View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1645_low_5 (Length: 381)

Name: NF1645_low_5
Description: NF1645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1645_low_5
NF1645_low_5
[»] chr8 (37 HSPs)
chr8 (6-362)||(43970049-43970419)
chr8 (288-364)||(40228656-40228732)
chr8 (288-364)||(39698661-39698737)
chr8 (284-362)||(6374490-6374568)
chr8 (284-362)||(34796679-34796756)
chr8 (300-366)||(43448810-43448876)
chr8 (303-364)||(29025744-29025805)
chr8 (280-353)||(39463332-39463405)
chr8 (280-355)||(14234220-14234295)
chr8 (280-362)||(15750327-15750410)
chr8 (280-362)||(514950-515032)
chr8 (280-362)||(34156608-34156690)
chr8 (295-364)||(36669789-36669858)
chr8 (300-364)||(4760554-4760617)
chr8 (300-364)||(31899243-31899307)
chr8 (308-362)||(9812274-9812328)
chr8 (300-362)||(40399875-40399937)
chr8 (280-354)||(42179168-42179242)
chr8 (305-363)||(43084623-43084681)
chr8 (300-364)||(17921050-17921115)
chr8 (300-364)||(4989572-4989636)
chr8 (304-364)||(9304629-9304688)
chr8 (300-364)||(9880496-9880560)
chr8 (284-362)||(5295403-5295482)
chr8 (302-353)||(29312197-29312248)
chr8 (299-362)||(41679404-41679467)
chr8 (284-362)||(13367946-13368024)
chr8 (284-362)||(45358892-45358970)
chr8 (304-364)||(7839556-7839616)
chr8 (302-362)||(13496333-13496393)
chr8 (309-364)||(5790641-5790696)
chr8 (296-354)||(31233945-31234003)
chr8 (304-360)||(44713632-44713688)
chr8 (304-362)||(15227667-15227725)
chr8 (300-362)||(43561416-43561478)
chr8 (309-362)||(2375844-2375897)
chr8 (300-364)||(31693614-31693681)
[»] scaffold0294 (1 HSPs)
scaffold0294 (296-364)||(3499-3567)
[»] chr3 (46 HSPs)
chr3 (288-364)||(13756865-13756941)
chr3 (300-364)||(31853554-31853618)
chr3 (296-364)||(39359010-39359078)
chr3 (280-362)||(30315382-30315465)
chr3 (280-362)||(9189430-9189512)
chr3 (280-362)||(30934804-30934886)
chr3 (288-364)||(23525308-23525384)
chr3 (300-364)||(44676315-44676379)
chr3 (300-364)||(11393639-11393703)
chr3 (288-364)||(33194023-33194099)
chr3 (288-364)||(41287488-41287564)
chr3 (288-364)||(47895336-47895412)
chr3 (300-363)||(38016468-38016531)
chr3 (285-362)||(19373664-19373741)
chr3 (280-364)||(45566872-45566957)
chr3 (300-364)||(45213714-45213778)
chr3 (279-362)||(8817213-8817296)
chr3 (284-362)||(36844737-36844815)
chr3 (280-362)||(38141023-38141105)
chr3 (280-362)||(40487901-40487983)
chr3 (284-354)||(42072062-42072132)
chr3 (280-362)||(48903359-48903441)
chr3 (300-364)||(30431214-30431278)
chr3 (304-364)||(32492174-32492233)
chr3 (300-364)||(38363885-38363949)
chr3 (300-360)||(50088312-50088372)
chr3 (304-364)||(51398108-51398168)
chr3 (300-363)||(36460900-36460962)
chr3 (309-364)||(41850485-41850539)
chr3 (287-362)||(50346705-50346780)
chr3 (300-350)||(35557764-35557814)
chr3 (303-364)||(33024292-33024353)
chr3 (302-363)||(39168802-39168863)
chr3 (300-364)||(45518476-45518540)
chr3 (300-364)||(53200673-53200737)
chr3 (309-364)||(2458111-2458166)
chr3 (309-364)||(30426315-30426370)
chr3 (309-364)||(47138068-47138123)
chr3 (310-360)||(27067710-27067759)
chr3 (322-364)||(36729764-36729806)
chr3 (281-354)||(7230897-7230969)
chr3 (309-362)||(40717665-40717717)
chr3 (280-345)||(48901793-48901858)
chr3 (288-340)||(36729826-36729878)
chr3 (311-364)||(3152799-3152851)
chr3 (284-325)||(22857167-22857208)
[»] chr7 (46 HSPs)
chr7 (280-362)||(29636222-29636304)
chr7 (280-362)||(21819356-21819438)
chr7 (281-362)||(47461370-47461450)
chr7 (300-364)||(1742085-1742149)
chr7 (300-364)||(22298090-22298154)
chr7 (288-364)||(23155455-23155530)
chr7 (280-362)||(10476209-10476291)
chr7 (300-364)||(13405120-13405184)
chr7 (300-364)||(35777913-35777977)
chr7 (300-364)||(37815818-37815882)
chr7 (286-362)||(40339538-40339614)
chr7 (288-364)||(45933582-45933657)
chr7 (305-364)||(23935520-23935579)
chr7 (280-362)||(28289287-28289370)
chr7 (284-362)||(21752107-21752185)
chr7 (290-364)||(24680212-24680286)
chr7 (307-364)||(10599464-10599521)
chr7 (300-364)||(29530928-29530992)
chr7 (288-364)||(45948623-45948699)
chr7 (300-364)||(48684817-48684881)
chr7 (280-355)||(48843625-48843701)
chr7 (300-362)||(6563414-6563477)
chr7 (300-355)||(7759353-7759408)
chr7 (280-362)||(19104997-19105079)
chr7 (280-362)||(40753425-40753506)
chr7 (296-364)||(44453225-44453291)
chr7 (300-364)||(31418506-31418570)
chr7 (300-364)||(42879927-42879991)
chr7 (280-355)||(1031228-1031303)
chr7 (309-362)||(34012559-34012612)
chr7 (309-362)||(45499820-45499873)
chr7 (300-364)||(27935861-27935925)
chr7 (308-364)||(27947494-27947550)
chr7 (300-362)||(7335373-7335436)
chr7 (284-362)||(33939729-33939808)
chr7 (284-362)||(8293064-8293142)
chr7 (306-364)||(36808034-36808092)
chr7 (284-347)||(42753784-42753845)
chr7 (300-362)||(31196663-31196723)
chr7 (300-362)||(37490880-37490943)
chr7 (309-364)||(41137832-41137886)
chr7 (304-362)||(47187749-47187807)
chr7 (327-364)||(7795236-7795273)
chr7 (304-362)||(24133124-24133184)
chr7 (282-354)||(24780322-24780395)
chr7 (302-354)||(19303398-19303450)
[»] chr5 (43 HSPs)
chr5 (280-362)||(36164960-36165042)
chr5 (300-364)||(2729781-2729845)
chr5 (300-364)||(42661935-42661999)
chr5 (300-363)||(34446023-34446086)
chr5 (302-364)||(42978068-42978130)
chr5 (284-361)||(11977665-11977742)
chr5 (309-364)||(8336402-8336457)
chr5 (295-366)||(34972643-34972714)
chr5 (280-362)||(14161898-14161980)
chr5 (304-362)||(34534456-34534514)
chr5 (300-364)||(6519070-6519135)
chr5 (286-362)||(843097-843173)
chr5 (300-364)||(3306004-3306068)
chr5 (300-364)||(14620489-14620553)
chr5 (300-364)||(39566277-39566341)
chr5 (304-364)||(39730044-39730104)
chr5 (300-362)||(4911112-4911175)
chr5 (303-362)||(14005989-14006048)
chr5 (284-362)||(7721172-7721250)
chr5 (309-363)||(29807310-29807364)
chr5 (309-363)||(39335199-39335253)
chr5 (281-362)||(15167009-15167090)
chr5 (303-364)||(42104058-42104119)
chr5 (286-362)||(27797858-27797933)
chr5 (280-355)||(7748902-7748977)
chr5 (299-354)||(38362143-38362198)
chr5 (300-362)||(7736467-7736529)
chr5 (280-364)||(4425047-4425132)
chr5 (311-364)||(21319307-21319360)
chr5 (280-345)||(28591641-28591706)
chr5 (310-362)||(7579591-7579643)
chr5 (296-364)||(26660845-26660912)
chr5 (296-364)||(26932438-26932505)
chr5 (309-364)||(21375645-21375700)
chr5 (304-362)||(1309356-1309414)
chr5 (300-362)||(38369965-38370027)
chr5 (300-362)||(41645330-41645391)
chr5 (309-362)||(13974376-13974429)
chr5 (311-363)||(27600499-27600551)
chr5 (309-364)||(13761823-13761878)
chr5 (309-364)||(39504828-39504883)
chr5 (284-362)||(21634189-21634266)
chr5 (284-362)||(21642436-21642513)
[»] chr2 (47 HSPs)
chr2 (280-362)||(18719430-18719512)
chr2 (300-364)||(19636602-19636666)
chr2 (300-364)||(19835195-19835259)
chr2 (300-364)||(29396675-29396739)
chr2 (291-362)||(43971573-43971644)
chr2 (284-362)||(10195752-10195830)
chr2 (300-362)||(37038767-37038829)
chr2 (300-364)||(441226-441290)
chr2 (300-364)||(4288706-4288770)
chr2 (300-364)||(32228006-32228070)
chr2 (300-364)||(38926700-38926764)
chr2 (284-355)||(33482234-33482305)
chr2 (286-364)||(12393914-12393992)
chr2 (280-362)||(33055964-33056046)
chr2 (300-364)||(29808906-29808971)
chr2 (300-364)||(4133116-4133180)
chr2 (304-364)||(6220399-6220459)
chr2 (304-364)||(12342191-12342251)
chr2 (304-363)||(1423289-1423348)
chr2 (296-362)||(8540127-8540194)
chr2 (284-362)||(27726417-27726493)
chr2 (309-364)||(30855208-30855263)
chr2 (300-363)||(45081896-45081959)
chr2 (309-363)||(34546144-34546198)
chr2 (300-354)||(43480875-43480929)
chr2 (280-362)||(4658229-4658313)
chr2 (303-364)||(36106398-36106459)
chr2 (300-364)||(8774147-8774210)
chr2 (300-364)||(8789425-8789488)
chr2 (300-364)||(16807512-16807576)
chr2 (300-364)||(16846793-16846857)
chr2 (302-362)||(27964222-27964282)
chr2 (300-364)||(42743123-42743186)
chr2 (280-355)||(11132624-11132699)
chr2 (300-363)||(13562088-13562151)
chr2 (299-362)||(40608603-40608666)
chr2 (304-362)||(11188247-11188305)
chr2 (280-342)||(18579240-18579302)
chr2 (300-364)||(25383480-25383544)
chr2 (300-364)||(42004985-42005048)
chr2 (300-362)||(7872774-7872836)
chr2 (284-359)||(19469601-19469678)
chr2 (304-362)||(36685739-36685796)
chr2 (299-364)||(18717169-18717234)
chr2 (300-345)||(19164450-19164495)
chr2 (308-361)||(34455793-34455846)
chr2 (280-325)||(7028847-7028892)
[»] chr4 (49 HSPs)
chr4 (296-366)||(50623173-50623244)
chr4 (300-364)||(19878742-19878806)
chr4 (300-364)||(52957789-52957853)
chr4 (300-363)||(28734692-28734755)
chr4 (280-362)||(30261332-30261414)
chr4 (300-366)||(40345344-40345410)
chr4 (300-364)||(37654503-37654568)
chr4 (300-364)||(2728397-2728461)
chr4 (300-364)||(20448133-20448197)
chr4 (300-364)||(41920308-41920372)
chr4 (300-364)||(42605666-42605730)
chr4 (304-364)||(45043587-45043647)
chr4 (300-364)||(49089557-49089621)
chr4 (300-364)||(52848053-52848117)
chr4 (300-364)||(54042182-54042246)
chr4 (284-355)||(6991271-6991342)
chr4 (300-363)||(46392063-46392126)
chr4 (284-355)||(50203151-50203222)
chr4 (280-362)||(10573156-10573238)
chr4 (280-362)||(52162177-52162259)
chr4 (300-364)||(1819656-1819720)
chr4 (304-364)||(19930812-19930872)
chr4 (300-364)||(29370698-29370761)
chr4 (303-363)||(52253945-52254005)
chr4 (300-364)||(53814496-53814560)
chr4 (279-362)||(19451206-19451289)
chr4 (309-364)||(24940983-24941038)
chr4 (300-363)||(44571865-44571928)
chr4 (284-362)||(45839714-45839793)
chr4 (280-362)||(47817811-47817894)
chr4 (280-362)||(47458388-47458469)
chr4 (301-363)||(49080477-49080539)
chr4 (288-364)||(2493184-2493260)
chr4 (304-364)||(27653772-27653832)
chr4 (296-364)||(29519524-29519592)
chr4 (300-364)||(39984911-39984975)
chr4 (300-364)||(56373574-56373638)
chr4 (284-362)||(8971119-8971198)
chr4 (301-364)||(18430084-18430147)
chr4 (300-362)||(34316316-34316378)
chr4 (284-362)||(44868253-44868331)
chr4 (300-364)||(38991762-38991824)
chr4 (300-354)||(30780029-30780084)
chr4 (304-355)||(41496302-41496353)
chr4 (284-354)||(34413556-34413627)
chr4 (309-364)||(40010871-40010926)
chr4 (300-362)||(11364319-11364381)
chr4 (280-362)||(620177-620261)
chr4 (309-354)||(44061096-44061141)
[»] chr6 (32 HSPs)
chr6 (280-362)||(12459316-12459398)
chr6 (300-364)||(234128-234192)
chr6 (280-360)||(16128006-16128086)
chr6 (300-364)||(31443440-31443504)
chr6 (280-362)||(3988741-3988823)
chr6 (304-355)||(8957865-8957916)
chr6 (304-355)||(8961441-8961492)
chr6 (304-362)||(9940745-9940803)
chr6 (280-364)||(10540471-10540556)
chr6 (300-353)||(29713412-29713465)
chr6 (280-363)||(17552243-17552327)
chr6 (300-364)||(24163709-24163773)
chr6 (280-366)||(1134998-1135085)
chr6 (280-362)||(1502750-1502832)
chr6 (300-364)||(23259320-23259384)
chr6 (299-359)||(32619825-32619885)
chr6 (284-354)||(577138-577209)
chr6 (280-362)||(17828356-17828438)
chr6 (309-364)||(19675081-19675136)
chr6 (281-362)||(20226218-20226299)
chr6 (281-362)||(22120202-22120283)
chr6 (284-355)||(17267611-17267683)
chr6 (304-360)||(18737087-18737143)
chr6 (307-362)||(13011345-13011400)
chr6 (299-364)||(10520385-10520450)
chr6 (288-364)||(24555922-24555999)
chr6 (280-340)||(32193775-32193835)
chr6 (280-362)||(12322881-12322966)
chr6 (327-362)||(32193930-32193965)
chr6 (300-353)||(3847745-3847798)
chr6 (309-362)||(13503841-13503893)
chr6 (310-362)||(21271400-21271452)
[»] chr1 (40 HSPs)
chr1 (280-362)||(29567969-29568051)
chr1 (300-363)||(34110621-34110684)
chr1 (280-362)||(26595065-26595147)
chr1 (284-362)||(27209066-27209144)
chr1 (280-362)||(31699285-31699367)
chr1 (280-361)||(46286814-46286896)
chr1 (280-364)||(49468704-49468789)
chr1 (300-364)||(15823128-15823192)
chr1 (300-364)||(32806931-32806995)
chr1 (300-363)||(48009104-48009167)
chr1 (280-362)||(25560868-25560950)
chr1 (302-364)||(38530832-38530894)
chr1 (304-364)||(5463673-5463733)
chr1 (300-364)||(10842874-10842938)
chr1 (300-355)||(9915537-9915592)
chr1 (284-362)||(8895011-8895089)
chr1 (302-364)||(52125129-52125191)
chr1 (300-364)||(31798683-31798748)
chr1 (300-363)||(25151903-25151967)
chr1 (300-364)||(31491763-31491827)
chr1 (300-364)||(48025247-48025311)
chr1 (309-364)||(1740633-1740688)
chr1 (280-362)||(28538277-28538360)
chr1 (309-364)||(44108704-44108759)
chr1 (304-362)||(8989635-8989693)
chr1 (306-364)||(43759432-43759490)
chr1 (309-363)||(50094333-50094387)
chr1 (300-364)||(24611512-24611577)
chr1 (300-364)||(46046067-46046131)
chr1 (310-366)||(49426410-49426466)
chr1 (280-362)||(7191202-7191285)
chr1 (309-364)||(15573716-15573771)
chr1 (300-362)||(5072-5134)
chr1 (300-362)||(5225821-5225883)
chr1 (284-362)||(18794538-18794616)
chr1 (280-325)||(46554871-46554916)
chr1 (300-362)||(46271018-46271081)
chr1 (300-354)||(49900760-49900815)
chr1 (300-364)||(35847929-35847990)
chr1 (309-363)||(52066284-52066338)
[»] scaffold0182 (1 HSPs)
scaffold0182 (284-362)||(18252-18330)
[»] scaffold0110 (1 HSPs)
scaffold0110 (300-364)||(24735-24799)
[»] scaffold0026 (1 HSPs)
scaffold0026 (284-362)||(4218-4296)
[»] scaffold0565 (2 HSPs)
scaffold0565 (281-362)||(9952-10033)
scaffold0565 (304-364)||(9637-9697)
[»] scaffold0015 (1 HSPs)
scaffold0015 (305-364)||(21076-21135)
[»] scaffold0300 (1 HSPs)
scaffold0300 (284-362)||(4642-4720)
[»] scaffold0136 (1 HSPs)
scaffold0136 (309-354)||(9647-9692)
[»] scaffold0048 (1 HSPs)
scaffold0048 (303-364)||(62730-62791)
[»] scaffold0502 (1 HSPs)
scaffold0502 (284-362)||(569-647)
[»] scaffold0983 (1 HSPs)
scaffold0983 (284-362)||(684-762)


Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 362
