(12950064-12950138)
chr2 (195-359)||(4026901-4027064)
chr2 (271-351)||(8441456-8441536)
chr2 (195-357)||(32366127-32366288)
chr2 (261-323)||(43796941-43797003)
chr2 (195-355)||(32521993-32522152)
chr2 (265-356)||(2757088-2757177)
chr2 (190-307)||(5516102-5516220)
chr2 (195-324)||(33321259-33321388)
chr2 (195-356)||(38216001-38216158)
chr2 (289-357)||(40301329-40301397)
chr2 (190-304)||(42064881-42064995)
chr2 (195-296)||(23956211-23956312)
chr2 (195-316)||(36501462-36501583)
chr2 (216-357)||(38471759-38471900)
chr2 (200-324)||(29774755-29774879)
chr2 (271-359)||(35515503-35515591)
chr2 (296-355)||(16108511-16108570)
chr2 (245-328)||(43787800-43787883)
chr2 (195-277)||(8832514-8832596)
chr2 (195-339)||(25836660-25836803)
[»] scaffold0004 (1 HSPs)
scaffold0004 (199-322)||(227718-227842)
[»] chr6 (31 HSPs)
chr6 (195-359)||(8010992-8011157)
chr6 (205-356)||(10619207-10619360)
chr6 (202-357)||(10184284-10184438)
chr6 (193-356)||(32615360-32615522)
chr6 (196-350)||(21609997-21610151)
chr6 (241-357)||(4808549-4808664)
chr6 (195-324)||(2034176-2034305)
chr6 (195-323)||(32165208-32165335)
chr6 (195-353)||(21891285-21891443)
chr6 (245-307)||(34413346-34413408)
chr6 (195-344)||(29623425-29623573)
chr6 (241-317)||(15054578-15054654)
chr6 (193-324)||(2255744-2255875)
chr6 (241-324)||(22816578-22816661)
chr6 (195-357)||(1468153-1468313)
chr6 (195-333)||(2027123-2027261)
chr6 (259-357)||(6632636-6632734)
chr6 (196-324)||(10755231-10755356)
chr6 (245-355)||(34223522-34223632)
chr6 (195-304)||(10874014-10874123)
chr6 (196-307)||(16589778-16589886)
chr6 (196-307)||(16605494-16605602)
chr6 (241-324)||(4272392-4272475)
chr6 (190-324)||(10054391-10054523)
chr6 (256-319)||(10730249-10730312)
chr6 (241-356)||(17914924-17915038)
chr6 (241-328)||(29052339-29052426)
chr6 (267-357)||(9894743-9894833)
chr6 (268-358)||(30533957-30534046)
chr6 (195-328)||(23239253-23239386)
chr6 (193-277)||(32675834-32675918)
[»] scaffold0332 (1 HSPs)
scaffold0332 (194-328)||(14692-14826)
[»] scaffold0512 (1 HSPs)
scaffold0512 (195-323)||(4076-4203)
[»] scaffold0157 (1 HSPs)
scaffold0157 (195-355)||(24724-24886)
[»] scaffold0012 (1 HSPs)
scaffold0012 (241-356)||(178478-178594)
[»] scaffold0006 (1 HSPs)
scaffold0006 (249-324)||(278993-279067)
[»] scaffold0041 (1 HSPs)
scaffold0041 (196-324)||(108944-109068)
[»] scaffold0048 (1 HSPs)
scaffold0048 (289-353)||(59249-59313)


Alignment Details
Target: chr1 (Bit Score: 289; Significance: 1e-162; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 29333752 - 29333387
Alignment:
Q  1 gtgataaggaagtagagggtttgattcttgctcgcactataatgctaacaattattgacaatattaacgttattcgcttgttctccctaacnnnnnnntt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       ||    
T  29333752 gtgataaggaagtagagggtttgatttttgctcgcactataatgctaacaattattgacaatattaacgttgatcgcttgttctccctaacaaaaaaatt 29333653  T
Q  101 gatcttttattgtcccataagtacatgttattggtagttgcatggatgtttgacnnnnnnn--ggtatttaatatttagggcacgtttggattgaactta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  29333652 gatcttttattgtcccataagtacatgttattggtagttgcatggatgtttgacaagaaaaaaggtatttaatatttagggcacgtttggattgaactta 29333553  T
Q  199 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataa 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  29333552 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatattcataagttgttttttcataagctatcttaacaaacttataa 29333453  T
Q  299 ataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagccatcaaa 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29333452 ataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagccatcaaa 29333387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 192 - 356
Target Start/End: Original strand, 37156864 - 37157026
Alignment:
Q  192 gaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaa 291  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||| | ||||||||||||||| |||  ||  |||||||||| |||  |||||| |    
T  37156864 gaacttatgcaaataattaagcttttatgttaattcataagatcttactagcgaaaattgtatattcataggtt--tttttcataaactaccttaacata 37156961  T
Q  292 cttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||||||| | |||||||||    
T  37156962 cttataaataatacattaatgcttatttatttgcataagctgctttgcataagctttaaaataag 37157026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 196 - 351
Target Start/End: Complemental strand, 51162407 - 51162252
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||||||| | |||||||||||| ||| |||| ||  ||||||||||||||||| |||| |||||||||||||| |||  |||||||||||     
T  51162407 ttatgcaaataattaaacttttatgttaatttataagatcttattaacgaaaattgtatattcataagttgttttttcataaactaccttaacaaacttg 51162308  T
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaa 351  Q
    |||||||||||||||| |||||||||||| ||| ||| ||||||||||| ||||||    
T  51162307 taaataatacattaatgcttatttatttgcataagctactttgcataagctctaaa 51162252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 355
Target Start/End: Complemental strand, 15632048 - 15631883
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| |||||| |||||| ||||  ||||| |||||| ||||| ||  || |||||||||||||| || |||||  ||||||||||||  ||  ||||||    
T  15632048 ttgagcttatgtaaataaataagtttttattttaatttatatgctctcactaacgaaaattgtattttcataaacagttttttcataaaatacattaaca 15631949  T
Q  290 aacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    |||||||||||||||||| || ||||||||||||||||| | || |||| ||||| ||||||||||    
T  15631948 aacttataaataatacataaaaacttatttatttgtataagttgttttgtataagctctaaaataa 15631883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 16708937 - 16708809
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| |||   |||||||||||||||| |||| ||| || |||||||||||||| ||||||||||||||||||| | |  |||||| | |||    
T  16708937 ttatgcaaataaataaatttttatgttaattcataagatcttactaatgaaaattgtatattcataaattgttttttcataaacaaccttaacagattta 16708838  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    |||||| |||||||||| || ||||||||    
T  16708837 taaatagtacattaatatttctttatttg 16708809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 37148112 - 37148201
Alignment:
Q  267 ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||| |||  |||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| | |||||||||    
T  37148112 ttttttcataaactaccttaacatacttataaataatacattaatgcttatttatttgcataagctgctttgcataagctttaaaataag 37148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 357
Target Start/End: Original strand, 3116007 - 3116170
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| ||||| ||||| |||||| ||| |||| ||| |||||||||||||| || |||||| |||||||||||| |||  |||| ||||    
T  3116007 aacttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaac 3116105  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||| || |||| || | ||||||||||| ||| |||| |||  ||||| | ||||||||||    
T  3116106 ttataaacaaaacataaaaatttatttatttgcataagctgttttatataagctataaaataagc 3116170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 17628372 - 17628531
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| | | | ||  || |||||||||||||| || |||||  |||||||||||| |||  |||| ||||||    
T  17628372 cttatgtaaataaataagcttttattttaatttagaagctctcactaacgaaaattgtatcttcataaacggttttttcataaactaccttaa-aaactt 17628470  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    ||||||||||||| || ||||||||||||||||| |||| |||  ||||| ||||||||||    
T  17628471 ataaataatacataaaaacttatttatttgtataagctgttttatataagctctaaaataa 17628531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Complemental strand, 20169352 - 20169242
Alignment:
Q  246 aaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagt 345  Q
    |||||||||||||||||| ||||||||||||| |||| || | ||||||||||||||||||| ||  |||||||||||| ||| |||| ||| ||||||     
T  20169352 aaattgtatatttataaactgttttttcataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataagctgtttttcataagc 20169253  T
Q  346 tctaaaataagc 357  Q
    || |||||||||    
T  20169252 tc-aaaataagc 20169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 357
Target Start/End: Original strand, 5243349 - 5243512
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacg-aacgaaaattgtatatttataaattgttttttcataagctattttaacaaa 291  Q
    |||||||| |||||| ||||| ||||| |||||| ||||| || | || |||||||||||||| || ||||| | ||||||||||| |||  |||| |||    
T  5243349 aacttatgtaaataaataagcttttattttaatttatatgctc-tccgtaacgaaaattgtatcttcataaactattttttcataaactaccttaa-aaa 5243446  T
Q  292 cttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||||||  || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  5243447 cttataaataatacacaaaaacttatttatttgcataagctgttttatataagctctaaaataagc 5243512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 34265708 - 34265580
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||| ||||||| ||||  || ||||||||| ||| |||| ||  ||| ||| |||| |||| |||| |||||||||||||| |||  |||||||| ||    
T  34265708 cttatacaaataaataagttttaatgttaatttataagatcttattaacaaaatttgtctattcataagttgttttttcataaactaccttaacaaattt 34265609  T
Q  295 ataaataatacattaatacttatttattt 323  Q
    |||||||||||||||||| ||||||||||    
T  34265608 ataaataatacattaatatttatttattt 34265580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 9572731 - 9572881
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || ||| |||| | ||| || ||||||||||||||||||| |||  |||||||||||    
T  9572731 cttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattgttttttcataaactaccttaacaaactt 9572830  T
Q  295 ataaataatacattaata-cttatttatttgtatatgctgctttgcataag 344  Q
    || ||||||| || || | |||||||||||| | | |||| ||||||||||    
T  9572831 atgaataataaataaaaagcttatttatttgcaaaagctgttttgcataag 9572881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 32497219 - 32497380
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||| | ||||| |||||| ||| | ||  || ||||||||||||||  | ||||| ||||||||||||| |||  |||| ||||||    
T  32497219 cttatgtaaataaataaacttttattttaatttataagctctcactaacgaaaattgtatcctcataaactgttttttcataaactaccttaa-aaactt 32497317  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| ||| |||| |||  ||||| || |||||||||    
T  32497318 ataaataatacataaaaacttatttatttgcataagctgttttatataagctccaaaataagc 32497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 319
Target Start/End: Original strand, 41196657 - 41196781
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| |||||||||||||||||||| | | ||  || ||| |||||||||| || ||||  ||||||||||||| |||  || |||| |||    
T  41196657 cttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactacattgacaagctt 41196756  T
Q  295 ataaataatacattaatacttattt 319  Q
    || |||||||||| || ||||||||    
T  41196757 atgaataatacataaaaacttattt 41196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 26435123 - 26435280
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||  | | |||||||||||||| | ||  |  |||||||| ||||| || |||||  |||||||||||| ||| ||| |||||||||    
T  26435123 ttatgcaaataaatagacttatatgttaattcataagttctcagtaacgaaaaatgtatcttcataaacagttttttcataaactactttgacaaactta 26435222  T
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaata 354  Q
     |||||||||| ||| ||||||||||||| ||| |||| |||| ||||| || ||||||    
T  26435223 aaaataataca-taaaacttatttatttgcataagctgttttgtataagctcaaaaata 26435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 4068254 - 4068125
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | ||||| |||||||||| | ||  || ||||||||| |||| || |||| |||||||||||||| |||  || |||| |||    
T  4068254 cttatgcaaataaataaacttttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagctt 4068155  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || |||||||||| ||  ||||||||||||    
T  4068154 atgaataatacataaaagcttatttatttg 4068125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 48819438 - 48819309
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||| | ||  || ||| |||| ||||| || ||||  ||||||||||||| |||  || |||| |||    
T  48819438 cttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaactaccttgacaagctt 48819339  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || |||||||||||||  || |||||||||    
T  48819338 atgaataatacattaaagctcatttatttg 48819309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 42363737 - 42363579
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| |||| |||||| ||||||| || | ||  |  ||||||||| |||  || || || ||||||||||| | || | ||||||| |||    
T  42363737 cttatgcaaataaataagtctttatcttaattcctaagttctca--aacgaaaatcgtaccttcatcaactgttttttcattaactttattaacaagctt 42363640  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||  ||||||||||||| ||||  ||||||||| ||||||||||||    
T  42363639 ataaataatacataaagac--atttatttgtataagctgtcttgcataagctctaaaataagc 42363579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 37329357 - 37329488
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    ||||||||||||||| ||||| |||||||||||| ||| | ||  || |||||||||||||| || ||||  ||||||||||||| |||  || ||||      
T  37329357 aacttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagt 37329456  T
Q  293 ttataaataatacattaatacttatttatttg 324  Q
    |||| |||||||||| ||  || |||||||||    
T  37329457 ttatgaataatacataaaagctcatttatttg 37329488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 15235108 - 15235269
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  ||||| |||||| ||| | || ||| ||||||||| || | || |||||  |||||||||||| || | |||| ||||||    
T  15235108 cttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataaaccgttttttcataaactgtcttaa-aaactt 15235206  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||  ||| |||  |||  || |||||||||||||||    
T  15235207 ataaataatacataaaaacttatttatttacataagctattttatattagttctaaaataagc 15235269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 37712206 - 37712124
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    ||||||||||||| ||| | |||||||||||||||| | || ||| ||||||| |||||| || |||| ||||||||||||||    
T  37712206 cttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcataa 37712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 3069809 - 3069934
Alignment:
Q  203 aataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataa 302  Q
    ||||| ||||| |||||||||||||||| | ||  || |  ||||||||||| || ||||  ||||||||||||| |||  || |||| ||||| |||||    
T  3069809 aataaataagcttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 3069908  T
Q  303 tacattaatacttatttatttgtata 328  Q
    ||||||||  |||| |||||||||||    
T  3069909 tacattaaagcttacttatttgtata 3069934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 356
Target Start/End: Complemental strand, 15791522 - 15791362
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| ||| | ||  |  |||||||||||||| || || ||   ||||||||||| |||  |||| ||||||    
T  15791522 cttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaattgtatcttcattaacgattttttcataaactaccttaa-aaactt 15791424  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||| || ||||||||||||  ||| |||| |||  ||||| |||||||||||    
T  15791423 ataaataatacataaaaacttatttatttacataagctgttttatataagctctaaaataag 15791362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 22593354 - 22593483
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||| ||| | ||  || ||| |||||||||| |||||||| || |||||| ||| ||   || |||| |||    
T  22593354 cttatgcaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatctttataaagtgatttttcgtaaactgcatttacaagctt 22593453  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || |||||||||| || | |||||||||||    
T  22593454 atgaataatacataaaaatttatttatttg 22593483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 26988286 - 26988157
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| | ||| |||||||||||||||| | |  ||| ||||| |||||||| || ||||  ||||||||||||| |||  || |||| ||||    
T  26988286 ttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcataaactaccttgacaagctta 26988187  T
Q  296 taaataatacattaatacttatttatttgt 325  Q
    | ||||| |||| ||  |||||||||||||    
T  26988186 tgaataagacataaaagcttatttatttgt 26988157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 6337703 - 6337831
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||||||| || ||||| |||||||||||||||| | ||   | ||| |||||||||| || ||||  ||||||||||||| |||  || |||| |||    
T  6337703 cttatgcaaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctt 6337802  T
Q  295 ataaataatacattaatacttatttattt 323  Q
    || |||||||||| ||  |||||||||||    
T  6337803 atgaataatacataaaagcttatttattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 10082384 - 10082260
Alignment:
Q  201 caaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgtttttt-cataagctattttaacaaacttataaa 299  Q
    ||||||| ||||| ||||| |||||||||| | ||  |||||| |||| ||||| || |||| ||||||||| ||||| |||  || |||||||||| ||    
T  10082384 caaataaataagcttttatattaattcataagttctcacgaaccaaaaatgtattttcataagttgtttttttcataaactaccttgacaaacttatcaa 10082285  T
Q  300 taatacattaatacttatttatttg 324  Q
    ||| |||| || |||||||||||||    
T  10082284 taacacataaaaacttatttatttg 10082260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 49971344 - 49971228
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| ||  |||  ||||||||||||| |||  ||||||| ||||||||||||| || ||    |||||||||| ||| | || ||||||    
T  49971344 aacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataagttgttttgca 49971245  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  49971244 taagctctaaaataagc 49971228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 357
Target Start/End: Complemental strand, 12256750 - 12256584
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| ||||| ||||||| |||   ||||| |||||||||| | || ||| |||||||||||||  || ||||||||| ||||||||| |||  | ||||    
T  12256750 ttgagcttatacaaataaataaatttttattttaattcataagttcttactaacgaaaattgtaccttcataaattgt-ttttcataaactacatcaaca 12256652  T
Q  290 aacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    | ||||||||||||| || ||  | || ||||||  ||| | || |||||||||| ||||||||||||    
T  12256651 atcttataaataatatataaaagcataattatttacataagttgttttgcataagctctaaaataagc 12256584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 18327617 - 18327502
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||| | || ||||  ||||||||||||| |||| || |||| ||||| | |||||||| ||  |||||||||||| ||| |||| |||| |    
