View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1645_low_11 (Length: 291)

Name: NF1645_low_11
Description: NF1645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1645_low_11
NF1645_low_11
[»] chr7 (24 HSPs)
chr7 (23-279)||(18873164-18873420)
chr7 (28-279)||(15167979-15168230)
chr7 (32-279)||(10895795-10896042)
chr7 (24-279)||(14422789-14423043)
chr7 (17-279)||(12709833-12710095)
chr7 (17-279)||(13122904-13123166)
chr7 (28-279)||(16009382-16009631)
chr7 (17-267)||(13743526-13743774)
chr7 (17-236)||(12590633-12590850)
chr7 (17-236)||(13007281-13007497)
chr7 (30-224)||(16677152-16677348)
chr7 (30-224)||(17651388-17651584)
chr7 (17-83)||(21230949-21231015)
chr7 (28-83)||(11382871-11382926)
chr7 (28-83)||(11389348-11389403)
chr7 (17-83)||(20311039-20311107)
chr7 (28-147)||(13679428-13679548)
chr7 (27-82)||(2971254-2971309)
chr7 (27-82)||(20906461-20906516)
chr7 (28-82)||(11311059-11311113)
chr7 (22-63)||(831628-831669)
chr7 (22-63)||(1196808-1196849)
chr7 (22-63)||(34958578-34958619)
chr7 (28-84)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (23-279)||(22750945-22751201)
chr5 (16-279)||(38144525-38144786)
chr5 (28-279)||(28370055-28370304)
chr5 (28-279)||(19512191-19512441)
chr5 (23-236)||(23528479-23528690)
chr5 (28-92)||(18407944-18408008)
chr5 (17-83)||(22438736-22438803)
chr5 (28-92)||(23111200-23111264)
chr5 (27-82)||(19236900-19236955)
chr5 (16-142)||(34830024-34830150)
chr5 (16-83)||(42961566-42961633)
chr5 (27-80)||(22461158-22461211)
chr5 (27-80)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (28-279)||(14762758-14763009)
chr3 (30-277)||(38310802-38311049)
chr3 (30-260)||(20247791-20248021)
chr3 (30-267)||(24192771-24193009)
chr3 (28-279)||(9534133-9534382)
chr3 (27-279)||(23370505-23370756)
chr3 (30-279)||(55499104-55499353)
chr3 (27-279)||(24933828-24934077)
chr3 (17-236)||(41455087-41455304)
chr3 (17-196)||(16801457-16801635)
chr3 (28-89)||(18929239-18929300)
chr3 (28-92)||(17240513-17240577)
chr3 (27-82)||(13302240-13302295)
chr3 (27-82)||(13323787-13323842)
chr3 (27-141)||(10389443-10389557)
chr3 (27-141)||(10414532-10414646)
chr3 (27-141)||(10421202-10421316)
chr3 (27-82)||(12033444-12033499)
chr3 (27-82)||(13312896-13312951)
chr3 (27-82)||(17131732-17131787)
chr3 (27-82)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (17-279)||(11840-12102)
scaffold0026 (27-279)||(111491-111741)
[»] chr6 (23 HSPs)
chr6 (28-261)||(23057760-23057993)
chr6 (17-279)||(29614136-29614398)
chr6 (28-279)||(23839003-23839253)
chr6 (17-279)||(10986170-10986431)
chr6 (28-263)||(4477678-4477912)
chr6 (17-279)||(18800242-18800503)
chr6 (17-162)||(930085-930229)
chr6 (30-279)||(21565214-21565462)
chr6 (17-236)||(12168212-12168428)
chr6 (17-236)||(19287121-19287337)
chr6 (17-236)||(19785859-19786075)
chr6 (17-236)||(19878305-19878521)
chr6 (17-236)||(19884081-19884297)
chr6 (27-216)||(34639986-34640173)
chr6 (27-216)||(34646660-34646847)
chr6 (27-141)||(25469704-25469816)
chr6 (17-83)||(24512833-24512899)
chr6 (28-224)||(9187352-9187550)
chr6 (28-84)||(25397172-25397228)
chr6 (28-84)||(19471335-19471391)
chr6 (28-84)||(25348486-25348542)
chr6 (27-111)||(31252394-31252478)
chr6 (30-84)||(25598643-25598697)
[»] scaffold1773 (1 HSPs)
scaffold1773 (20-279)||(983-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (20-279)||(49984-50241)
[»] chr4 (12 HSPs)
chr4 (17-279)||(8045822-8046083)
chr4 (17-282)||(11847908-11848179)
chr4 (27-216)||(53483573-53483760)
chr4 (17-83)||(15408139-15408205)
chr4 (27-217)||(27906130-27906321)
chr4 (28-84)||(8834895-8834951)
chr4 (28-84)||(13888641-13888697)
chr4 (30-111)||(14486632-14486713)
chr4 (28-84)||(15245215-15245271)
chr4 (33-84)||(22724691-22724742)
chr4 (22-63)||(15747551-15747592)
chr4 (28-84)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (17-236)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (17-279)||(740-1002)
[»] chr2 (17 HSPs)
chr2 (28-279)||(19661454-19661703)
chr2 (28-279)||(6483523-6483772)
chr2 (28-279)||(6486990-6487239)
chr2 (17-224)||(26583687-26583892)
chr2 (30-279)||(23089057-23089305)
chr2 (30-279)||(23878813-23879060)
chr2 (28-279)||(23101463-23101713)
chr2 (27-281)||(5706023-5706274)
chr2 (28-92)||(23265133-23265197)
chr2 (28-92)||(23280201-23280265)
chr2 (28-89)||(21908353-21908414)
chr2 (28-84)||(24661576-24661632)
chr2 (27-82)||(10577-10632)
chr2 (17-208)||(23168288-23168483)
chr2 (17-208)||(23579545-23579740)
chr2 (27-82)||(25180929-25180984)
chr2 (18-99)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (30-267)||(14398-14635)
[»] chr8 (15 HSPs)
chr8 (30-279)||(8727735-8727984)
chr8 (17-279)||(23866418-23866680)
chr8 (27-279)||(44477428-44477678)
chr8 (27-279)||(44492586-44492836)
chr8 (17-236)||(17054440-17054656)
chr8 (119-279)||(27940946-27941104)
chr8 (28-137)||(18614217-18614327)
chr8 (28-92)||(23482053-23482117)
chr8 (17-83)||(14056553-14056619)
chr8 (28-84)||(39364919-39364975)
chr8 (17-83)||(25111976-25112042)
chr8 (28-82)||(29643386-29643440)
chr8 (27-82)||(24320670-24320725)
chr8 (16-83)||(27940840-27940907)
chr8 (28-84)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (28-279)||(20437024-20437274)
chr1 (17-236)||(41111884-41112100)
chr1 (28-92)||(32651563-32651627)
chr1 (28-83)||(19663517-19663572)
chr1 (28-92)||(18712790-18712854)
chr1 (28-84)||(20805320-20805376)
chr1 (28-83)||(11158093-11158148)
chr1 (30-84)||(10811785-10811839)
chr1 (27-82)||(20851132-20851187)
chr1 (27-82)||(20857759-20857814)
chr1 (27-82)||(21706276-21706331)
chr1 (27-82)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (27-279)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (27-279)||(1525-1776)
[»] scaffold0117 (2 HSPs)
scaffold0117 (17-279)||(1887-2148)
scaffold0117 (17-279)||(8564-8825)
[»] scaffold0247 (1 HSPs)
scaffold0247 (17-279)||(11146-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (17-267)||(109-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (16-279)||(17973-18236)
[»] scaffold0154 (1 HSPs)
scaffold0154 (17-224)||(30715-30923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (30-279)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (30-279)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (22-218)||(1727-1920)
scaffold0796 (22-218)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (23-110)||(904-991)
scaffold0456 (23-110)||(8049-8136)
scaffold0456 (171-267)||(806-901)
scaffold0456 (171-267)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (187-279)||(3466-3558)
[»] scaffold0129 (1 HSPs)
scaffold0129 (21-139)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-83)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (28-92)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (28-92)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (17-83)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (28-83)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-83)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (28-92)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (17-81)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (28-92)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-92)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (17-79)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (17-217)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (17-116)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (27-111)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (28-147)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (28-84)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (14-49)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (28-83)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-99)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (24-84)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (30-217)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (27-82)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (27-82)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (27-82)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (28-82)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (27-111)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (28-84)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-42)||(80293-80321)