Target Start/End: Complemental strand, 43970419 - 43970049
Alignment:
Q  6 gtgagatgaaaccattgggagaatgggaaaataaatacgatgaatcaaagtgacaactctataattaggaatcattgtaattagtgtgtgagattaagtg 105  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43970419 gtgagaagaaactattggaagaatggaaaaataaatacgatgaatcaaagtgacaactctataattaggaatcattgtaattagtgtgtgagattaagtg 43970320  T
Q  106 agagattggaagcaaacaatgtgagaattccttaaagaaatagggaatcagagatt------gt----------accgtcaacgtagctttgtagtgtgt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      ||          ||||||||||||||||||||||| ||    
T  43970319 agagattggaagcaaacaatgtgagaattccttaaagaaatagggaatcagaggtttgtaccgtcaacaatgcaaccgtcaacgtagctttgtagtgcgt 43970220  T
Q  190 cgttcattggccaccacagtctccttctttacttacgtctctctattgccacttcagtgtagtgtagttgtcgtagactcaaagtcgtttatactatata 289  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43970219 cgttcattggccacca--gtctccttctttatttacgtctctctattgccacttcagtgtagtgtagttgtcgtagacccaaagtcgtttatactatata 43970122  T
Q  290 cattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43970121 cattacttctaaagtattattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaat 43970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 40228656 - 40228732
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  40228656 tacattacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 40228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 39698737 - 39698661
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  39698737 tacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 39698661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 6374490 - 6374568
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||    
T  6374490 tatatacattacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 6374568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 34796756 - 34796679
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34796756 tatatacactacttccaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 34796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 43448810 - 43448876
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||    
T  43448810 aaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattgat 43448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 29025805 - 29025744
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  29025805 gtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattg 29025744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 39463332 - 39463405
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatt 353  Q
    |||||||||||| || ||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  39463332 atactatatacactacttccaaagtattattttttctttaatgaaaaacaaaccaacagttgattaggataatt 39463405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 14234295 - 14234220
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||| || ||| ||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  14234295 atactatatacactacttccaaaatattattttttctttaacgaaaaacaaaccaatagttgattaggataatttg 14234220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 15750410 - 15750327
Alignment:
Q  280 atactatatacattatttctaaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| ||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  15750410 atactatatacactacttccaaagtattatttttttctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 15750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 514950 - 515032
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || |||  ||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||| ||||||    
T  514950 atactatatacactacttccgaagtattatattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaat 515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 34156608 - 34156690
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||| |||| || ||| ||| |||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||    
T  34156608 atactatgtacactacttccaaaatattattttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaat 34156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 36669858 - 36669789
Alignment:
Q  295 tttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| ||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  36669858 tttcaaaaatattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattg 36669789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 4760617 - 4760554
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  4760617 aaagtattattttt-ctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 4760554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31899307 - 31899243
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||    
T  31899307 aaagtattatcttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 31899243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 9812274 - 9812328
Alignment:
Q  308 attttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  9812274 attttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9812328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 40399937 - 40399875
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||    
T  40399937 aaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 40399875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 42179168 - 42179242
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||||||| |||||  |||||||||||||||||||||| ||| |||||| ||||||| |||| ||||||||    
T  42179168 atactatatacactattttaaaagtattattttttctttaatgaaaaacaaactaatagttaattatgataattt 42179242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 43084681 - 43084623
Alignment:
Q  305 attattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||    
T  43084681 attattttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaatt 43084623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 17921050 - 17921115
Alignment:
Q  300 aaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||    
T  17921050 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattg 17921115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 4989572 - 4989636
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||  |||||||    
T  4989572 aaagtattattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaattg 4989636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 9304688 - 9304629
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||    
T  9304688 tattattttttctttaagaaaa-acaaatcaatagttgattaggataatttggtaaaattg 9304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 9880560 - 9880496
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||  ||||||||    
T  9880560 aaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaattg 9880496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 5295482 - 5295403
Alignment:
Q  284 tatatacattatttctaaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| ||||||||||| | ||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  5295482 tatatacactacttccaaaatattatttttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaat 5295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 29312248 - 29312197
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatt 353  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  29312248 agtattattttttctttaatgaaaaacaaaccaatagttgattagtataatt 29312197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 41679404 - 41679467
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||||||||||||||||| |||  |||||||||||||||||| ||||||||| ||||||    
T  41679404 taaaatattattttttctttaatgaaaatcaaaccaatagttgattatgataatttggtaaaat 41679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 13368024 - 13367946
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| |||||||||||||||||||||| ||| | |||||| || |||||||||||||| || ||||||    
T  13368024 tatatacactacttccaaagtattattttttctttaatgaaaaataaaccagtaattgattaggataatatggtaaaat 13367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 45358970 - 45358892
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| |||||||||||||||||||||| ||| |||||| ||||||||||||  |||||| | ||||||    
T  45358970 tatatacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaaaataattcggtaaaat 45358892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 7839556 - 7839616
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| | ||||||||||||||||| ||||||| | ||||||||    
T  7839556 tattattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaattg 7839616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 13496333 - 13496393
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||| ||  ||| ||||||||||| ||||||||||||||||| ||||||    
T  13496333 agtattattttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaat 13496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 5790696 - 5790641
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||| |||| |||  |||||||||||||||||||||||||||| ||||||||    
T  5790696 ttttttctctaatgaaaagcaaaccaatagttgattaggataatttggtaaaattg 5790641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 31234003 - 31233945
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||| |||||||||| ||||||| ||| | ||||||||||||||||||||| ||||    
T  31234003 ttctaaattattatttttcctttaatgaaaaataaaccaatagttgattaggatgattt 31233945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 44713632 - 44713688
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaa 360  Q
    |||||||||||||||||| ||| | |||| |||||||||||| ||||||||| ||||    
T  44713632 tattattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaa 44713688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 15227667 - 15227725
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| ||||||||||||| ||| |||||| |||  |||||||| |||||||||||||||    
T  15227667 tatttttttttctttaatgaaaaacaaactaatgattgattagaataatttgataaaat 15227725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 43561416 - 43561478
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| | |||  |||  ||||||| ||||||||||||||||    
T  43561416 aaagtattattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaat 43561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 2375897 - 2375844
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||| ||||||||||  ||||||| || |||||||||||||    
T  2375897 ttttttctttaatgaaaaacaaaccaatgattgattaagacaatttgataaaat 2375844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31693681 - 31693614
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaat---agttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||||||| ||| |||||| |||   ||||||||||||||||||  ||||||||    
T  31693681 aaagtattattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaattg 31693614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 3567 - 3499
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3567 ttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattg 3499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 13756941 - 13756865
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13756941 tacattacttttaaagtattattttttctttaataaaaaacaaaccaatagttgattaggataatttgctaaaattg 13756865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31853618 - 31853554
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31853618 aaagtattattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaattg 31853554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 39359010 - 39359078
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  39359010 ttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 39359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 30315382 - 30315465
Alignment:
Q  280 atactatatacatta-tttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  30315382 atactatatacactactttcaaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 9189512 - 9189430
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  9189512 atactatatacattacttccaaaatattattttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaat 9189430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 30934886 - 30934804
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||||||||||||||||| |||||||| ||| ||||||||||| ||||||| ||||||||||||||||    
T  30934886 atactatatacactacttctaaagtattattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaat 30934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 23525384 - 23525308
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  23525384 tacattacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattg 23525308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 44676315 - 44676379
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  44676315 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 44676379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 11393639 - 11393703
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||    
T  11393639 aaagtattattttttctttaattaataacaaatcaatagttgattaggataatttgataaaattg 11393703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 33194099 - 33194023
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| |||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||    
T  33194099 tacattacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattg 33194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 41287564 - 41287488
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| |||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  41287564 tacattacttccaaagtatttttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaattg 41287488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 47895412 - 47895336