T  18327617 aacgaaaattgtgtgttcataagctgttttttcataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataagctgttttgaa 18327518  T
Q  341 taagttctaaaataag 356  Q
    ||| ||| ||||||||    
T  18327517 taaattccaaaataag 18327502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 19284991 - 19284874
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttc--ataagctattttaacaaacttataaataatacattaata-cttatttatttgtatatgctgcttt 337  Q
    |||||||||||||| || ||||| ||||||||   ||||  ||| |||||||||||||||||||||||| |||| ||||||||||| |||| |||| |||    
T  19284991 aacgaaaattgtatcttcataaactgtttttttttataaaatatcttaacaaacttataaataatacat-aatagcttatttatttatataagctgtttt 19284893  T
Q  338 gcataagttctaaaataag 356  Q
      ||||| |||||| ||||    
T  19284892 atataagctctaaagtaag 19284874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 46263487 - 46263420
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaata 312  Q
    ||||||||||||| |||| ||||||||||||||  ||   ||||||| ||||||||||||||||||||    
T  46263487 aaaattgtatattcataagttgttttttcataaattaacctaacaaatttataaataatacattaata 46263420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 45179029 - 45179090
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataat 303  Q
    |||||||||||||||||||||| || ||||||||||| ||| ||||| ||| |||||||||||    
T  45179029 aacgaaaattgtatatttataagttattttttcataaacta-tttaataaatttataaataat 45179090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 356
Target Start/End: Complemental strand, 17814329 - 17814169
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||  ||| | ||  || |||||||||||||| || ||||    ||||||||||| |||  |||| ||||||    
T  17814329 cttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataacccattttttcataaactaccttaa-aaactt 17814231  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||| || |  |||||||||| ||| |||| |||  ||||| |||||||||||    
T  17814230 ataaataatacataaaaatgtatttatttgcataagctgttttatataagctctaaaataag 17814169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 26946100 - 26946213
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaata-cttatttatttgtatatgctgctttgcata 342  Q
    ||||||||||| || |||| |||||||||||||| |||  ||||||| ||||| ||||| |||| || | |||||||||||  ||| || | ||||||||    
T  26946100 gaaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaataacacataaaaagcttatttatttacataagccgttttgcata 26946199  T
Q  343 agttctaaaataag 356  Q
    || || ||||||||    
T  26946200 agctcaaaaataag 26946213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 356
Target Start/End: Original strand, 35275840 - 35276007
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| |||||| |||||| ||| | ||||| |||||| |||  |||  || |||||||||||||||||  ||||  | |||||||||| |||  |||| |    
T  35275840 ttgagcttatgtaaataaataaacttttattttaatttataaaatctcactaacgaaaattgtatattcctaaacaggtttttcataaactaccttaa-a 35275938  T
Q  290 aacttataaataatacattaatac--ttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    | |||||||||||||||| || |   ||||||||||||||| |||| |||  ||||| |||||||||||    
T  35275939 atcttataaataatacataaaaaaatttatttatttgtataagctgttttatataagctctaaaataag 35276007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 322
Target Start/End: Original strand, 15515301 - 15515421
Alignment:
Q  202 aaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaata 301  Q
    |||||| ||||| || ||||||||||||| | ||  || |||||||||||||| || ||||  | ||||||||||| |||  || |||| ||||| ||||    
T  15515301 aaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaata 15515400  T
Q  302 atacattaatacttatttatt 322  Q
    |||||| ||  ||||||||||    
T  15515401 atacataaaagcttatttatt 15515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 16888914 - 16889041
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||| |||||||||| |||||   ||  || || ||||||||||| || ||||  ||||||||||||| |||  || |||| ||||    
T  16888914 ttatgcaaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcataaactacctt-acaagctta 16889012  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | |||||||||| ||  ||||||||||||    
T  16889013 tgaataatacataaaagcttatttatttg 16889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 19220264 - 19220185
Alignment:
Q  243 cgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    ||||||||| || || |||||| |||||||||||| |||  |||| |||| |||||||||||||| || ||||||||||||    
T  19220264 cgaaaattgcatcttcataaatagttttttcataaactaccttaa-aaacctataaataatacataaaaacttatttattt 19220185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 26543066 - 26542983
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||||||||||||  ||  ||| |||||||||||||| |||  |||||||||||||| ||||||||| ||  | ||||||||||    
T  26543066 aacgaaaattgtactttcttaagttgttttttcataaactacattaacaaacttatatataatacataaaagcatatttatttg 26542983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 16225553 - 16225487
Alignment:
Q  290 aacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||| |||||||| || ||||||||||||  |||  ||| |||||||||| |||||||||||    
T  16225553 aacttataattaatacataaaaacttatttatttacataaactgttttgcataagctctaaaataag 16225487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 36259284 - 36259366
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    |||||||||||||| |||||||| ||||||||||||| |||   | ||||| |||  |||||||||| || | ||||||||||    
T  36259284 aacgaaaattgtatgtttataaactgttttttcataaactacacttacaaagttaagaataatacataaaaatttatttattt 36259366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 42591475 - 42591361
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||| ||||| || ||||| | |||||||||||  ||  |||||||||||||||||||||  | ||  |||||||| ||||| | |||| |||| |    
T  42591475 aacgaaaagtgtatcttcataaactattttttcataaaataccttaacaaacttataaataatatgtaaaagcttatttacttgtacaagctgttttgta 42591376  T
Q  341 taagttctaaaataa 355  Q
    |||| | ||||||||    
T  42591375 taagctttaaaataa 42591361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 13039086 - 13038957
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | ||||| ||||||||||   ||  || |||||||| | ||| || |||| |||||||||||||| |||  ||||||| ||     
T  13039086 cttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttgttttttcataaactaccttaacaagctc 13038987  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || ||||||| || ||  ||||||||||||    
T  13038986 atgaataatatataaaagcttatttatttg 13038957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 41003434 - 41003397
Alignment:
Q  287 acaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||||||||||||||| || |||||||||||||    
T  41003434 acaaacttataaataatacataaaaacttatttatttg 41003397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 10365309 - 10365198
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||| | ||||| |||||||||||| | | | |  ||| ||||||||||||||||| ||   ||| |||||||||| ||| ||| |||| |||    
T  10365309 cttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttg-tttttcataaactactttgacaagctt 10365211  T
Q  295 ataaataatacat 307  Q
    || ||||||||||    
T  10365210 attaataatacat 10365198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 28122709 - 28122594
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||| ||| ||||||| || ||||||||||| |||  |||| || || || ||||||| || ||  || ||||||||| ||| |||| ||||||    
T  28122709 aacgaaaattttatctttataagttattttttcataaactaccttaagaagctcatgaataataaataaaagctaatttatttgcataagctgatttgca 28122610  T
Q  341 taagttctaaaataagc 357  Q
    ||| ||| |||||||||    
T  28122609 taaattc-aaaataagc 28122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 357
Target Start/End: Original strand, 35282591 - 35282701
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||| ||| || |||| |||||||||||||| |||  ||||||   |||||||||||| || ||  |||||||||||| ||| |||| |||||| |||    
T  35282591 aaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaataataaataaacgcttatttatttgcataagctgttttgca-aag 35282689  T
Q  345 ttctaaaataagc 357  Q
    ||| |||||||||    
T  35282690 ttc-aaaataagc 35282701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 343
Target Start/End: Original strand, 49738249 - 49738396
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||| ||  ||||| | ||| |||||||||| | ||  || |||||||||||||| || ||||||| |||||| | || ||||||| |||||||||    
T  49738249 ttatgcaagtatgtaagcttctatattaattcataagttctcactaacgaaaattgtattttcataaatt-ttttttaacaaactattttgacaaactta 49738347  T
Q  296 taaataatacattaatac-ttatttatttgtatatgctgctttgcataa 343  Q
    | |||||| ||| || || || |||||||  ||||| || |||||||||    
T  49738348 tgaataattcataaaaactttttttattttcatatgttgttttgcataa 49738396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 197 - 359
Target Start/End: Original strand, 2702664 - 2702826
Alignment:
Q  197 tatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttat 296  Q
    ||||||||||||||||| |||||||||||||||| |||| ||| || |||||||||||||| |||| |||| ||||||| | |||  |||||||||||||    
T  2702664 tatgcaaataattaagcttttatgttaattcataagatcttactaatgaaaattgtatattcataagttgtcttttcattaactaccttaacaaacttat 2702763  T
Q  297 aaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||||||| |||||||||||||| || ||| ||||||||||||||| ||||||||||||||    
T  2702764 aaataatacactaatacttatttatgtgcataagctgctttgcataagctctaaaataagcca 2702826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 200 - 328
Target Start/End: Original strand, 22397257 - 22397385
Alignment:
Q  200 gcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaa 299  Q
    |||||||||||||| |||| ||||||||||| |||| ||| ||||||||||||||||| |||| |||||||||||||| |||  |||||| |||||||||    
T  22397257 gcaaataattaagcttttaagttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaactaccttaacagacttataaa 22397356  T
Q  300 taatacattaatacttatttatttgtata 328  Q
    ||||||||||||| |||||||||||||||    
T  22397357 taatacattaatatttatttatttgtata 22397385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 43983375 - 43983462
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    |||||||||||||| ||||||| ||||||||| |||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  43983375 aacgaaaattgtatgtttataagttgtttttttataaactatcttaacaagcttataaataatacattaatgcttatttatttgtata 43983462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 357
Target Start/End: Original strand, 46175924 - 46176087
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| ||||| ||||| |||||| ||| | || ||| | |||||||||||| || ||||| | ||||||||||| |||  |||| |||     
T  46175924 aacttatgtaaataaataagcatttattttaatttataagctcttactagcgaaaattgtatcttcataaactattttttcataaactaccttaa-aaat 46176022  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  46176023 ttataaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagc 46176087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 15184639 - 15184525
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || ||||| ||||||||||||| ||| ||||| ||| ||||||||||||||| || ||||||||||||  ||| |||| |||  |    
T  15184639 aacgaaaattgtatcttcataaactgttttttcataaactactttaaaaaa-ttataaataatacataaaaacttatttatttacataagctgttttata 15184541  T
Q  341 taagttctaaaataag 356  Q
    |||| |||||||||||    
T  15184540 taagctctaaaataag 15184525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 356
Target Start/End: Complemental strand, 47202966 - 47202804
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||  |||||| ||||| ||||| |||||| ||| ||||  || |||||||||||||| || |||||| |||||||||||| |||  |||| |||     
T  47202966 aacttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaat 47202868  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||| |||||||| || ||||||||||||| ||| |||| |||  ||||| | |||||||||    
T  47202867 ttataagtaatacataaaaacttatttatttgcataagctgttttatataagctataaaataag 47202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 27368145 - 27368261
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    ||||| |||||||| |||||||| |||||||||||||||||  || |||||||||| ||||||| || ||  |||||||||||| ||| | || ||| ||    
T  27368145 aacgataattgtatctttataaactgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataagttgttttaca 27368244  T
Q  341 taagttctaaaataagcc 358  Q
    ||||||| ||||||||||    
T  27368245 taagttc-aaaataagcc 27368261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 356
Target Start/End: Original strand, 52700487 - 52700651
Alignment:
Q  192 gaacttatgcaaataattaagcctttatgttaattc-atatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaa 290  Q
    ||||||||| |||||| ||| | ||||||||||||  ||| | || ||| ||||||||| |||| || ||||| | ||||||||||| | | ||| ||||    
T  52700487 gaacttatgtaaataaataatcttttatgttaattttataagttcttactaacgaaaatcgtatcttcataaactattttttcataaaccacttttacaa 52700586  T
Q  291 acttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
     |||||||||||||||| || ||||||||||||  ||| | || |||||||||| |||||||||||    
T  52700587 gcttataaataatacataaagacttatttatttacataagttg-tttgcataagctctaaaataag 52700651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 29877778 - 29877614
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||  ||||| |||||||||||||||| | ||  || ||| |||||||||| || ||||  || |||||||||| |||  ||| ||| |||    
T  29877778 cttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaactaccttagcaagctt 29877679  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    || |||||||||| ||  |||||||||||| |||   || |||||||||| || |||||||||||    
T  29877678 atgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagcca 29877614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 7148911 - 7148782
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||| ||||||||| | ||  || || ||||||||||| |||||||  |||||||||| || |||  || |||| |||    
T  7148911 cttatgcaaataaataagcttttatgctaattcataagttctgactaaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagctt 7148812  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || |||||||||| ||  ||||||||||||    
T  7148811 atgaataatacataaaagcttatttatttg 7148782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 26206321 - 26206430
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatact 314  Q
    ||||| |||||| ||| | || ||| ||||||||| ||| ||| ||||| ||||||||||||| |||  ||||||| |||||||||||||||| || ||     
T  26206321 tttattttaatttataagttcttactaacgaaaatagtacattcataaactgttttttcataaactacgttaacaatcttataaataatacataaagaca 26206420  T
Q  315 tatttatttg 324  Q
    ||||||||||    
T  26206421 tatttatttg 26206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 38345769 - 38345917
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| |||||||||||||||| | ||   | ||  |||||||||| || |||| |||||||||||||| ||| ||| |||| |||    
T  38345769 cttatgtaaataaataagcttttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgacaa-ctt 38345867  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    || |||| ||||| ||  |||||||||||| ||| |||| ||||||||||    
T  38345868 atgaatactacataaaagcttatttatttggataagctgttttgcataag 38345917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 4603280 - 4603407
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||| ||||| |||||| |||   ||  || |||||||||||||| || ||||| ||||||||||||| |||  |||| ||| |||    
T  4603280 ttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaattgtatcttcataaactgttttttcataaactaccttaa-aaaatta 4603378  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    |||||||||||| || |||||||||||||    
T  4603379 taaataatacataaaaacttatttatttg 4603407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 19725383 - 19725271
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataa 343  Q
    ||||||| ||| || ||| | |||||||||||||  ||  |||||||||||||||||||||||| || || |||||| ||| ||| |||| |||| ||||    
T  19725383 gaaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatacataaaaacgtatttaattgcataagctgttttgtataa 19725284  T
Q  344 gttctaaaataag 356  Q
    | |||||||||||    
T  19725283 gctctaaaataag 19725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 23297574 - 23297413
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||| ||||||||| | ||   | ||| |||||||||| || ||||  |||||   ||||| |||  || ||||||||    
T  23297574 cttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgttt---cataaactaccttgacaaactt 23297478  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    || |||||||||| ||  |||||||||||| ||| |||  |||||||||| || |||||||||||    
T  23297477 atgaataatacataaaagcttatttatttgcataagctattttgcataagctcaaaaataagcca 23297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 35010304 - 35010222
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    ||||||| |||||| |||||||| | |||| |||||| |||  || ||||||||||||||||||||| || ||||||||||||    
T  35010304 aacgaaacttgtatctttataaactattttatcataaactacgttgacaaacttataaataatacataaaaacttatttattt 35010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 356
Target Start/End: Complemental strand, 35405822 - 35405663
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||| ||| | || ||| |||||||||| ||| || ||||  ||||||||||||| || | || ||||  ||    
T  35405822 cttatgcaaataaataagcttttatgttaattaata-ggtcttactaacgaaaattctatcttcataagctgttttttcataaactgtcttgacaagatt 35405724  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |   ||||||||| ||| |||| ||||||||||| | || |||||||||| || ||||||||    
T  35405723 aagtataatacataaat-cttagttatttgtataagttgttttgcataagctcaaaaataag 35405663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 48591371 - 48591500
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||| ||||||||||| | ||  |  |||||||||||||| || ||||  ||||||||||||| |||  || |||| | |    
T  48591371 cttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcgt 48591470  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || ||||||| || || |||||||||||||    
T  48591471 atgaataatatataaaaacttatttatttg 48591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 324
Target Start/End: Original strand, 55638048 - 55638157
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatact 314  Q
    |||||||||||| ||| | ||  || |||| | ||||||| |||||||| ||||||||||||| |||| || |||||||||| |||||||||| ||  ||    
T  55638048 tttatgttaatttataagttctcactaacggagattgtatctttataaactgttttttcataaactatatttacaaacttatgaataatacataaaagct 55638147  T
Q  315 tatttatttg 324  Q
