View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16459_low_6 (Length: 289)
Name: NF16459_low_6
Description: NF16459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16459_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 50503261 - 50502994
Alignment:
| Q |
1 |
aaaaaacatattatcacttttaattttaaaataaaaatggataagttgtgaagaatatattaaaatnnnnnnngggttggcagttagtaatattaattta |
100 |
Q |
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| T |
50503261 |
aaaaaacatattatcacttttaattttaaaataaaaatggataagttgtgaagaatatattaaaataaaataagggttggcagttagtaatattaattta |
50503162 |
T |
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| Q |
101 |
attaaaatgactttaccaagctcaaagagacgagaaagcacgtgacagacaagttggtggacgttaaattcgcatactttcttaccccataaataccaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50503161 |
attaaaatgactttaccaagctcaaagagacgagaaagcacgtgacagacaagttggtggacgttaaattcgcatactttcttaccccataaataccaac |
50503062 |
T |
|
| Q |
201 |
cttttctcaactggaataccccacgccttacccgagggaaatagaaaacaaaatccatagaagaagaa |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50503061 |
cttttctcaactggaataccccacgccttacccgagggaaatagaaaacaaaatccatagaagaagaa |
50502994 |
T |
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