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| |||||| |||||||||||||||||||||| |||  ||||| |||||||||||||||||||||| ||||||||    
T  47895412 tacactatttccaaagtattattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaattg 47895336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 38016468 - 38016531
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||    
T  38016468 aaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaatt 38016531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 19373664 - 19373741
Alignment:
Q  285 atatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||| || ||| ||||| |||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||    
T  19373664 atatacactacttccaaagttttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaat 19373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 45566872 - 45566957
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| |||||| || |||| |||| ||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||    
T  45566872 atactatattacattacttttaaaatattgttttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattg 45566957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 45213778 - 45213714
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||| |||||||| ||||||||    
T  45213778 aaagtattattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaattg 45213714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 362
Target Start/End: Original strand, 8817213 - 8817296
Alignment:
Q  279 tatactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||| ||| || |||||| ||||||||||||||||||| ||| | ||| |||||||||||||| |||||||||||||||    
T  8817213 tatattatacacactacttctaatgtattattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaat 8817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 36844815 - 36844737
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| |||||||||| ||||||||||| ||| || || ||||||||||||||||||||||| ||||||    
T  36844815 tatatacactacttccaaagtattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaat 36844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 38141023 - 38141105
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| ||| ||| |||||||||||||| ||| ||||||||||| |||||||| |||||||| ||||||    
T  38141023 atactatatacactacttccaaaatataattttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaat 38141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 40487901 - 40487983
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||||||||||||||||||||||||   ||| |||||  ||||||||||||  |||||||||||||||    
T  40487901 atactatatacactacttctaaagtattattttttctttatcgaaaaacaaattaatagttgattataataatttgataaaat 40487983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 42072062 - 42072132
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||| |||||||||||||| |||||||||||  || ||||| ||||||||||||| ||||||||    
T  42072062 tatatacattacttctaaagtattatgttttctttaatggaaaacaaatcaatagttgattatgataattt 42072132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 48903359 - 48903441
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||  | |||||||||||||||||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  48903359 atactatatacactaatttcatagtattattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaat 48903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 30431214 - 30431278
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||| |||| ||| ||||  ||||||||||||||||||||||| ||||||||    
T  30431214 aaagtattattttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaattg 30431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 32492233 - 32492174
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||||    
T  32492233 tattattttttctttaataaaaaa-aaatcaataattgattaggataatttgataaaattg 32492174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 38363885 - 38363949
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||||||  ||| |||||||||||||| ||||||||    
T  38363885 aaagtattattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaattg 38363949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 360
Target Start/End: Complemental strand, 50088372 - 50088312
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaa 360  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  50088372 aaagtattaatttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaa 50088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 51398108 - 51398168
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| | ||| ||||||||||||||||||||||| ||||||||    
T  51398108 tattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattg 51398168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 36460900 - 36460962
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| |||||||    
T  36460900 aaagtattattttt-ctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaatt 36460962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 41850485 - 41850539
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  41850485 ttttttctttaatgaaa-acaaaccaatagttgattaggataatttggtaaaattg 41850539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 50346705 - 50346780
Alignment:
Q  287 atacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| ||| ||  |||||||||||||||||| ||| ||||| |||||||| |||| ||||||||||||||||    
T  50346705 atacattacttccaacatattattttttctttaatgaaaaacaaatcaatagttaattaagataatttgataaaat 50346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 35557814 - 35557764
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggata 350  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  35557814 aaagtattattttttctttaatgaaaaataaaccaatagttgattaggata 35557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 33024353 - 33024292
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| |||||||||  || ||||| ||||||||||||| ||||||||||||||||||    
T  33024353 gtattatttcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaattg 33024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 39168802 - 39168863
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||| |||||| ||| |||||  ||||||| ||||||||||||||||||||||    
T  39168802 agtattattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaatt 39168863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 45518540 - 45518476
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| |||||||||||| ||| | | | ||||| ||||||||||||||||||||||||||    
T  45518540 aaagtattaatttttctttaatgaaaaatatatcaataattgattaggataatttgataaaattg 45518476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 53200737 - 53200673
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||| ||||||||| ||||| |||  ||||| |||||||||||||||||||||| ||||||||    
T  53200737 aaagtactattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaattg 53200673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 2458111 - 2458166
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||   ||||||||||||||||||||||||||| ||||||||    
T  2458111 ttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaattg 2458166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 30426370 - 30426315
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| ||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  30426370 ttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaattg 30426315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 47138068 - 47138123
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| |||||| |||| ||||||||||||||||| ||||||||    
T  47138068 ttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaattg 47138123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 27067710 - 27067759
Alignment:
Q  310 tttttctttaataaaagacaaaccaatagttgattaggataatttgataaa 360  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  27067710 tttttctttaatgaaa-acaaaccaatagttgattaggataatttggtaaa 27067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 36729806 - 36729764
Alignment:
Q  322 aaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  36729806 aaaaaacaaaccaatagttgattaggataatttggtaaaattg 36729764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 7230969 - 7230897
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||| || ||| ||| |||||||||| ||||||| | | | ||||||||||||||||||||||||||    
T  7230969 tactatatacactacttcgaaattattattttt-ctttaatgagaaagaaaccaatagttgattaggataattt 7230897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 40717717 - 40717665
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  40717717 ttttttctttaatgaaa-acaaaccaatagttgattaagataatttggtaaaat 40717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 48901793 - 48901858
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgatta 345  Q
    |||||||||||| || ||  | |||||||||||||||||||| ||| ||||| |||||||||||||    
T  48901793 atactatatacactaatttcatagtattattttttctttaattaaaaacaaagcaatagttgatta 48901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 36729878 - 36729826
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagtt 340  Q
    ||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  36729878 tacattacttccaaagtattattttttatttaatgaaaaacaaaccaatagtt 36729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 3152851 - 3152799
Alignment:
Q  311 ttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||| ||||||||||| |||||||| |||||| | ||||||||    
T  3152851 ttttctttaataaaa-acaaaccaataattgattagaataattgggtaaaattg 3152799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 22857167 - 22857208
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaa 325  Q
    |||||||| || ||||||| ||||||||||||||||||||||    
T  22857167 tatatacactacttctaaaatattattttttctttaataaaa 22857208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 7e-25; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 29636304 - 29636222
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||||||    
T  29636304 atactatatacactacttctaaagtattattttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaat 29636222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 21819356 - 21819438
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||| ||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||    
T  21819356 atactatatacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 21819438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 47461450 - 47461370
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| || | |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47461450 tactatatacactactcctaaag-attattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 47461370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 1742085 - 1742149
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  1742085 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 1742149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 22298090 - 22298154
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  22298090 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 22298154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 23155530 - 23155455
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  23155530 tacattacttctaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 23155455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 10476209 - 10476291
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| |||||||||||| || |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  10476209 atactatatacactacttccaaagtattatttattttttagtaaaaaacaaatcaatagttgattaggataatttgataaaat 10476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 13405184 - 13405120
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  13405184 aaagtattgttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 13405120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 35777913 - 35777977
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||    
T  35777913 aaagtattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaattg 35777977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 37815818 - 37815882
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||    
T  37815818 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 37815882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 40339538 - 40339614
Alignment:
Q  286 tatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||| || ||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  40339538 tatacactacttccaaagtattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40339614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 45933657 - 45933582
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||||||    
T  45933657 tacactatttctaaagtattatttttt-tttaatgaaaaacaaaccaaaagttgattaagataatttgataaaattg 45933582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 23935520 - 23935579
Alignment:
Q  305 attattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  23935520 attattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaattg 23935579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 28289287 - 28289370
Alignment:
Q  280 atactatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||  ||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  28289287 atactatatacactactttcaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 28289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 21752185 - 21752107
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| |||||  ||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||| ||||||    