    | ||||||||    
T  55638148 tgtttatttg 55638157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 17222968 - 17222856
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||| ||||||| ||||  |||||||||||||||| | ||  || |||||||||||||| || ||||  ||||||||||||| |||  || |||| |||    
T  17222968 cttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcataaactaccttgacaagctt 17222869  T
Q  295 ataaataatacat 307  Q
    || ||||||||||    
T  17222868 atgaataatacat 17222856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 23284812 - 23284883
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||| | ||||||| | ||| |||||||||||    
T  23284812 ttaacaaacttataaataataca-taaaatttatttatttgtataagatgctttgtagaagctctaaaataag 23284883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 42617223 - 42617338
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||  ||| || ||||| | ||||||||||| |||  |||| ||||||||||||||||| | || || |||||||||| ||| |||| |||| |    
T  42617223 aacgaaaatcatatcttcataaactattttttcataaactaccttaa-aaacttataaataatacttaaaaacgtatttatttgcataagctgttttgta 42617321  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  42617322 taagctctaaaataagc 42617338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 12495591 - 12495753
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagcta--ttttaacaaac 292  Q
    ||||||||||||| ||||  |||||||||||| ||| | ||  || || ||| ||||||| || || |  ||||||||||||| |||  |||| |||| |    
T  12495591 cttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagc 12495690  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    |||| |||||||||| ||  |||||||||||| ||| |||| ||||| |||| | ||||||||    
T  12495691 ttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa 12495753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 39932752 - 39932830
Alignment:
Q  246 aaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||| || ||||||||||||||||||  |||  ||||||| |||||||||||||||| ||   |||||||||||    
T  39932752 aaattgtatcttcataaattgttttttcatacactaccttaacaatcttataaataatacataaaagtttatttatttg 39932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 22303185 - 22303073
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataa 343  Q
    ||||||||||| || |||||| |||||||||||| |||  | || ||| ||||||||||||||| || ||||||||||||| |||  ||| |||  | ||    
T  22303185 gaaaattgtatcttcataaatggttttttcataaactacgtaaa-aaatttataaataatacataaaaacttatttatttgcataaactgttttataaaa 22303087  T
Q  344 gttctaaaataagc 357  Q
    | ||||||||||||    
T  22303086 gctctaaaataagc 22303073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 41229042 - 41228933
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| | ||| ||||| |||||||||| | ||  || || ||||||||||| || || | |||||||||||||| |||  ||||||| |||    
T  41229042 cttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgttttttcataaactaccttaacaagctt 41228943  T
Q  295 ataaataata 304  Q
    || |||||||    
T  41228942 atgaataata 41228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 43415300 - 43415365
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||||||||| ||| |||  ||||||| ||||| |||||||||| || |||||||||||||    
T  43415300 ataaattgttttttcgtaaactacattaacaaccttatgaataatacataaaaacttatttatttg 43415365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 354
Target Start/End: Original strand, 18424232 - 18424383
Alignment:
Q  202 aaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaata 301  Q
    |||||| ||||| |||||||||||||||| | |   |  ||| |||||||||| || ||||||||||||| ||||| |||  || ||||  |||| ||||    
T  18424232 aaataaataagcttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgttttt-cataaactaccttcacaagtttatgaata 18424330  T
Q  302 atacattaatacttatttatttgtatatgctgctttgcataagttctaaaata 354  Q
    |||||| ||  ||||||||||||||||   || |||||||||| || ||||||    
T  18424331 atacataaaagcttatttatttgtataaattgttttgcataagctcaaaaata 18424383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 10796452 - 10796361
Alignment:
Q  268 tttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||||||| | || ||||| | ||| |||||||||||| || ||||||||||||  | | | || |||||||||| ||||||||||||||    
T  10796452 tttttcataaaccatcttaacgagcttttaaataatacataaaaacttatttatttacacaagttgttttgcataagctctaaaataagcca 10796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 19414169 - 19414106
Alignment:
Q  294 tataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  19414169 tataaataatacataaaaacttatttatttgcataagctgttttctataagctctaaaataagc 19414106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 359
Target Start/End: Original strand, 43699500 - 43699594
Alignment:
Q  265 tgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||||||| |||  || |||| ||||| ||||| |||| ||  |||||||||||||||| | || ||| |||||| || |||||||||||    
T  43699500 tgttttttcataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagcca 43699594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 212959 - 213043
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||| |||||||||||||| |||  ||||||| ||||| ||||||| | ||| ||||||||||||| ||| | || ||||||||||    
T  212959 ataagttgttttttcataaactaccttaacaagcttatgaataata-aataaaacttatttatttgcataagttgttttgcataag 213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 36741043 - 36740914
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||| |||| ||||||| | ||  || || ||||||||||| || || || ||| ||||||||| ||| ||| |||| |||    
T  36741043 cttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaactactttgacaagctt 36740944  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    ||  |||||| || ||  ||||||||||||    
T  36740943 atgcataatatataaaagcttatttatttg 36740914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 897108 - 896980
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||| ||||| |||||| ||| | |   || ||||||||| |||| |   |||||||||||||||||| |||  || |||| ||||    
T  897108 ttatgcaaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgttttttcataaactacattgacaagctta 897009  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | |||||||||| ||   |||||||||||    
T  897008 tgaataatacataaaagtttatttatttg 896980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 2141731 - 2141651
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||||| || ||||| |||||||| ||||  ||  |||||||| |||||||||| |||| ||  ||||||||||||    
T  2141731 gaaaattgtatcttcataaactgtttttttataatataccttaacaaagttataaataacacataaaagcttatttatttg 2141651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 10794957 - 10795017
Alignment:
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||||||||| || ||||||||||||  | | |||| |||||||||| |||||||||||    
T  10794957 taaataatacataaaaacttatttatttacacaagctgttttgcataagctctaaaataag 10795017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 36298407 - 36298363
Alignment:
Q  259 ataaattgttttttc-ataagctattttaacaaacttataaataa 302  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||    
T  36298407 ataaattgttttttccataaactattttaacaaagttataaataa 36298363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 195 - 356
Target Start/End: Complemental strand, 15414131 - 15413970
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||| ||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||| |||| |||||||||  ||| |||  |||||||||||    
T  15414131 cttatgcgaataattaagcttttatgttaattcataagatcttactaacaaaaattgtatattcataagttgttttttagtaaactaccttaacaaactt 15414032  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    || ||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||    
T  15414031 atcaataatacattaatacttatttatttgcataagctgttttgcataagctctaaaataag 15413970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 40415907 - 40416079
Alignment:
Q  183 gtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctat 282  Q
    ||||||||||| |||| | |||||||||| | ||||| |||||||||| |||| ||| ||| |||||||||||||  ||| |||||||||||| | |||     
T  40415907 gtttggattgagcttacgtaaataattaaacttttatcttaattcataagatcttacaaacaaaaattgtatattcttaagttgttttttcatgaactac 40416006  T
Q  283 tttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
     ||||||||||||||||||||||||||||  ||| ||||||| ||| | || |||||||||| |||| |||||    
T  40416007 cttaacaaacttataaataatacattaatgtttagttatttgcataagttgttttgcataagctctataataa 40416079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 42852160 - 42851997
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||| ||| ||||| |||||||||||||||| | ||  || |||||||||||||| ||||||| |||||||||||||| |||| || |||| |||    
T  42852160 cttatgcaactaaataagcttttatgttaattcataagttctcactaacgaaaattgtat-tttataagttgttttttcataaactatcttgacaagctt 42852062  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    || |||||||||| ||  |||||||||||| ||| |||| ||||||||||  | |||||||||||    
T  42852061 atgaataatacataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagcca 42851997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 39990727 - 39990582
Alignment:
Q  183 gtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctat 282  Q
    ||||||||||| |||||| ||||||||||   ||||| |||||||||| |||  ||| ||  |||||||||||||  |||  |||||||||||||  ||     
T  39990727 gtttggattgagcttatgtaaataattaaatttttatcttaattcataagattttactaataaaaattgtatattcttaagatgttttttcataaattac 39990628  T
Q  283 tttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
     ||||||||| ||||||||||||||||||  |||||||||||||||    
T  39990627 cttaacaaacatataaataatacattaatgtttatttatttgtata 39990582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 215 - 357
Target Start/End: Complemental strand, 43319122 - 43318980
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatact 314  Q
    ||||| |||||||||| | ||  || |||||||||| ||  || ||||| ||||||||||||| |||  ||||||| |||||||||||||||| || ||     
T  43319122 tttatcttaattcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaagaca 43319023  T
Q  315 tatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||| ||| | || |||||||||| ||||||||||||    
T  43319022 tatttatttgcataagttgttttgcataagctctaaaataagc 43318980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 307
Target Start/End: Complemental strand, 28357504 - 28357379
Alignment:
Q  182 cgtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagcta 281  Q
    |||||||||||| ||||||||||||| ||||  ||||| ||||||| || | ||  || ||||||||||| |  || ||||| ||||||||||||| |||    
T  28357504 cgtttggattgagcttatgcaaataaataagtttttatcttaattcgtaagttctcactaacgaaaattggaccttcataaactgttttttcataaacta 28357405  T
Q  282 ttttaacaaacttataaataatacat 307  Q
      ||||||||||||||||||||||||    
T  28357404 cattaacaaacttataaataatacat 28357379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 40152823 - 40152956
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | ||||| |||||||||| | ||  | ||||||||||| ||| || ||||||||||||||||||| |||| |||||||| ||    
T  40152823 cttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataaattgttttttcataaactatcttaacaaattt 40152922  T
Q  295 ataaataatacattaatacttatttatttgtata 328  Q
    ||  |||||| || || |||||||||||| ||||    
T  40152923 atggataataaataaaaacttatttatttatata 40152956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 28625621 - 28625490
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    ||||||||||||||| ||||| |||||||||||||||| | ||  || |||||||||||||| || ||||  ||||||||||||| |||  || |||| |    
T  28625621 aacttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagc 28625522  T
Q  293 ttataaataatacattaatacttatttatttg 324  Q
    |||| |||||||| | ||  ||||||||||||    
T  28625521 ttatgaataatacttaaaagcttatttatttg 28625490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 360
Target Start/End: Original strand, 29922136 - 29922301
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || ||  ||||||||||||  ||||  ||| ||||||||| |||  || |||| |||    
T  29922136 cttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcataaactaccttgacaagctt 29922235  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagccat 360  Q
    || |||||||||| || ||||||||||||| |||  ||| |||||||||| || ||||||| ||||    
T  29922236 atgaataatacataaaaacttatttatttgcataaactgttttgcataagctcaaaaataaaccat 29922301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 357
Target Start/End: Complemental strand, 15122636 - 15122522
Alignment:
Q  242 acgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcat 341  Q
    ||||||||||||| || ||||| ||||||||||||| |||  |||| ||||||||||||||||||| || |||||||| |||| ||| | || |||  ||    
T  15122636 acgaaaattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttctttgcataagttgttttatat 15122538  T
Q  342 aagttctaaaataagc 357  Q
    ||| ||||||||||||    
T  15122537 aagctctaaaataagc 15122522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 26003090 - 26002975
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || |||||    ||||||||||  ||  |||||||||||||||||||||||| || ||||||||||||| |||  ||| |||| |    
T  26003090 aacgaaaattgtatcttcataaaccactttttcataaaataacttaacaaacttataaataatacataaaaacttatttatttgcataaactgttttgta 26002991  T
Q  341 taagttctaaaataag 356  Q
    |||| |||||||||||    
T  26002990 taagctctaaaataag 26002975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 344
Target Start/End: Complemental strand, 24030353 - 24030205
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||| | ||  || ||||||||||||||  |   || | |||||||||||| ||| ||| |||| |||    
T  24030353 cttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaagt-gttttttcataaactactttgacaagctt 24030255  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    || |||||||||| ||  |||||||||||| ||| |||| |||| |||||    
T  24030254 atgaataatacataaaagcttatttatttggataagctgttttgtataag 24030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 4728983 - 4728825
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| ||| | || ||| || ||||||| ||| || ||||| ||||||||||||| |||  |||| ||||||    
T  4728983 cttatgtaaataaataagcttttattttaatttataagctcttactaaggaaaattatat-ttcataaactgttttttcataaactaccttaa-aaactt 4728886  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
     || ||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||    
T  4728885 gtagataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataa 4728825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 33757156 - 33757065
Alignment:
Q  265 tgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| |||  |||| ||||||||||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  33757156 tgttttttcataaactagcttaa-aaacttataaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagc 33757065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 6025982 - 6026091
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||| ||||||||  |||||||||||| |||  |||||||| |||||||||||||| ||| || |||||||||| |||  ||  |||| |||||    
T  6025982 aaaattgtatctttataaaccgttttttcataaactacgttaacaaaattataaataataca-taaaacatatttatttgcataaactattttgtataag 6026080  T
Q  345 ttctaaaataa 355  Q
     ||||||||||    
T  6026081 ctctaaaataa 6026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 36206060 - 36206153
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttc-ataagctattttaacaaacttataaataatacat 307  Q
    ||||||||| |||||| |||| ||| ||||||||||||||||| |||| || ||||||  ||||  ||  ||||||||||||||||||||||||    
T  36206060 tttatgttagttcataagatcttactaacgaaaattgtatattcataagttattttttttataaattaccttaacaaacttataaataatacat 36206153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 347
Target Start/End: Original strand, 2502730 - 2502818
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttc 347  Q
    |||||||| || ||||||| ||| |||||||| || || ||||||| ||||| |||| |||||||||||| |||  |||||||||||||    
T  2502730 ataaattgattattcataaactactttaacaagctcatgaataataaattaaaacttgtttatttgtataagctcttttgcataagttc 2502818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 5203478 - 5203542
Alignment:
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||||| |||||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  5203478 ttataaataatacataaatacttatttatttgcataagctgttttatataagctctaaaataagc 5203542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 25332274 - 25332346
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||| |||  ||| |||||  |||||||||||    
T  25332274 ttaacaaacttataaataatatattaatgcttatttatttgcataagctattttacataaactctaaaataag 25332346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 29418700 - 29418828
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||  ||||| |||||| |||   ||  || |||||||||||||  || ||||||||||||||||||| |||  ||| ||  ||||    
T  29418700 ttatgcaaataaataagtttttatcttaatttataaattctcactaacgaaaattgtaccttcataaattgttttttcataaactacattagcatgctta 29418799  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    |||||||||||| || || ||||||||||    
T  29418800 taaataatacataaagacatatttatttg 29418828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 29659199 - 29659087
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  ||||| |||||||||| | ||  || || ||||||||||  || ||||| ||||||||| ||| |||  ||||||| |||    
T  29659199 cttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtactttcataaactgttttttcttaaactacattaacaagctt 29659100  T
Q  295 ataaataatacat 307  Q
    |||||||||||||    
T  29659099 ataaataatacat 29659087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 10537236 - 10537315
Alignment:
Q  265 tgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    ||||||||||||| |||| || |||| |||||||||||||||| ||  |||||||||||| ||| |||| ||| ||||||    
T  10537236 tgttttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataag 10537315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 42808944 - 42808873
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaata 312  Q
    |||||||||||||| || ||||||||||||| ||| | |||| || |||||||||| |||||||||| ||||    
T  42808944 aacgaaaattgtatcttcataaattgtttttgcattaactatgtttacaaacttatgaataatacatcaata 42808873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 13060552 - 13060678
Alignment:
Q  198 atgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttata 297  Q
    |||||||||| ||||| |||||||||||||||| | ||  || ||||||||| |||  || ||||  ||||||||||||| |||  || |||| |||||     