scaffold0003 (14-42)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 23 - 279
Target Start/End: Complemental strand, 18873420 - 18873164
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  123 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 222  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  223 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 18873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 15168230 - 15167979
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 15167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 32 - 279
Target Start/End: Original strand, 10895795 - 10896042
Alignment:
Q  32 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 130  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  131 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 230  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  231 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 10896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 24 - 279
Target Start/End: Complemental strand, 14423043 - 14422789
Alignment:
Q  24 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  123 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 222  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  223 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 14422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 12709833 - 12710095
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  216 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 13122904 - 13123166
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  216 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 13123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 16009631 - 16009382
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 16009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 13743774 - 13743526
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  217 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 267  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 224  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 224  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21230949 - 21231015
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230949 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 20311039 - 20311107
Alignment:
Q  17 ttctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311039 ttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 126  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  127 tgatgatgattctgaagggaa 147  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 23 - 279
Target Start/End: Complemental strand, 22751201 - 22750945
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  123 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 222  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  223 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 22750945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 16 - 279
Target Start/End: Original strand, 38144525 - 38144786
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38144525 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattga 38144624  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||    
T  38144625 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 38144723  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  38144724 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 38144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 28370055 - 28370304
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 28370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 19512441 - 19512191
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 122  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  123 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 222  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  223 -cataaattgattga 236  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 22438736 - 22438803
Alignment:
Q  17 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438736 ttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 114  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  115 agggttagggtttgatgatgattctgaa 142  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42961633 - 42961566
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961633 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 80  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 80  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 14762758 - 14763009
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 14763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 30 - 277
Target Start/End: Original strand, 38310802 - 38311049
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  130 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  230 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatga 277  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatga 38311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 260
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  130 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  230 tgattgagaattatgagcgattggatgaatt 260  Q
    ||||||| ||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 30 - 267
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  129 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 227  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaat 267  Q
    | ||||||| || |||||  |||||||| |||||||||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 9534382 - 9534133
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 9534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 27 - 279
Target Start/End: Original strand, 23370505 - 23370756
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 225  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  226 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 55499104 - 55499353
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 126  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatg 55499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 279
Target Start/End: Original strand, 24933828 - 24934077
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 225  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  226 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
     |||||||||| | || |||   |||| |||||||||||||| | |||||||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatg 24934077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 16801457 - 16801635
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |||||| |||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattga 16801555  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 196  Q
     |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801556 aggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 89  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  127 tgatgatgattctga 141  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  127 tgatgatgattctga 141  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  127 tgatgatgattctga 141  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 219; Significance: 1e-120; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 11840 - 12102
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgag 11939  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  11940 agttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgc 12039  T
Q  217 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  12040 tgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 27 - 279
Target Start/End: Complemental strand, 111741 - 111491
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  228 attgattgagaattatgagcgattggatgaattg 261  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 29614136 - 29614398
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatg 29614398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 23839253 - 23839003