T  21752185 tatatacactattttcaaagtattattttatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 21752107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 24680212 - 24680286
Alignment:
Q  290 cattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||| ||| |||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||| ||||||||    
T  24680212 cattacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaattg 24680286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 10599464 - 10599521
Alignment:
Q  307 tattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 10599521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 29530992 - 29530928
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  29530992 aaagtattattttttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaattg 29530928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 45948699 - 45948623
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| ||| |||||||||||||||||| ||| |||||||||| |||||||| ||||||||| ||||||||    
T  45948699 tacattacttccaaaatattattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaattg 45948623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 48684817 - 48684881
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| ||||||||    
T  48684817 aaagtattattttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaattg 48684881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 48843625 - 48843701
Alignment:
Q  280 atactatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||| || ||| || |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  48843625 atactatatacactacttccaacgtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttg 48843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 6563477 - 6563414
Alignment:
Q  300 aaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  6563477 aaagtattatttttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaat 6563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 7759353 - 7759408
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  7759353 aaagtattattttttctttaatagaaaacaaactaatagttgattaggataatttg 7759408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 19105079 - 19104997
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| || ||||  ||||||||||||||||| ||  ||||| ||||||||||||||||| | ||||||||||    
T  19105079 atactatatacattacttttaaaacattattttttctttaatgaagaacaaatcaatagttgattaggattacttgataaaat 19104997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 40753506 - 40753425
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||  |||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||||    
T  40753506 atactatatacactactttcaaagtattattttt-ctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 40753425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 44453225 - 44453291
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||  ||||| ||| |||||||||||| |||||||||||||||| ||||||||    
T  44453225 ttctaaagtattatttttt--ttaatgaaaaacaaaccaataggtgattaggataatttggtaaaattg 44453291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31418570 - 31418506
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||||||||| | ||||||    
T  31418570 aaagtattattttttctttaattaaaaacaaattaatagttgattaggataatttggtgaaattg 31418506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 42879991 - 42879927
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| ||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||||    
T  42879991 aaagaattattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaattg 42879927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 1031228 - 1031303
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||| || ||| ||| |||||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  1031228 atactatatacactacttccaaattattattttttctttaataaaaaaagaatcaatagttgattatgataatttg 1031303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 34012559 - 34012612
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 45499873 - 45499820
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||    
T  45499873 ttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaat 45499820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 27935861 - 27935925
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||| |||||||| |||| | ||||||| ||||||||    
T  27935861 aaagtattattttttctttaatgaaaaacaaatcaatagttaattaagctaatttggtaaaattg 27935925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 27947550 - 27947494
Alignment:
Q  308 attttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||  ||||||||    
T  27947550 attttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaattg 27947494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 7335373 - 7335436
Alignment:
Q  300 aaagtattattttttctttaa-taaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||||||||| | ||| ||||||||| ||||||||| ||||||||| ||||||    
T  7335373 aaagtattattttttctttaatttaaaaacaaaccaacagttgattatgataatttggtaaaat 7335436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 33939808 - 33939729
Alignment:
Q  284 tatatacattatttctaaagtatta-ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||||||||| ||||||||||||| ||| | ||||||| |||||||||| |||||||| ||||||    
T  33939808 tatatacactaattccaaagtattacttttttctttaatgaaaaataaaccaacagttgattagaataatttggtaaaat 33939729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 8293142 - 8293064
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| ||||||||||||| |||| ||| ||||| ||||||||||| | ||||||||| ||||||    
T  8293142 tatatacactacttccaaattattattttttctgtaatgaaaaacaaatcaatagttgatcacgataatttggtaaaat 8293064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 36808034 - 36808092
Alignment:
Q  306 ttattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||| ||| ||||  |||||||||||| || ||||||||||||||||    
T  36808034 ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaattg 36808092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 42753784 - 42753845
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattagg 347  Q
    |||||||| ||||| |||||||||||||||  |||||| ||| | |||||||||||||||||||    
T  42753784 tatatacactatttttaaagtattattttt--tttaatgaaaaataaaccaatagttgattagg 42753845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 31196663 - 31196723
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||||||||  |||| | ||| ||||||||||||  ||||||||||||||||    
T  31196663 aaagtattattttttcttta--aaaaaataaatcaatagttgattgtgataatttgataaaat 31196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 37490880 - 37490943
Alignment:
Q  300 aaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||||||||| ||| |||||| ||||||| |||| ||||||||| ||||||    
T  37490880 aaagtattatttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaat 37490943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 41137832 - 41137886
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||  ||||||| |||||||||||||||||||| ||||||||    
T  41137832 ttttttctttaatgaaat-caaaccagtagttgattaggataatttggtaaaattg 41137886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 47187749 - 47187807
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| | ||||| || || ||||||||||| ||||||    
T  47187749 tattattttttctttaataaaaaacatatcaataattaataaggataatttggtaaaat 47187807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 7795273 - 7795236
Alignment:
Q  327 acaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  7795273 acaaaccaataggtgattaggataatttggtaaaattg 7795236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 24133184 - 24133124
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaat--agttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| ||| ||||| ||||  |||||||||| |||||||| ||||||    
T  24133184 tattattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaat 24133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 24780395 - 24780322
Alignment:
Q  282 actatatacattatttctaaagtattat-tttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||||| || ||  |||||||||  |||||||||||| ||| | ||||||||||| ||||||||||||||    
T  24780395 actatatacactaatttcaaagtattacgtttttctttaattaaaaataaaccaatagtagattaggataattt 24780322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 19303450 - 19303398
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||| ||||||||||| ||| | |||||||| |||||||| ||||||||    
T  19303450 agtattatattttctttaatgaaaaataaaccaatggttgattatgataattt 19303398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 36164960 - 36165042
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  36164960 atactatatacattacttccaaaatattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 36165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 2729845 - 2729781
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  2729845 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 2729781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 42661999 - 42661935
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  42661999 aaagtattattttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaattg 42661935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 34446086 - 34446023
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  34446086 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaatt 34446023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 42978130 - 42978068
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  42978130 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 42978068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 11977665 - 11977742
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaa 361  Q
    |||||||| || ||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||    
T  11977665 tatatacactacttccaaagtattattttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaa 11977742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 8336457 - 8336402
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  8336457 ttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattg 8336402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 34972714 - 34972643
Alignment:
Q  295 tttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    |||| ||||||||||| |||||||||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  34972714 tttccaaagtattattctttctttaataaaaaacaaattaatagttgattaggataatttggtaaaattgat 34972643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 14161980 - 14161898
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| |||||||||||||||||||||| ||| | |||||| |||||| ||| ||||||||||||||||    
T  14161980 atactatatacactacttccaaagtattattttttctttaatgaaaaataaaccagtagttgtttatgataatttgataaaat 14161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 34534456 - 34534514
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  34534456 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 6519070 - 6519135
Alignment:
Q  300 aaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  6519070 aaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaattg 6519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 843097 - 843173
Alignment:
Q  286 tatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||| || ||| ||||| |||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||    
T  843097 tatacactacttcaaaagtgttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaat 843173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 3306068 - 3306004
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||    
T  3306068 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattg 3306004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 14620553 - 14620489
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||| || ||| ||||||||||| ||||||| ||||||||||||||||||    
T  14620553 aaagtattattttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaattg 14620489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 39566277 - 39566341
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||    
T  39566277 aaagtattattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 39566341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 39730044 - 39730104
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  39730044 tattattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaattg 39730104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 4911175 - 4911112
Alignment:
Q  300 aaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  4911175 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 14005989 - 14006048
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  14005989 gtattattttttctttaatgaaaaacaaaccaatatttgattaggataatttggtaaaat 14006048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 7721172 - 7721250
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| ||  |||||||||||||||||||||  | | ||||||||||| ||||||||||||||||| ||||||    
T  7721172 tatatacattactttcaaagtattattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaat 7721250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 29807364 - 29807310
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  29807364 ttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaatt 29807310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 39335253 - 39335199
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  39335253 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaatt 39335199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 15167090 - 15167009
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| || ||| ||| |||||||||||||||||| ||| |  ||||||||||||| |||||||||||| ||||||    
T  15167090 tactatatacactacttccaaaatattattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaat 15167009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 42104119 - 42104058
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||    
T  42104119 gtattattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaattg 42104058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 27797858 - 27797933
Alignment:
Q  286 tatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||| ||| ||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  27797858 tatatattacttccaaagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 27797933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 7748977 - 7748902
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    ||||||||||||| | ||  |||||||||||||||||||||| ||| ||||||||||| || ||||| ||||||||    
T  7748977 atactatatacataactttcaaagtattattttttctttaatgaaaaacaaaccaataattaattagaataatttg 7748902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 38362198 - 38362143
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||    
T  38362198 taaagtattattttttctttaataaaaaataaaacaatagttaattaggataattt 38362143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 7736467 - 7736529
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| || ||| ||||||||||||||||||| || ||||||    
T  7736467 aaagtattattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaat 7736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 4425047 - 4425132
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| ||| || ||| |||||||||||||||||||||| ||| ||||| | |||| |||||| ||||||||| ||||||||    
T  4425047 atactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaattg 4425132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 21319360 - 21319307
Alignment:
Q  311 ttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  21319360 ttttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 21319307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 28591706 - 28591641
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgatta 345  Q
    |||||||||||| ||||| ||||  ||||||||||||||||| ||| ||||| |||||||||||||    
T  28591706 atactatatacactatttttaaaaaattattttttctttaatgaaaaacaaatcaatagttgatta 28591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 7579643 - 7579591
Alignment:
Q  310 tttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||| |||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatttgaaaaaat 7579591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 26660845 - 26660912
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||||||||||| || |||||| ||||||||    
T  26660845 ttctagagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattg 26660912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 26932438 - 26932505
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||||||||||| || |||||| ||||||||    
T  26932438 ttctagagtattatttt-tctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaattg 26932505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 21375700 - 21375645
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| |||||| ||||| |||||||||||||||| ||||||||    
T  21375700 ttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaattg 21375645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 1309414 - 1309356
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| | | ||||| |||| |||||||| ||||||||||||||||    
T  1309414 tattattttttctttaatgataaacaaatcaattgttgattatgataatttgataaaat 1309356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 38369965 - 38370027
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||  ||||| ||| || ||| |||||||||||||||||||||| ||||||    
T  38369965 aaagtattatttttttattaatgaaaaacgaacaaatagttgattaggataatttggtaaaat 38370027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 41645330 - 41645391
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||||||||||    
T  41645330 aaagtattatttt-tctttaatgaaaaacaaaccaatggttgattaaaataatttgataaaat 41645391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 13974376 - 13974429
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||  || |||||| |||||||||||||||||||||| ||||||    
T  13974376 ttttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaat 13974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 27600499 - 27600551
Alignment:
Q  311 ttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||| |||||| ||| ||||| ||||||||||||||||||||||| |||||||    
T  27600499 ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaatt 27600551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 13761823 - 13761878
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| | ||||||||||||||||| ||||||||  ||||||||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaattg 13761878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 39504828 - 39504883
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||| | ||| |||||| ||||||||||||| |||||||| ||||||||    
T  39504828 ttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaattg 39504883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 21634189 - 21634266
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| ||||||||| |||||||| ||| ||||||||||| ||||||| |||| |||| ||||||    
T  21634189 tatatacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21634266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 21642436 - 21642513
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| ||||||||| |||||||| ||| ||||||||||| ||||||| |||| |||| ||||||    
T  21642436 tatatacactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaat 21642513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 18719512 - 18719430
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| |||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  18719512 atactatatacactattttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 18719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 19636602 - 19636666
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  19636602 aaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattg 19636666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 19835195 - 19835259
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  19835195 aaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaattg 19835259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 29396739 - 29396675
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  29396739 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 29396675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 43971573 - 43971644
Alignment:
Q  291 attatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||    
T  43971573 attacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 43971644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 10195752 - 10195830
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  10195752 tatatacactacttccaaaatattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 10195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 37038829 - 37038767
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  37038829 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 37038767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 441290 - 441226
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||    
T  441290 aaagtattattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaattg 441226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 4288770 - 4288706
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  4288770 aaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattg 4288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 32228070 - 32228006
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  32228070 aaagtattattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaattg 32228006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 38926700 - 38926764
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  38926700 aaagtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaattg 38926764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 33482305 - 33482234
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    ||||||||||||||| ||||||||| |||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  33482305 tatatacattatttcgaaagtattaatttttccttaataaaaaacaaaccaaaagttgaataggataatttg 33482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 12393992 - 12393914
Alignment:
Q  286 tatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||| |||||  |||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  12393992 tatacactattttcaaagtaatattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaattg 12393914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 33055964 - 33056046
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||  || ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  33055964 atactatatacactactttcaatgtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 33056046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 29808906 - 29808971
Alignment:
Q  300 aaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  29808906 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 29808971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 4133116 - 4133180
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||| ||||||||    
T  4133116 aaagtattattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaattg 4133180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 6220459 - 6220399
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6220459 tattattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaattg 6220399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 12342191 - 12342251
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||    
T  12342191 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 12342251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 1423289 - 1423348
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||    
T  1423289 tattattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaatt 1423348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 8540127 - 8540194
Alignment:
Q  296 ttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||| ||||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  8540127 ttctaaaatattatttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaat 8540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 27726493 - 27726417
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| ||| ||| |||||||||||  ||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  27726493 tatatacattacttccaaattattatttttt--ttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 27726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 30855208 - 30855263
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  30855208 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 30855263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 45081959 - 45081896
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||    
T  45081959 aaagcattattttttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaatt 45081896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 34546198 - 34546144
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  34546198 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaatt 34546144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 43480929 - 43480875
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  43480929 aaagtattattttttctttaatgaaaaacaaaccaatagtttattaggataattt 43480875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 4658313 - 4658229
Alignment:
Q  280 atactatatacattatttctaaagtatta--ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||  |||||||||  ||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||    
T  4658313 atactatatacactactttcaaagtattaatttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 4658229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 36106459 - 36106398
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||| |||||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  36106459 gtattattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaattg 36106398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 8774147 - 8774210
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  8774147 aaagtattatttt-tctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattg 8774210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 8789488 - 8789425
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  8789488 aaagtattattttt-ctttaatgaaaaataaaccaatagttgattaggataatttggtaaaattg 8789425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 16807576 - 16807512
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| ||||| ||||||||||| ||| |||||| ||||||||||||| |||||||||||||||||    
T  16807576 aaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattg 16807512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 16846857 - 16846793
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||| ||||| ||||||||||| ||| |||||| ||||||||||||| |||||||||||||||||    
T  16846857 aaagaattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaattg 16846793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 27964282 - 27964222
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||    
T  27964282 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 27964222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 42743123 - 42743186