T  13060552 atgcaaataaataagcttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatg 13060651  T
Q  298 aataatacattaatacttatttatttg 324  Q
    || ||||||| ||  ||||||||||||    
T  13060652 aacaatacataaaagcttatttatttg 13060678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 15709911 - 15710000
Alignment:
Q  267 ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||| ||| ||||| ||||||||||||||||||  || ||||||||||||| ||| | || |||  ||||| ||||||||||||    
T  15709911 ttttttcataaactactttaa-aaacttataaataatacagaaaaacttatttatttgcataagttgttttatataagctctaaaataagc 15710000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 17657381 - 17657252
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | |||||||||||||||| | ||  || ||||||||| |||| || ||||  ||||||||||||| |||   |  ||| |||    
T  17657381 cttatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagctt 17657282  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || |||||||||| ||  ||||||||||||    
T  17657281 atgaataatacataaaagcttatttatttg 17657252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 15364079 - 15363991
Alignment:
Q  267 ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    |||||||| ||  ||| |||||||  ||||||||||||||||||||  ||||||||||||||  ||| ||| |||||  ||||||||||    
T  15364079 ttttttcaaaaattatcttaacaagtttataaataatacattaatatatatttatttgtataaactgatttacataaactctaaaataa 15363991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 23087746 - 23087838
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacat 307  Q
    ||||| |||||||||| | ||  || ||| |||||||||  || || | |||||||||||||| |||| ||||||| ||||||||||||||||    
T  23087746 tttatattaattcataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataatacat 23087838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 33667433 - 33667501
Alignment:
Q  289 aaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||| |||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  33667433 aaacttgtaaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagc 33667501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 344
Target Start/End: Complemental strand, 11991437 - 11991295
Alignment:
Q  201 caaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaat 300  Q
    ||||||| ||||| |||||||||||| |||   ||  || |||||||||||||| || |||| |  ||||||||||| | || || |||| |||||||||    
T  11991437 caaataaataagcttttatgttaatttataaactctcactaacgaaaattgtatgttcataacta-ttttttcataaaccatatttacaagcttataaat 11991339  T
Q  301 aatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    ||||||| ||  |||||||||||  ||| | || ||||||||||    
T  11991338 aatacataaaagcttatttatttacataagttgttttgcataag 11991295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 15364143 - 15364100
Alignment:
Q  192 gaacttatgcaaataattaagcctttatgttaattcatatgatc 235  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||    
T  15364143 gaacttatgcaaataaataagcttttatgttaattcataagatc 15364100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 17128351 - 17128256
Alignment:
Q  261 aaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||| ||||||||| ||| ||| | ||  |||| |||||||||| ||  |||||||||||| ||| |||| |||||||||| || ||||||||    
T  17128351 aaattgtattttcataaactactttgataagtttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataag 17128256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 22573726 - 22573643
Alignment:
Q  261 aaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    ||||||| ||||||||| |||  || ||||||||||||||||||||  || ||| ||||||||| ||| | || ||||||||||    
T  22573726 aaattgtattttcataaactacatttacaaacttataaataatacaaaaaaactcatttatttgcataagttgttttgcataag 22573643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 38461279 - 38461362
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    |||||| ||| || ||||| |||||||||||||  ||  || ||||||||||||||||||||| ||  ||||||||||| ||||    
T  38461279 aaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatacataaaggcttatttatttttata 38461362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 42478968 - 42478889
Alignment:
Q  192 gaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttt 271  Q
    |||||||||||||||| ||||  ||||| |||||||||| |||  ||| ||  ||||||||||||| |||| ||||||||    
T  42478968 gaacttatgcaaataaataagtttttatattaattcataagattttacaaataaaaattgtatattcataagttgttttt 42478889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 342036 - 341966
Alignment:
Q  288 caaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcc 358  Q
    ||||||| |||||||||||| || ||||||||||||  ||  | ||||||||||||| || ||||||||||    
T  342036 caaacttgtaaataatacataaaaacttatttatttacatgagttgctttgcataagctcaaaaataagcc 341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 7364251 - 7364365
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| ||||||||||||| ||||| ||||| |||||||||| | ||  || ||| || ||||||| || |||| |||||| || |||| |||  ||||||    
T  7364251 ttgagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaaca 7364350  T
Q  290 aacttataaataata 304  Q
    | ||||| |||||||    
T  7364351 agcttatgaataata 7364365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 17668466 - 17668377
Alignment:
Q  267 ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||| |||  |||| ||||||||||||||||||| || || |||||||||| ||| | || |||  ||||| ||||||||||||    
T  17668466 ttttttcataaactaccttaa-aaacttataaataatacataaacacctatttatttgcataagttgttttatataagctctaaaataagc 17668377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 20458505 - 20458666
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||  ||| | ||  || |||||||||||||| || ||||    |||||| |||| |||  |||| ||||||    
T  20458505 cttatgtaaataaataagcttttattttaatctataagttctgaccaacgaaaattgtattttcataacacatttttttataaactaccttaa-aaactt 20458603  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || |  |||||||||| ||| |||| |||  ||||| ||||||||||||    
T  20458604 ataaataatacataaaaatgtatttatttgcataagctgttttatataagctctaaaataagc 20458666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 41419645 - 41419531
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| |||||| |||||| ||||  |||||||||||| ||| | ||  || |||||||||||||| || ||||  ||||||||||||| |||  || |||    
T  41419645 ttgagcttatgaaaataaataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgaca 41419546  T
Q  290 aacttataaataata 304  Q
    | ||||| |||||||    
T  41419545 agcttatgaataata 41419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 11163235 - 11163288
Alignment:
Q  201 caaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtat 254  Q
    ||||||| ||||| |||||||||||||||| | ||| || ||||||||||||||    
T  11163235 caaataaataagcttttatgttaattcataagttcgcactaacgaaaattgtat 11163288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 18602691 - 18602618
Alignment:
Q  246 aaattgtatatttataaattgtttttt-cataagctattttaacaaacttataaataatacattaatacttatt 318  Q
    |||||||||||| |||| ||||||||| |||||||||  ||||||| ||||| ||||||| || || |||||||    
T  18602691 aaattgtatattcataagttgtttttttcataagctaccttaacaagcttatgaataataaataaaaacttatt 18602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 41059737 - 41059818
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    |||||||||||| ||||| |||||||||||||||| | ||  || ||||||||||| || || ||||  || ||||||||||    
T  41059737 ttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtgatttttcataa 41059818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 6008234 - 6008297
Alignment:
Q  242 acgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacatt 308  Q
    ||||||||||||| || |||||||||||   |||||  ||| ||||||||||| |||||||||||||    
T  6008234 acgaaaattgtatcttcataaattgttt---cataaaatatcttaacaaacttttaaataatacatt 6008297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 7984195 - 7984115
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||||| ||| |||| |||||||||  || | | ||| |||||||||| |||||||||| || ||||| |||||||    
T  7984195 gaaaattgtatctttgtaaactgttttttctcaaacaactttgacaaacttatgaataatacataaaaacttagttatttg 7984115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 356
Target Start/End: Complemental strand, 35078777 - 35078711
Alignment:
Q  289 aaacttataaataatacattaata-cttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||| ||||||||||||| |||| |||||||||||||||| | || ||||||||||||| ||||||||    
T  35078777 aaactcataaataatacat-aatagcttatttatttgtataagttgttttgcataagttc-aaaataag 35078711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 30974128 - 30973964
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||| ||||||||| |||| ||| ||||||||||||| ||| |||| |||||||||||||| ||   |||||||| ||    
T  30974128 cttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtaaattcataagttgttttttcataaactgccttaacaaattt 30974029  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||||||||||| ||| |||||||  ||| ||||||||||||||| ||||||||||||||    
T  30974028 ataaataatacattaatgcttctttatttacataagctgctttgcataagctctaaaataagcca 30973964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 359
Target Start/End: Original strand, 36907582 - 36907759
Alignment:
Q  186 tggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctatttt 285  Q
    |||||||| ||||||||||||| ||||| |||||| ||||||||| |||| ||| ||||||||||||||||| | || |||||||||||||| |||  ||    
T  36907582 tggattgagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcacaagttgttttttcataaactacctt 36907681  T
Q  286 aacaaactt----ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||| ||    ||||||||||||||||||||| |||||||| |||  |||||||||||||| ||||||||||||||    
T  36907682 aacaaatttataaataaataatacattaatacttctttatttgcataaactgctttgcataagctctaaaataagcca 36907759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 2563497 - 2563368
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||| |||||||||| || |||||||||||||||| |||| ||| ||  ||||||||||||| | || |||||||||||||| ||| ||||||||||||    
T  2563497 cttatacaaataattatgcttttatgttaattcataagatcttactaataaaaattgtatattcaaaagttgttttttcataaactactttaacaaactt 2563398  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    |||||||||||||||||| |||||||||||    
T  2563397 ataaataatacattaatatttatttatttg 2563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 195 - 356
Target Start/End: Original strand, 19925336 - 19925496
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||| ||||||||||||| ||||||||||||||||  ||| ||| ||||||||||||||||| |||| ||||| |||||||| |||  |||||||  ||    
T  19925336 cttatacaaataattaagcttttatgttaattcataatatcttactaacgaaaattgtatattcataagttgttatttcataa-ctaccttaacaagttt 19925434  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||||||| |||||||||||| |||  ||| | |||||||| |||||||||||    
T  19925435 ataaataatacattaatgcttatttatttgcataaactgttatgcataagctctaaaataag 19925496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 192 - 359
Target Start/End: Complemental strand, 14262468 - 14262301
Alignment:
Q  192 gaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaa 291  Q
    ||||||||||||| || ||||  |||||||||||||||| |||| ||| ||| ||||||||||||| |||| |||||||||||||| |||  ||||||||    
T  14262468 gaacttatgcaaaaaaataagtttttatgttaattcataagatcttactaacaaaaattgtatattcataagttgttttttcataaactaccttaacaaa 14262369  T
Q  292 cttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
     |||||||||| |||||||| ||| |||||||| ||| | ||| || |||||| ||| ||| ||||||    
T  14262368 tttataaataacacattaatgcttctttatttgcataaggtgccttacataagctctgaaagaagcca 14262301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 2669787 - 2669658
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| |||||||||||||||| |||| ||| || ||||| |||||||| |||| |||||||||||||| |||  |||||||||||    
T  2669787 cttatgaaaataaataagcttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttgttttttcataaactaccttaacaaactt 2669688  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    |||||||||||||||   ||||||||||||    
T  2669687 ataaataatacattagagcttatttatttg 2669658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 43577339 - 43577199
Alignment:
Q  216 ttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatactt 315  Q
    |||||||||||||||  ||  ||| |||||||||| ||||||||||| ||||||||| |||| |||  |||||||| |||||||||||||||||||| ||    
T  43577339 ttatgttaattcataaaattttactaacgaaaattttatatttataagttgtttttttataaactaccttaacaaatttataaataatacattaatattt 43577240  T
Q  316 atttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||| |||  ||  |||||||||| |||||||||||    
T  43577239 atttatttgcataaactattttgcataagctctaaaataag 43577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 9782302 - 9782209
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacatt 308  Q
    |||||||||||||||| |||| ||| ||||||||||||||||| |||| ||||||||| |||| ||| |||||||| |||||||||||||||||    
T  9782302 tttatgttaattcataagatcttactaacgaaaattgtatattcataagttgttttttaataaactactttaacaagcttataaataatacatt 9782209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 12607218 - 12607057
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| ||| | ||  || |||| ||||||||| || |||||  |||||||||||| |||  |||| ||||||    
T  12607218 cttatgtaaataaataagcttttattttaatttataagctctcactaacggaaattgtatcttcataaaccgttttttcataaactaccttaa-aaactt 12607120  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| |||||||| |||  ||||| ||||||||||||    
T  12607119 ataaataatacataaaaacttatttatttgcatatgctgttttatataagctctaaaataagc 12607057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 1184922 - 1184793
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||| ||||||||||||  || ||||||||| |||  ||| ||| ||||||||||||||||||| || ||||||||  |||| |||  |||||||||||    
T  1184922 cttatacaaataattaagttttaatgttaatttataatatcctactaacgaaaattgtatatttagaagttgtttttagataaactaccttaacaaactt 1184823  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
     ||||| |||||||||| ||||||||||||    
T  1184822 ttaaatgatacattaatgcttatttatttg 1184793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 19925650 - 19925536
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaata-cttatttatttgtatatgctgctttgc 339  Q
    |||||||||||||| || ||||||||||||||| |||  ||  ||||||||||||||||||||| ||||| | |||||||||||| ||| |||| ||||     
T  19925650 aacgaaaattgtatcttcataaattgttttttcgtaaaataccttaacaaacttataaataata-attaaaagcttatttatttgcataagctgttttgt 19925552  T
Q  340 ataagttctaaaataa 355  Q
    |||||  |||||||||    
T  19925551 ataagccctaaaataa 19925536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 42102199 - 42102085
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || || ||  |||||||||||| |||  |||| ||||||||||||||||||| || ||||||||||||| ||| |||| |||  |    
T  42102199 aacgaaaattgtatcttcattaacggttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataagctgttttata 42102101  T
Q  341 taagttctaaaataag 356  Q
    |||| |||||||||||    
T  42102100 taagctctaaaataag 42102085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 42363264 - 42363425
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| | | | ||  || ||| |||||||||| || |||||  |||||||||||| |||  |||| ||||||    
T  42363264 cttatgtaaataaataagcttttattttaatttaaaagttctcactaacaaaaattgtatcttcataaacggttttttcataaactaccttaa-aaactt 42363362  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| ||| |||  |||  ||||| ||||||||||||    
T  42363363 ataaataatacataaaaacttatttatttgcataagctattttatataagctctaaaataagc 42363425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 356
Target Start/End: Complemental strand, 32131578 - 32131418
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||  ||||| |||||||||||||||| | ||  || |  ||||||||||| || |||  |||||| ||||||| |||  || |||||||||    
T  32131578 ttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttgtttattcataaactaccttgacaaactta 32131479  T
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
      |||||| ||| ||  |||||||||||| ||| |||| |||||||||| || ||||||||    
T  32131478 ggaataatgcataaaagcttatttatttgcataagctgttttgcataagctcaaaaataag 32131418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 11988337 - 11988207
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| || || ||||| |||||| ||| | ||  || |||||||||||||| || |||||  |||||||||| | |||  |||| ||||    
T  11988337 aacttatgtaaataaatatgcttttattttaatttataagctctcactaacgaaaattgtatcttcataaacggttttttcatgaactaccttaa-aaac 11988239  T
Q  293 ttataaataatacattaatacttatttatttg 324  Q
    ||||||||||||||| || |||||||||||||    
T  11988238 ttataaataatacataaaaacttatttatttg 11988207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 31079113 - 31079240
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  ||||| |||||||||| | |   || | |||||||||||  ||||||||  |||||||| ||| ||| ||||||||||||    
T  31079113 cttatgcaaataaataagtttttatcttaattcataagttttcactatcgaaaattgtaactttataaacagttttttcgtaaactactttaacaaactt 31079212  T
Q  295 ataaataatacattaatacttatttatt 322  Q
    | ||||||||||| ||| | ||||||||    
T  31079213 aaaaataatacataaatgcatatttatt 31079240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 37410860 - 37411021
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  | ||| |||||| ||| | || ||| |||||||||||||| || || || ||||||||||||| |||  |||| ||| ||    
T  37410860 cttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatcttcatgaactgttttttcataaactaccttaa-aaaatt 37410958  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||  |||  ||| |||  ||||| ||||||||||||    
T  37410959 ataaataatacataaaaacttatttatttacataaactgttttatataagctctaaaataagc 37411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 32975826 - 32975697
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || ||| |||||||||| || |||| |||| ||||||||| |||  || |||| |||    
T  32975826 cttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcataaactaccttgacaagctt 32975727  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || ||||||| || ||  ||||||||||||    
T  32975726 atgaataatatataaaagcttatttatttg 32975697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 359
Target Start/End: Complemental strand, 14942559 - 14942399
Alignment:
Q  199 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataa 298  Q
    ||||||||| ||||  |||||||||||| ||| | || | | ||| ||||||| || || |||| | |||||||||||| |||  ||||||| |||||||    
T  14942559 tgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcgttttttcataaactaacttaacaagcttataa 14942460  T