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 10986170 - 10986431
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 115  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 10986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  227 aattgattgagaattatgagcgattggatgaattgat 263  Q
    |||||||||| ||||||||  |||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 18800503 - 18800242
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 115  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  18800503 ttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 18800404  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| |||||||||| ||||||    
T  18800403 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttg 18800305  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
     |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  ||||||||    
T  18800304 ttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatg 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 162  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 21565214 - 21565462
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 21565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  127 tgatgatgattctga 141  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 24512833 - 24512899
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512833 ttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 224
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 124  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  125 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 224  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 279
Target Start/End: Complemental strand, 1240 - 983
Alignment:
Q  20 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  120 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 219  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  220 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 20 - 279
Target Start/End: Complemental strand, 50241 - 49984
Alignment:
Q  20 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  120 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 219  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  220 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 49984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 8045822 - 8046083
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  217 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 8046083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 17 - 282
Target Start/End: Complemental strand, 11848179 - 11847908
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  112 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 210  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  211 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgatg 282  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatg 11847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 15408205 - 15408139
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408205 ttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 125  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 217  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  33 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataa 63  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  216 ctgtgatcataaattgattga 236  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 740 - 1002
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
     |||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 19661454 - 19661703
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 6483772 - 6483523
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6483523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 28 - 279
Target Start/End: Complemental strand, 6487239 - 6486990
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 127  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 26583892 - 26583687
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  217 tgtgatca 224  Q
    ||||||||    
T  26583694 tgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 23089057 - 23089305
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 23089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 279
Target Start/End: Complemental strand, 23879060 - 23878813
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 128  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  129 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 228  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  229 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatg 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 23101463 - 23101713
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 125  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 225  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  226 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || |||||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatg 23101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 281
Target Start/End: Original strand, 5706023 - 5706274
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 125  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 224  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||||||| ||||||||| ||| ||| |||||||||||   || ||    
T  5706122 ttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tctctgaatttaatgttaagaatgaaagcttgatccatgttgttgctacaatcca 5706218  T
Q  225 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgat 281  Q
    | |||||||||| |||| |||   |||| |||||||||||||| |||| ||||||||    
T  5706219 ttaattgattga-aattttgatgaattgtatgaattgatgaatatgtggatgatgat 5706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 89  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 111  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  112 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 208  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 111  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  112 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 208  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  18 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 99  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 267
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  129 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 228  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  229 ttgattgagaattatgagcgattggatgaattgatgaat 267  Q
     ||||||| || |||||  |||||||| |||||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 8727735 - 8727984
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 128  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  129 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 228  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  229 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 8727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 23866680 - 23866418
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  216 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 23866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 27 - 279
Target Start/End: Complemental strand, 44477678 - 44477428
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 27 - 279
Target Start/End: Complemental strand, 44492836 - 44492586
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44492586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 279
Target Start/End: Original strand, 27940946 - 27941104
Alignment:
Q  119 ttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 218  Q
    ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||| |     
T  27940946 ttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  219 tgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  27941045 tgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 27941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  127 tgatgatgatt 137  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 14056553 - 14056619
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056553 ttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 25112042 - 25111976