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||    
T  42743123 aaagtatt-ttttttctttaataaaaaacaaatcaataattgattaggataatttggtaaaattg 42743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 355
Target Start/End: Original strand, 11132624 - 11132699
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    ||||||||||||||| ||  ||| |||||||||||||||||| ||| |||||| ||||||||||||  ||||||||    
T  11132624 atactatatacattactttcaaaatattattttttctttaatgaaaaacaaacaaatagttgattataataatttg 11132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 13562088 - 13562151
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||  |||||||    
T  13562088 aaagtattattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaatt 13562151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 40608666 - 40608603
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||||||||||||||||| ||| ||||||  ||||||||||||||||||||| ||||||    
T  40608666 taaaatattattttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaat 40608603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 11188305 - 11188247
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||| ||| ||||||    
T  11188305 tattattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaat 11188247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 18579240 - 18579302
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttga 342  Q
    |||||||||||| || ||| ||||||| |||||||||||||| ||| ||||||||||||||||    
T  18579240 atactatatacactacttccaaagtataattttttctttaatgaaaaacaaaccaatagttga 18579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 25383544 - 25383480
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| | |||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||    
T  25383544 aaagtattactatttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaattg 25383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 42004985 - 42005048
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||| | ||||||    
T  42004985 aaagtattattgtttttttaataaaa-acaaacaaatagttgattaggataatttggtgaaattg 42005048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 7872836 - 7872774
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| ||||| ||||||| ||| || |||||||| ||||||    
T  7872836 aaagtattattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaat 7872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 19469601 - 19469678
Alignment:
Q  284 tatatacattatttctaaagtattatttt--ttctttaataaaagacaaaccaatagttgattaggataatttgataa 359  Q
    ||||||||||| ||| |||||||||||||  ||||||||| ||| ||||| ||||| ||||||| |||||||| ||||    
T  19469601 tatatacattagttccaaagtattattttttttctttaatgaaaaacaaatcaataattgattacgataatttaataa 19469678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 36685796 - 36685739
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| || ||| ||||||||||| ||||||||||||||||| ||||||    
T  36685796 tattattttttctttgatgaaa-acaaaccaataattgattaggataatttggtaaaat 36685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 18717169 - 18717234
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||| |||||| || |||||| ||| ||||||||||| ||||||||||||||||  ||||||||    
T  18717169 taaagttttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaattg 18717234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 19164450 - 19164495
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgatta 345  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||    
T  19164450 aaagtattattttttctttaatgaataacaaaccaatagttgatta 19164495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 34455793 - 34455846
Alignment:
Q  308 attttttctttaataaaagacaaaccaatagttgattaggataatttgataaaa 361  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||| |||||    
T  34455793 attttttctttaataaaaattaaaccagtagttgattaggataatttggtaaaa 34455846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 7028892 - 7028847
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaa 325  Q
    |||||||||||| || ||  ||||||||||||||||||||||||||    
T  7028892 atactatatacactactttcaaagtattattttttctttaataaaa 7028847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 366
Target Start/End: Original strand, 50623173 - 50623244
Alignment:
Q  296 ttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  50623173 ttctaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaattgat 50623244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 19878742 - 19878806
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  19878742 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 19878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 52957853 - 52957789
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  52957853 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 52957789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 28734692 - 28734755
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  28734692 aaagtattattttttctttaatgaaaaacaaaccaataattgattaggataatttgataaaatt 28734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 30261332 - 30261414
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||  |||||||||||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||    
T  30261332 atactatatacattactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaat 30261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 366
Target Start/End: Complemental strand, 40345410 - 40345344
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  40345410 aaagtattgtattttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaattgat 40345344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 37654503 - 37654568
Alignment:
Q  300 aaagtattattttttctttaat-aaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  37654503 aaagtattattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaattg 37654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 2728461 - 2728397
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||    
T  2728461 aaagtattattttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaattg 2728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 20448133 - 20448197
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||||||||    
T  20448133 aaagtattattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaattg 20448197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 41920372 - 41920308
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||    
T  41920372 aaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattg 41920308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 42605666 - 42605730
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  42605666 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattg 42605730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 45043647 - 45043587
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  45043647 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 45043587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 49089557 - 49089621
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  49089557 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattg 49089621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 52848117 - 52848053
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  52848117 aaagtattattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaattg 52848053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 54042246 - 54042182
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  54042246 aaagtattattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaattg 54042182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 6991342 - 6991271
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||| |||||  |||||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  6991342 tatatacactattttcaaagtattattttttctttaataaaaaataaaccaatagttgactaggataatttg 6991271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 46392126 - 46392063
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||    
T  46392126 aaagtattattttttatttaatagaaaacaaaccaatagttgattaggataatttggtaaaatt 46392063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 355
Target Start/End: Original strand, 50203151 - 50203222
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||    
T  50203151 tatatacattacttcaaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttg 50203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 10573238 - 10573156
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| |||||||||||||||| ||||| |||  |||| ||||||||||||||||||||||| ||||||    
T  10573238 atactatatacaatacttccaaagtattattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaat 10573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 52162177 - 52162259
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||| ||||| || ||| |||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  52162177 atactaaatacactagttccaaagtattattttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaat 52162259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 1819656 - 1819720
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||| ||||||||    
T  1819656 aaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaattg 1819720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 19930812 - 19930872
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  19930812 tattatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaattg 19930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 29370698 - 29370761
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  29370698 aaagtattatttt-tctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 29370761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 52253945 - 52254005
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |||||||    
T  52253945 gtattattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaatt 52254005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 53814560 - 53814496
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||| ||||||||    
T  53814560 aaagtattattttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaattg 53814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 362
Target Start/End: Complemental strand, 19451289 - 19451206
Alignment:
Q  279 tatactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||||||| || ||| |||||||||||||||||||||| ||| ||||||||||| ||||||||| || |||| ||||||    
T  19451289 tatagtatatacactacttccaaagtattattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaat 19451206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 24940983 - 24941038
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  24940983 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 24941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 44571928 - 44571865
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||| |||||||    
T  44571928 aaagtattattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaatt 44571865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 45839714 - 45839793
Alignment:
Q  284 tatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| ||| ||||||||||||| ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||    
T  45839714 tatatacattacttccaaagtattatttttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaat 45839793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 47817811 - 47817894
Alignment:
Q  280 atactatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| ||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||| ||| ||||||    
T  47817811 atactatatacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaat 47817894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 47458469 - 47458388
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| || ||||||||||||||| ||||||  ||| ||||||  ||||||||||||||||||||| ||||||    
T  47458469 atactatatacattacttttaaagtattattttt-ctttaacgaaaaacaaacatatagttgattaggataatttggtaaaat 47458388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 49080539 - 49080477
Alignment:
Q  301 aagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||| |||||||    
T  49080539 aagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaatt 49080477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 2493184 - 2493260
Alignment:
Q  288 tacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| || ||||||| ||||||||||| ||| |||| ||||||||||||||||||||| || ||||||||    
T  2493184 tacattacttccaaggtattatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaattg 2493260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 27653772 - 27653832
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||||||||||| ||||||||    
T  27653772 tattattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaattg 27653832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 29519592 - 29519524
Alignment:
Q  296 ttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| ||| || ||||||||||| |||||  ||||||| ||||||||    
T  29519592 ttctaaagtattattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaattg 29519524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 39984911 - 39984975
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| ||| |||||||||| ||| ||||| |||||||||||||| |||||||||||||||||    
T  39984911 aaagtataattgtttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaattg 39984975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 56373638 - 56373574
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||||||||||||||| ||||||||    