Q  299 ataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||  ||  ||||||||| |  ||| | || ||| |||||| ||||||||||||||    
T  14942459 ataatacacaaaagcttatttatatacataagttgttttacataagctctaaaataagcca 14942399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 23412812 - 23412744
Alignment:
Q  256 tttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||||||||||||||||||||| |||| || ||||  |||| |||||||||| ||||||||| ||||||    
T  23412812 tttataaattgttttttcataaactatattgacaagtttatgaataatacataaatacttatatatttg 23412744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 2019670 - 2019757
Alignment:
Q  269 ttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||| |||| |||| ||||||| ||| |||||||||||| |  ||||||||||||| ||| | || |||||||||| |||||||||||    
T  2019670 tttttataaactatcttaacaagcttgtaaataatacataatgacttatttatttgcataagatgttttgcataagctctaaaataag 2019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 28280777 - 28280719
Alignment:
Q  266 gttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||||||||||| |||  |||||||||||||||||||||||| ||| | ||||||||||    
T  28280777 gttttttcataaactacattaacaaacttataaataatacataaatgcatatttatttg 28280719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 38338798 - 38338959
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  ||||| |||||| ||| | ||  || |||||||||  ||| || ||||| | ||||||||||| |||  |||| ||||||    
T  38338798 cttatgtaaataaataagtttttattttaatttataagttctcactaacgaaaatcatatcttcataaactattttttcataaactaccttaa-aaactt 38338896  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||  | || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  38338897 ataaataatatttaaaaacttatttatttgcataagctgttttatataagctctaaaataagc 38338959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 9131075 - 9131204
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | |||||||||||||||| | ||  || |||||||||||||| || ||||  ||||| |||| || |||  |  |||| |||    
T  9131075 cttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataagctgtttcttcagaaactaaatcgacaagctt 9131174  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    ||||||||||||| ||  ||||| ||||||    
T  9131175 ataaataatacataaaagcttatatatttg 9131204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 32751231 - 32751115
Alignment:
Q  241 aacgaaaattgtatatttataaattg-ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgc 339  Q
    |||||||||||||| |||||||| || ||||||||||| ||| ||||| |||||||| |||| ||||| || | ||||||||||| |||   || ||       
T  32751231 aacgaaaattgtatttttataaaatgtttttttcataaactactttaa-aaacttattaatagtacataaaaatttatttatttgcataaattgtttaat 32751133  T
Q  340 ataagttctaaaataagc 357  Q
    ||||||||||||||||||    
T  32751132 ataagttctaaaataagc 32751115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 357
Target Start/End: Complemental strand, 38195575 - 38195464
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||| |  ||||| ||||||||| ||| |||  |||| |||||||||||||||| || || ||||||||||||| ||| | || |||  |||||    
T  38195575 aaaattgtatttccataaactgttttttcgtaaactaccttaa-aaacttataaataatatataaaaacttatttatttgcataagttgttttatataag 38195477  T
Q  345 ttctaaaataagc 357  Q
     ||||||||||||    
T  38195476 ctctaaaataagc 38195464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 218202 - 218327
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||  ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||| ||||| |||  |||| |||||||    
T  218202 ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaatagttttt-cataaactaccttaa-aaactta 218299  T
Q  296 taaataatacattaatacttatttattt 323  Q
    |||||||||||| || | ||||||||||    
T  218300 taaataatacataaaaatttatttattt 218327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 694762 - 694887
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||  ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||| ||||| |||  |||| |||||||    
T  694762 ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaatagttttt-cataaactaccttaa-aaactta 694859  T
Q  296 taaataatacattaatacttatttattt 323  Q
    |||||||||||| || | ||||||||||    
T  694860 taaataatacataaaaatttatttattt 694887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 698971 - 699096
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||  ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||| ||||| |||  |||| |||||||    
T  698971 ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaatagttttt-cataaactaccttaa-aaactta 699068  T
Q  296 taaataatacattaatacttatttattt 323  Q
    |||||||||||| || | ||||||||||    
T  699069 taaataatacataaaaatttatttattt 699096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 731825 - 731950
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||  ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||| ||||| |||  |||| |||||||    
T  731825 ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaatagttttt-cataaactaccttaa-aaactta 731922  T
Q  296 taaataatacattaatacttatttattt 323  Q
    |||||||||||| || | ||||||||||    
T  731923 taaataatacataaaaatttatttattt 731950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 855721 - 855846
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||| ||||  ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||| ||||| |||  |||| |||||||    
T  855721 ttatgtaaataagtaagtttttattttaatttataagctattactaacgaaaattgtatcttcataaatagttttt-cataaactaccttaa-aaactta 855818  T
Q  296 taaataatacattaatacttatttattt 323  Q
    |||||||||||| || | ||||||||||    
T  855819 taaataatacataaaaatttatttattt 855846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 19327955 - 19327857
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||| |||||||| ||||||| ||||| |||  ||| ||||||||| |||||||||| ||   ||||||||||| ||| | || ||||||||||    
T  19327955 aaaattgtatctttataaactgtttttccataaactacatta-caaacttatgaataatacataaaagtttatttatttgcataagttgttttgcataag 19327857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 14724911 - 14725021
Alignment:
Q  194 acttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaact 293  Q
    |||||||||||||| ||||  ||||| |||||||||| | || ||  |||||||||| ||  |  |||| ||||||||||||||  ||  ||||||| ||    
T  14724911 acttatgcaaataaataagtttttatcttaattcataagttcttattaacgaaaattatacctacataagttgttttttcataaattacattaacaatct 14725010  T
Q  294 tataaataata 304  Q
    |||||||||||    
T  14725011 tataaataata 14725021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 16926676 - 16926807
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgtttt----ttcataagctattttaacaaa 291  Q
    |||||||||||| ||||  |||||||||||| ||| | ||  || |||| ||||||| | |||||||| ||||||    ||||||| |||| || |||||    
T  16926676 ttatgcaaataaataagtttttatgttaatttataagttctcactaacggaaattgtttctttataaactgtttttttcttcataaactatatttacaaa 16926775  T
Q  292 cttataaataatacattaatacttatttattt 323  Q
    || || |||||||||||||   ||||||||||    
T  16926776 ctaatcaataatacattaaagtttatttattt 16926807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 24350466 - 24350548
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    ||||||||||||| ||||  |||||||||||||||| | || ||| |||||||||| ||| || ||||  | |||||||||||    
T  24350466 cttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcataa 24350548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 24866944 - 24867010
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacat 307  Q
    |||||||||||||  || ||||  ||||||||||||| |||  ||||||| ||||||||||||||||    
T  24866944 aacgaaaattgtaccttcataagctgttttttcataaactacattaacaatcttataaataatacat 24867010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 42667065 - 42666976
Alignment:
Q  266 gttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||| ||||| ||||||||| ||||||||||||||||||| |  |||| |||||||| ||| | || |||  |||||| ||||||||||    
T  42667065 gtttttccataaactattttaa-aaacttataaataatacataacaacttgtttatttgcataagttgttttatataagtcctaaaataag 42666976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 323
Target Start/End: Original strand, 402122 - 402163
Alignment:
Q  282 ttttaacaaacttataaataatacattaatacttatttattt 323  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  402122 ttttgacaaacttataaataatacataaaaacttatttattt 402163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 35168435 - 35168500
Alignment:
Q  242 acgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacat 307  Q
    ||||||||||||| || ||||| ||||||||||||| |||  || |||| ||||| ||||||||||    
T  35168435 acgaaaattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaataatacat 35168500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 9130959 - 9131023
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtat 254  Q
    |||| ||||||||||||| ||| | |||||||||||||||| | ||  || ||||||||||||||    
T  9130959 ttgagcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtat 9131023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 16706116 - 16706196
Alignment:
Q  264 ttgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||||||| |||  ||  ||||||||| |||||||||| || || |||||||||| ||| || | ||||||||||    
T  16706116 ttgttttttcataaactacattttcaaacttatgaataatacataaaaacatatttatttgcataagccgttttgcataag 16706196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 29218289 - 29218333
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    |||||||||||| ||||||||||| || |||||| ||||||||||    
T  29218289 ttaacaaacttaaaaataatacataaaaacttatgtatttgtata 29218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 31459136 - 31459036
Alignment:
Q  245 aaaattgtatatttataaattgttttttc-ataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataa 343  Q
    |||||||| | |||||||| ||||||||  |||| |||| || |||||||||||||||||| || || | ||||||||||  |||  ||||||| |||||    
T  31459136 aaaattgtttctttataaactgttttttttataaactatattgacaaacttataaataatatataaaaatttatttatttacataaactgcttttcataa 31459037  T
Q  344 g 344  Q
    |    
T  31459036 g 31459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 37966227 - 37966299
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||| ||||||||||||||||  |||  |||||||||| ||| |||  |||||||||  |||||||||||    
T  37966227 ttaacaagcttataaataatacatatataaatatttatttgcataagctattttgcataaactctaaaataag 37966299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 41145344 - 41145451
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||  | ||| |||||||||| | ||  || || |||||| |||| |||| || |||||||||||||| |||  ||||||||||||    
T  41145344 ttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatcttta-aagttgttttttcataaactaccttaacaaactta 41145442  T
Q  296 taaataata 304  Q
    | |||||||    
T  41145443 tgaataata 41145451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 35809229 - 35809065
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||||||||| ||||||||||||||||  ||| |||   |||||||||||||||  ||| |||||||||||||| |||  ||||||| |||    
T  35809229 cttatgtaaataattaagcttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgttttttcataaactacgttaacaagctt 35809130  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||||||||||| |||||||||||| ||| | ||||||| ||||| ||||||||||||||    
T  35809129 ataaataatacattaatgcttatttatttgcataagatgctttgtataagctctaaaataagcca 35809065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 199 - 359
Target Start/End: Original strand, 22319243 - 22319402
Alignment:
Q  199 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataa 298  Q
    ||||||||||||||| || ||||||||| |||  ||| ||| ||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||| |    
T  22319243 tgcaaataattaagctttgatgttaatt-ataatatcttactaacgaaaattgtatattcataagttgttgtttcataaactatgttaacaaacttatga 22319341  T
Q  299 ataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||||||||||  ||||||||||| |||  |  ||||||||||  ||||||||||||||    
T  22319342 ataatacattaatgtttatttatttgcataaacctctttgcataaactctaaaataagcca 22319402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 356
Target Start/End: Complemental strand, 22575705 - 22575564
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatact 314  Q
    ||||| |||||| ||| | || ||| |||||||||||||| || ||||| |||||||||||||  ||| |||||||||||||||||||||||| || ||     
T  22575705 tttattttaatttataagctcttactaacgaaaattgtatcttcataaactgttttttcataaaatatcttaacaaacttataaataatacataaaaacg 22575606  T
Q  315 tatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||||||| ||| | || ||| |||||| |||||||||||    
T  22575605 tatttatttgcataagatgttttacataagctctaaaataag 22575564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 22032901 - 22032739
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  ||||| |||||| ||| | ||  || |||||||||||||  || ||||||||||||||||||| |||  ||||||  |||    
T  22032901 cttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcataaactacattaacatgctt 22032802  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || || |||||||||| ||| | || ||| |||||| ||||||||||||    
T  22032801 ataaataatacataaaaacatatttatttgcataagttgttttacataagctctaaaataagc 22032739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 29378784 - 29378655
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||| ||||||||||| | || ||| |||||||||||||| || ||||  ||||||||||||| |||  || |||||||     
T  29378784 cttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaaactc 29378685  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    ||||||||||||| ||  ||||||||||||    
T  29378684 ataaataatacataaaagcttatttatttg 29378655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 28004722 - 28004561
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||| ||| | || | |  |||||| |||||| || |||||| |||||||||||| ||| || || ||| ||    
T  28004722 cttatgcaaataaataagcttttattttaatttataagctcttgctgacgaaatttgtatcttcataaatggttttttcataaactacttaaaaaaa-tt 28004624  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  28004623 ataaataatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagc 28004561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 47862860 - 47862732
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| ||||||||||   |||||||||||||||| |||  ||  ||||||||||||||||||||||||| |||||||||||   |  |||| ||||||    
T  47862860 cttatgtaaataattaaatttttatgttaattcataagattttattaacgaaaattgtatatttataaattattttttcataaatcaccttaaaaaactt 47862761  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    | |||||||||| |||| ||||||||||||    
T  47862760 aaaaataataca-taatgcttatttatttg 47862732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 47654361 - 47654523
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  ||||| |||||||||| | ||  || |||||||||||||  || ||||| ||||||||||||| |||  ||||||| |||    
T  47654361 cttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacattaacaagctt 47654460  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||| ||||||||| |   | |||||||||  ||| |||| |||||| ||| ||||||||||||    
T  47654461 atatataatacatcagggcatatttatttacataagctgttttgcaaaagctctaaaataagc 47654523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 44613420 - 44613569
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  |  ||  ||||||||||  | |||| |||||||||||||| |||  ||||||| |||    
T  44613420 cttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttgttttttcataaactaccttaacaagctt 44613519  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    || ||||||| || ||  |||||||||||| ||| |||| ||||||||||    
T  44613520 atgaataataaataaaagcttatttatttgcataagctgttttgcataag 44613569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 24371447 - 24371515
Alignment:
Q  289 aaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  24371447 aaacttataaataatacattaaaacttatttatttgcataagctgttttatataagctctaaaataagc 24371515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 358
Target Start/End: Complemental strand, 20888715 - 20888549
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    ||||||||||||||| ||||  |||||||||||| ||| | |   ||| | ||||||||||| || ||||||||||||||||||| |||  ||  ||| |    
T  20888715 aacttatgcaaataagtaagtttttatgttaatttataagttttcacggaagaaaattgtatcttcataaattgttttttcataaactacctttgcaagc 20888616  T
Q  293 ttataaataatacattaata-cttatttatttgtatatgctgctttgcataagttctaaaataagcc 358  Q
    |||| |||||||||| || | |||||||||||| |||  ||| ||||  |||||||  |||||||||    
T  20888615 ttatgaataatacataaaaagcttatttatttgcataaactgttttgtttaagttcataaataagcc 20888549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 14691249 - 14691358
Alignment:
Q  198 atgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttata 297  Q
    |||||||||| ||| | |||||||||||||||| | ||  || |||||||||| ||| || |||||||||||||||||||  ||  || |||| |||||     
T  14691249 atgcaaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatg 14691348  T
Q  298 aataatacat 307  Q
    ||||||||||    
T  14691349 aataatacat 14691358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 16932877 - 16933001
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| | |||| ||||| ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||||||||| |||  |||| ||||||    
T  16932877 cttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaactt 16932975  T
Q  295 ataaataatacattaatacttattta 320  Q
    ||||||||||||| || | |||||||    
T  16932976 ataaataatacataaaaatttattta 16933001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 16938260 - 16938384
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| | |||| ||||| ||||| |||||| ||| | |  ||| |||||||||||||| || |||||| |||||||||||| |||  |||| ||||||    
T  16938260 cttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaactt 16938358  T
Q  295 ataaataatacattaatacttattta 320  Q
    ||||||||||||| || | |||||||    
T  16938359 ataaataatacataaaaatttattta 16938384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 14675956 - 14676035
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||||||| || ||||| ||||||||||||| |||  |||| ||||||||||||||||||| || || ||||||||||    
T  14675956 gaaaattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaacacctatttatttg 14676035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 1312203 - 1312093
Alignment:
Q  244 gaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataa 343  Q