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112042 ttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 27940840 - 27940907
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  27940840 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 28 - 279
Target Start/End: Original strand, 20437024 - 20437274
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 126  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  127 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  217 tgtgat-cataaattgattga 236  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 27 - 279
Target Start/End: Original strand, 10195 - 10446
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 225  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  226 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 10446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 27 - 279
Target Start/End: Original strand, 1525 - 1776
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  126 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 225  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  226 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 161; Significance: 7e-86; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 1887 - 2148
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatg 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 8564 - 8825
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 115  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 279
Target Start/End: Complemental strand, 11407 - 11146
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11407 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 11308  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||| ||  |||||    
T  11307 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttg 11209  T
Q  216 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  11208 ctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 17 - 267
Target Start/End: Complemental strand, 356 - 109
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 116  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  117 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 216  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  217 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 267  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 279
Target Start/End: Complemental strand, 18236 - 17973
Alignment:
Q  16 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattg 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||    
T  18236 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattg 18137  T
Q  115 agggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttcagaatgaaaacttaatctatgttgt 213  Q
    ||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |||||||||||||||| |||||||||    
T  18136 agggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgt 18038  T
Q  214 tgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | |||||||||    
T  18037 tgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatg 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 30923 - 30715
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30923 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattga 30824  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    || ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| |||||||||  | ||||||||  |||||    
T  30823 ggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctataatgttg 30724  T
Q  216 ctgtgatca 224  Q
     ||||||||    
T  30723 atgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 3295 - 3544
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  128 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 226  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  227 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 3624 - 3872
Alignment:
Q  30 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 127  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  128 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 227  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  228 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  122 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 218  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  22 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  122 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 218  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  23 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  171 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 267  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  171 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 267  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

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Target: scaffold0634 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
Q  187 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  21 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 119  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  120 tagggtttgatgatgattct 139  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40521 - 40587
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40521 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

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Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 17710 - 17643
Alignment:
Q  17 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17710 ttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 135539 - 135473
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135539 ttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 8 - 72
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 22582 - 22646
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 81  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22582 ttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 92  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 79  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 115  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  116 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 215  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  216 ct 217  Q
    ||    
T  23759 ct 23760  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  17 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 115  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  116 g 116  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 126  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  127 tgatgatgattctgaagggaa 147  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 5522 - 5487
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgagactatct 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  5522 ttattctgcaaaactaaggtaagggtgagactatct 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 83  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  18 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 99  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  24 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  30 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 128  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  129 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 217  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 82  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  27 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 111  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  28 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 84  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 80293 - 80321
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgag 42  Q
    |||||||||||||||||||||||||||||    
T  80293 ttattctgcaaaactaaggtaagggtgag 80321  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 100015 - 100043
Alignment:
Q  14 ttattctgcaaaactaaggtaagggtgag 42  Q
    |||||||||||||||||||||||||||||    
T  100015 ttattctgcaaaactaaggtaagggtgag 100043  T

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