T  56373638 aaagtattattttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaattg 56373574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 8971119 - 8971198
Alignment:
Q  284 tatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||||||||||||| ||||||||| ||| |||||||||||||| |||| ||||||||| ||||||    
T  8971119 tatatacactacttccaaagtattatttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaat 8971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 18430084 - 18430147
Alignment:
Q  301 aagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||||  ||| |||||| |||||||||||| ||||||||| ||||||||    
T  18430084 aagtattattttttctttaaagaaaaacaaacgaatagttgattatgataatttggtaaaattg 18430147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 34316316 - 34316378
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||| |||||| |||||||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  34316316 aaaggattattctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 44868331 - 44868253
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| ||| ||| ||||||||| ||||||||  || ||||| |||||||||||||||| |||||| ||||||    
T  44868331 tatatacattacttccaaaatattattttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaat 44868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 38991824 - 38991762
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||| ||||||||||  ||||||||||||||||| ||||||||    
T  38991824 aaagtattattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaattg 38991762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 30780084 - 30780029
Alignment:
Q  300 aaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||    
T  30780084 aaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataattt 30780029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 41496302 - 41496353
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||| ||||| ||||||| |||||| ||||||||||||||||||||||    
T  41496302 tattatttattcttcaataaaaaacaaacaaatagttgattaggataatttg 41496353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 34413627 - 34413556
Alignment:
Q  284 tatatacattatttctaaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||| || ||||||| ||||||||||| ||||||| ||| |  ||||||||||||||||| |||||||    
T  34413627 tatatacactacttctaaaatattatttttttctttaatgaaaaaagaaccaatagttgattagcataattt 34413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 40010926 - 40010871
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||| || ||||| |||||||| |||||||||||||  ||||||||    
T  40010926 ttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaattg 40010871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 11364319 - 11364381
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| |||| ||| ||| ||||||||||| || |||| ||||||||| ||||||    
T  11364319 aaagtattattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaat 11364381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 620261 - 620177
Alignment:
Q  280 atactatatacattatttctaaagtattatttttt--ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||| ||||||||| ||| |||||||||||||||   |||||  ||| ||||| |||||||||||||  |||||||| ||||||    
T  620261 atactctatacattacttccaaagtattatttttttcttttaaagaaaaacaaatcaatagttgattaaaataatttggtaaaat 620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 44061096 - 44061141
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||| |||||| ||| ||||||||||||||||||| ||||||||    
T  44061096 ttttttatttaatgaaaaacaaaccaatagttgattatgataattt 44061141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 12459398 - 12459316
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||| |||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  12459398 atactatatacattacttccaaagtattgttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 12459316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 234128 - 234192
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  234128 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 16128086 - 16128006
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaa 360  Q
    |||||||||||| || ||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||    
T  16128086 atactatatacactacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattaggataaattgataaa 16128006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31443504 - 31443440
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  31443504 aaagtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaattg 31443440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 3988823 - 3988741
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||| | |||||| |||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||    
T  3988823 atactatatatactatttcaaaagtattattttttctttaatgaaaaacaaacaaatagttgattatgataatttggtaaaat 3988741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 8957865 - 8957916
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8957865 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttg 8957916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 8961492 - 8961441
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8961492 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttg 8961441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 9940745 - 9940803
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  9940745 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 9940803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 364
Target Start/End: Complemental strand, 10540556 - 10540471
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| ||| || ||| |||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| |||||||||    
T  10540556 atactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataatttaataaaattg 10540471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 29713465 - 29713412
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatt 353  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  29713465 aaagtattattttttctttaataaaaaacaaactaatagttgattaggataatt 29713412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 17552327 - 17552243
Alignment:
Q  280 atactatatacattatttctaaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||| || ||| ||| ||||||||||| ||||||| ||| |||||||||| |||||||||||||||||| |||||||    
T  17552327 atactatatacactacttccaaaatattatttttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaatt 17552243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 24163773 - 24163709
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  24163773 aaagtattattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaattg 24163709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 366
Target Start/End: Original strand, 1134998 - 1135085
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    ||||||||| ||| || ||| ||| |||||||||||||||||  ||| |||||| |||||||||||||||||||||| ||||||||||    
T  1134998 atactatattacactacttccaaaatattattttttctttaaagaaaaacaaacaaatagttgattaggataatttggtaaaattgat 1135085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 1502832 - 1502750
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| ||| ||||||||||| |||||| ||| |||||||||||||| |||| ||||||||| ||||||    
T  1502832 atactatatacactacttccaaaatattattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaat 1502750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 23259384 - 23259320
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||| | |||  |||| ||||||||||||||||||||||| ||||||||    
T  23259384 aaagtattattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaattg 23259320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 359
Target Start/End: Complemental strand, 32619885 - 32619825
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataa 359  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||    
T  32619885 taaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatttaataa 32619825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 577138 - 577209
Alignment:
Q  284 tatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    |||||||| || ||| ||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  577138 tatatacactacttccaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataattt 577209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 17828356 - 17828438
Alignment:
Q  280 atactatataca-ttatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || |||| ||||||||| |||||||||||| ||| |||||||||| |||||||| ||||||||| ||||||    
T  17828356 atactatatacacttctttc-aaagtattactttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaat 17828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 19675081 - 19675136
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||    
T  19675081 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaattg 19675136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 20226299 - 20226218
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||| ||||| || ||| || ||||||||| ||||||||| ||| ||||| |||||||||||||| |||||||| ||||||    
T  20226299 tactaaatacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 20226218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 22120283 - 22120202
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||| ||||| || ||| || ||||||||| ||||||||| ||| ||||| |||||||||||||| |||||||| ||||||    
T  22120283 tactaaatacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaat 22120202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 17267683 - 17267611
Alignment:
Q  284 tatatacattatttctaaagtattatt-ttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||| ||||| |||||||||||| |||||||| |||||| |||||| |||| |||||||| ||||||||    
T  17267683 tatatacactatttttaaagtattatttttttctttgataaaaaacaaactaatatttgattagaataatttg 17267611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 18737143 - 18737087
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaa 360  Q
    |||||||||||||||||| ||| | ||| |||||||| |||||||||||||||||||    
T  18737143 tattattttttctttaatgaaaaataaaacaatagttaattaggataatttgataaa 18737087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 13011400 - 13011345
Alignment:
Q  307 tattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||| ||| ||||||| ||||||||||| ||||||||| ||||||    
T  13011400 tattttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaat 13011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 10520450 - 10520385
Alignment:
Q  299 taaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||| |||||| | | |||| |||||| ||||||| ||||||||| ||||||||    
T  10520450 taaagtattattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaattg 10520385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 24555999 - 24555922
Alignment:
Q  288 tacattatttctaaagtattattttttcttt-aataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||  |||||||| |||||| ||| ||| ||| ||||| ||||||||||||| ||||||||| ||||||||    
T  24555999 tacattattttcaaagtattttttttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattg 24555922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 32193775 - 32193835
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagtt 340  Q
    |||||||||||| || ||| |||||||||| |||||||||||  || ||||||||||||||    
T  32193775 atactatatacactacttccaaagtattatcttttctttaatgtaaaacaaaccaatagtt 32193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 12322966 - 12322881
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaat---aaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| |||||||| | |||||||||||   |||| | ||| |||||||| |||||||||||||| ||||||    
T  12322966 atactatatacactacttccaaagtattgtgttttctttaatgaaaaaaaaaaaatcaatagttaattaggataatttggtaaaat 12322881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 32193930 - 32193965
Alignment:
Q  327 acaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||||||||||||||||||| ||||||    
T  32193930 acaaaccaatagttgattaggataatttggtaaaat 32193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 3847745 - 3847798
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatt 353  Q
    |||| ||||||||||||||||| ||| | ||| ||||||||||||| |||||||    
T  3847745 aaaggattattttttctttaattaaaaataaatcaatagttgattaagataatt 3847798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 13503893 - 13503841
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||||||| ||||||    
T  13503893 ttttttctttaatgaaaaacaaac-aatagtttattaggataatttggtaaaat 13503841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 21271452 - 21271400
Alignment:
Q  310 tttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| ||  ||||| |||||||||||||||||| |||| ||||||    
T  21271452 tttttctttaatgaagaacaaatcaatagttgattaggatactttggtaaaat 21271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 29567969 - 29568051
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||    
T  29567969 atactatatacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 29568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 34110621 - 34110684
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  34110621 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttgattaaatt 34110684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 26595147 - 26595065
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| |||||| |||| |||| |||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||    
T  26595147 atactatatacactatttccaaagaattaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaat 26595065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 27209066 - 27209144