    ||||| |||||||| |||||  |||||||||||| ||   |||| |||||||||||||||| || || |||||||||| |||||| |||| |||  ||||    
T  1312203 gaaaagtgtatattcataaacggttttttcataaactgccttaa-aaacttataaataatatataaaaacttatttatctgtataagctgttttttataa 1312105  T
Q  344 gttctaaaataa 355  Q
    | ||||||||||    
T  1312104 gctctaaaataa 1312093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 991638 - 991513
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| |||   ||  || |||||||| ||||| || |||||| |||||||||||| |||  |||| ||||||    
T  991638 cttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaagtgtatcttcataaatggttttttcataaactaccttaa-aaactt 991540  T
Q  295 ataaataatacattaatacttatttat 321  Q
    ||||||||| ||| || ||||||||||    
T  991539 ataaataatgcataaaaacttatttat 991513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 16958954 - 16958793
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| | |||| ||||| ||||| |||||| ||| | |  ||| |||||||||||||| || |||||  |||||||||||| |||  |||| ||||||    
T  16958954 cttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataaacggttttttcataaactaccttaa-aaactt 16958856  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || | ||||||| ||| ||| | || |||  ||||| || |||||||||    
T  16958855 ataaataatacataaaaatttatttagttgcataagttgttttatataagctcaaaaataagc 16958793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 356
Target Start/End: Complemental strand, 38372694 - 38372536
Alignment:
Q  198 atgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttata 297  Q
    |||||||||| | ||| |||||||||||||||| | ||  || |||||||||||| | ||  | |  || |||||| ||| |||  || ||||||||||     
T  38372694 atgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttcttgagctgctttttcgtaaactaccttgacaaacttatg 38372595  T
Q  298 aataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||||||| |   |||||||||||| ||| |||| |||||||||| || ||||||||    
T  38372594 aataatacataagagcttatttatttgcataagctgttttgcataagctcaaaaataag 38372536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 18251491 - 18251565
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaa 290  Q
    |||||||||||| ||| |||  | | ||||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  18251491 tttatgttaatttataagattttgctaacgaaaattgtatattcataaattg-tttttcataaactactttaacaa 18251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 7098118 - 7098180
Alignment:
Q  266 gttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    |||||||||||| |||| || |||||||||| |||||| ||| ||  ||||||||||||||||    
T  7098118 gttttttcataaactatcttgacaaacttatgaataattcataaaatcttatttatttgtata 7098180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 296
Target Start/End: Complemental strand, 12473497 - 12473391
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| ||||| ||||||| ||||| | ||| |||||| ||| | ||  || |||||||||||| | |||||||| ||||||||||||| |||  || |||    
T  12473497 ttgagcttattcaaataaataagcttatatattaatttataagttctcacaaacgaaaattgtttctttataaactgttttttcataaactacatttaca 12473398  T
Q  290 aacttat 296  Q
    |||||||    
T  12473397 aacttat 12473391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 18837243 - 18837197
Alignment:
Q  313 cttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||||||||| |||||||| |||||||||| || |||||||||||    
T  18837243 cttatttatttgcatatgctgttttgcataagctcaaaaataagcca 18837197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 21027510 - 21027584
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttattt 319  Q
    |||||||||| || | ||| ||||||||||||| | |  |||| ||||||||||||||||||| || ||||||||    
T  21027510 aaaattgtatcttcaaaaactgttttttcataaaccaccttaataaacttataaataatacataaaaacttattt 21027584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 357
Target Start/End: Original strand, 23137110 - 23137271
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||||| |||||| ||| | ||  || || ||||||||||| || |||||   ||||| ||||| |||  |||| ||||||    
T  23137110 cttatgtaaataagtaagcttttattttaatttataagctctcactaatgaaaattgtatcttcataaacgatttttacataaactaccttaa-aaactt 23137208  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || | |||||| |||||||| | |  |||  ||||| ||||||||||||    
T  23137209 ataaataatacataaaaatttatttgtttgtataagttattttatataagctctaaaataagc 23137271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 30094676 - 30094811
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgtttt---ttcataagctattttaacaaa 291  Q
    ||||||||||||| ||||| ||||| |||||||||| ||||  || || ||||| |||   || ||||| ||||||   ||||||| |||  |||||||     
T  30094676 cttatgcaaataaataagcttttatcttaattcataagatctcaccaatgaaaagtgtcc-ttcataaactgtttttttttcataaactacattaacaat 30094774  T
Q  292 cttataaataatacattaatacttatttatttgtata 328  Q
    ||||||||||||| ||||| ||  |||||||||||||    
T  30094775 cttataaataatatattaagacacatttatttgtata 30094811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 41094352 - 41094228
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| |||| || |||||||||||||||  || ||| |||||||||||||| || |||| |  ||||||||||| | |  || |||| ||||    
T  41094352 ttatgcaaataaataaggctgtatgttaattcatat--tcttactaacgaaaattgtatcttcataagt--ttttttcataaaccaccttgacaagctta 41094257  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | | |||||||| ||  ||||||||||||    
T  41094256 tgagtaatacataaaggcttatttatttg 41094228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 21249219 - 21249166
Alignment:
Q  271 ttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    ||||||| ||||||||  |||||||| |||||||||| || |||||||||||||    
T  21249219 ttcataaactattttattaaacttatgaataatacataaaaacttatttatttg 21249166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 35246762 - 35246649
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    ||||||||||||||  | |||||  |||||||||||| |||  |||| |||||| |||||||||||| || ||||||||||||| ||| | || |||  |    
T  35246762 aacgaaaattgtatcctcataaa--gttttttcataaactaccttaa-aaacttttaaataatacataaaaacttatttatttgcataagttgttttata 35246666  T
Q  341 taagttctaaaataagc 357  Q
    || | ||||||||||||    
T  35246665 taggctctaaaataagc 35246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 18260890 - 18260954
Alignment:
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||| ||||||||||||||||||||||||  ||| | || ||| ||||||  |||||||||||    
T  18260890 ttataactaatacattaatacttatttatttacataagttgtttttcataagcactaaaataagc 18260954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 358
Target Start/End: Original strand, 23119910 - 23120029
Alignment:
Q  238 acgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgcttt 337  Q
    |||||| |||||||||| || | ||| |||| |||| ||| |||  || |||||||||| |||||||| ||||   ||||||||||| ||| | || |||    
T  23119910 acgaacaaaaattgtatcttcacaaactgttatttcttaaactacattgacaaacttatgaataatactttaaagattatttatttgcataggttgtttt 23120009  T
Q  338 gcataagttctaaaataagcc 358  Q
    ||||||| || ||||||||||    
T  23120010 gcataagctc-aaaataagcc 23120029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 30181688 - 30181560
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||| |||||||||||||||| | ||  || || |||||  |||| || ||||  |||||||| |||| |||  || |||| ||||    
T  30181688 ttatgcaaataaataagcttttatgttaattcataagttcccactaatgaaaacagtatcttcataagctgttttttgataaactaccttgacaagctta 30181589  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | |||||||||| ||  ||| ||||||||    
T  30181588 tgaataatacataaaagcttctttatttg 30181560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 47582561 - 47582620
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctat-tttaacaaacttataaataata 304  Q
    |||||||||| || ||||||||||||  ||||| |||| ||||||||||||||||||||||    
T  47582561 aaaattgtatcttcataaattgttttc-cataaactatctttaacaaacttataaataata 47582620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 4974450 - 4974286
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||| |||  ||| ||| || |||||||||| |||| |||||||||||||| |||  ||| |||  ||    
T  4974450 cttatgcaaataaataagcttttatgttaattcataagattttaccaacaaatattgtatattcataacttgttttttcataaactaccttagcaagttt 4974351  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||||||||| | |||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  4974350 ataaataatacattagtgcttatttatttgcataagctgctttgcataagctctaaaataagcca 4974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 38524227 - 38524098
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||| |||| ||| ||||||||||| ||||| ||||||  ||||||||||| |||  |||||||| ||    
T  38524227 cttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaattgcatattcataaatgattttttcataaactaccttaacaaattt 38524128  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    ||||||||||||||||||||||||||||||    
T  38524127 ataaataatacattaatacttatttatttg 38524098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 20174887 - 20175008
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||| ||||||||| |||| ||| ||||||||||||||||| |||| |||||||||||||| |||  ||| |||  ||    
T  20174887 cttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaactaacttagcaagttt 20174986  T
Q  295 ataaataatacattaatactta 316  Q
    ||||||||||||||||| ||||    
T  20174987 ataaataatacattaatgctta 20175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 328
Target Start/End: Original strand, 45049319 - 45049454
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| |||   ||||||||||||||||| ||| ||  || ||||||| ||||||||||| ||||||| |||||| |||  |||||||||    
T  45049319 aacttatgtaaataaataaatttttatgttaattcatatcatcttattaatgaaaattttatatttataagttgttttgtcataaactaccttaacaaac 45049418  T
Q  293 ttataaataatacattaatacttatttatttgtata 328  Q
    ||||||| |||| |||||| ||| ||||||||||||    
T  45049419 ttataaacaatatattaatgcttgtttatttgtata 45049454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 48816875 - 48816758
Alignment:
Q  174 ttagggcacgtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttc 273  Q
    |||||||  ||||||||||| ||||||||||||| ||||| |||| ||||||| ||| |||| ||| ||||||||||||||||| |||| |||||| |||    
T  48816875 ttagggcctgtttggattgagcttatgcaaataaataagcttttaagttaatttataagatcttaccaacgaaaattgtatattcataagttgtttattc 48816776  T
Q  274 ataagctattttaacaaa 291  Q
     ||| |||  ||||||||    
T  48816775 ttaaactaccttaacaaa 48816758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 353
Target Start/End: Complemental strand, 30383903 - 30383749
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||  |||||||||||||||| |||   ||  | |||||||||||||| |||  |||||||||||||| |||  |||||||| |||    
T  30383903 ttatgcaaataaataagtttttatgttaattcataagat---acttatgaaaattgtatattcataggttgttttttcataaactaccttaacaaattta 30383807  T
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaat 353  Q
    ||||||| |||||||| ||| |||||| | |||  ||  |||||||||| ||||||||    
T  30383806 taaataacacattaatgcttctttattcgcataaactattttgcataagctctaaaat 30383749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 1516032 - 1516205
Alignment:
Q  182 cgtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagcta 281  Q
    |||||||||||| |||||| |||||| ||||  ||||| |||||| ||| | ||  || || ||||||||||| |||||||| || |||| |||||  ||    
T  1516032 cgtttggattgagcttatgtaaataaataagtttttattttaatttataagttctcactaatgaaaattgtatctttataaactgattttccataaaata 1516131  T
Q  282 ttttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
      |||||||||||||||||||||||| |||  ||||||||||| ||| | |  |||| ||||| |||||||||||    
T  1516132 ccttaacaaacttataaataatacataaat-gttatttatttgaataagttattttgtataagctctaaaataag 1516205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 29614286 - 29614172
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || ||||| ||||||||||||| |||  |||| ||| ||||||||||||||| || ||||||||||||  ||| |||| |||  |    
T  29614286 aacgaaaattgtatcttcataaactgttttttcataaactaccttaaaaaa-ttataaataatacataaaaacttatttatttacataagctgttttata 29614188  T
Q  341 taagttctaaaataag 356  Q
    |||| |||||||||||    
T  29614187 taagctctaaaataag 29614172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 42956124 - 42956255
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    ||||||||||||||| ||||  |||||||||||| ||| | ||  || |||||||||||||| |||||||  |||||| |||||| ||| ||  ||||      
T  42956124 aacttatgcaaataaataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagt 42956223  T
Q  293 ttataaataatacattaatacttatttatttg 324  Q
    |||| |||||||||| || |||||||||||||    
T  42956224 ttatgaataatacataaaaacttatttatttg 42956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 10448849 - 10448751
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||| ||||||||||||| |||  ||||||| |||||||||||||||| ||  | |||||||||| ||| | || |||||||||| ||||||||||||    
T  10448849 ataaactgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctctaaaataagc 10448751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 37456431 - 37456508
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    |||||||||| |||||||||| ||||||||||| |||| |||| ||||||||||||||||||| || | ||||||||||    
T  37456431 aaaattgtatctttataaattattttttcataaactatcttaa-aaacttataaataatacataaaaatttatttattt 37456508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 51662877 - 51662800
Alignment:
Q  261 aaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttg 338  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||  |||| |||||||||| |||| ||||    
T  51662877 aaattattttttcataaactatcttaacaagcttataaataatacattaatgtttatctatttgtataagctgttttg 51662800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 3645395 - 3645280
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || || || ||||||||||||| |||  |||| ||| ||||||||||||||| || ||||||||||||  ||| |||| |||  |    
T  3645395 aacgaaaattgtatcttcatgaactgttttttcataaactaccttaaaaaa-ttataaataatacataaaaacttatttatttacataagctgttttata 3645297  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  3645296 taagctctaaaataagc 3645280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 45331242 - 45331354
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| | |||||||||||||||||| || | | | |||||||||||| || ||||  ||||||||||||| || | ||||||| |||    
T  45331242 cttatgcaaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgttttttcataaactgtcttaacaagctt 45331341  T
Q  295 ataaataatacat 307  Q
    ||  |||||||||    
T  45331342 atgcataatacat 45331354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 329
Target Start/End: Original strand, 30473145 - 30473224
Alignment:
Q  250 tgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatat 329  Q
    |||| ||| |||| |||||||||||||| |||  ||||||| ||||||||||||||||||||  ||||||||||| ||||    
T  30473145 tgtacattcataagttgttttttcataaactaccttaacaaccttataaataatacattaatgtttatttatttgcatat 30473224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 37243605 - 37243490
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || || ||||| ||||  || ||||| | ||||||||||| |||  ||||||| |||    
T  37243605 cttatgcaaataagtaagcttttatcttaattcataagttctcaccaatgaaaagtgtaccttcataaactattttttcataaactacgttaacaagctt 37243506  T
Q  295 ataaataatacattaa 310  Q
    ||||||||||||||||    
T  37243505 ataaataatacattaa 37243490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 357
Target Start/End: Original strand, 28741181 - 28741323
Alignment:
Q  215 tttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatact 314  Q
    ||||| |||||||||| | ||  || |||||||||||||  || ||||  ||||||||||||| ||| |||||||| ||||||| |||||||| ||        
T  28741181 tttatcttaattcataagttctcactaacgaaaattgtaccttcataatctgttttttcataaactactttaacaagcttataagtaatacataaaggaa 28741280  T
Q  315 tatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||| ||| |||| ||||||| |  ||||||||||||    
T  28741281 tatttatttgcataagctgttttgcatgaactctaaaataagc 28741323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 40240524 - 40240606
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || |||||||||||||| || |||| ||||||||||||||    
T  40240524 cttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcataa 40240606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 43971840 - 43971922
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    |||||||||| ||| || |||||||||||| |||||| |||||||||||||||| | ||||||| || ||  |||||||||||    
T  43971840 aacgaaaattttatcttcataaattgttttctcataaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 4257295 - 4257410
Alignment:
Q  243 cgaaaattgtatatttataaattgtttttt--cataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||| || ||||| ||||||||  ||||| |||  |||| ||||||||||||||||||| || ||||||||||||| ||| | || |||  |    
T  4257295 cgaaaattgtatcttcataaactgttttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataagttgttttata 4257393  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  4257394 taagctctaaaataagc 4257410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 24841423 - 24841496
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||||||||||| ||  | |||||||||||||  || | ||||||||||||| ||||||||||||    
T  24841423 ttaacaaacttataaataatatatacaaacttatttatttgcttaagttgctttgcataagctctaaaataagc 24841496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 20894595 - 20894480
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || || || |||||||||| || |||  |||| ||| ||||||||||||||| || ||||||||||||  ||| |||| |||  |    
T  20894595 aacgaaaattgtatcttcatgaactgttttttcaaaaactacattaaaaaa-ttataaataatacataaaaacttatttatttacataagctgttttata 20894497  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  20894496 taagctctaaaataagc 20894480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 328
Target Start/End: Original strand, 47403707 - 47403843
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgtttttt-cataagctattttaacaaa 291  Q
    ||||||||||||||| |||   |||||||||||| ||| |  |  || |||||||||||||| || ||||||| |||||| ||||| |||  || |||||    
T  47403707 aacttatgcaaataaataaatttttatgttaatttataagccctcacaaacgaaaattgtatcttcataaattattttttgcataaactacatttacaaa 47403806  T
Q  292 cttataaataatacattaatacttatttatttgtata 328  Q
     |||| |||||||| | || |||||||||||||||||    
T  47403807 tttatgaataatacctaaaaacttatttatttgtata 47403843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 19308091 - 19307978
Alignment:
Q  183 gtttggattgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctat 282  Q