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  27209066 tatatacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 27209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 31699367 - 31699285
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| |||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  31699367 atactataaacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 31699285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 46286896 - 46286814
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaa 361  Q
    ||||||||| ||| ||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  46286896 atactatattacactatttttaaagtatcattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaa 46286814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 364
Target Start/End: Complemental strand, 49468789 - 49468704
Alignment:
Q  280 atactatat-acattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||| ||| || ||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  49468789 atactatattacactacttccaaaggattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 49468704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 15823128 - 15823192
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  15823128 aaagtattattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaattg 15823192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 32806995 - 32806931
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  32806995 aaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaattg 32806931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 48009104 - 48009167
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  48009104 aaagtattattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaatt 48009167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 25560950 - 25560868
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || ||| ||| |||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||    
T  25560950 atactatatacactacttccaaaatattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaat 25560868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 38530894 - 38530832
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  38530894 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaattg 38530832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 5463673 - 5463733
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||||    
T  5463673 tattattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaattg 5463733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 10842874 - 10842938
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||| ||||||||| ||||||||    
T  10842874 aaagtattattttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaattg 10842938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 9915537 - 9915592
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttg 355  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  9915537 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttg 9915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 8895089 - 8895011
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| |||||  ||| ||||||||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  8895089 tatatacactattttcaaaatattattttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 8895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 52125191 - 52125129
Alignment:
Q  302 agtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||||    
T  52125191 agtattattttttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaattg 52125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 31798683 - 31798748
Alignment:
Q  300 aaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||    
T  31798683 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaattg 31798748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 25151903 - 25151967
Alignment:
Q  300 aaagtattattttttctttaat-aaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| |||||||    
T  25151903 aaagtattattttttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaatt 25151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 31491827 - 31491763
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||| |||||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||    
T  31491827 aaagtataattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaattg 31491763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 48025311 - 48025247
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||||||  ||| |||||| ||||||| |||||||||||||| ||||||||    
T  48025311 aaagtattattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaattg 48025247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 1740688 - 1740633
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||    
T  1740688 ttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaattg 1740633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 28538277 - 28538360
Alignment:
Q  280 atactatatacattatttctaaagtattatttt-ttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| |||||  || |||||||||| ||||||||| ||| | ||||||||||||||||| ||||||||| ||||||    
T  28538277 atactatatacactattttcaatgtattatttttttctttaatgaaaaataaaccaatagttgattatgataatttggtaaaat 28538360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 44108704 - 44108759
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||    
T  44108704 ttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaattg 44108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 8989693 - 8989635
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||||| ||| |||||||||||||||||||  |||||||| ||||||    
T  8989693 tattattttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaat 8989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 43759432 - 43759490
Alignment:
Q  306 ttattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||| ||| || || |||||||| |||||||||||||||||||||||    
T  43759432 ttattttttctttaatgaaaaaccaatcaatagttaattaggataatttgataaaattg 43759490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 50094333 - 50094387
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||| |||||||    
T  50094333 ttttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaatt 50094387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 24611577 - 24611512
Alignment:
Q  300 aaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||  ||||||||    
T  24611577 aaagtattatttttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaattg 24611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 46046067 - 46046131
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||| ||||||||| |||  ||||  |||||||||||||||||||||| ||||||||    
T  46046067 aaagtattatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaattg 46046131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 49426466 - 49426410
Alignment:
Q  310 tttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattgat 366  Q
    ||||| |||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  49426466 tttttttttaatgaagaacaaaccaatagttgattaggataatttggtaaaattgat 49426410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 362
Target Start/End: Complemental strand, 7191285 - 7191202
Alignment:
Q  280 atactatatacattatttctaaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||| || || |||| ||||||||||| ||||||  ||| | |||| |||||||||||||||||||||| ||||||    
T  7191285 atactatatacactacttttaaaatattatttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaat 7191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 15573716 - 15573771
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||| ||| |||||||||||| | |||||||||||||| ||||||||    
T  15573716 ttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaattg 15573771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 5072 - 5134
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||||||||||| | |   ||| ||||||||||||||||||||||||||||| ||||||    
T  5072 aaagtattattttttcatcagcgaaaaacaaaccaatagttgattaggataatttggtaaaat 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 5225883 - 5225821
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||| |||||||||||| ||| | |||||||||||| |||| ||||||||| ||||||    
T  5225883 aaagtattactttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaat 5225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 18794616 - 18794538
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| |||| |||||||||||||  || |||||| ||||||||||||| |||||||| ||||||    
T  18794616 tatatacactacttccaaaatattcttttttctttaatggaaaacaaactaatagttgattagaataatttggtaaaat 18794538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 46554871 - 46554916
Alignment:
Q  280 atactatatacattatttctaaagtattattttttctttaataaaa 325  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||    
T  46554871 atactatatacactacttccaaagtattattttttctttaataaaa 46554916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 362
Target Start/End: Complemental strand, 46271081 - 46271018
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaata-gttgattaggataatttgataaaat 362  Q
    |||||||||||||||||||||| ||| |||||| |||| |||||||| |||||| || ||||||    
T  46271081 aaagtattattttttctttaatgaaaaacaaactaatacgttgattacgataatctggtaaaat 46271018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 49900815 - 49900760
Alignment:
Q  300 aaagtattatttttt-ctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||||||| ||||||  ||| | ||||||||||||||||||||||||||    
T  49900815 aaagtattatttttttctttaaagaaaaataaaccaatagttgattaggataattt 49900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 35847990 - 35847929
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    ||||||||||||||||||| | |||   |||| ||||||||||||| ||||||||| ||||||||    
T  35847990 aaagtattattttttctttgaaaaa---caaatcaatagttgattaagataatttggtaaaattg 35847929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 52066338 - 52066284
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataatttgataaaatt 363  Q
    |||||| |||||| ||| ||||| ||||||||||||| ||||||||| |||||||    
T  52066338 ttttttgtttaatgaaaaacaaatcaatagttgattaagataatttggtaaaatt 52066284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 18330 - 18252
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| |||||  ||||||||||||| |||||||| ||| |||||||||||||||||||  |||||||||||||||    
T  18330 tatatacactattttcaaagtattattttatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaat 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 24799 - 24735
Alignment:
Q  300 aaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||    
T  24799 aaagtattatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaattg 24735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 4218 - 4296
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || |||||||||||| ||||| ||||||||||| |||||  |||||||||| ||||||||||| ||||||    
T  4218 tatatacactacttctaaagtattgtttttcctttaataaaaaacaaattaatagttgataaggataatttggtaaaat 4296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 362
Target Start/End: Complemental strand, 10033 - 9952
Alignment:
Q  281 tactatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    ||||||||||| || ||| ||| |||||||||||||||||  ||| |||||| |||||||||||| ||||||||| ||||||    
T  10033 tactatatacaatacttcaaaaatattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaat 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 9697 - 9637
Alignment:
Q  304 tattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||||||||||||| ||| ||||  ||||||||||||| ||||||||| ||||||||    
T  9697 tattattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaattg 9637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 21135 - 21076
Alignment:
Q  305 attattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||||| | |||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  21135 attattttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaattg 21076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 362
Target Start/End: Original strand, 4642 - 4720
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||| |||||| ||| ||||||||||| ||||| |||||||||||||||||| |||| ||||||    
T  4642 tatatacactacttccaaaatattatatttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaat 4720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 9647 - 9692
Alignment:
Q  309 ttttttctttaataaaagacaaaccaatagttgattaggataattt 354  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9647 ttttttctttaatgaaaaacaaaccaatagttgattaggataattt 9692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 62730 - 62791
Alignment:
Q  303 gtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaattg 364  Q
    |||||| || ||||||||| ||| |||||||||||||||||||||| |||||| ||||||||    
T  62730 gtattacttcttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaattg 62791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 647 - 569
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||||||||||||||  |||||| ||| | ||| ||||||||||||| ||||||||| ||||||    
T  647 tatatacactacttccaaagtattatttttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaat 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 762 - 684
Alignment:
Q  284 tatatacattatttctaaagtattattttttctttaataaaagacaaaccaatagttgattaggataatttgataaaat 362  Q
    |||||||| || ||| ||||  || ||||||||||||| ||| ||| | ||||||||||||| ||||||||| ||||||    
T  762 tatatacactaattccaaagacttgttttttctttaatgaaaaacatatcaatagttgattaagataatttggtaaaat 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University