    |||||| |||| | |||| |||||||||||  ||| || ||||||||| |||  ||| ||| ||||||||||||| |||  |||||||||||||| |||     
T  19308091 gtttggtttgagcctatgtaaataattaagttttt-tgctaattcataagattttactaacaaaaattgtatattcataggttgttttttcataaactac 19307993  T
Q  283 tttaacaaacttata 297  Q
     ||||||||||||||    
T  19307992 cttaacaaacttata 19307978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 356
Target Start/End: Original strand, 22809144 - 22809302
Alignment:
Q  199 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataa 298  Q
    ||||||||| ||||  |||||||||||||||| | || |   |||||||||||||| || ||||   |||||||||||| |||  || |||| ||||| |    
T  22809144 tgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcataaactaccttgacaagcttatga 22809243  T
Q  299 ataatacattaata-cttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||| || || | |||||||||||| ||| |||| |||||||||  || ||||||||    
T  22809244 ataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataag 22809302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 40581023 - 40581173
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattg-ttttttcataagctattttaacaaact 293  Q
    ||||||||||||| ||||  |||||||||||||||| | ||  || |||||||||||| | || |||   || ||||||||||| |||  || |||| ||    
T  40581023 cttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactaccttgacaagct 40581122  T
Q  294 tataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    ||| |||||||||| ||  |||||||||||| ||| | || ||||||||||    
T  40581123 tattaataatacataaaagcttatttatttgcataagttgttttgcataag 40581173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 7292755 - 7292659
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||| ||||||||||||| |||| || |||||||||| |||||||||| |   ||||| |||||| ||| | |||||| ||||||||| ||||||||    
T  7292755 ataaactgttttttcataaactatattgacaaacttatgaataatacataagagcttatgtatttgcataagttgctttacataagttc-aaaataag 7292659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 29830793 - 29830878
Alignment:
Q  271 ttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||| |||  ||||||||| |||| ||||||||| || ||||||||||||| |||  ||| |||| ||||| |||||||||||    
T  29830793 ttcataaactaccttaacaaacatatagataatacataaaaacttatttatttgcataaactgttttgtataagctctaaaataag 29830878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 53787699 - 53787811
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  ||||| |||||||||| | ||  |  ||| |||||| ||| |||||||| ||||||||| ||| |||| |||| || |||    
T  53787699 cttatgcaaataaataagtttttatcttaattcataagttctcaataacaaaaattatatctttataaactgttttttcgtaaactatattaaaaagctt 53787798  T
Q  295 ataaataatacat 307  Q
    |||| ||||||||    
T  53787799 ataagtaatacat 53787811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 29270454 - 29270339
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || ||||  |||||||||||||  ||| || | || ||||| |||||||||| ||  ||||||||||  |||| | || ||||||    
T  29270454 aacgaaaattgtatcttcataagctgttttttcataaattatcttgaaaagcttatgaataatacataaaagcttatttattcctataagttgttttgca 29270355  T
Q  341 taagttctaaaataag 356  Q
    |||| || ||||||||    
T  29270354 taagctcaaaaataag 29270339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 43376786 - 43376719
Alignment:
Q  243 cgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaa 310  Q
    |||||||||||  |||||||||  |||| |||||| |||  ||||||| |||||||||||||||||||    
T  43376786 cgaaaattgtacctttataaataattttatcataaactacattaacaagcttataaataatacattaa 43376719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 53218033 - 53218136
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || | || |||||||||||||| |||  || |||| ||||| |||||||||| ||  |||||||||| | ||| | || ||||||    
T  53218033 aacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatacataaaatcttatttattcgcataagttgttttgca 53218132  T
Q  341 taag 344  Q
    ||||    
T  53218133 taag 53218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 30500010 - 30499944
Alignment:
Q  290 aacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    |||||||||||||||||| || | ||||||||||| |||  ||| |||| ||||| |||||||||||    
T  30500010 aacttataaataatacataaaaatttatttatttgcataaactgttttgtataagctctaaaataag 30499944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 3845993 - 3845956
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatg 232  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  3845993 cttatgcaaataaataagcttttatgttaattcatatg 3845956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 36266294 - 36266221
Alignment:
Q  284 ttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||||||||||||||| ||   ||||||||||| |||  ||| |||  ||||| ||||||||||||    
T  36266294 ttaacaaacttataaataatacataaaagtttatttatttgcataaactgttttatataagctctaaaataagc 36266221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 359
Target Start/End: Original strand, 2086690 - 2086802
Alignment:
Q  247 aattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagtt 346  Q
    |||||||| || ||||| | ||||||||||| | |  || ||||  ||||||||||||||| ||   ||||||||||  ||| |||| || ||||||| |    
T  2086690 aattgtatcttcataaactattttttcataaaccacctttacaagattataaataatacataaaagtttatttatttacataagctgtttagcataagct 2086789  T
Q  347 ctaaaataagcca 359  Q
    |||||||||||||    
T  2086790 ctaaaataagcca 2086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 230 - 356
Target Start/End: Complemental strand, 1398 - 1272
Alignment:
Q  230 atgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatat 329  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||| |||||| |||||| ||||| |||     
T  1398 atgatcttactaacgaaaattgtatatttataacttgttttttcataaactaccttaacaaacttataaataatatattaatccttattcatttgcataa 1299  T
Q  330 gctgctttgcataagttctaaaataag 356  Q
    | || |||||||||| |||||||||||    
T  1298 gttgttttgcataagctctaaaataag 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 200 - 359
Target Start/End: Complemental strand, 24439153 - 24438994
Alignment:
Q  200 gcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaa 299  Q
    |||||| ||||||| ||||| |||||| ||| |||| ||  ||| |||||||||| ||||||| |||||||||||||| |||   ||||||  |||||||    
T  24439153 gcaaattattaagcatttatcttaatttataagatcttattaacaaaaattgtatgtttataagttgttttttcataaactaccgtaacaagattataaa 24439054  T
Q  300 taatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||||||||  |||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  24439053 taatacattaatgtttatatatttgcatatgttgctttgcataagctctaaaataagcca 24438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 12238434 - 12238559
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    ||||| |||||||||||| |||||||||||||||| |||| ||| |||||||||||||| || ||||   |||||||||||| |||  ||||||| ||||    
T  12238434 ttatgaaaataattaagcatttatgttaattcataagatcttactaacgaaaattgtatgttcataa---gttttttcataaactaccttaacaagctta 12238530  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    |||||||||||||||| ||||||||||||    
T  12238531 taaataatacattaatgcttatttatttg 12238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 343
Target Start/End: Complemental strand, 21788598 - 21788448
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    ||||||||||||||| ||||| ||||| |||||||||| | ||  || |||||||||| ||| || |||| |||||||||||||| |||| ||||||| |    
T  21788598 aacttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttgttttttcataaactatcttaacaagc 21788499  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataa 343  Q
    |||| ||||||| || ||  |||||||||||| ||| | || |||||||||    
T  21788498 ttatgaataataaataaaagcttatttatttgcataagatgttttgcataa 21788448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 16108069 - 16108178
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||||||||| |||||||||||||||| |||   |  ||| ||||||||||||| |||| |||||||||||||| |||  |||||||||||    
T  16108069 cttatgtaaataattaagcgtttatgttaattcataagatttaattaacaaaaattgtatattcataagttgttttttcataaactaccttaacaaactt 16108168  T
Q  295 ataaataata 304  Q
    ||||||||||    
T  16108169 ataaataata 16108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 27881008 - 27881106
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||| |  || |||||||||| ||| |||  |||||||||| ||||||||||||    
T  27881008 ataaattgttttttcataagctaccttaataaacttataaataatacataataacatatttatttgcataagctattttgcataagctctaaaataagc 27881106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 34913397 - 34913486
Alignment:
Q  255 atttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||| |||||||||||||| |||| ||||||||||||| |||||||||| ||  |||||||||||| ||| |||| ||||||||||    
T  34913397 atttataagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcataag 34913486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 12950064 - 12950138
Alignment:
Q  197 tatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttt 271  Q
    ||||||||||||||||| |||||||||||||||| |||| ||| |||||||||| |||||| |||| ||||||||    
T  12950064 tatgcaaataattaagcttttatgttaattcataagatcttactaacgaaaattctatattcataagttgttttt 12950138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 359
Target Start/End: Complemental strand, 4027064 - 4026901
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| |||||  ||||||||||||||| | ||  || ||| |||||||||| || ||||  ||||||||||||| |||  || |||| |||    
T  4027064 cttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctt 4026965  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||  ||||||||| ||  |||||||||||| ||| || | |||||||||| || |||||||||||    
T  4026964 at-gataatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataagcca 4026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 8441536 - 8441456
Alignment:
Q  271 ttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaa 351  Q
    ||||||| |||  |||||||||||||||||||||||| || || |||||||||| ||| ||||||||||||||| ||||||    
T  8441536 ttcataaactacattaacaaacttataaataatacataaaaacatatttatttgcataagctgctttgcataagctctaaa 8441456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 32366288 - 32366127
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||| ||| | ||| || ||| | || ||| ||||||||| ||||||| ||||| ||||||||||||| |||  || | ||||||    
T  32366288 cttatgtaaataaataagcttttgttttattttataagctcttactaacgaaaatcgtatattcataaactgttttttcataaactaccttta-aaactt 32366190  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| ||| | |  |||  ||||| ||||||||||||    
T  32366189 ataaataatacataaaaacttatttatttgcataagttattttatataagctctaaaataagc 32366127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 43797003 - 43796941
Alignment:
Q  261 aaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttattt 323  Q
    ||||||| | ||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  43797003 aaattgtatattcataaactaccttaacaaacttataaataatacattaatacttatttattt 43796941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 32521993 - 32522152
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  | ||| |||||| ||| | || ||| |||||||||||||| || || || ||||||||||||| |||  |||| ||| ||    
T  32521993 cttatgtaaataaataagtttatattttaatttataagctcttactaacgaaaattgtatcttcatgaactgttttttcataaactaccttaaaaaa-tt 32522091  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    ||||||||||||| || ||||||||||||  ||| |||| |||  ||||| ||||||||||    
T  32522092 ataaataatacataaaaacttatttatttacataagctgttttatataagctctaaaataa 32522152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 2757088 - 2757177
Alignment:
Q  265 tgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||| || ||||||||||||| ||| |||| |||  ||||| |||||||||||    
T  2757088 tgttttttcataaactactttaa-aaacttataaataatacataaa-acttatttatttgcataagctgttttatataagctctaaaataag 2757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 5516220 - 5516102
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattg-ttttttcataagctattttaac 288  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||| | ||  || |||||||||||||| |||||||| || ||||||||||| |||  || ||    
T  5516220 ttgagcttatgcaaataaataagcttttgtgttaatttataagctctcactaacgaaaattgtatttttataaactgtttttttcataaactacatttac 5516121  T
Q  289 aaacttataaataatacat 307  Q
    |||||||| ||||| ||||    
T  5516120 aaacttatgaataacacat 5516102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 33321259 - 33321388
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||| |||||||||||||||| | | ||  || ||| |||||||||| || ||||  ||||||||||||| |||  || |||| |||    
T  33321259 cttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctt 33321358  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    || ||||| |||| ||  ||||||||||||    
T  33321359 atgaataagacataaaagcttatttatttg 33321388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 356
Target Start/End: Complemental strand, 38216158 - 38216001
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||| ||||| | ||  || |||||||||||||| || |||   | ||||||| ||| |||  || |||| |||    
T  38216158 cttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatcttcatatgctattttttcctaaactaccttgacaagctt 38216059  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    || ||||||||    ||| ||||||||||| ||| |||| |||||||||| || ||||||||    
T  38216058 atgaataatac----ataattatttatttgcataagctgttttgcataagctcaaaaataag 38216001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 40301397 - 40301329
Alignment:
Q  289 aaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||||||||| || ||||||||||||| ||| |||| |||  ||||| ||||||||||||    
T  40301397 aaacttataaataatacataaaaacttatttatttgcataagctgttttttataagctctaaaataagc 40301329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 42064995 - 42064881
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| ||||||||||||| ||||| ||||| |||||||||| | || ||| |||||||||  ||| || |||| || |||||| |||| |||  ||||||    
T  42064995 ttgagcttatgcaaataaataagcttttatattaattcataagttcttactaacgaaaatgatatcttcataagttatttttttataaactaccttaaca 42064896  T
Q  290 aacttataaataata 304  Q
    | ||||| |||||||    
T  42064895 agcttatgaataata 42064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 23956211 - 23956312
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  |||||||||||| ||| | ||  |  |||||||||||||| |||||||| ||||||| ||||| |||  || ||||||||    
T  23956211 cttatgcaaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatctttataaactgtttttccataaactacatttacaaactt 23956310  T
Q  295 at 296  Q
    ||    
T  23956311 at 23956312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 36501462 - 36501583
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||  | ||  || |||| ||||| ||| || ||||  ||||||||||||| |||  || |||| |||    
T  36501462 cttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcataaactaccttgacaagctt 36501561  T
Q  295 ataaataatacattaatactta 316  Q
    || |||||||||| || |||||    
T  36501562 atgaataatacataaaaactta 36501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 357
Target Start/End: Original strand, 38471759 - 38471900
Alignment:
Q  216 ttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatactt 315  Q
    |||| |||||||||| | ||  || |||||||||||||  || ||||| ||||||||||||| |||  | || || |||||| |||| |||| ||  | |    
T  38471759 ttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacatcaagaagcttatacataacacataaaagcat 38471858  T
Q  316 atttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||| ||| |||| |||||||||| || |||||||||    
T  38471859 atttatttgcataagctgttttgcataagctcgaaaataagc 38471900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 29774879 - 29774755
Alignment:
Q  200 gcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaa 299  Q
    |||||||| ||||| |||| ||||||||||| | ||  || |||||||||||||| || ||||   |||||||||||| |||  |||||||||| || ||    
T  29774879 gcaaataaataagcttttacgttaattcataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaa 29774780  T
Q  300 taatacattaatacttatttatttg 324  Q
    |||| ||| ||   |||||||||||    
T  29774779 taatgcataaaagtttatttatttg 29774755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 35515503 - 35515591
Alignment:
Q  271 ttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    ||||||| |||  |||||||||||||||||||||||| || || |||||||||   ||  ||| ||| |||||| ||||||||||||||    
T  35515503 ttcataaactacattaacaaacttataaataatacataaagacatatttatttacgtaaactgttttacataagctctaaaataagcca 35515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 16108511 - 16108570
Alignment:
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    |||||||||||||||| |||||||||||| ||| | |||||| |||||  ||||||||||    
T  16108511 taaataatacattaatgcttatttatttgcataagttgctttacataaactctaaaataa 16108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 43787800 - 43787883
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    |||||||||| || |||| ||||||||||||||||||  | |||||  |||| |||||||||| ||   |||||||||||||||    
T  43787800 aaaattgtatcttcataagttgttttttcataagctacctaaacaagtttatgaataatacataaaagtttatttatttgtata 43787883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 8832596 - 8832514
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    ||||||||||||| ||||| |||||||||||||||| | |   || |||||||||||||| ||| |||  ||| |||||||||    
T  8832596 cttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctttctaacctgtgttttcataa 8832514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 25836660 - 25836803
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||||||| |||||| | ||  || ||||| |||||| | || ||||   |||||||||||| |||  || |||| |||    
T  25836660 cttatgcaaataaataagcttttatgtta-ttcataagttctcactaacgataattgtgtcttcataagccgttttttcataaactaccttgacaagctt 25836758  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgc 339  Q
    || |||||||||| ||  | |||||||||| ||| |||| |||||    
T  25836759 atgaataatacataaaagcatatttatttgcataagctgttttgc 25836803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 227842 - 227718
Alignment:
Q  199 tgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattg-ttttttcataagctattttaacaaacttata 297  Q
    |||||| |||||||| |||||||||||||||| |||| ||| ||||||||||||||||| ||||  || ||||||||||| |||  ||||||||||||||    
T  227842 tgcaaagaattaagcttttatgttaattcataagatcttactaacgaaaattgtatattcataagctgtttttttcataaactaccttaacaaacttata 227743  T
Q  298 aataatacattaatacttatttatt 322  Q
    |||| ||||||||| ||||||||||    
T  227742 aatactacattaatgcttatttatt 227718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 359
Target Start/End: Original strand, 8010992 - 8011157
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgtttttt--cataagctattttaacaaac 292  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||| ||||||||||||||||| |||| || ||||||  || || |||  || ||||||    
T  8010992 cttatgcaaataattaagcttttatgtta-ttcataagatcttactaacgaaaattgtatattcataagtttttttttttcaaaaactaccttgacaaac 8011090  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcca 359  Q
    |||||||||||| |||||| |||||||||||  ||  ||| || | |||||| ||||||||||||||    
T  8011091 ttataaataatatattaatgcttatttattttcattagctactgtacataagctctaaaataagcca 8011157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 356
Target Start/End: Complemental strand, 10619360 - 10619207
Alignment:
Q  205 taattaagcctttatgttaattcatatgatcgtacgaacgaaaatt----gtatatttataaattgttttttcataagctattttaacaaacttataaat 300  Q
    ||||||||  |||||||||||||||| |||| ||| ||||||| ||    ||||||| |||| |||||||||||||| |||  |||||||||||| ||||    
T  10619360 taattaagtttttatgttaattcataagatcttactaacgaaatttatttgtatattcataagttgttttttcataaactaccttaacaaacttacaaat 10619261  T
Q  301 aatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||| |  ||||||||| ||| |||||||| |||||| |||||||||||    
T  10619260 aatacattaatgc--atttatttgcataagctgctttacataagctctaaaataag 10619207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 357
Target Start/End: Original strand, 10184284 - 10184438
Alignment:
Q  202 aaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaata 301  Q
    |||||| ||||| ||||| |||||| ||| | || ||| |||||||||||| | || ||||||||||||||||||| |||  |||| |||||||||||||    
T  10184284 aaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataaattgttttttcataaactaccttaa-aaacttataaata 10184382  T
Q  302 atacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||| || || ||||||||||||  ||| |||| |||  ||||| ||||||||||||    
T  10184383 atagataaaaacttatttatttacataagctgttttatataagctctaaaataagc 10184438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 356
Target Start/End: Original strand, 32615360 - 32615522
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| ||||| ||||| |||||| ||||| ||  || |||||||||||||| || |||||| |||||||||| | |||  |||| |||     
T  32615360 aacttatgtaaataagtaagcttttattttaatttatatgctctcactaacgaaaattgtatcttcataaatagttttttcatcaactaccttaa-aaat 32615458  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataag 356  Q
    ||||||||||||||| || ||||||||||||| ||| |||| |||  ||||| | |||||||||    
T  32615459 ttataaataatacataaaaacttatttatttgcataagctgttttatataagctataaaataag 32615522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 350
Target Start/End: Original strand, 21609997 - 21610151
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||  ||||| |||||| ||| | || ||| |||||||||| |||||| ||||| | ||||||||||| |||  ||||||| ||||    
T  21609997 ttatgcaaataaataagtttttattttaatttataagttcttactaacgaaaattatatattcataaactattttttcataaactacattaacaagctta 21610096  T
Q  296 taaataatacattaatacttatttatttgtatatgctgctttgcataagttctaa 350  Q
    |||||||| ||| || |  |||||||||| ||| |||| |||||||||| |||||    
T  21610097 taaataattcataaagaaatatttatttgcataagctgttttgcataagctctaa 21610151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 4808664 - 4808549
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||| ||||||| || ||||| ||||||||||||| |||| |||| ||||||||||||||||||| || ||| ||||||||| ||| |||| |||  |    
T  4808664 aacgaatattgtatcttcataaactgttttttcataaactatcttaa-aaacttataaataatacatgaaaactcatttatttgcataagctgttttata 4808566  T
Q  341 taagttctaaaataagc 357  Q
    |||| ||||||||||||    
T  4808565 taagctctaaaataagc 4808549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 2034176 - 2034305
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||| | ||||| | |  |||  ||||||||||||| ||  ||| |||||||||||||| |||  || ||||||||    
T  2034176 cttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgttttttcataaactaccttgacaaactt 2034275  T
Q  295 ataaataatacattaatacttatttatttg 324  Q
    ||||||||||||| ||  ||||||||||||    
T  2034276 ataaataatacataaaagcttatttatttg 2034305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 32165208 - 32165335
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  ||||| |||||| ||| | ||  || |||||||||||||| || ||||| ||||||||||||| ||| ||||| ||| ||    
T  32165208 cttatgtaaataaataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactactttaa-aaaatt 32165306  T
Q  295 ataaataatacattaatacttatttattt 323  Q
    ||||||||||||| || ||||||||||||    
T  32165307 ataaataatacataaaaacttatttattt 32165335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 21891285 - 21891443
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||| ||| | ||||| |||||||||||||||| | || | |||||||||||| ||| || |||| ||||| |||||||| |||  || |||| |||    
T  21891285 cttatgcgaatgaataagcttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttatttcataaactacattgacaagctt 21891384  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaat 353  Q
    || ||||||| || || ||||||||||||| ||| |||  | |||||||| || |||||    
T  21891385 atgaataatatatcaaaacttatttatttgcataagctattctgcataagctcaaaaat 21891443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 34413408 - 34413346
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacat 307  Q
    |||||||||| |||||||||||||||||||||| |||  || |||||||||||||||||||||    
T  34413408 aaaattgtatgtttataaattgttttttcataaactacatttacaaacttataaataatacat 34413346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 29623425 - 29623573
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||  |||||||||||||||| | ||  || |||||||| | ||| || |||| |||||||||||||| |||  ||||||||||     
T  29623425 cttatgcaaataaataaga-tttatgttaattcataagttctcactaacgaaaactttattttcataagttgttttttcataaactacattaacaaactc 29623523  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||| || ||   ||||||||||| ||| | || ||||||||||    
T  29623524 ataaataataaataaaaggttatttatttgcataagttgttttgcataag 29623573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 15054578 - 15054654
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttat 317  Q
    |||||||||||||| || |||||||| ||||||||||  || ||| |||||||||||| |||||||| || ||||||    
T  15054578 aacgaaaattgtatcttcataaattgctttttcataaaatacttttacaaacttataactaatacatgaaaacttat 15054654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 2255875 - 2255744
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaac 292  Q
    |||||||| |||||| ||||| |||||||||||||||||| ||  || | | |||||||||| || ||||  |||||||||||||  ||  ||||||| |    
T  2255875 aacttatgtaaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagc 2255776  T
Q  293 ttataaataatacattaatacttatttatttg 324  Q
    |||| ||| |||||| ||  || |||||||||    
T  2255775 ttatgaatcatacataaaagctcatttatttg 2255744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 22816578 - 22816661
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||| |||||||||| ||||||| |||||||||||||  ||| || | |||||||| |||| ||||| || |||||||||||||    
T  22816578 aacggaaattgtatacttataaactgttttttcataaattatatttaaaaacttatgaatattacataaaaacttatttatttg 22816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 357
Target Start/End: Complemental strand, 1468313 - 1468153
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    |||||| |||||| ||||  ||||| |||||| ||| | || ||| ||||||||| || | || ||||| ||||||| ||||| |||  |||| |||| |    
T  1468313 cttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataaactgttttt-cataaactaccttaa-aaacct 1468216  T
Q  295 ataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    ||||||||||||| || ||||||||||||| ||| |||  |||  ||||| ||||||||||||    
T  1468215 ataaataatacataaaaacttatttatttgcataagctattttatataagctctaaaataagc 1468153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 333
Target Start/End: Original strand, 2027123 - 2027261
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||  ||| | |||||||||||||||| | || ||| ||| ||| |||||| || ||||  ||||||||||||| || | || ||||||||    
T  2027123 cttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaactgtcttgacaaactt 2027222  T
Q  295 ataaataatacattaatacttatttatttgtatatgctg 333  Q
     | |||||| ||| ||  |||||||||||| ||| ||||    
T  2027223 ctgaataatgcataaaagcttatttatttgcataagctg 2027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 6632734 - 6632636
Alignment:
Q  259 ataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||| |||||||||||||| |||  |||||||  ||||||||||||||| ||  | |||||||||| ||| | || |||| ||||| ||||||||||||    
T  6632734 ataagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataagttgttttgaataagctctaaaataagc 6632636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 10755231 - 10755356
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| ||||| |||||||||||||||| | || ||| ||||||||||||   || ||||  | |||||||||||| ||  || |||| ||||    
T  10755231 ttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaattgt---ttcataagctattttttcataagttaccttgacaagctta 10755327  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | |||||||| | ||  ||||||||||||    
T  10755328 tgaataatacgtaaaagcttatttatttg 10755356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 34223522 - 34223632
Alignment:
Q  245 aaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataag 344  Q
    |||||||||| || ||||| |||||||| |||   ||| | ||||||||||||||||| |||| || ||||||||||||  ||| | || |||  |||||    
T  34223522 aaaattgtatcttcataaactgtttttttatagaatatataaacaaacttataaataacacataaaaacttatttattttcataagttgttttatataag 34223621  T
Q  345 ttctaaaataa 355  Q
    |||||||||||    
T  34223622 ttctaaaataa 34223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 10874123 - 10874014
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| |||||||||||||||| | |   || ||| |||||||||| || ||||  |||||| |||||| |||  ||||||| |||    
T  10874123 cttatgcaaataaataagcttttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagctt 10874024  T
Q  295 ataaataata 304  Q
    || |||||||    
T  10874023 attaataata 10874014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 16589886 - 16589778
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||| |||||||   |||||||||||||| | ||  |  |||||||||  ||| || ||||||||||||||||||| ||  ||| |||||||||    
T  16589886 ttatgcaaatgattaagc---tatgttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaactta 16589790  T
Q  296 taaataatacat 307  Q
    | ||||||||||    
T  16589789 tgaataatacat 16589778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 307
Target Start/End: Original strand, 16605494 - 16605602
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||| |||||||   |||||||||||||| | ||  |  |||||||||  ||| || ||||||||||||||||||| ||  ||| |||||||||    
T  16605494 ttatgcaaatgattaagc---tatgttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaactta 16605590  T
Q  296 taaataatacat 307  Q
    | ||||||||||    
T  16605591 tgaataatacat 16605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 4272475 - 4272392
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||||||||||| | ||||||||||||||||| |||| |||  || | ||||||||  ||||||||| || | |||||||||||    
T  4272475 aacgaaaattgtttctttataaattgtttttttataaactacatttataaacttatgtataatacataaaaagttatttatttg 4272392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 10054523 - 10054391
Alignment:
Q  190 ttgaacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaaca 289  Q
    |||| ||||||||||||| || || |||||| |||||  || | ||  || || ||||||||  ||| |||||||| ||||||||||| |||  || |||    
T  10054523 ttgagcttatgcaaataaataggcttttatgctaatttgtaagttcccactaatgaaaattg--tatctataaattattttttcataaactacatttaca 10054426  T
Q  290 aacttataaataatacattaatacttatttatttg 324  Q
    ||||||| |||||||||| ||  ||||||||||||    
T  10054425 aacttatgaataatacataaaagcttatttatttg 10054391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 10730249 - 10730312
Alignment:
Q  256 tttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttattt 319  Q
    |||||||| ||||||||||||| |||  |||||||  ||||||||||||||| |||| ||||||    
T  10730249 tttataaactgttttttcataaactacattaacaagtttataaataatacataaatatttattt 10730312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 17915038 - 17914924
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgca 340  Q
    |||||||||||||| || ||||    ||||||||||| |||  |||| ||||||||||||||||||| || |  |||||||||| ||| |||| |||  |    
T  17915038 aacgaaaattgtattttcataacccattttttcataaactaccttaa-aaacttataaataatacataaaaatgtatttatttgcataagctgttttata 17914940  T
Q  341 taagttctaaaataag 356  Q
    |||| |||||||||||    
T  17914939 taagctctaaaataag 17914924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 29052426 - 29052339
Alignment:
Q  241 aacgaaaattgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtata 328  Q
    ||||| ||||||||  | ||||| |||||||||||||  ||  |||||||||||||||||||||||| ||   |||||| ||||||||    
T  29052426 aacgagaattgtatcatcataaactgttttttcataaaataccttaacaaacttataaataatacataaaagtttatttttttgtata 29052339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 9894833 - 9894743
Alignment:
Q  267 ttttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagc 357  Q
    |||||||||||  ||  |||||||||||||||||||||||| ||   |||||||||||  || |||| |||| ||||| || |||||||||    
T  9894833 ttttttcataaaataccttaacaaacttataaataatacataaaagattatttatttgcgtaagctgttttgtataagctcgaaaataagc 9894743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 30534046 - 30533957
Alignment:
Q  268 tttttcataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataagcc 358  Q
    |||||||||| |||  || |||||||||| |||||||||| ||  |||||||||||| ||| |||| |||||| ||| || ||||||||||    
T  30534046 tttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcacaagctc-aaaataagcc 30533957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 23239386 - 23239253
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||||| ||||| ||||| |||||||||| | ||  || || |||| ||||||  | |||| ||| ||||| |||| | |  ||||||| |||    
T  23239386 cttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgctttttgataaaccacgttaacaagctt 23239287  T
Q  295 ataaataatacattaatacttatttatttgtata 328  Q
    || ||||||| || ||  ||||||||||||||||    
T  23239286 atgaataataaataaaagcttatttatttgtata 23239253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 32675834 - 32675918
Alignment:
Q  193 aacttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataa 277  Q
    ||||||||||||||| ||||  ||||| |||||||||| | ||  || || ||||||||||| || |||| || |||||||||||    
T  32675834 aacttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcataa 32675918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 328
Target Start/End: Original strand, 14692 - 14826
Alignment:
Q  194 acttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaact 293  Q
    |||||||||||||| ||||| || ||||||||| ||| | ||  || ||||||||||||||||||||||| || |||||||||| |||  || | |||||    
T  14692 acttatgcaaataaataagctttcatgttaatttataagttctcactaacgaaaattgtatatttataaactgatttttcataaactacatttaaaaact 14791  T
Q  294 tataaataatacattaatacttatttatttgtata 328  Q
    ||| |||||||||| ||  ||||||||||||||||    
T  14792 tatgaataatacataaaagcttatttatttgtata 14826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 4203 - 4076
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactt 294  Q
    ||||||||||| | | ||| |||||||||||| ||| | ||  || |||||||||||||| |  ||||  | ||||||||||| |||| || |||| |||    
T  4203 cttatgcaaatcaatgagcttttatgttaatttataagttcccactaacgaaaattgtat-tacataagctattttttcataaactatctttacaagctt 4105  T
Q  295 ataaataatacattaatacttatttattt 323  Q
    ||||||||||||||||  |||||||||||    
T  4104 ataaataatacattaaagcttatttattt 4076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 355
Target Start/End: Complemental strand, 24886 - 24724
Alignment:
Q  195 cttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagcta--ttttaacaaac 292  Q
    ||||||||||||| ||||  |||||||||||| ||| | ||  || || ||| ||||||| || || |  ||||||||||||| |||  |||| |||| |    
T  24886 cttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagc 24787  T
Q  293 ttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaataa 355  Q
    |||| |||||||||| ||  |||||||||||| ||| |||| ||||| |||| | ||||||||    
T  24786 ttatgaataatacataaaagcttatttatttgcataagctgttttgcttaagctataaaataa 24724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 178594 - 178478
Alignment:
Q  241 aacgaaaattgtatatttataaattgtttttt-cataagctattttaacaaacttataaataatacattaatacttatttatttgtatatgctgctttgc 339  Q
    |||||||||||||| || ||||| | |||||| |||||  ||  |||| ||||||||||||||||||| ||  |||||||||||| ||| | || || |     
T  178594 aacgaaaattgtatcttcataaactatttttttcataaaataccttaagaaacttataaataatacataaaagcttatttatttgcataagttgtttagt 178495  T
Q  340 ataagttctaaaataag 356  Q
    |||||||| ||||||||    
T  178494 ataagttcaaaaataag 178478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 278993 - 279067
Alignment:
Q  249 ttgtatatttataaattgttttttcataagctattttaacaaacttataaataatacattaatacttatttatttg 324  Q
    |||||| ||||||||| |||||||||||| |||  |||| ||||||||||||||||||| || | |||| ||||||    
T  278993 ttgtatctttataaatggttttttcataaactaccttaa-aaacttataaataatacataaaaatttatgtatttg 279067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 108944 - 109068
Alignment:
Q  196 ttatgcaaataattaagcctttatgttaattcatatgatcgtacgaacgaaaattgtatatttataaattgttttttcataagctattttaacaaactta 295  Q
    |||||||||||| |||| || |||||||||||||||  || ||| |||||||||||||| || |||| |  ||||||||||| | |  || |||| ||||    
T  108944 ttatgcaaataaataaggctgtatgttaattcatat--tcttactaacgaaaattgtatcttcataagt--ttttttcataaaccaccttgacaagctta 109039  T
Q  296 taaataatacattaatacttatttatttg 324  Q
    | | |||||||| ||  ||||||||||||    
T  109040 tgagtaatacataaaggcttatttatttg 109068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 59313 - 59249
Alignment:
Q  289 aaacttataaataatacattaatacttatttatttgtatatgctgctttgcataagttctaaaat 353  Q
    ||||||||||||||||| | || ||||||||||||| ||| |||| |||  ||||| ||||||||    
T  59313 aaacttataaataatacttaaaaacttatttatttgcataagctgttttatataagctctaaaat 59249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University